Research Unit
Sustainable Ecotechnologies
- In order to produce resource- and energy-efficiently, cycles must be closed.
- The consumption of fossil organic and scarce inorganic raw materials must be reduced and fossil energy sources must be replaced by renewable energies.
- Harmful substances must not enter the environment unhindered. Where this does happen, technologies must be available to eliminate them.
- Urban infrastructure must adapt our cities to the conditions of a warmer climate.
Sustainable Circular Economy – The focus here is on sustainable biotechnological production of energy sources (hydrogen, biogas, liquid fuels) and chemical building blocks for the polymer, chemical and pharmaceutical industries from renewable resources. Processes are used that require minimal land use. At the same time, biotechnological options are being developed to minimize anthropogenic emissions in the spirit of a circular bioeconomy.
This research direction creates and bundles the RU's biotechnological know-how and strives for technology maturity that allows transfer to business and industrial players. The integration of industrial partners mainly takes place via established networks and joint third-party funded projects (see e.g. RWTec). It will be systematically expanded with the help of the UFZ's Knowledge and Technology Transfer Department in order to ensure access to research and development results for companies.
Creating a climate-resilient, low-impact, and stressor-minimized human environment in rural and urban areas requires knowledge of the behavior of chemicals in natural and engineered systems as well as technologies for their removal. Climate-resilient, energy- and water-efficient cities require technologies that close local water cycles and improve microclimate while reducing the energy demand of urban infrastructures.
The development and implementation of such technologies requires the early involvement of practice partners from politics, administration and (municipal) companies. Successful examples (see e.g. Leipzig BlauGrün) serve as a model for future co-design processes along this research direction.
The research directions are organized in the integration platform (IP) 'Tapping nature's potential - TapNature' (IP TapNature) and contribute to Topics 7, 5 and 9 of the current research program 'Changing Earth: Sustaining our Future'.
News
Highlights from the Research Unit
Consortium of Helmholtz-Centre for Environmental Research GmbH – UFZ and Deutsches Biomasse Forschungszentrum – DBFZ will collaborate with Cosun Beet Company to further develop the Capraferm® process and realize project idea of turning waste to value by converting beet leaves into carboxylic acids.
Further information
2025 (1)
Understanding the mechanism of microplastic-associated antibiotic resistance genes in aquatic ecosystems: Insights from metagenomic analyses and machine learning
Water Res. 268, Part A , art. 122570 10.1016/j.watres.2024.1225702024 (150)
Investigating sediment sources using compound-specific stable isotopes and conventional fingerprinting methods in an agricultural loess catchment
Catena 246 , art. 108336 10.1016/j.catena.2024.108336
Genome-centric analyses of 165 metagenomes show that mobile genetic elements are crucial for the transmission of antimicrobial resistance genes to pathogens in activated sludge and wastewater
Microbiol. Spectr. 12 (3), e02918-23 10.1128/spectrum.02918-23
Variovorax sp. strain P1R9 applied individually or as part of bacterial consortia enhances wheat germination under salt stress conditions
Sci. Rep. 14 , art. 2070 10.1038/s41598-024-52535-0
Sequential anaerobic-aerobic treatment enhances sulfamethoxazole removal: From batch cultures to observations in a large-scale wastewater treatment plant
Environ. Sci. Technol. 58 (28), 12609 - 12620 10.1021/acs.est.4c00368
Microbe-assisted rhizodegradation of hydrocarbons and growth enhancement of wheat plants in hydrocarbons contaminated soil
Int. J. Environ. Sci. Technol. 21 (3), 3169 - 3184 10.1007/s13762-023-05174-3
Electrical-energy storage into chemical-energy carriers by combining or integrating electrochemistry and biology
Energy Environ. Sci. 17 (11), 3682 - 3699 10.1039/D3EE01091K
Microbial activity, community composition and degraders in the glyphosate-spiked soil are driven by glycine formation
Sci. Total Environ. 907 , art. 168206 10.1016/j.scitotenv.2023.168206
Nitrogen-fertilizer addition to an agricultural soil enhances biogenic non-extractable residue formation from 2-13C,15N-glyphosate
Sci. Total Environ. 918 , art. 170643 10.1016/j.scitotenv.2024.170643
BioDeepfuse: a hybrid deep learning approach with integrated feature extraction techniques for enhanced non-coding RNA classification
RNA Biol. 21 (1), 1 - 12 10.1080/15476286.2024.2329451
Generating colloidal Fe/C composites via hydrothermal carbonization – A critical study
Sep. Purif. Technol. 335 , art. 126082 10.1016/j.seppur.2023.126082
High performance of the metal organic framework CPO-27 for toxic gas capture (NO2)
Eur. J. Inorg. Chem. 27 (29), e202400253 10.1002/ejic.202400253
Strategies found not to be suitable for stabilizing high steroid hydroxylation activities of CYP450 BM3-based whole-cell biocatalysts
PLOS One 19 (9), e0309965 10.1371/journal.pone.0309965
Efficiency aspects of regioselective testosterone hydroxylation with highly active CYP450-based whole-cell biocatalysts
Microb. Biotechnol. 17 (1), e14378 10.1111/1751-7915.14378
Evaluation of the robustness under alkanol stress and adaptability of members of the new genus Halopseudomonas
Microorganisms 12 (11), art. 2116 10.3390/microorganisms12112116
Exploring engineered vesiculation by Pseudomonas putida KT2440 for natural product biosynthesis
Microb. Biotechnol. 17 (1), e14312 10.1111/1751-7915.14312
Adsorption of uranium (VI) complexes with polymer-based spherical activated carbon
Water Res. 249 , art. 120825 10.1016/j.watres.2023.120825
Modeling urban stormwater and irrigation management with coupled blue-green infrastructure in the context of climate change
Blue-Green Syst. 6 (1), 100 - 113 10.2166/bgs.2024.101
Stable isotope probing-nanoFTIR for quantitation of cellular metabolism and observation of growth-dependent spectral features
Small 20 (36), art. 2400289 10.1002/smll.202400289
Microbial electrochemistry and technology capacity building challenges—focus on Latin America & Caribbean and Africa
J. Solid State Electrochem. 28 (3-4), 1023 - 1039 10.1007/s10008-023-05761-x
Integrating viruses into soil food web biogeochemistry
Nat. Microbiol. 9 (8), 1918 - 1928 10.1038/s41564-024-01767-x
Ex-situ electrochemical characterisation of fixed-bed denitrification biocathodes: A promising strategy to improve bioelectrochemical denitrification
Chemosphere 347 , art. 140699 10.1016/j.chemosphere.2023.140699
Pasture-crop rotations modulate the soil and rhizosphere microbiota and preserve soil structure supporting oat cultivation in the Pampa biome
Soil Biol. Biochem. 195 , art. 109451 10.1016/j.soilbio.2024.109451
In situ anchoring of bimetal (Cu, Fe) sulfides featured by sulfur vacancy and phosphorus doping within porous carbon nanocubes derived from Prussian blue analogs to activate peroxymonosulfate for the efficient degradation of organic pollutants
Chem. Eng. J. 498 , art. 155252 10.1016/j.cej.2024.155252
Microbial diversity and oil biodegradation potential of northern Barents Sea sediments
J. Environ. Sci. 146 , 283 - 297 10.1016/j.jes.2023.12.010
Unbalanced predatory communities and a lack of microbial degraders characterize the microbiota of a highly sewage-polluted Eastern-Mediterranean stream
FEMS Microbiol. Ecol. 100 (6), fiae069 10.1093/femsec/fiae069
Influence of the 3D architecture and surface roughness of SiOC anodes on bioelectrochemical system performance: a comparative study of freeze-cast, 3D-printed, and tape-cast materials with uniform composition
Mater. Renew. Sustain. Energy 13 (1), 81 - 96 10.1007/s40243-023-00253-4
Integrated induction of silver resistance determinants and production of extracellular polymeric substances in Cupriavidus metallidurans BS1 in response to silver ions and silver nanoparticles
Chemosphere 366 , art. 143503 10.1016/j.chemosphere.2024.143503
Microbial electricity-driven anaerobic phenol degradation in bioelectrochemical systems
Environ. Sci. Ecotechnol. 17 , art. 100307 10.1016/j.ese.2023.100307
Datathons: fostering equitability in data reuse in ecology
Trends Microbiol. 32 (5), 415 - 418 10.1016/j.tim.2024.02.010
Laccase-mediated degradation of petroleum hydrocarbons in historically contaminated soil
Chemosphere 348 , art. 140733 10.1016/j.chemosphere.2023.140733
Cable bacteria skeletons as catalytically active electrodes
Angew. Chem.-Int. Edit. 63 (6), e202312647 10.1002/anie.202312647
Climate induced microbiome alterations increase Cd bioavailability in agricultural soils
Commun. Earth Environ. 5 , art. 637 10.1038/s43247-024-01794-w
Biocalorimetry-aided monitoring of fungal pretreatment of lignocellulosic agricultural residues
Appl. Microbiol. Biotechnol. 108 (1), art. 394 10.1007/s00253-024-13234-y
Author correction: Effect of model methanogens on the electrochemical activity, stability, and microbial community structure of Geobacter spp. dominated biofilm anodes
npj Biofilms Microbiomes 10 , art. 41 10.1038/s41522-024-00513-9
Effect of model methanogens on the electrochemical activity, stability, and microbial community structure of Geobacter spp. dominated biofilm anodes
npj Biofilms Microbiomes 10 , art. 17 10.1038/s41522-024-00490-z
Reductive dehalogenase of Dehalococcoides mccartyi strain CBDB1 reduces cobalt-containing metal complexes enabling anodic respiration
Front. Microbiol. 15 , art. 1457014 10.3389/fmicb.2024.1457014
Submarine groundwater discharge into a semi-enclosed coastal bay of the southern Baltic Sea: A multi-method approach
Oceanologia 66 (1), 111 - 138 10.1016/j.oceano.2024.01.001
Sources, compositions, spatio-temporal distributions, and human health risks of bioaerosols: A review
Atmos. Res. 305 , art. 107453 10.1016/j.atmosres.2024.107453
BioPrediction-RPI: Democratizing the prediction of interaction between non-coding RNA and protein with end-to-end machine learning
Comp. Struct. Biotechnol. J. 23 , 2267 - 2276 10.1016/j.csbj.2024.05.031
Leaching of tire particles and simultaneous biodegradation of leachables
Water Res. 253 , art. 121322 10.1016/j.watres.2024.121322
Design, calibration and testing of a novel isothermal calorespirometer prototype
Thermochim. Acta 738 , art. 179785 10.1016/j.tca.2024.179785
Improving waste management strategies in the food sector: case studies from Spain, Tunisia and Hong Kong
J. Mater. Cycles Waste Manag. 26 (4), 2265 - 2277 10.1007/s10163-024-01965-z
A guide for JHM authors focusing on advanced oxidation and reduction processes for environmental applications
J. Hazard. Mater. 476 , art. 135263 10.1016/j.jhazmat.2024.135263
Editorial from the new Editor-in-Chief Matthias Gehre
Isot. Environ. Health Stud. 60 (3), 227 - 228 10.1080/10256016.2024.2357209
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
Geosci. Model Dev. 17 (2), 881 - 898 10.5194/gmd-17-881-2024
Mycelia migratory bacteria in compost and compost–amended rhizosphere soil in a table grape orchard
J. Soil Sci. Plant Nutr. 24 (3), 4666 - 4680 10.1007/s42729-024-01862-2
Granulation compared to co-application of biochar plus mineral fertilizer and its impacts on crop growth and nutrient leaching
Sci. Rep. 14 , art. 16555 10.1038/s41598-024-66992-0
Arsenic immobilization and greenhouse gas emission depend on quantity and frequency of nitrogen fertilization in paddy soil [Data set]
Heliyon 10.5281/zenodo.10679656
Arsenic immobilization and greenhouse gas emission depend on quantity and frequency of nitrogen fertilization in paddy soil
Heliyon 10 (16), e35706 10.1016/j.heliyon.2024.e35706
Editorial overview: Analytical Biotechnology: It's all about getting smaller
Curr. Opin. Biotechnol. 85 , art. 103029 10.1016/j.copbio.2023.103029
Microbial electrosynthesis: opportunities for microbial pure cultures
Trends Biotechnol. 42 (8), 1035 - 1047 10.1016/j.tibtech.2024.02.004
Editorial letter of VSI: European scent of ISMET
Bioelectrochemistry 160 , art. 108772 10.1016/j.bioelechem.2024.108772
DC electric fields promote biodegradation of waterborne naphthalene in biofilter systems
Environ. Sci. Technol. 58 (41), 18234 - 18243 10.1021/acs.est.4c02924
In vitro anticancer studies of a small library of cyclic lipopeptides against the human cervix adenocarcinoma HeLa cells
J. Serb. Chem. Soc. 89 (4), 471 - 484 10.2298/JSC240109018H
Optimization of the ex situ biomethanation of hydrogen and carbon dioxide in a novel meandering plug flow reactor: Start-up phase and flexible operation
Bioengineering 11 (2), art. 165 10.3390/bioengineering11020165
Glycolate as alternative carbon source for Escherichia coli
J. Biotechnol. 381 , 76 - 85 10.1016/j.jbiotec.2024.01.001
Continuous-flow stable sulfur isotope analysis of organic and inorganic compounds by EA-MC-ICPMS
Anal. Chem. 96 (21), 8510 - 8517 10.1021/acs.analchem.4c00439
Assessing the ecological risks and spatial distribution of heavy metal contamination at solid waste dumpsites
Eurasian Soil Sci. 57 (7), 1277 - 1296 10.1134/S1064229324700303
Assessing the electrochemical CO2 reduction reaction performance requires more than reporting coulombic efficiency
Adv. Energy Sustain. Res. 5 (6), art. 2400031 10.1002/aesr.202400031
Synthesis of recovery patterns in microbial communities across environments
Microbiome 12 , art. 79 10.1186/s40168-024-01802-3
Delivery of small hydrophilic molecules across the stratum corneum: Identification of model systems and parameters to study topical delivery of free amino acids
Int. J. Pharm. 661 , art. 124372 10.1016/j.ijpharm.2024.124372
Assessing energy fluxes and carbon use in soil as controlled by microbial activity - A thermodynamic perspective A perspective paper
Soil Biol. Biochem. 193 , art. 109403 10.1016/j.soilbio.2024.109403
Gibbs energy or enthalpy - What is relevant for microbial C-turnover in soils? A letter to Wang & Kuzyakov, GBC, 2023
Glob. Change Biol. 30 (2), e17183 10.1111/gcb.17183
Rapid consumption of dihydrogen injected into a shallow aquifer by ecophysiologically different microbes
Environ. Sci. Technol. 58 (1), 333 - 341 10.1021/acs.est.3c04340
Characterization of anaerobic biotransformation of hexachlorocyclohexanes by novel microbial consortia enriched from channel and river sediments
J. Hazard. Mater. 476 , art. 135198 10.1016/j.jhazmat.2024.135198
Assessing the effects of microwave heat disturbance on soil microbial communities in Australian agricultural environments: A microcosm study
Appl. Soil Ecol. 198 , art. 105386 10.1016/j.apsoil.2024.105386
Microbial mediated carbon and nitrogen cycling in the spatially heterogenous vadose zone: A modeling study
Vadose Zone J. 23 (2), e20315 10.1002/vzj2.20315
Preliminary planning and optimization approach for wastewater infrastructure for regions with low data availability
Water 16 (5), art. 694 10.3390/w16050694
Isolation and characterization of bacteriophages specific to Streptococcus equi subspecies zooepidemicus and evaluation of efficacy ex vivo
Front. Microbiol. 15 , art. 1448958 10.3389/fmicb.2024.1448958
Comment on “Adsorption of uranium (VI) complexes with polymer-based spherical activated carbon”, published by Y.-A. Boussouga et al. [Water Research 249 (2024) 120825]
Water Res. 261 , art. 122031 10.1016/j.watres.2024.122031
Burning questions: Exploring the limits of microbial electrochemical technology for industrial biotechnological applications
Microb. Biotechnol. 17 (1), e14370 10.1111/1751-7915.14370
Field and laboratory evidence for manganese redox cycling controlling iron and arsenic retention in household sand filters
ACS ES&T Water 4 (1), 33 - 43 10.1021/acsestwater.3c00245
In 50 shades of orange: Germany's photovoltaic power generation landscape
Energies 17 (16), art. 3871 10.3390/en17163871
Hydrogen isotope labeling unravels origin of soil-bound organic contaminant residues in biodegradability testing
Nat. Commun. 15 , art. 9178 10.1038/s41467-024-53478-w
Hydrogen isotope labeling unravels origin of soil-bound organic contaminant residues in biodegradability testing [Dataset]
figshare 10.6084/m9.figshare.25954396.v1
Revealing cellular (poly)sulphide storage in electrochemically active sulphide oxidising bacteria using rotating disc electrodes
Bioelectrochemistry 158 , art. 108710 10.1016/j.bioelechem.2024.108710
Dataset accompanying "Revealing cellular (poly)sulphide storage in electrochemically active sulphide oxidising bacteria using rotating disc electrodes"
4TU.ResearchData 10.4121/a2279322-c37c-418e-8776-694f10f31d84.v1
Unraveling the effects of acrylonitrile butadiene styrene (ABS) microplastic ageing on the sorption and toxicity of ionic liquids with 2,4-D and glyphosate herbicides
Chemosphere 364 , art. 143271 10.1016/j.chemosphere.2024.143271
Direct phototransformation of sulfamethoxazole characterized by four-dimensional element compound specific isotope analysis
Environ. Sci. Technol. 58 (23), 10322 - 10333 10.1021/acs.est.4c02666
Tracking the transformation of persistent organic pollutants in food webs using multi element isotope and enantiomer fractionation
J. Hazard. Mater. 469 , art. 134046 10.1016/j.jhazmat.2024.134046
Novel stable isotope concepts to track antibiotics in wetland systems
J. Environ. Sci. 146 , 298 - 303 10.1016/j.jes.2024.02.005
A novel sulfatase for acesulfame degradation in wastewater treatment plants as evidenced from Shinella strains
Environ. Sci. Technol. 58 (42), 18892 - 18902 10.1021/acs.est.4c02283
Anaerobic dihydrogen consumption of nutrient-limited aquifer sediment microbial communities examined by stable isotope analysis
Isot. Environ. Health Stud. 60 (2), 103 - 121 10.1080/10256016.2024.2306146
Energy stored in soil organic matter is influenced by litter quality and the degree of transformation – A combustion calorimetry study
Geoderma 443 , art. 116846 10.1016/j.geoderma.2024.116846
Space aquatic chemistry: A roadmap for drinking water treatment in microgravity
Environ. Sci. Ecotechnol. 19 , art. 100344 10.1016/j.ese.2023.100344
Advancements in energy storage: Combining hollow iron cobalt selenide spheres with nickel cobalt layered double hydroxide nanosheets
J. Energy Storage 85 , art. 111079 10.1016/j.est.2024.111079
Source differentiation of BTEX compounds in groundwater contaminated due to refinery activities
J. Environ. Manage. 366 , art. 121893 10.1016/j.jenvman.2024.121893
Nieto GC-FID [Data set]
Zenodo 10.5281/zenodo.12220242
DNA stable isotope probing reveals the impact of trophic interactions on bioaugmentation of soils with different pollution histories
Microbiome 12 , art. 146 10.1186/s40168-024-01865-2
Changes in arsenic mobility and speciation across a 2000-year-old paddy soil chronosequence
Sci. Total Environ. 908 , art. 168351 10.1016/j.scitotenv.2023.168351
MuDoGeR: Multi-Domain Genome recovery from metagenomes made easy
Mol. Ecol. Resour. 24 (2), e13904 10.1111/1755-0998.13904
Tuberculosis and HIV/AIDS coinfection in patients attending Directly Observed Treatment Short-course (DOTS) centers in Anambra State, Nigeria: A retrospective study
Health Sci Rep. 7 (6), e2201 10.1002/hsr2.2201
Migrating ripples create streambed heterogeneity altering microbial diversity and metabolic activity
Limnol. Oceanogr. 69 (8), 1882 - 1899 10.1002/lno.12631
Natural attenuation of sulfonamides and metabolites in contaminated groundwater – Review, advantages and challenges of current documentation techniques
Water Res. 254 , art. 121416 10.1016/j.watres.2024.121416
Three-domain microbial communities in the gut of Pachnoda marginata larvae: A comparative study revealing opposing trends in gut compartments
Environ. Microbiol. Rep. 16 (4), e13324 10.1111/1758-2229.13324
Critical evaluation of the performance of rhamnolipids as surfactants for (phyto)extraction of Cd, Cu, Fe, Pb and Zn from copper smelter-affected soil
Sci. Total Environ. 912 , art. 168382 10.1016/j.scitotenv.2023.168382
Disentangling effects of multiple agricultural stressors on benthic and hyporheic nitrate uptake
Biogeochemistry 167 (3), 287 - 299 10.1007/s10533-024-01130-6
Anaerobic glucose uptake in Pseudomonas putida KT2440 in a bioelectrochemical system
Microb. Biotechnol. 17 (1), e14375 10.1111/1751-7915.14375
Beneficial applications of biofilms
Nat. Rev. Microbiol. 22 (5), 276 - 290 10.1038/s41579-023-00985-0
Vitamin B12 as a source of variability in isotope effects for chloroform biotransformation by Dehalobacter
MicrobiologyOpen 13 (4), e1433 10.1002/mbo3.1433
A deep insight into perfluorooctanoic acid photodegradation using metal ion-exchanged zeolites
ACS ES&T Eng. 4 (3), 748 - 757 10.1021/acsestengg.3c00462
Small decentralized technologies for high-strength wastewater treatment and reuse in arid and semi-arid regions
Environments 11 (7), art. 142 10.3390/environments11070142
Monitoring of hepatitis E virus in wastewater can identify clinically relevant variants
Liver Int. 44 (3), 637 - 643 10.1111/liv.15842
Electron leaks in biophotovoltaics: A multi-disciplinary perspective
ChemCatChem 16 (18), e202400639 10.1002/cctc.202400639
Oxygen in the mix: Is oxic microbial electrosynthesis a potential alternative for biomass production?
ChemElectroChem 11 (20), e202400397 10.1002/celc.202400397
Two-stage conversion of syngas and pyrolysis aqueous condensate into L-malate
Biotechnol. Biofuels Bioprod. 17 , art. 85 10.1186/s13068-024-02532-2
Potential deterioration of chemical water quality due to trace metal adsorption onto tire and road wear particles -Environmentally representative experiments
Environ. Pollut. 359 , art. 124571 10.1016/j.envpol.2024.124571
Sustainability, circular economy and bioeconomy: A conceptual review and integration into the notion of sustainable circular bioeconomy
New Medit 23 (2), 3 - 22 10.30682/nm2402a
Electrolysis of medium chain carboxylic acids to aviation fuel at technical scale
Fuel 356 , art. 129590 10.1016/j.fuel.2023.129590
A FAIR comparison of activated carbon, biochar, cyclodextrins, polymers, resins, and metal organic frameworks for the adsorption of per- and polyfluorinated substances
Chem. Eng. J. 498 , art. 155456 10.1016/j.cej.2024.155456
Oxidation of organic pollutants over MnO2 in cold water assisted by peroxydisulfate
Chem. Eng. J. 479 , art. 147170 10.1016/j.cej.2023.147170
Delineating organizational principles of the endogenous L-A virus by cryo-EM and computational analysis of native cell extracts
Commun. Biol. 7 , art. 557 10.1038/s42003-024-06204-7
Effects of temperature and DC electric fields on perfluorooctanoic acid sorption kinetics to activated carbon
Environ. Sci. Technol. 58 (13), 5987 - 5995 10.1021/acs.est.3c10590
Mechanisms of heating-electrokinetic co-driven perfluorooctanoic acid (PFOA) adsorption on zeolite
J. Environ. Sci. 146 , 264 - 271 10.1016/j.jes.2023.10.024
Trends and social aspects in the management and conversion of agricultural residues into valuable resources: A comprehensive approach to counter environmental degradation, food security, and climate change
Bioresour. Technol. 394 , art. 130258 10.1016/j.biortech.2023.130258
Place-based knowledge transfer in a local-to-global and knowledge-to-action context: key steps and
facilitative factors
Ecol. Soc. 29 (3), art. 8 10.5751/ES-15024-290308
MecE, MecB, and MecC proteins orchestrate methyl group transfer during dichloromethane fermentation
Appl. Environ. Microb. 90 (10), e00978-24 10.1128/aem.00978-24
Microbiological toxicity tests using standardized ISO/OECD methods-current state and outlook
Appl. Microbiol. Biotechnol. 108 , art. 454 10.1007/s00253-024-13286-0
Identification of the bacterial community that degrades phenanthrene sorbed to polystyrene nanoplastics using DNA-based stable isotope probing
Sci. Rep. 14 , art. 5229 10.1038/s41598-024-55825-9
Microbial electrodes
Nat. Rev. Method. Prim. 4 , art. 60 10.1038/s43586-024-00332-4
Enlighting electron routes in oxyfunctionalizing Synechocystis sp. PCC 6803
ChemBioChem 25 (6), e202300475 10.1002/cbic.202300475
Medium-chain carboxylates production from plant waste: kinetic study and effect of an enriched microbiome
Biotechnol. Biofuels Bioprod. 17 , art. 79 10.1186/s13068-024-02528-y
Enriching electroactive microorganisms from ferruginous lake waters – Mind the sulfate reducers!
Bioelectrochemistry 157 , art. 108661 10.1016/j.bioelechem.2024.108661
Dual C and Cl compound-specific isotope analysis and metagenomic insights into the degradation of the pesticide methoxychlor
J. Hazard. Mater. 480 , art. 135929 10.1016/j.jhazmat.2024.135929
Novel extraction methods and compound-specific isotope analysis of methoxychlor in environmental water and aquifer slurry samples
Sci. Total Environ. 931 , art. 172858 10.1016/j.scitotenv.2024.172858
Biological recovery of phosphorus (BioP-Rec) from wastewater streams using brewer’s yeast on pilot-scale
Eng. Life Sci. 24 (2), e2300208 10.1002/elsc.202300208
Editorial: thematic issue on microbial ecotoxicology
FEMS Microbiol. Ecol. 100 (8), fiae097 10.1093/femsec/fiae097
Carbon and energy balance of biotechnological glycolate production from microalgae in a pre-industrial scale flat panel photobioreactor
Biotechnol. Biofuels Bioprod. 17 , art. 42 10.1186/s13068-024-02479-4
Electrogenic sulfur oxidation mediated by cable bacteria and its ecological effects
Environ. Sci. Ecotechnol. 20 , art. 100371 10.1016/j.ese.2023.100371
Comparative in vitro toxicological effects of water-soluble and insoluble components of atmospheric PM2.5 on human lung cells
Toxicol. Vitro 98 , art. 105828 10.1016/j.tiv.2024.105828
Systems biology of electrogenic Pseudomonas putida - multi-omics insights and metabolic engineering for enhanced 2-ketogluconate production
Microb. Cell. Fact. 23 , art. 246 10.1186/s12934-024-02509-8
The impact of liquids and saturated salt solutions on polymer-coated fiber optic sensors for distributed strain and temperature measurement
Sensors 24 (14), art. 4659 10.3390/s24144659
Modular chip-based nanoSFC–MS for ultrafast separations
Anal. Chem. 96 (34), 13888 - 13896 10.1021/acs.analchem.4c01958
Changes of composition and antibiotic resistance of fecal coliform bacteria in municipal wastewater treatment plant
J. Environ. Sci. 146 , 241 - 250 10.1016/j.jes.2023.09.012
Removal of antibiotic resistance genes during swine manure composting is strongly impaired by high levels of doxycycline residues
Waste Manage. 177 , 76 - 85 10.1016/j.wasman.2024.01.037
Community coalescence and plant host filtering determine the spread of tetracycline resistance genes from pig manure into the microbiome continuum of the soil–plant system
Microbiol. Res. 284 , art. 127734 10.1016/j.micres.2024.127734
Priority establishment of soil bacteria in rhizosphere limited the spread of tetracycline resistance genes from pig manure to soil-plant systems based on synthetic communities approach
Environ. Int. 187 , art. 108732 10.1016/j.envint.2024.108732
In situ grown single-atom cobalt on carbon nanofibers for efficient adsorptive removal of antibiotics: Performance and mechanisms understanding
Chem. Eng. J. 499 , art. 156594 10.1016/j.cej.2024.156594
Stable isotopes and nanoSIMS single-cell imaging reveals soil plastisphere colonizers able to assimilate sulfamethoxazole
Environ. Pollut. 355 , art. 124197 10.1016/j.envpol.2024.124197
Enhancing insights: exploring the information content of calorespirometric ratio in dynamic soil microbial growth processes through calorimetry
Front. Microbiol. 15 , art. 1321059 10.3389/fmicb.2024.1321059
Residual cells and nutrient availability guide wound healing in bacterial biofilms
Soft Matter 20 (5), 1047 - 1060 10.1039/D3SM01032E
Should transformation products change the way we manage chemicals?
Environ. Sci. Technol. 58 (18), 7710 - 7718 10.1021/acs.est.4c00125
Co4(PW9O34)2 polyoxmetalate cluster intercalated in layered double hydroxides as catalyst for the oxidation of p-arsanilic acid and subsequent immobilization of arsenic-containing byproducts
ACS Appl. Nano Mater. 7 (19), 23008 - 23017 10.1021/acsanm.4c04245
MnFe layered double hydroxides confined MnOx for peroxymonosulfate activation: A novel manner for the selective production of singlet oxygen
Environ. Pollut. 348 , art. 123865 10.1016/j.envpol.2024.123865
Viral communities contribute more to the lysis of antibiotic-resistant bacteria than the transduction of antibiotic resistance genes in anaerobic digestion revealed by metagenomics
Environ. Sci. Technol. 58 (5), 2346 - 2359 10.1021/acs.est.3c07664
Anaerobic biotransformation of hexachlorocyclohexane isomers in aqueous condition: dual C-Cl isotope fractionation and impact on microbial community compositions
Water Res. 254 , art. 121389 10.1016/j.watres.2024.121389
Interspecies mobility of organohalide respiration gene clusters enables genetic bioaugmentation
Environ. Sci. Technol. 58 (9), 4214 - 4225 10.1021/acs.est.3c09171
Multi-element (2H, 13C, 37Cl) isotope analysis to characterize reductive transformation of α-, β-, γ-, and δ-HCH isomers by cobalamin and Fe0 nanoparticles
J. Hazard. Mater. 480 , art. 135932 10.1016/j.jhazmat.2024.135932
Time-dependent regulation of soil aggregates on fertilizer N retention and the influence of straw mulching
Soil Biol. Biochem. 198 , art. 109551 10.1016/j.soilbio.2024.109551
Evaluation and prediction of anthropogenic impacts on long-term multimedia fate and health risks of PFOS and PFOA in the Elbe River Basin
Water Res. 257 , art. 121675 10.1016/j.watres.2024.1216752023 (153)
Combining flow cytometry and metagenomics improves recovery of metagenome-assembled genomes in a cell culture from activated sludge
Microorganisms 11 (1), art. 175 10.3390/microorganisms11010175
Hypertonic stress induced changes of Pseudomonas fluorescens adhesion towards soil minerals studied by AFM
Sci. Rep. 13 , art. 17146 10.1038/s41598-023-44256-7
Soybean (Glycine max) cropland suitability analysis in subtropical desert climate through GIS-based multicriteria analysis and Sentinel-2 multispectral imaging
Land 12 (11), art. 2034 10.3390/land12112034
Microbe-assisted rhizoremediation of hydrocarbons and growth promotion of chickpea plants in petroleum hydrocarbons-contaminated soil
Sustainability 15 (7), art. 6081 10.3390/su15076081
Marine fungi select and transport aerobic and anaerobic bacterial populations from polycyclic aromatic hydrocarbon-contaminated sediments
mBio 14 (2), e02761-22 10.1128/mbio.02761-22
rcolpo/pgp_reconstruction: First public release
Version: v0.0.4-beta Zenodo 10.5281/zenodo.8205880
Yeast gene KTI13 (alias DPH8) operates in the initiation step of diphthamide synthesis on elongation factor 2
Microb. Cell 10 (9), 195 - 203 10.15698/mic2023.09.804
Fate of glyphosate and its degradation products AMPA, glycine and sarcosine in an agricultural soil: Implications for environmental risk assessment
J. Hazard. Mater. 447 , art. 130847 10.1016/j.jhazmat.2023.130847
Is sorption technology fit for the removal of persistent and mobile organic contaminants from water?
Sci. Total Environ. 880 , art. 163343 10.1016/j.scitotenv.2023.163343
The AnimalAssociatedMetagenomeDB reveals a bias towards livestock and developed countries and blind spots in functional-potential studies of animal-associated microbiomes
Animal Microbiome 5 , art. 48 10.1186/s42523-023-00267-3
Bottom-up synthesis of de-functionalized and dispersible carbon spheres as colloidal adsorbent
Int. J. Mol. Sci. 24 (4), art. 3831 10.3390/ijms24043831
Mixotrophic chain elongation with syngas and lactate as electron donors
Microb. Biotechnol. 16 (2), 322 - 336 10.1111/1751-7915.14163
Formate-induced CO tolerance and methanogenesis inhibition in fermentation of syngas and plant biomass for carboxylate production
Biotechnol. Biofuels Bioprod. 16 , art. 26 10.1186/s13068-023-02271-w
Characterization of phage vB_EcoS-EE09 infecting E. coli DSM613 isolated from wastewater treatment plant effluent and comparativepProteomics of the infected and non-infected host
Microorganisms 11 (11), art. 2688 10.3390/microorganisms11112688
Environmental and anthropogenic factors shape the skin bacterial communities of a semi-arid amphibian species
Microb. Ecol. 86 (2), 1393 - 1404 10.1007/s00248-022-02130-5
Metagenomic analysis of anaerobic microbial communities degrading short-chain fatty acids as sole carbon sources
Microorganisms 11 (2), art. 420 10.3390/microorganisms11020420
Adaptation of the metolachlor-degrading fungus Trichoderma harzianum to the simultaneous presence of low-density polyethylene (LDPE) microplastics
Ecotox. Environ. Safe. 267 , art. 115656 10.1016/j.ecoenv.2023.115656
Recently evolved combination of unique sulfatase and amidase genes enables bacterial degradation of the wastewater micropollutant acesulfame worldwide
Front. Microbiol. 14 , art. 1223838 10.3389/fmicb.2023.1223838
Data associated with publication "The media composition as a crucial element in high-throughput metabolic network reconstruction"
Zenodo 10.5281/zenodo.7515886
The media composition as a crucial element in high-throughput metabolic network reconstruction
Interface Focus 13 (2), art. 20220070 10.1098/rsfs.2022.0070
Microbial electrosynthesis with Clostridium ljungdahlii benefits from hydrogen electron mediation and permits a greater variety of products
Green Chem. 25 (11), 4375 - 4386 10.1039/D3GC00471F
Spatial organization and proteome of a dual-species cyanobacterial biofilm alter among N2-fixing and non-fixing conditions
mSystems 8 (3), art. 00302-23 10.1128/msystems.00302-23
Quantifying energy expenditure in Göttingen Minipigs with the 13C-bicarbonate method under basal and drug-treated conditions
Clin. Nutr. ESPEN 58 , 388 - 396 10.1016/j.clnesp.2023.10.041
A long-term passive sampling approach for wastewater-based monitoring of SARS-CoV-2 in Leipzig, Germany
Sci. Total Environ. 887 , art. 164143 10.1016/j.scitotenv.2023.164143
Meeting report: The first soil viral workshop 2022
Virus Res. 331 , art. 199121 10.1016/j.virusres.2023.199121
Assessment of new and genome-reduced Pseudomonas strains regarding their robustness as chassis in biotechnological applications
Microorganisms 11 (4), art. 837 10.3390/microorganisms11040837
Environmental persistence assessment of heterocyclic polyaromatic hydrocarbons – Ultimate and primary biodegradability using adapted and non-adapted microbial communities
J. Hazard. Mater. 460 , art. 132370 10.1016/j.jhazmat.2023.132370
StandEnA: a customizable workflow for standardized annotation and generating a presence–absence matrix of proteins
Bioinform. Adv. 3 (1), vbad069 10.1093/bioadv/vbad069
Integrated electrosynthesis and biosynthesis for the production of adipic acid from lignin-derived phenols
Green Chem. 25 (12), 4662 - 4666 10.1039/D3GC01105D
Electrochemical cellobiose valorization: Anodic oxidation to cellobionic acid and cathodic reduction to cellobitol
ChemistrySelect 8 (27), e202301823 10.1002/slct.202301823
Does pre-enrichment of anodes with acetate to select for Geobacter spp. enhance performance of microbial fuel cells when switched to more complex substrates?
Front. Microbiol. 14 , art. 1199286 10.3389/fmicb.2023.1199286
Live tracking metabolic networks and physiological responses within microbial assemblages at single-cell level
PNAS Nexus 2 (3), pgad006 10.1093/pnasnexus/pgad006
Improving the performance of bioelectrochemical sulfate removal by applying flow mode
Microb. Biotechnol. 16 (3), 595 - 604 10.1111/1751-7915.14157
Tracking deuterium uptake in hydroponically grown maize roots using correlative helium ion microscopy and Raman micro-spectroscopy
Plant Methods 19 , art. 71 10.1186/s13007-023-01040-y
Draft genome sequence of the plant growth promoter and biocontrol agent Bacillus velezensis strain BIB0110
Microbiol. Resour. Ann. 12 (6), e00231-23 10.1128/mra.00231-23
A unified and simple medium for growing model methanogens
Front. Microbiol. 13 , art. 1046260 10.3389/fmicb.2022.1046260
Combining Geobacter spp. dominated biofilms and anaerobic digestion effluents─The effect of effluent composition and electrode potential on biofilm activity and stability
Environ. Sci. Technol. 57 (6), 2584 - 2594 10.1021/acs.est.2c07574
The heterogeneity–diversity–system performance nexus
Natl. Sci. Rev. 10 (7), nwad109 10.1093/nsr/nwad109
Modernizing persistence–bioaccumulation–toxicity (PBT) assessment with high throughput animal-free methods
Arch. Toxicol. 97 (5), 1267 - 1283 10.1007/s00204-023-03485-5
"OCTOPUS" principle reduces wastewater management costs through network optimization and clustering
One Earth 6 (9), 1227 - 1234 10.1016/j.oneear.2023.08.005
Rapid prototyping of microfluidic chips enabling controlled biotechnology applications in microspace
Curr. Opin. Biotechnol. 81 , art. 102948 10.1016/j.copbio.2023.102948
Cryo-printed microfluidics enable rapid prototyping for optical-cell analysis
Microfluid. Nanofluid. 27 , art. 5 10.1007/s10404-022-02613-4
Fe-zeolites for the adsorption and oxidative degradation of nitroaromatic compounds in water
J. Hazard. Mater. 459 , art. 132125 10.1016/j.jhazmat.2023.132125
Fe-zeolite as on-site regenerable adsorber for chlorohydrocarbons in groundwater – from laboratory to pilot test
Chem. Ing. Tech. 95 (12), 1999 - 2007 10.1002/cite.202300096
Distinct life history strategies underpin clear patterns of succession in microparasite communities infecting a wild mammalian host
Mol. Ecol. 32 (13), 3733 - 3746 10.1111/mec.16949
Effect of alkaline and mechanical pretreatment of wheat straw on methanogenic enrichment cultures from Pachnoda marginata larva gut
Fermentation 9 (1), art. 60 10.3390/fermentation9010060
Superior anodic electro-fermentation by enhancing capacity for extracellular electron transfer
Bioresour. Technol. 389 , art. 129813 10.1016/j.biortech.2023.129813
Labor division of electroactive and carbon degrading microorganisms in bioelectrochemical laminar flow reactors
J. Environ. Chem. Eng. 11 (5), art. 111074 10.1016/j.jece.2023.111074
Diurnal variation in the atmospheric electric field with respect to aerosol and meteorological parameters at Islamabad, Pakistan
J. Earth Syst. Sci. 132 (3), art. 134 10.1007/s12040-023-02151-9
Antibiotic resistance indicator genes in biofilm and planktonic microbial communities after wastewater discharge
Front. Microbiol. 14 , art. 1252870 10.3389/fmicb.2023.1252870
The fate of sulfonamide resistance genes and anthropogenic pollution marker intI1 after discharge of wastewater into a pristine river stream
Front. Microbiol. 14 , art. 1058350 10.3389/fmicb.2023.1058350
Application potential of wastewater fertigated Short Rotation Coppice systems in a selected region (Aligarh, UP, India)
Recycling 8 (5), art. 75 10.3390/recycling8050075
Triple‐element stable isotope analysis of chloromethane emitted by royal fern and degraded by club moss
J. Geophys. Res.-Biogeosci. 128 (5), e2022JG007256 10.1029/2022JG007256
Assessment of meteorological and air quality drivers of elevated ambient ozone in Beijing via machine learning approach
Environ. Sci. Pollut. Res. 30 (47), 104086 - 104099 10.1007/s11356-023-29665-5
A review of particulate pollution over Himalaya region: Characteristics and salient factors contributing ambient PM pollution
Atmos. Environ. 294 , art. 119472 10.1016/j.atmosenv.2022.119472
Dehalococcoides mccartyi strain CBDB1 takes up protons from the cytoplasm to reductively dehalogenate organohalides indicating a new modus of proton motive force generation
Front. Microbiol. 14 , art. 1305108 10.3389/fmicb.2023.1305108
An efficient and scalable method for the production of immunogenic SARS-CoV-2 virus-like particles (VLP) from a mammalian suspension cell line
Vaccines 11 (9), art. 1469 10.3390/vaccines11091469
Design and construction of a new reactor for flexible biomethanation of hydrogen
Fermentation 9 (8), art. 774 10.3390/fermentation9080774
Roadmap for focused ion beam technologies
Appl. Phys. Rev. 10 (4), art. 041311 10.1063/5.0162597
Regenerierung von Trockenmitteln für Wasserstoff durch dielektrische Erwärmung mit Radiowellen. Regeneration of desiccants for hydrogen by dielectric heating with radio waves
Chem. Ing. Tech. 95 (11), 1834 - 1843 10.1002/cite.202300040
Changes of the bacterial composition in duodenal fluid from patients with liver cirrhosis and molecular bacterascites
Sci. Rep. 13 , art. 23001 10.1038/s41598-023-49505-3
On the stability of electrochemical CO2 reduction reaction to formate at indium electrodes at biocompatible conditions
Electrochim. Acta 462 , art. 142733 10.1016/j.electacta.2023.142733
Beyond pathogenesis: Detecting the full spectrum of ecological interactions in the virosphere
PLoS Biol. 21 (5), e3002109 10.1371/journal.pbio.3002109
Liquid chromatorgraphy Fourier transform ion cyclotron resonance mass spectrometry (LC-FT-ICR MS) data of dissolved organic matter (DOM) from soil solution samples of climate and cadmium manipulated soils
Data Investigation Portal UFZ 10.48758/ufz.14199
Identification of huge phages from wastewater metagenomes
Viruses 15 (12), art. 2330 10.3390/v15122330
Continuous operation of fungal wheel reactor based on solid-state fermentation for the removal of pharmaceutical and personal care products
J. Environ. Manage. 331 , art. 117316 10.1016/j.jenvman.2023.117316
High salt electrolyte solutions challenge the electrochemical CO2 reduction reaction to formate at indium and tin cathodes
ChemElectroChem 10 (23), e202300311 10.1002/celc.202300311
Cover profile: High salt electrolyte solutions challenge the electrochemical CO2 reduction reaction to formate at indium and tin cathodes
ChemElectroChem 10 (23), e202300655 10.1002/celc.202300655
Front cover: High salt electrolyte solutions challenge the electrochemical CO2 reduction reaction to formate at indium and tin cathodes (ChemElectroChem 23/2023)
ChemElectroChem 10 (23), e202300656 10.1002/celc.202300656
Evaluating scaling of capillary photo‐biofilm reactors for high cell density cultivation of mixed trophies artificial microbial consortia
Eng. Life Sci. 23 (9), e2300014 10.1002/elsc.202300014
Degradation of emerging pollutants on bifunctional ZnFeV LDH@graphite felt cathode through prominent catalytic activity in heterogeneous electrocatalytic processes
J. Environ. Manage. 342 , art. 118090 10.1016/j.jenvman.2023.118090
Enhanced generation of reactive radicals and electrocatalytic oxidation of levofloxacin using a trimetallic CuFeV layered double hydroxide-containing electrode
Chemosphere 340 , art. 139817 10.1016/j.chemosphere.2023.139817
Mycelial nutrient transfer promotes bacterial co-metabolic organochlorine pesticide degradation in nutrient-deprived environments
ISME J. 17 (4), 570 - 578 10.1038/s41396-023-01371-7
Proteomics data of Escherichia phage vB_EcoS-EE09 isolated from wastewater treatment plant effluent and its infected and non-infected host E. coli DSM613. Project PXD046455 [Data set]
PRoteomics IDEntifications Database (PRIDE) 10.6019/PXD046455
GroEL-proteotyping of bacterial communities using tandem mass spectrometry
Int. J. Mol. Sci. 24 (21), art. 15692 10.3390/ijms242115692
GR2L: A robust dual-layer green roof water balance model to assess multifunctionality aspects under climate variability
Front. Clim. 5 , art. 1115595 10.3389/fclim.2023.1115595
Identification of antibiotic resistance gene hosts in treatment wetlands using a single-cell based high-throughput approach
Water 15 (13), art. 2432 10.3390/w15132432
Green extractants in assisting recovery of REEs: A case study
Molecules 28 (3), art. 965 10.3390/molecules28030965
Comparing theoretical and practical biomass yields calls for revisiting thermodynamic growth models for electroactive microorganisms
Water Res. 242 , art. 120279 10.1016/j.watres.2023.120279
Exploiting synergies between microbial electrochemical technologies and synthetic biology
Microb. Biotechnol. 16 (3), 485 - 488 10.1111/1751-7915.14208
Improved recovery and annotation of genes in metagenomes through the prediction of fungal introns
Mol. Ecol. Resour. 23 (8), 1800 - 1811 10.1111/1755-0998.13852
Ecological forces dictate microbial community assembly processes in bioreactor systems
Curr. Opin. Biotechnol. 81 , art. 102917 10.1016/j.copbio.2023.102917
Understanding and predicting physical clogging at managed aquifer recharge systems: A field-based modeling approach
Adv. Water Resour. 177 , art. 104462 10.1016/j.advwatres.2023.104462
Application of physical clogging models to Managed Aquifer Recharge: a review of modelling approaches from engineering fields
Acque Sotter. 12 (3), 9 - 20 10.7343/as-2023-681
Sorption of ionic liquids in soil enriched with polystyrene microplastic reveals independent behavior of cations and anions
Chemosphere 341 , art. 139927 10.1016/j.chemosphere.2023.139927
Functional redundancy secures resilience of chain elongation communities upon pH shifts in closed bioreactor ecosystems
Environ. Sci. Technol. 57 (46), 18350 - 18361 10.1021/acs.est.2c09573
Uptake and transformation of hexachlorocyclohexane isomers (HCHs) in tree growth rings at a contaminated field site
Environ. Sci. Technol. 57 (23), 8776 - 8784 10.1021/acs.est.3c01929
Determination of stable hydrogen isotopic composition and isotope enrichment factor at low hydrogen concentration
Anal. Chem. 95 (44), 16272 - 16278 10.1021/acs.analchem.3c03214
scMAR-Seq: a novel workflow for targeted single-cell genomics of microorganisms using radioactive labeling
mSystems 8 (6), e00998-23 10.1128/msystems.00998-23
The microbiology of Power-to-X applications
FEMS Microbiol. Rev. 47 (2), fuad013 10.1093/femsre/fuad013
Development of an automated online flow cytometry method to quantify cell density and fingerprint bacterial communities
Cells 12 (12), art. 1559 10.3390/cells12121559
Women in microbial physiology and metabolism: 2022. Editorial
Front. Microbiol. 14 , art. 1268568 10.3389/fmicb.2023.1268568
Interlaboratory reproducibility in growth and reporter expression in the cyanobacterium Synechocystis sp. PCC 6803
ACS Synth. Biol. 12 (6), 1823 - 1835 10.1021/acssynbio.3c00150
Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa
Front. Microbiol. 14 , art. 1037845 10.3389/fmicb.2023.1037845
Recent developments in microplastic contaminated water treatment: Progress and prospects of carbon-based two-dimensional materials for membranes separation
Chemosphere 316 , art. 137704 10.1016/j.chemosphere.2022.137704
Neglected atmospheric microplastic pollution in South Asia reflects a wider failure
Ecol. Inform. 73 , art. 101949 10.1016/j.ecoinf.2022.101949
Chemical composition of monsoon bulk precipitation in the Salalah area, Oman
Chem. Geol. 635 , art. 121621 10.1016/j.chemgeo.2023.121621
Humic substance photosensitized degradation of phthalate characterized by 2H and 13C isotope fractionation
Environ. Sci. Technol. 57 (5), 1930 - 1939 10.1021/acs.est.2c06783
Carbon isotope fractionation of di-(2-ethylhexyl)-phthalate during photosensitized degradation by •OH and SO4·- for characterization of reaction mechanisms
Chem. Eng. J. 475 , art. 145950 10.1016/j.cej.2023.145950
Carbon and hydrogen isotope fractionation of phthalates during photocatalysis reactions in aqueous solution containing Fe(III) complexes or iron minerals
Water Res. 247 , art. 120740 10.1016/j.watres.2023.120740
Responses of canopy hydrometorological parameters to oak dieback in the Mediterranean sparse forest, Iran
Agric. For. Meteorol. 343 , art. 109784 10.1016/j.agrformet.2023.109784
Membrane-processed honey samples for pollen characterization with health benefits
Chemosphere 319 , art. 137994 10.1016/j.chemosphere.2023.137994
Improvement of treatment performance of the conventional wastewater treatment plant: A case study of the Central Wastewater Treatment Plant in Ulaanbaatar, Mongolia
Sustainability 15 (5), art. 4528 10.3390/su15054528
Towards a synthetic hydrogen sensor in cyanobacteria: Functional production of an oxygen-tolerant regulatory hydrogenase in Synechocystis sp. PCC 6803
Front. Microbiol. 14 , art. 1122078 10.3389/fmicb.2023.1122078
Carbon and hydrogen stable isotope fractionation of sulfamethoxazole during anaerobic transformation catalyzed by Desulfovibrio vulgaris Hildenborough
Chemosphere 311, Part 2 , art. 136923 10.1016/j.chemosphere.2022.136923
A coculture of photoautotrophs and hydrolytic heterotrophs enables efficient upcycling of starch from wastewater toward biomass-derived products: Synergistic interactions impacting metabolism of the consortium
Environ. Sci. Technol. 57 (41), 15523 - 15532 10.1021/acs.est.3c05321
Basic principles for biosurfactant-assisted (bio)remediation of soils contaminated by heavy metals and petroleum hydrocarbons – A critical evaluation of the performance of rhamnolipids
J. Hazard. Mater. 443, Part A , art. 130171 10.1016/j.jhazmat.2022.130171
Can ionic liquids exist in the soil environment? Effect of quaternary ammonium cations on glyphosate sorption, mobility and toxicity in the selected herbicidal ionic liquids
J. Mol. Liq. 370 , art. 120981 10.1016/j.molliq.2022.120981
A multi-functional nature-based solution (NBS) for greywater treatment and reuse at the same plot
Ecol. Eng. 191 , art. 106952 10.1016/j.ecoleng.2023.106952
Effect of hydraulic loading rate on treatment performance of a pilot wetland roof treating greywater from a household
Water 15 (9), art. 3375 10.3390/w15193375
Effects of zinc-enriched amino acids on rice plants (Oryza sativa L.) for adaptation in saline-sodic soil conditions: Growth, nutrient uptake and biofortification of zinc
S. Afr. J. Bot. 162 , 370 - 380 10.1016/j.sajb.2023.09.011
Continuous cultivation of Dehalococcoides mccartyi with brominated tyrosine avoids toxic byproducts and gives tight reactor control
Water Res. 229 , art. 119396 10.1016/j.watres.2022.119396
COVID-19 alters human microbiomes: a meta-analysis
Front. Cell. Infect. Microbiol. 13 , art. 1211348 10.3389/fcimb.2023.1211348
Universal drivers of cheese microbiomes
iScience 26 (1), art. 105744 10.1016/j.isci.2022.105744
Cost-effective selective hydrogen sensor based on the combination of catalytic spillover effect and impedance measurement
Int. J. Hydrog. Energy 48 (96), 37550 - 37562 10.1016/j.ijhydene.2022.12.302
Exploring the potential molecular mechanisms of interactions between a probiotic consortium and its coral host
mSystems 8 (1), e00921-22 10.1128/msystems.00921-22
Electrosorption of organic compounds: State of the art, challenges, performance, and perspectives
Chem. Eng. J. 471 , art. 144354 10.1016/j.cej.2023.144354
Recovery of 197 eukaryotic bins reveals major challenges for eukaryote genome reconstruction from terrestrial metagenomes
Mol. Ecol. Resour. 23 (5), 1066 - 1076 10.1111/1755-0998.13776
Microbial single-cell mass spectrometry: status, challenges, and prospects
Curr. Opin. Biotechnol. 83 , art. 102977 10.1016/j.copbio.2023.102977
Interference of electron transfer chain inhibitors in bioelectrochemical systems
Electrochem. Commun. 152 , art. 107527 10.1016/j.elecom.2023.107527
Sulfate reduction and homoacetogenesis at various hypersaline conditions: Implications for H2 underground gas storage
Front. Energy Res. 11 , art. 1125619 10.3389/fenrg.2023.1125619
Production of (hydroxy)benzoate-derived polyketides by engineered Pseudomonas with in situ extraction
Bioresour. Technol. 388 , art. 129741 10.1016/j.biortech.2023.129741
Bridging the gap in African biodiversity genomics and bioinformatics
Nat. Biotechnol. 41 (9), 1348 - 1354 10.1038/s41587-023-01933-2
Natural product biosynthetic potential reflects macroevolutionary diversification within a widely distributed bacterial taxon
mSystems 8 (6), e00643-23 10.1128/msystems.00643-23
Cost-effective method for estimation of tree crown density in urban settings using a smartphone
Blue-Green Syst. 5 (2), 121 - 134 10.2166/bgs.2023.029
Assessing the growth kinetics and stoichiometry of Escherichia coli at the single-cell level
Eng. Life Sci. 23 (1), e2100157 10.1002/elsc.202100157
Respiratory protein interactions in Dehalobacter sp. strain 8M revealed through genomic and native proteomic analyses
Environ. Microbiol. 25 (11), 2604 - 2620 10.1111/1462-2920.16464
Application of gas diffusion electrodes in bioeconomy: An update
Biotechnol. Bioeng. 120 (6), 1465 - 1477 10.1002/bit.28383
Holistic exploitation of pulsed electric field (PEF)-treated and lipid extracted microalgae Auxenochlorella protothecoides, utilizing anaerobic digestion (AD)
Algal Res. 69 , art. 102950 10.1016/j.algal.2022.102950
Toward the future of OECD/ISO biodegradability testing-new approaches and developments
Appl. Microbiol. Biotechnol. 107 (7-8), 2073 - 2095 10.1007/s00253-023-12406-6
Using a microbial fuel cell to balance the carbon‑nitrogen mismatch in submerged fixed-bed reactors for the resilient treatment of mariculture wastewater
J. Water Process Eng. 53 , art. 103629 10.1016/j.jwpe.2023.103629
Photosynthesis driven continuous hydrogen production by diazotrophic cyanobacteria in high cell density capillary photobiofilm reactors
Bioresour. Technol. 373 , art. 128703 10.1016/j.biortech.2023.128703
Cyanobacteria as whole-cell factories: current status and future prospectives
Curr. Opin. Biotechnol. 80 , art. 102892 10.1016/j.copbio.2023.102892
Light‐driven redox biocatalysis on gram‐scale in Synechocystis sp. PCC 6803 via an in vivo cascade
Plant Biotechnol. J. 21 (10), 2074 - 2083 10.1111/pbi.14113
Effect of biochar and compost addition on mitigating salinity stress and improving fruit quality of tomato
Agronomy-Basel 13 (9), art. 2197 10.3390/agronomy13092197
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”
Appl. Microbiol. Biotechnol. 107 (5-6), 1829 - 1843 10.1007/s00253-023-12375-w
Development of embodied capital: diet composition, foraging skills, and botanical knowledge of forager children in the Congo Basin
Front. Ecol. Evol. 11 , art. 935987 10.3389/fevo.2023.935987
Carbon and hydrogen stable isotope fractionation due to monooxygenation of short-chain alkanes by butane monooxygenase of Thauera butanivorans Bu-B1211
Front. Microbiol. 14 , art. 1250308 10.3389/fmicb.2023.1250308
Structure-function and engineering of plant UDP-glycosyltransferase
Comp. Struct. Biotechnol. J. 21 , 5358 - 5371 10.1016/j.csbj.2023.10.046
Proteogenomics of the novel Dehalobacterium formicoaceticum strain EZ94 highlights a key role of methyltransferases during anaerobic dichloromethane degradation
Environ. Sci. Pollut. Res. 30 (33), 80602 - 80612 10.1007/s11356-023-28144-1
Fate of horizontal-gene-transfer markers and beta-lactamase genes during thermophilic composting of human excreta
Microorganisms 11 (2), art. 308 10.3390/microorganisms11020308
Glyphosate versus glyphosate based ionic liquids: Effect of cation on glyphosate biodegradation, soxA and phnJ genes abundance and microbial populations changes during soil bioaugmentation
Chemosphere 316 , art. 137717 10.1016/j.chemosphere.2022.137717
2,4-D versus 2,4-D based ionic liquids: Effect of cation on herbicide biodegradation, tfdA genes abundance and microbiome changes during soil bioaugmentation
J. Hazard. Mater. 452 , art. 131209 10.1016/j.jhazmat.2023.131209
Temperature and soil moisture change microbial allocation of pesticide-derived carbon
Eur. J. Soil Sci. 74 (5), e13417 10.1111/ejss.13417
Multi-country metabolic signature discovery for chicken health classification
Metabolomics 19 (2), art. 9 10.1007/s11306-023-01973-4
New insights into the mechanism for 1O2-Dominated peroxymonosulfate activation in saline solution: In-situ generation of H2O2 to inhibit the AOX formation
Chem. Eng. J. 474 , art. 145698 10.1016/j.cej.2023.145698
Improve niche colonization and microbial interactions for organohalide-respiring-bacteria-mediated remediation of chloroethene-contaminated sites
Environ. Sci. Technol. 57 (45), 17338 - 17352 10.1021/acs.est.3c05932
Response of prokaryotic, eukaryotic and algal communities to heavy rainfall in a reservoir supplied with reclaimed water
J. Environ. Manage. 334 , art. 117394 10.1016/j.jenvman.2023.117394
Enhancing Insights: Exploring the Information Content of Calorespirometric Measurements in Dynamic Soil Processes (Version 1.0)
Data Investigation Portal UFZ 10.48758/UFZ.14030
Water safety consideration of the dual nature of virus in global urban water cycle: from source to reuse
ACS ES&T Water 3 (8), 1980 - 1983 10.1021/acsestwater.3c00222
Mechanistic insight into the Dehalococcoides-mediated reductive dechlorination of polychlorinated biphenyls
Phys. Chem. Chem. Phys. 25 (22), 15193 - 15199 10.1039/d3cp01055d
Insight into the mechanism underlying Dehalococcoides mccartyi strain CBDB1-mediated B12-dependent aromatic reductive dehalogenation
Environ. Sci. Technol. 57 (29), 10773 - 10781 10.1021/acs.est.3c00364
Turnover of bacterial biomass to soil organic matter via fungal biomass and its metabolic implications
Soil Biol. Biochem. 180 , art. 108995 10.1016/j.soilbio.2023.1089952022 (159)
The oxygen dilemma: The challenge of the anode reaction for microbial electrosynthesis from CO2
Front. Microbiol. 13 , art. 947550 10.3389/fmicb.2022.947550
Thiourea leaching of gold from processed municipal solid waste incineration residues
J. Mater. Cycles Waste Manag. 24 (6), 2243 - 2254 10.1007/s10163-022-01476-9
Efficient carbon and nitrogen transfer from marine diatom aggregates to colonizing bacterial groups
Sci. Rep. 12 , art. 14949 10.1038/s41598-022-18915-0
Changes in composition and diversity of epiphytic microorganisms on field pea seeds, partial crop peas, and whole crop peas during maturation and ensiling with or without lactic acid bacteria inoculant
Microbiol. Spectr. 10 (4), e00953-22 10.1128/spectrum.00953-22
Uniform and dispersible carbonaceous microspheres as quasi-liquid sorbent
Chemosphere 307, Part 4 , art. 136079 10.1016/j.chemosphere.2022.136079
Recirculation of H2, CO2, and ethylene improves carbon fixation and carboxylate yields in anaerobic fermentation
ACS Sustain. Chem. Eng. 10 (13), 4073 - 4081 10.1021/acssuschemeng.1c05133
Genome mining reveals high biosynthetic potential of biocontrol agent Bacillus velezensis B.BV10
Genes 13 (11), art. 1984 10.3390/genes13111984
Effect of temperature on microbial reductive dehalogenation of chlorinated ethenes: a review
FEMS Microbiol. Ecol. 98 (9), fiac081 10.1093/femsec/fiac081
Sulfidic acetate mineralization at 45°C by an aquifer microbial community: key players and effects of heat changes on activity and community structure
Environ. Microbiol. 24 (1), 370 - 389 10.1111/1462-2920.15852
Fluorescence lifetime activated droplet sorting (FLADS) for label-free sorting of Synechocystis sp. PCC6803
Lab Chip 22 (8), 1604 - 1614 10.1039/d2lc00032f
Exploiting unconventional prokaryotic hosts for industrial biotechnology
Trends Biotechnol. 40 (4), 385 - 397 10.1016/j.tibtech.2021.08.003
The sRNA NsiR4 fine-tunes arginine synthesis in the cyanobacterium Synechocystis sp. PCC 6803 by post-transcriptional regulation of PirA
RNA Biol. 19 (1), 811 - 818 10.1080/15476286.2022.2082147
The transcriptional regulator RbcR controls ribulose-1,5-bisphosphate carboxylase/oxygenase (RuBisCO) genes in the cyanobacterium Synechocystis sp. PCC 6803
New Phytol. 235 (2), 432 - 445 10.1111/nph.18139
Information theory for biological sequence classification: A novel feature extraction technique based on Tsallis entropy
Entropy 24 (10), art. 1398 10.3390/e24101398
BioAutoML: automated feature engineering and metalearning to predict noncoding RNAs in bacteria
Brief. Bioinform. 23 (4), bbac218 10.1093/bib/bbac218
Whole-genome sequence of the filamentous diazotrophic cyanobacterium Tolypothrix sp. PCC 7712 and its comparison with non-diazotrophic Tolypothrix sp. PCC 7601
Front. Microbiol. 13 , art. 1042437 10.3389/fmicb.2022.1042437
Evaluation of self-sustaining cyanobacterial biofilms for technical applications
Biofilm 4 , art. 100073 10.1016/j.bioflm.2022.100073
Rational orthologous pathway and biochemical process engineering for adipic acid production using Pseudomonas taiwanensis VLB120
Metab. Eng. 70 , 206 - 217 10.1016/j.ymben.2022.01.014
Integrated wastewater management for the protection of vulnerable water resources in the north of Jordan
Sustainability 14 (6), art. 3574 10.3390/su14063574
Automatic, fast, hierarchical, and non-overlapping gating of flow cytometric data with flowEMMi v2
Comp. Struct. Biotechnol. J. 20 , 6473 - 6489 10.1016/j.csbj.2022.11.033
From modular decomposition trees to rooted median graphs
Discrete Appl. Math. 310 , 1 - 9 10.1016/j.dam.2021.12.017
Expanding the calibration range of compound-specific chlorine isotope analysis by the preparation of a 37Cl-enriched tetrachloroethylene
Rapid Commun. Mass Spectrom. 36 (21), e9378 10.1002/rcm.9378
Green citric acid in the sorption process of rare earth elements
Chem. Eng. J. 437, Part 2 , art. 135366 10.1016/j.cej.2022.135366
Succession in the caecal microbiota of developing broilers colonised by extended-spectrum β-lactamase-producing Escherichia coli
Animal Microbiome 4 , art. 51 10.1186/s42523-022-00199-4
New paradigms for familiar diseases: Lessons learned on circulatory bacterial signatures in cardiometabolic diseases
Exp. Clin. Endocrinol. Diabet. 130 (5), 313 - 326 10.1055/a-1756-4509
Gaseous NO2 induces various envelope alterations in Pseudomonas fluorescens MFAF76a
Sci. Rep. 12 , art. 8528 10.1038/s41598-022-11606-w
Genome and proteome analyses show the gaseous alkane degrader Desulfosarcina sp. strain
Environ. Microbiol. 24 (4), 1964 - 1976 10.1111/1462-2920.15956
Deciphering the fate of sulfate in one- and two-chamber bioelectrochemical systems
Electrochim. Acta 408 , art. 139942 10.1016/j.electacta.2022.139942
A method proposal for throughfall measurement in grassland at plot scale in temperate climate: ‘Interception tubes’
Front. Earth Sci. 10 , art. 799419 10.3389/feart.2022.799419
Metallomics of the quinone-free respiration system of Dehalococcoides mccartyi indicates the presence of molybdenum, nickel, iron and cobalt in the respiratory complex
Biochim. Biophys. Acta-Bioenerg. 1863 (Suppl.), art. 148768 10.1016/j.bbabio.2022.148768
Applicability and information value of biocalorimetry for the monitoring of fungal solid-state fermentation of lignocellulosic agricultural by-products
New Biotech. 66 , 97 - 106 10.1016/j.nbt.2021.11.001
Fungal lignocellulose utilization strategies from a bioenergetic perspective: Quantification of related functional traits using biocalorimetry
Microorganisms 10 (8), art. 1675 10.3390/microorganisms10081675
Structure and functional capacity of a benzene‐mineralizing, nitrate‐reducing microbial community
J. Appl. Microbiol. 132 (4), 2795 - 2811 10.1111/jam.15443
Redox mediators in microbial electrochemical systems
ChemElectroChem 9 (13), e202200216 10.1002/celc.202200216
Pore-scale heterogeneities improve the degradation of a self-inhibiting substrate: Insights from reactive transport modeling
Environ. Sci. Technol. 56 (18), 13008 - 13018 10.1021/acs.est.2c01433
amirgolp/P3D-BRNS: v0.1.0-beta
Zenodo 10.5281/zenodo.6301317
Enrichment of anaerobic microbial communities from midgut and hindgut of sun beetle larvae (Pachnoda marginata) on wheat straw: effect of inoculum preparation
Microorganisms 10 (4), art. 761 10.3390/microorganisms10040761
Heterologous lactate synthesis in Synechocystis sp. strain PCC 6803 causes a growth condition-dependent carbon sink effect
Appl. Environ. Microb. 88 (8), e00063-22 10.1128/aem.00063-22
Absolute_GeneCopyNumbers_qPCR [Dataset]
figshare 10.6084/m9.figshare.20310003.v1
The role of microbes in the increase of organic phosphorus availability in the rhizosheath of cover crops
Plant Soil 476 (1-2), 353 - 373 10.1007/s11104-022-05340-5
Lockdown amid COVID-19 ascendancy over ambient particulate matter pollution anomaly
Int. J. Environ. Res. Public Health 19 (20), art. 13540 10.3390/ijerph192013540
The role of abiotic variables in an emerging global amphibian fungal disease in mountains
Sci. Total Environ. 815 , art. 152735 10.1016/j.scitotenv.2021.152735
Editorial: Current and future trends in adsorption for environmental separations
J. Hazard. Mater. 433 , art. 128776 10.1016/j.jhazmat.2022.128776
Key factors controlling microbial distribution on a DNAPL source area
Environ. Sci. Pollut. Res. 29 (1), 1508 - 1520 10.1007/s11356-021-15635-2
Power-to-methane – Design and optimization of two new bubble column reactors
Chem. Ing. Tech. 94 (9), 1323 - 1323 10.1002/cite.202255250
Integrated genomic surveillance enables tracing of person-to-person SARS-CoV-2 transmission chains during community transmission and reveals extensive onward transmission of travel-imported infections, Germany, June to July 2021
Eurosurveillance 27 (43), art. 2101089 10.2807/1560-7917.ES.2022.27.43.2101089
Valorisation of microalgae residues after lipid extraction: Pyrolysis characteristics for biofuel production
Biochem. Eng. J. 179 , art. 108330 10.1016/j.bej.2021.108330
Soil conditioners improve rhizodegradation of aged petroleum hydrocarbons and enhance the growth of Lolium multiflorum
Environ. Sci. Pollut. Res. 29 (6), 9097 - 9109 10.1007/s11356-021-16149-7
Morpho-physiological response of barley to assess genotypic differences of salinity tolerance under hyper arid climate
Agric. Water Manage. 272 , art. 107832 10.1016/j.agwat.2022.107832
An annotated inventory of Tanzanian medicinal plants traditionally used for the treatment of respiratory bacterial infections
Plants 11 (7), art. 931 10.3390/plants11070931
Microbial | electrochemical CO2 reduction: To integrate or not to integrate?
Joule 6 (5), 935 - 940 10.1016/j.joule.2022.04.005
What is the role of individual species within bidirectional electroactive microbial biofilms: A case study on Desulfarculus baarsii and Desulfurivibrio alkaliphilus
ChemElectroChem 9 (2), e202101116 10.1002/celc.202101116
From gut to mud: dissemination of antimicrobial resistance between animal and agricultural niches
Environ. Microbiol. 24 (8), 3290 - 3306 10.1111/1462-2920.15927
Eggerthella lenta DSM 2243 alleviates bile acid stress response in Clostridium ramosum and Anaerostipes caccae by transformation of bile acids
Microorganisms 10 (10), art. 2025 10.3390/microorganisms10102025
Microcosm test for pesticide fate assessment in planted water filters: 13C,15N-labeled glyphosate as an example
Water Res. 226 , art. 119211 10.1016/j.watres.2022.119211
Effects of sewage sludge hydrochar on emissions of the climate-relevant trace gases N2O and CO2 from loamy sand soil
Heliyon 8 (10), e10855 10.1016/j.heliyon.2022.e10855
The community ecology perspective of omics data
Microbiome 10 , art. 225 10.1186/s40168-022-01423-8
Potential of microbiome-based solutions for agrifood systems
Nat. Food 3 (8), 557 - 560 10.1038/s43016-022-00576-x
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Environ. Microbiome 17 , art. 57 10.1186/s40793-022-00449-7
Development and validation of a simple, selective, and accurate reversed-phase liquid chromatographic method with diode array detection (RP-HPLC/DAD) for the simultaneous analysis of 18 free amino acids in topical formulations
Chromatographia 85 (7), 665 - 676 10.1007/s10337-022-04160-0
Lagrangian profiles of riverine autotrophy, organic matter transformation, and micropollutants at extreme drought
Sci. Total Environ. 828 , art. 154243 10.1016/j.scitotenv.2022.154243
Extracellular vesicles of mesenchymal stromal cells can be taken up by microglial cells and partially prevent the stimulation induced by β-amyloid
Stem Cell Rev. Rep. 18 (3), 1113 - 1126 10.1007/s12015-021-10261-4
Water stress-driven changes in bacterial cell surface properties
Appl. Environ. Microb. 88 (21), e00732-22 10.1128/aem.00732-22
Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
Microbiome 10 , art. 151 10.1186/s40168-022-01343-7
Phase-specific stable isotope fractionation effects during combined gas-liquid phase exchange and biodegradation
Environ. Pollut. 309 , art. 119737 10.1016/j.envpol.2022.119737
Draft genome sequences of two Sphingobium species associated with hexachlorocyclohexane (HCH) degradation isolated from an HCH-contaminated soil
Microbiol. Resour. Ann. 11 (3), e00886-21 10.1128/mra.00886-21
Should we worry about surficial dynamics when assessing nutrient cycling in the groundwater?
Front. Water 4 , art. 780297 10.3389/frwa.2022.780297
Predicting the impact of spatial heterogeneity on microbially mediated nutrient cycling in the subsurface
Biogeosciences 19 (3), 665 - 688 10.5194/bg-19-665-2022
Editorial: Thematic issue on anaerobic biological dehalogenation
FEMS Microbiol. Ecol. 98 (11), fiac108 10.1093/femsec/fiac108
Cellular stress affects the fate of microbial resistance to folate inhibitors in treatment wetlands
Sci. Total Environ. 845 , art. 157318 10.1016/j.scitotenv.2022.157318
Functional stability of novel homogeneous and heterogeneous cation exchange membranes for abiotic and microbial electrochemical technologies
J. Membr. Sci. 658 , art. 120705 10.1016/j.memsci.2022.120705
Electrochemical and microbial dissection of electrified biotrickling filters
Front. Microbiol. 13 , art. 869474 10.3389/fmicb.2022.869474
The meristem-associated endosymbiont Methylorubrum extorquens DSM13060 reprograms development and stress responses of pine seedlings
Tree Physiol. 42 (2), 391 - 410 10.1093/treephys/tpab102
MAIT cell activation is reduced by direct and microbiota-mediated exposure to bisphenols
Environ. Int. 158 , art. 106985 10.1016/j.envint.2021.106985
Electrochemical microwell plate to study electroactive microorganisms in parallel and real-time
Front. Bioeng. Biotechnol. 10 , art. 821734 10.3389/fbioe.2021.821734
Design and construction of 3D printed devices to investigate active and passive bacterial dispersal on hydrated surfaces
BMC Biol. 20 , art. 203 10.1186/s12915-022-01406-z
Editorial: Electrobiotechnology towards sustainable bioeconomy: Fundamental, optimization and applications
Front. Bioeng. Biotechnol. 10 , art. 901072 10.3389/fbioe.2022.901072
Environmental risk of arsenic mobilization from disposed sand filter materials
Environ. Sci. Technol. 56 (23), 16822 - 16830 10.1021/acs.est.2c04915
Enhancing bioenergy production from the raw and defatted microalgal biomass using wastewater as the cultivation medium
Bioengineering-Basel 9 (11), art. 637 10.3390/bioengineering9110637
Cultivation of microalgae in adjusted wastewater to enhance biofuel production and reduce environmental impact: Pyrolysis performances and life cycle assessment
J. Clean Prod. 355 , art. 131768 10.1016/j.jclepro.2022.131768
Stabilizing microbial communities by looped mass transfer
Proc. Natl. Acad. Sci. U.S.A. 119 (17), e2117814119 10.1073/pnas.2117814119
The impact of the antibiotic fosfomycin on wastewater communities measured by flow cytometry
Front. Microbiol. 12 , art. 737831 10.3389/fmicb.2021.737831
Acetyl-CoA-Carboxylase 1-mediated de novo fatty acid synthesis sustains Lgr5+ intestinal stem cell function
Nat. Commun. 13 , art. 3998 10.1038/s41467-022-31725-2
Machine learning-assisted identification of bioindicators predicts medium-chain carboxylate production performance of an anaerobic mixed culture
Microbiome 10 , art. 48 10.1186/s40168-021-01219-2
Stable isotope fractionation associated with the synthesis of hexachlorocyclohexane isomers for characterizing sources
Chemosphere 296 , art. 133938 10.1016/j.chemosphere.2022.133938
Uptake and metabolization of HCH isomers in trees examined over an annual growth period by compound-specific isotope analysis and enantiomer fractionation
Environ. Sci. Technol. 56 (14), 10120 - 10130 10.1021/acs.est.2c02697
Characterization of hexachlorocyclohexane isomer dehydrochlorination by LinA1 and LinA2 using multi-element compound-specific stable isotope analysis
Environ. Sci. Technol. 56 (23), 16848 - 16856 10.1021/acs.est.2c05334
IncP-type plasmids carrying genes for antibiotic resistance or for aromatic compound degradation are prevalent in sequenced Aromatoleum and Thauera strains
Environ. Microbiol. 24 (12), 6411 - 6425 10.1111/1462-2920.16262
Stable hydrogen isotope fractionation of hydrogen in a field injection experiment: Simulation of a gaseous H2 leakage
ACS Earth Space Chem. 6 (3), 631 - 641 10.1021/acsearthspacechem.1c00254
Effect of inoculum microbial diversity in ex situ biomethanation of hydrogen
Bioengineering-Basel 9 (11), art. 678 10.3390/bioengineering9110678
Physiological effects of 2-bromoethanesulfonate on hydrogenotrophic pure and mixed cultures
Microorganisms 10 (2), art. 355 10.3390/microorganisms10020355
Global distribution of carbohydrate utilization potential in the prokaryotic tree of life
mSystems 7 (6), e00829-22 10.1128/msystems.00829-22
Dual character of methane production improvement and antibiotic resistance genes reduction by nano-Fe2O3 addition during anaerobic digestion of swine manure
J. Clean Prod. 376 , art. 134240 10.1016/j.jclepro.2022.134240
Coupled mechanism of enhanced and inhibitory effects of nanoscale zero-valent iron on methane production and antibiotic resistance genes in anaerobic digestion of swine manure
Bioresour. Technol. 360 , art. 127635 10.1016/j.biortech.2022.127635
Biodiversity loss and climate extremes — study the feedbacks
Nature 612 (7938), 30 - 32 10.1038/d41586-022-04152-y
Analysis of carbon and hydrogen stable isotope ratios of phenolic compounds: method development and biodegradation applications
ACS ES&T Water 2 (1), 32 - 39 10.1021/acsestwater.1c00218
Template synthesis of luminescent oligoperoxide coated YBO3 nanoparticles doped with Ce3+, Tb3+ and Eu3+ ions
Opt. Mater. 124 , art. 112008 10.1016/j.optmat.2022.112008
Controlling microbial co-culture based on substrate pulsing can lead to stability through differential fitness advantages
PLoS Comput. Biol. 18 (10), e1010674 10.1371/journal.pcbi.1010674
Spatial patterns of microbial diversity in Fe-Mn deposits and associated sediments in the Atlantic and Pacific oceans
Sci. Total Environ. 837 , art. 155792 10.1016/j.scitotenv.2022.155792
Compound-specific isotopic analysis to characterize the photocatalytic reaction of TiO2 nanoparticles with diethyl phthalate
Chemosphere 307, Part 4 , art. 135892 10.1016/j.chemosphere.2022.135892
Isotope fractionation of diethyl phthalate during oxidation degradation by persulfate activated with zero-valent iron
Chem. Eng. J. 435, Part 1 , art. 132132 10.1016/j.cej.2021.132132
Microbial community composition and glyphosate degraders of two soils under the influence of temperature, total organic carbon and pH
Environ. Pollut. 297 , art. 118790 10.1016/j.envpol.2022.118790
Next-generation graphene oxide additives composite membranes for emerging organic micropollutants removal: Separation, adsorption and degradation
Chemosphere 308, Part 3 , art. 136333 10.1016/j.chemosphere.2022.136333
Microbial ecology of sulfur biogeochemical cycling at a mesothermal hot spring atop Northern Himalayas, India
Front. Microbiol. 13 , art 848010 10.3389/fmicb.2022.848010
Hetero-coupling of bio-based medium chain carboxylic acids by Kolbe electrolysis enables high fuel yield and efficiency
ChemSusChem 15 (21), e202201426 10.1002/cssc.202201426
Spatial characterization of microbial sulfur cycling in horizontal-flow constructed wetland models
Chemosphere 309, Part 1 , art. 136605 10.1016/j.chemosphere.2022.136605
Evapotranspiration dynamics in aerated and non-aerated subsurface flow treatment wetlands
Sci. Total Environ. 843 , art. 156605 10.1016/j.scitotenv.2022.156605
PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning
Environ. Microbiome 17 , art. 7 10.1186/s40793-021-00394-x
Generation of synthetic shuttle vectors enabling modular genetic engineering of cyanobacteria
ACS Synth. Biol. 11 (5), 1758 - 1771 10.1021/acssynbio.1c00605
Compound specific isotope analysis in hydrogeology
J. Hydrol. 615, Part A , art. 128588 10.1016/j.jhydrol.2022.128588
Investigation of active site amino acid influence on carbon and chlorine isotope fractionation during reductive dechlorination
FEMS Microbiol. Ecol. 98 (8), fiac072 10.1093/femsec/fiac072
Widespread ability of ligninolytic fungi to degrade hazardous organic pollutants as the basis for the self-purification ability of natural ecosystems and for mycoremediation technologies
Appl. Sci. 12 (4), art. 2164 10.3390/app12042164
Extracellular degradation of a polyurethane oligomer involving outer membrane vesicles and further insights on the degradation of 2,4-diaminotoluene in Pseudomonas capeferrum TDA1
Sci. Rep. 12 , art. 2666 10.1038/s41598-022-06558-0
Enhanced degradation of perfluorooctanoic acid by heat-activated persulfate in the presence of zeolites
Chem. Eng. J. 429 , art. 132500 10.1016/j.cej.2021.132500
Exploring the extent of phosphorus and heavy metal uptake by single cells of Saccharomyces cerevisiae and their effects on intrinsic elements by SC-ICP-TOF-MS
Front. Microbiol. 13 , art. 870931 10.3389/fmicb.2022.870931
Adaptation and resistance: How Bacteroides thetaiotaomicron copes with the bisphenol A substitute bisphenol F
Microorganisms 10 (8), art. 1610 10.3390/microorganisms10081610
Co-fermenting pyrolysis aqueous condensate and pyrolysis syngas with anaerobic microbial communities enables L-malate production in a secondary fermentative stage
Fermentation 8 (10), art. 512 10.3390/fermentation8100512
Long-range catalytic hydrodechlorination of preadsorbed DDT at ambient temperature
Appl. Catal. B-Environ. 304 , art. 120966 10.1016/j.apcatb.2021.120966
Some mistakes and misinterpretations in the analysis of thermodynamic adsorption data
J. Mol. Liq. 352 , art. 118762 10.1016/j.molliq.2022.118762
Thickness and roughness of transparent gold-palladium anodes have no impact on growth kinetics and yield coefficients of early-stage Geobacter sulfurreducens biofilms
Bioelectrochemistry 144 , art. 108043 10.1016/j.bioelechem.2021.108043
Towards real-time determination of yield coefficients of early-stage electroactive biofilms using optical microscopy
Front. Energy Res. 10 , art. 920266 10.3389/fenrg.2022.920266
Scientists' warning of threats to mountains
Sci. Total Environ. 853 , art. 158611 10.1016/j.scitotenv.2022.158611
The EU chemicals strategy for sustainability: an opportunity to develop new approaches for hazard and risk assessment
Arch. Toxicol. 96 (8), 2381 - 2386 10.1007/s00204-022-03313-2
Polyphasic analysis reveals potential petroleum hydrocarbon degradation and biosurfactant production by rare biosphere thermophilic bacteria from Deception Island, an active Antarctic volcano
Front. Microbiol. 13 , art. 885557 10.3389/fmicb.2022.885557
Structural analysis of microbiomes from salt caverns used for underground gas storage
Int. J. Hydrog. Energy 47 (47), 20684 - 20694 10.1016/j.ijhydene.2022.04.170
Spatial control of microbial pesticide degradation in soil: A model-based scenario analysis
Environ. Sci. Technol. 56 (20), 14427 - 14438 10.1021/acs.est.2c03397
Borohydride and metallic copper as a robust dehalogenation system: Selectivity assessment and system optimization
Sci. Total Environ. 810 , art. 152065 10.1016/j.scitotenv.2021.152065
An in vitro reconstitution system to monitor iron transfer to the active site during the maturation of [NiFe]-hydrogenase
J. Biol. Chem. 298 (9), art. 102291 10.1016/j.jbc.2022.102291
Impact of various aeration strategies on the removal of micropollutants and biological effects in aerated horizontal flow treatment wetlands
Sci. Total Environ. 828 , art. 154423 10.1016/j.scitotenv.2022.154423
Detecting thresholds of ecological change in the anthropocene
Annu. Rev. Environ. Resour. 47 , 797 - 821 10.1146/annurev-environ-112420-015910
Opposite sides of Pantoea agglomerans and its associated commercial outlook
Microorganisms 10 (10), art. 2072 10.3390/microorganisms10102072
Heterogeneous activation of persulfate by FeS – Surface influence on selectivity
Chem. Eng. J. 450, Part 3 , art. 138192 10.1016/j.cej.2022.138192
Toward improved bioremediation strategies: Response of BAM-degradation activity to concentration and flow changes in an inoculated bench-scale sediment tank
Environ. Sci. Technol. 56 (7), 4050 - 4061 10.1021/acs.est.1c05259
Iron corrosion by methanogenic archaea characterized by stable isotope effects and crust mineralogy
Environ. Microbiol. 24 (2), 583 - 595 10.1111/1462-2920.15658
Upgrading Kolbe electrolysis – Highly efficient production of green fuels and solvents by coupling biosynthesis and electrosynthesis
Angew. Chem.-Int. Edit. 61 (50), e202210596 10.1002/anie.202210596
Exploitation of hetero- and phototrophic metabolic modules for redox-intensive whole-cell biocatalysis
Front. Bioeng. Biotechnol. 10 , art. 855715 10.3389/fbioe.2022.855715
Critical evaluation of the microbial turnover to biomass approach for the estimation of biogenic non-extractable residues (NER)
Environ. Sci. Eur. 34 , art. 15 10.1186/s12302-022-00592-5
Insights into the syntrophic microbial electrochemical oxidation of toluene: a combined chemical, electrochemical, taxonomical, functional gene-based, and metaproteomic approach
Sci. Total Environ. 850 , art. 157919 10.1016/j.scitotenv.2022.157919
Syntrophy drives the microbial electrochemical oxidation of toluene in a continuous-flow “bioelectric well”
J. Environ. Chem. Eng. 10 (3), art. 107799 10.1016/j.jece.2022.107799
Ensiling parameters in vertical columns and multiple kinetic models evaluation of biomethane potential of ensiled sugar beet leaves
Biofuels-UK 13 (8), 995 - 1005 10.1080/17597269.2022.2059964
Nutritional inter-dependencies and a carbazole-dioxygenase are key elements of a bacterial consortium relying on a Sphingomonas for the degradation of the fungicide thiabendazole
Environ. Microbiol. 24 (11), 5105 - 5122 10.1111/1462-2920.16116
Characterization of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection clusters based on integrated genomic surveillance, outbreak analysis and contact tracing in an urban setting
Clin. Infect. Dis. 74 (6), 1039 - 1046 10.1093/cid/ciab588
Enhanced perchloroethene dechlorination by humic acids via increasing the dehalogenase activity of Dehalococcoides strains
FEMS Microbiol. Ecol. 98 (4), fiac034 10.1093/femsec/fiac034
Thermophilic composting of human feces: Development of bacterial community composition and antimicrobial resistance gene pool
Front. Microbiol. 13 , art. 824834 10.3389/fmicb.2022.824834
Metagenomic insights into the changes of antibiotic resistance and pathogenicity factor pools upon thermophilic composting of human excreta
Front. Microbiol. 13 , art. 826071 10.3389/fmicb.2022.826071
Quantification of biocatalytic transformations by single microbial cells enabled by tailored integration of droplet microfluidics and mass spectrometry
Angew. Chem.-Int. Edit. 61 (29), e202204098 10.1002/anie.202204098
Impact of fungal hyphae on growth and dispersal of obligate anaerobic bacteria in aerated habitats
mBio 13 (3), e00769-22 10.1128/mbio.00769-22
pH distribution along growing fungal hyphae at microscale
J. Fungi 8 (6), art. 599 10.3390/jof8060599
Transport of marine tracer phage particles in soil
Sci. Total Environ. 814 , art. 152704 10.1016/j.scitotenv.2021.152704
Phage co-transport with hyphal-riding bacteria fuels bacterial invasion in a water-unsaturated microbial model system
ISME J. 16 (5), 1275 - 1283 10.1038/s41396-021-01155-x
Mycelia-assisted isolation of non-host bacteria able to co-transport phages
Viruses 14 (2), art. 195 10.3390/v14020195
Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA
J. Biol. Chem. 298 (1), art. 101522 10.1016/j.jbc.2021.101522
Translational fidelity and growth of Arabidopsis require stress-sensitive diphthamide biosynthesis
Nat. Commun. 13 , art. 4009 10.1038/s41467-022-31712-7
Ferric chloride further simplified the horizontal gene transfer network of antibiotic resistance genes in anaerobic digestion
Sci. Total Environ. 844 , art. 157054 10.1016/j.scitotenv.2022.157054
“Potentially toxic element”─Something that means everything means nothing
Environ. Sci. Technol. 56 (17), 11922 - 11925 10.1021/acs.est.2c03056
Diversity of organohalide respiring bacteria and reductive dehalogenases that detoxify polybrominated diphenyl ethers in E-waste recycling sites
ISME J. 16 (9), 2123 - 2131 10.1038/s41396-022-01257-0
Efficient removal of trifluoroacetic acid from water using surface-modified activated carbon and electro-assisted desorption
J. Hazard. Mater. 436 , art. 129051 10.1016/j.jhazmat.2022.129051
Electro-assisted removal of polar and ionic organic compounds from water using activated carbon felts
Chem. Eng. J. 433, Part 2 , art. 133544 10.1016/j.cej.2021.133544
Core–shell polydopamine/Cu nanometer rods efficiently deactivate microbes by mimicking chloride-activated peroxidases
ACS Omega 7 (34), 29984 - 29994 10.1021/acsomega.2c029862021 (135)
Quality control of direct cell-mineral adhesion measurements in air and liquid using inverse AFM imaging
RSC Advances 11 (10), 5384 - 5392 10.1039/d1ra00110h
Fungi in PAH-contaminated marine sediments: Cultivable diversity and tolerance capacity towards PAH
Mar. Pollut. Bull. 164 , art. 112082 10.1016/j.marpolbul.2021.112082
Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients
Genome Med. 13 , art. 7 10.1186/s13073-020-00823-5
Effect of oxygen contamination on propionate and caproate formation in anaerobic fermentation
Front. Bioeng. Biotechnol. 9 , art. 725443 10.3389/fbioe.2021.725443
Hydrogen as a co-electron donor for chain elongation with complex communities
Front. Bioeng. Biotechnol. 9 , art. 650631 10.3389/fbioe.2021.650631
Microbial identification, high-resolution microscopy and spectrometry of the rhizosphere in its native spatial context
Front. Plant Sci. 12 , art. 668929 10.3389/fpls.2021.668929
Towards robust Pseudomonas cell factories to harbour novel biosynthetic pathways
Essays Biochem. 65 (2), 319 - 336 10.1042/EBC20200173
The novel PII-interacting protein PirA controls flux into the cyanobacterial ornithine-ammonia cycle
mBio 12 (2), e00229-21 10.1128/mBio.00229-21
A downstream processing cascade for separation of caproic and caprylic acid from maize silage-based fermentation broth
Front. Bioeng. Biotechnol. 9 , art. 725578 10.3389/fbioe.2021.725578
Characterization of different biocatalyst formats for BVMO‐catalyzed cyclohexanone oxidation
Biotechnol. Bioeng. 118 (7), 2719 - 2733 10.1002/bit.27791
One-pot synthesis of 6-aminohexanoic acid from cyclohexane using mixed-species cultures
Microb. Biotechnol. 14 (3), 1011 - 1025 10.1111/1751-7915.13744
Characterization of membrane-bound metalloproteins in the anaerobic ammonium-oxidizing bacterium “Candidatus Kuenenia stuttgartiensis” strain CSTR1
Talanta 223 (Part 2), art. 121711 10.1016/j.talanta.2020.121711
Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean)
Sci. Total Environ. 770 , art. 145252 10.1016/j.scitotenv.2021.145252
Retention and distribution of pesticides in planted filter microcosms designed for treatment of agricultural surface runoff
Sci. Total Environ. 778 , art. 146114 10.1016/j.scitotenv.2021.146114
Metabolic history and metabolic fitness as drivers of anabolic heterogeneity in isogenic microbial populations
Environ. Microbiol. 23 (11), 6764 - 6776 10.1111/1462-2920.15756
An optimized method for RNA extraction from the polyurethane oligomer degrading strain Pseudomonas capeferrum TDA1 growing on aromatic substrates such as phenol and 2,4-diaminotoluene
PLOS One 16 (11), e0260002 10.1371/journal.pone.0260002
Electro-bioremediation of nitrate and arsenite polluted groundwater
Water Res. 190 , art. 116748 10.1016/j.watres.2020.116748
Circulating bacterial signature is linked to metabolic disease and shifts with metabolic alleviation after bariatric surgery
Genome Med. 13 , art. 105 10.1186/s13073-021-00919-6
Novel clades of soil biphenyl degraders revealed by integrating isotope probing, multi-omics, and single-cell analyses
ISME J. 15 (12), 3508 - 3521 10.1038/s41396-021-01022-9
Mechanistic insights into fast adsorption of perfluoroalkyl substances on carbonate-layered double hydroxides
J. Hazard. Mater. 408 , art. 124815 10.1016/j.jhazmat.2020.124815
General statistical scaling laws for stability in ecological systems
Ecol. Lett. 24 (7), 1474 - 1486 10.1111/ele.13760
Community and single cell analyses reveal complex predatory interactions between bacteria in high diversity systems
Nat. Commun. 12 , art. 5481 10.1038/s41467-021-25824-9
Impact of surface properties of porous SiOC‐based materials on the performance of Geobacter biofilm anodes
ChemElectroChem 8 (5), 850 - 857 10.1002/celc.202001568
Effects of combined tannic acid/fluoride on sulfur transformations and methanogenic pathways in swine manure
PLOS One 16 (9), art. e0257759 10.1371/journal.pone.0257759
Subcellular architecture and metabolic connection in the planktonic photosymbiosis between Collodaria (radiolarians) and their microalgae
Environ. Microbiol. 23 (11), 6569 - 6586 10.1111/1462-2920.15766
Evaluation of two methods to concentrate SARS-CoV-2 from untreated wastewater
Pathogens 10 (2), art. 195 10.3390/pathogens10020195
The metabolic flux probe (MFP)—Secreted protein as a non-disruptive information carrier for 13C-based metabolic flux analysis
Int. J. Mol. Sci. 22 (17), art. 9438 10.3390/ijms22179438
Benefits of age–Improved resistance of mature electroactive biofilm anodes in anaerobic digestion
Environ. Sci. Technol. 55 (12), 8258 - 8266 10.1021/acs.est.0c07320
Anaerobic benzene mineralization by natural microbial communities from Niger Delta
Biodegradation 32 (1), 37 - 52 10.1007/s10532-020-09922-x
Coating of solid substrates with carbon via hydrothermal carbonization
Mater. Lett. 288 , art. 129315 10.1016/j.matlet.2021.129315
Numerical heat flow and transport simulation as a development tool for the design of isothermal microcalorimeters
Thermochim. Acta 706 , art. 179070 10.1016/j.tca.2021.179070
Direct analysis of fulvic acids adsorbed onto capped gold nanoparticles by laser desorption ionization Fourier-transform ion cyclotron resonance mass spectrometry
Environ. Sci.-Nano 8 (8), 2336 - 2346 10.1039/d0en01253j
Multi-element isotopic evidence for monochlorobenzene and benzene degradation under anaerobic conditions in contaminated sediments
Water Res. 207 , art. 117809 10.1016/j.watres.2021.117809
Pore-scale modeling of microbial activity: What we have and what we need
Vadose Zone J. 20 (1), e20087 10.1002/vzj2.20087
Compost fungi allow for effective dispersal of putative PGP bacteria
Agronomy-Basel 11 (8), art. 1567 10.3390/agronomy11081567
New thermodynamic activity-based approach allows predicting the feasibility of glycolysis
Sci. Rep. 11 , art. 6125 10.1038/s41598-021-85594-8
Tracking, targeting, and conserving soil biodiversity - A monitoring and indicator system can inform policy
Science 371 (6526), 239 - 241 10.1126/science.abd7926
Hydrogen from water is more than a fuel: Hydrogenations and hydrodeoxygenations for a biobased economy
Chem. Rec. 21 (9), 2277 - 2289 10.1002/tcr.202100034
First settlers persist
Joule 5 (6), 1316 - 1319 10.1016/j.joule.2021.05.022
Coupling droplet microfluidics with ion mobility spectrometry for monitoring chemical conversions at nanoliter scale
Anal. Chem. 93 (40), 13615 - 13623 10.1021/acs.analchem.1c02883
Evidence for lignocellulose-decomposing enzymes in the genome and transcriptome of the aquatic hyphomycete Clavariopsis aquatica
J. Fungi 7 (10), art. 854 10.3390/jof7100854
Wearable sensors for human environmental exposure in urban settings
Curr. Pollut. Rep. 7 (3), 417 - 433 10.1007/s40726-021-00186-4
The role of ecotones in the dehalogenation of chloroethenes in alluvial fan aquifers
Environ. Sci. Pollut. Res. 28 (21), 26871 - 26884 10.1007/s11356-021-12538-0
Pseudomonas taiwanensis biofilms for continuous conversion of cyclohexanone in drip flow and rotating bed reactors
Eng. Life Sci. 21 (3-4), 258 - 269 10.1002/elsc.202000072
Predicting the presence and abundance of bacterial taxa in environmental communities through flow cytometric fingerprinting
mSystems 6 (5), e00551-21 10.1128/mSystems.00551-21
Beyond nitrogen: phosphorus - estimating the minimum niche dimensionality for resource competition between phytoplankton
Ecol. Lett. 24 (4), 761 - 771 10.1111/ele.13695
Superabsorbent polymer as a supplement substrate of constructed wetland to retain pesticides from agricultural runoff
Water Res. 207 , art. 117776 10.1016/j.watres.2021.117776
Free amino acid contents of selected Ethiopian plant and fungi species: a search for alternative natural free amino acid sources for cosmeceutical applications
Amino Acids 53 (7), 1105 - 1122 10.1007/s00726-021-03008-5
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
Nucleic Acids Res. 49 (D1), D743 - D750 10.1093/nar/gkaa1031
Microbial necromass in soils—Linking microbes to soil processes and carbon turnover
Front. Environ. Sci. 9 , art. 756378 10.3389/fenvs.2021.756378
Monitoring of the effects of a temporally limited heat stress on microbial communities in a shallow aquifer
Sci. Total Environ. 781 , art. 146377 10.1016/j.scitotenv.2021.146377
Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
Microbiome 9 , art. 72 10.1186/s40168-021-01031-y
Draft genome sequence of Fusarium equiseti K3, a fungal species isolated from hexachlorocyclohexane-contaminated soil
Microbiol. Resour. Ann. 10 (47), e00885-21 10.1128/MRA.00885-21
Data reduced method for cost comparison of wastewater management scenarios - case study for two settlements in Jordan and Oman
Front. Environ. Sci. 9 , art. 626634 10.3389/fenvs.2021.626634
Wastewater treatment and wood production of willow system in cold climate
Water 13 (12), art. 1630 10.3390/w13121630
Management of Urban STormwater at Block-level (MUST-B): A new approach for potential analysis of decentralized stormwater management systems
Water 13 (3), art. 378 10.3390/w13030378
Integrative analysis of the salt stress response in cyanobacteria
Biol. Direct 16 , art. 26 10.1186/s13062-021-00316-4
Energy structure and luminescence of CeF3 crystals
Materials 14 (15), art. 4243 10.3390/ma14154243
Environmental-economic assessment of the pressure swing adsorption biogas upgrading technology
BioEnergy Res. 14 (3), 901 - 909 10.1007/s12155-020-10205-9
Comments on “Highly selective removal of perfluorinated contaminants by adsorption on all-silica zeolite Beta”
Angew. Chem.-Int. Edit. 60 (25), 13708 - 13709 10.1002/anie.202100231
Comment on “Thermal stability and decomposition of perfluoroalkyl substances on spent granular activated carbon”
Environ. Sci. Technol. Lett. 8 (4), 362 - 363 10.1021/acs.estlett.0c00742
Precious data from tiny samples: Revealing the correlation between energy content and the chemical oxygen demand of municipal wastewater using micro-bomb combustion calorimetry
Front. Energy Res. 9 , art. 705800 10.3389/fenrg.2021.705800
Microfluidic device for concentration and SERS‐based detection of bacteria in drinking water
Electrophoresis 42 (1-2), 86 - 94 10.1002/elps.202000048
Early IFN-α signatures and persistent dysfunction are distinguishing features of NK cells in severe COVID-19
Immunity 54 (11), 2650 - 2669.e14 10.1016/j.immuni.2021.09.002
Electrochemical impedance spectroscopy on biofilm electrodes – conclusive or euphonious?
Curr. Opin. Electrochem. 29 , art. 100757 10.1016/j.coelec.2021.100757
Interspecies metabolite transfer and aggregate formation in a co-culture of Dehalococcoides and Sulfurospirillum dehalogenating tetrachloroethene to ethene
ISME J. 15 (6), 1794 - 1809 10.1038/s41396-020-00887-6
Inside front cover image, Volume 118, Number 7, July 2021
Biotechnol. Bioeng. 118 (7), ii - ii 10.1002/bit.27411
Technical-scale biophotovoltaics for long-term photo-current generation from Synechocystis sp. PCC6803
Biotechnol. Bioeng. 118 (7), 2637 - 2648 10.1002/bit.27784
How to go beyond C1 products with electrochemical reduction of CO2
Sustain. Energ. Fuels 5 (23), 5893 - 5914 10.1039/d1se00861g
Pesticides are the dominant stressors for vulnerable insects in lowland streams
Water Res. 201 , art. 117262 10.1016/j.watres.2021.117262
Uptake of α-HCH by wheat from the gas phase and translocation to soil analyzed by a stable carbon isotope labeling experiment
Chemosphere 264 (Part 2), art. 128489 10.1016/j.chemosphere.2020.128489
Soil from a hexachlorocyclohexane contaminated field site inoculates wheat in a pot experiment to facilitate the microbial transformation of β-hexachlorocyclohexane examined by compound-specific isotope analysis
Environ. Sci. Technol. 55 (20), 13812 - 13821 10.1021/acs.est.1c03322
Characterizing the biotransformation of hexachlorocyclohexanes in wheat using compound-specific stable isotope analysis and enantiomer fraction analysis
J. Hazard. Mater. 406 , art. 124301 10.1016/j.jhazmat.2020.124301
Microbial communities in flexible biomethanation of hydrogen are functionally resilient upon starvation
Front. Microbiol. 12 , art. 619632 10.3389/fmicb.2021.619632
Rewiring cyanobacterial photosynthesis by the implementation of an oxygen-tolerant hydrogenase
Metab. Eng. 68 , 199 - 209 10.1016/j.ymben.2021.10.006
Extending the dimensions of personal exposure assessment: A methodological discussion on perceived and measured noise and air pollution in traffic
J. Transp. Geogr. 93 , art. 103085 10.1016/j.jtrangeo.2021.103085
The MALINA oceanographic expedition: how do changes in ice cover, permafrost and UV radiation impact biodiversity and biogeochemical fluxes in the Arctic Ocean?
Earth Syst. Sci. Data 13 (4), 1561 - 1592 10.5194/essd-13-1561-2021
High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumers
Commun. Biol. 4 , art. 530 10.1038/s42003-021-01948-y
Temperature management potentially affects carbon mineralization capacity and microbial community composition of a shallow aquifer
FEMS Microbiol. Ecol. 97 (2), fiaa261 10.1093/femsec/fiaa261
Compound specific isotope analysis to characterize degradation mechanisms of p-chloroaniline by persulfate at ambient temperature
Chem. Eng. J. 419 , art. 129526 10.1016/j.cej.2021.129526
The effect of allicin on the proteome of SARS-CoV-2 infected Calu-3 cells
Front. Microbiol. 12 , art. 746795 10.3389/fmicb.2021.746795
Benzene degradation in contaminated aquifers: Enhancing natural attenuation by injecting nitrate
J. Contam. Hydrol. 238 , art. 103759 10.1016/j.jconhyd.2020.103759
Making sense of gas measurements: quantification of multicomponent gas mixtures in biological and chemical laboratory experiments
ChemTexts 7 (4), art. 27 10.1007/s40828-021-00151-0
Platinized titanium as alternative cost-effective anodes for the efficient Kolbe electrolysis in aqueous electrolyte solutions
ChemSusChem 14 (15), 3097 - 3109 10.1002/cssc.202100854
The anoxic electrode-driven fructose catabolism of Pseudomonas putida KT2440
Microb. Biotechnol. 14 (4), 1784 - 1796 10.1111/1751-7915.13862
Characterization of putative circular plasmids in sponge‐associated bacterial communities using a selective multiply‐primed rolling circle amplification
Mol. Ecol. Resour. 21 (1), 110 - 121 10.1111/1755-0998.13248
Anaerobic transformation and detoxification of sulfamethoxazole by sulfate-reducing enrichments and Desulfovibrio vulgaris
Environ. Sci. Technol. 55 (1), 271 - 282 10.1021/acs.est.0c03407
A biogeochemical–hydrological framework for the role of redox-active compounds in aquatic systems
Nat. Geosci. 14 (5), 264 - 272 10.1038/s41561-021-00742-z
Electrifying biotrickling filters for the treatment of aquaponics wastewater
Bioresour. Technol. 319 , art. 124221 10.1016/j.biortech.2020.124221
Photodegradation of perfluorooctanesulfonic acid on Fe-zeolites in water
Environ. Sci. Technol. 55 (1), 614 - 622 10.1021/acs.est.0c04558
Determination of elemental distribution and evaluation of elemental concentration in single Saccharomyces cerevisiae cells using single cell-inductively coupled plasma mass spectrometry
Metallomics 13 (6), mfab032 10.1093/mtomcs/mfab032
Electroactive microorganisms in mouse feces
Electrochim. Acta 365 , art. 137326 10.1016/j.electacta.2020.137326
Impact of the nitrifying community dynamics on the partial nitritation process performed by an AOB-enriched culture in a granular sludge airlift reactor
J. Environ. Chem. Eng. 9 (6), art. 106691 10.1016/j.jece.2021.106691
Redox potential heterogeneity in fixed bed electrodes leads to microbial stratification and inhomogeneous performance
ChemSusChem 14 (4), 1155 - 1165 10.1002/cssc.202002611
Evolutionary relationships of Ljungan virus variants circulating in multi-host systems across Europe
Viruses 13 (7), art. 1317 10.3390/v13071317
Microbes trading electricity in consortia of environmental and biotechnological significance
Curr. Opin. Biotechnol. 67 , 119 - 129 10.1016/j.copbio.2021.01.014
Conditioning film and early biofilm succession on plastic surfaces
Environ. Sci. Technol. 55 (16), 11006 - 11018 10.1021/acs.est.0c07875
What is specific in adsorption of perfluoroalkyl acids on carbon materials?
Chemosphere 273 , art. 128520 10.1016/j.chemosphere.2020.128520
Controlling adsorption of perfluoroalkyl acids on activated carbon felt by means of electrical potentials
Chem. Eng. J. 416 , art. 129070 10.1016/j.cej.2021.129070
Whole-cell biocatalysis using the Acidovorax sp. CHX100 Δ6HX for the production of ω-hydroxycarboxylic acids from cycloalkanes
New Biotech. 60 , 200 - 206 10.1016/j.nbt.2020.10.009
How comparable are microbial electrochemical systems around the globe? An electrochemical and microbiological cross‐laboratory study
ChemSusChem 14 (11), 2313 - 2330 10.1002/cssc.202100294
Cover profile: How comparable are microbial electrochemical systems around the globe? An electrochemical and microbiological cross‐laboratory study
ChemSusChem 14 (11), 2267 - 2267 10.1002/cssc.202100824
OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes
Life Sci. Alliance 4 (12), e202101167 10.26508/lsa.202101167
Mining synergistic microbial interactions: a roadmap on how to integrate multi-omics data
Microorganisms 9 (4), art. 840 10.3390/microorganisms9040840
The electrode potential determines the yield coefficients of early-stage Geobacter sulfurreducens biofilm anodes
Bioelectrochemistry 140 , art. 107752 10.1016/j.bioelechem.2021.107752
Perspectives of individual-worn sensors assessing personal environmental exposure
Engineering 7 (3), 285 - 289 10.1016/j.eng.2020.07.023
Antibacterial effect of a brominated self-etch adhesive on carious dentin - An in vivo study
J. Dent. 105 , art. 103555 10.1016/j.jdent.2020.103555
Bio-imaging with the helium-ion microscope: A review
Beilstein J. Nanotechnol. 12 , 1 - 23 10.3762/bjnano.12.1
New provisional function of OmpA from Acinetobacter sp. strain SA01 based on environmental challenges
mSystems 6 (1), e01175-20 10.1128/mSystems.01175-20
Comparative proteomics unravelled the hexachlorocyclohexane (HCH) isomers specific responses in an archetypical HCH degrading bacterium Sphingobium indicum B90A
Environ. Sci. Pollut. Res. 28 (30), 41380 - 41395 10.1007/s11356-021-13073-8
Removal of micropollutants and biological effects by conventional and intensified constructed wetlands treating municipal wastewater
Water Res. 201 , art. 117349 10.1016/j.watres.2021.117349
A curve-shift technique for the use of non-conservative organic tracers in constructed wetlands
Sci. Total Environ. 752 , art. 141818 10.1016/j.scitotenv.2020.141818
Electron inventory of the iron-sulfur scaffold complex HypCD essential in [NiFe]-hydrogenase cofactor assembly
Biochem. J. 478 (17), 3281 - 3295 10.1042/BCJ20210224
Evidence of heterogeneous degradation of PFOA by activated persulfate – FeS as adsorber and activator
Chem. Eng. J. 423 , art. 130102 10.1016/j.cej.2021.130102
Mass-transfer-limited biodegradation at low concentrations—Evidence from reactive transport modeling of isotope profiles in a bench-scale aquifer
Environ. Sci. Technol. 55 (11), 7386 - 7397 10.1021/acs.est.0c08566
Magnitude of diffusion- and transverse dispersion-induced isotope fractionation of organic compounds in aqueous systems
Environ. Sci. Technol. 55 (8), 4772 - 4782 10.1021/acs.est.0c06741
Complementary roles of wood-inhabiting fungi and bacteria facilitate deadwood decomposition
mSystems 6 (1), e01078-20 10.1128/mSystems.01078-20
Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
Sci. Data 8 , art. 198 10.1038/s41597-021-00987-8
Genome sequence, proteome profile, and identification of a multiprotein reductive dehalogenase complex in Dehalogenimonas alkenigignens strain BRE15M
J. Proteome Res. 20 (1), 613 - 623 10.1021/acs.jproteome.0c00569
Simultaneous removal of hydrocarbons and sulfate from groundwater using a “bioelectric well”
Electrochim. Acta 388 , art. 138636 10.1016/j.electacta.2021.138636
Cytoklepty in the plankton: A host strategy to optimize the bioenergetic machinery of endosymbiotic algae
Proc. Natl. Acad. Sci. U.S.A. 118 (27), e2025252118 10.1073/pnas.2025252118
Enzymatic degradation of polyethylene terephthalate nanoplastics analyzed in real time by isothermal titration calorimetry
Sci. Total Environ. 773 , art. 145111 10.1016/j.scitotenv.2021.145111
Phage strategies facilitate bacterial coexistence under environmental variability
PeerJ 9 , art. e12194 10.7717/peerj.12194
New developments in biological phosphorus accessibility and recovery approaches from soil and waste streams
Eng. Life Sci. 21 (3-4), 77 - 86 10.1002/elsc.202000076
A framework for P-cycle assessment in wastewater treatment plants
Sci. Total Environ. 760 , art. 143392 10.1016/j.scitotenv.2020.143392
Technologies and perspectives for achieving carbon neutrality
The Innovation 2 (4), art. 100180 10.1016/j.xinn.2021.100180
Microbial activity and metamitron degrading microbial communities differ between soil and water-sediment systems
J. Hazard. Mater. 408 , art. 124293 10.1016/j.jhazmat.2020.124293
Swarm Learning for decentralized and confidential clinical machine learning
Nature 594 (7862), 265 - 270 10.1038/s41586-021-03583-3
Extracellular and intracellular lanthanide accumulation in the methylotrophic Beijerinckiaceae bacterium RH AL1
Appl. Environ. Microb. 87 (13), e03144-20 10.1128/AEM.03144-20
Disentangling multiple chemical and non-chemical stressors in a lotic ecosystem using a longitudinal approach
Sci. Total Environ. 769 , art. 144324 10.1016/j.scitotenv.2020.144324
Figures of merit for photocatalysis: Comparison of NiO/La-NaTaO3 and Synechocystis sp. PCC 6803 as a semiconductor and a bio-photocatalyst for water splitting
Catalysts 11 (11), art. 1415 10.3390/catal11111415
Carbon, hydrogen and nitrogen stable isotope fractionation allow characterizing the reaction mechanisms of 1H-benzotriazole aqueous phototransformation
Water Res. 203 , art. 117519 10.1016/j.watres.2021.117519
Outer-sphere electron transfer does not underpin B12-dependent olefinic reductive dehalogenation in anaerobes
Phys. Chem. Chem. Phys. 23 (48), 27520 - 27524 10.1039/d1cp04632b
Identification of reductive dehalogenases that mediate complete debromination of penta- and tetrabrominated diphenyl ethers in Dehalococcoides spp.
Appl. Environ. Microb. 87 (17), e00602-21 10.1128/AEM.00602-21
Adsorption of polar and ionic organic compounds on activated carbon: Surface chemistry matters
Sci. Total Environ. 794 , art. 148508 10.1016/j.scitotenv.2021.1485082020 (152)
A new approach for repeated tip-sample relocation for AFM imaging of nano and micro sized particles and cells in liquid environment
Ultramicroscopy 211 , art. 112945 10.1016/j.ultramic.2020.112945
A survey of extended-spectrum beta-lactamase-producing Enterobacteriaceae in urban wetlands in southwestern Nigeria as a step towards generating prevalence maps of antimicrobial resistance
PLOS One 15 (3), e0229451 10.1371/journal.pone.0229451
Combined application of Bacillus sp. MN-54 and phosphorus improved growth and reduced lead uptake by maize in the lead-contaminated soil
Environ. Sci. Pollut. Res. 27 (35), 44528 - 44539 10.1007/s11356-020-10372-4
Enhanced remediation of Cr6+ in bacterial‐assisted floating wetlands
Water Environ. J. 34 (51), 970 - 978 10.1111/wej.12551
Enhanced growth of mungbean and remediation of petroleum hydrocarbons by Enterobacter sp. MN17 and biochar addition in diesel contaminated soil
Appl. Sci. 10 (23), art. 8548 10.3390/app10238548
A practical step towards sustainability: decentralised wastewater management in Oman
Desalin. Water Treat. 176 , 360 - 369 10.5004/dwt.2020.25545
Investigating community dynamics and performance during microbial electrochemical degradation of whey
ChemElectroChem 7 (4), 989 - 997 10.1002/celc.201902109
Warming the phycosphere: Differential effect of temperature on the use of diatom‐derived carbon by two copiotrophic bacterial taxa
Environ. Microbiol. 22 (4), 1381 - 1396 10.1111/1462-2920.14954
Novel multifunctional ion exchangers for metal ions removal in the presence of citric acid
Chemosphere 251 , art. 126331 10.1016/j.chemosphere.2020.126331
Coupling an electroactive Pseudomonas putida KT2440 with bioelectrochemical rhamnolipid production
Microorganisms 8 (12), art. 1959 10.3390/microorganisms8121959
Microbial degradation of hydrocarbons—basic principles for bioremediation: A review
Molecules 25 (4), art. 856 10.3390/molecules25040856
Evolutionary engineering of E. coli MG1655 for tolerance against isoprenol
Biotechnol. Biofuels 13 , art. 183 10.1186/s13068-020-01825-6
Increasing ibuprofen degradation in constructed wetlands by bioaugmentation with gravel containing biofilms of an ibuprofen-degrading Sphingobium yanoikuyae
Eng. Life Sci. 20 (5-6), 160 - 167 10.1002/elsc.201900097
The role of nickel traces in fine chemicals for hydrodechlorination reactions with zero-valent iron
Chem. Eng. J. 388 , art. 124185 10.1016/j.cej.2020.124185
Prospects for integrating disturbances, biodiversity and ecosystem functioning using microbial systems
Front. Ecol. Evol. 8 , art. 21 10.3389/fevo.2020.00021
A modular metagenomics pipeline allowing for the inclusion of prior knowledge using the example of anaerobic digestion
Microorganisms 8 (5), art. 669 10.3390/microorganisms8050669
Early‐stage sustainability assessment of biotechnological processes: A case study of citric acid production
Eng. Life Sci. 20 (3-4), 90 - 103 10.1002/elsc.201800198
Surface cleaning and sample carrier for complementary high-resolution imaging techniques
Biointerphases 15 (2), art. 021005 10.1116/1.5143203
Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19
Immunity 53 (6), 1296 - 1314 10.1016/j.immuni.2020.11.017
Environmental factors and host microbiomes shape host–pathogen dynamics
Trends Parasitol. 36 (7), 616 - 633 10.1016/j.pt.2020.04.010
Effect of temperature on acetate mineralization kinetics and microbial community composition in a hydrocarbon-affected microbial community during a shift from microoxic to sulfidogenic conditions
Front. Microbiol. 11 , art. 606565 10.3389/fmicb.2020.606565
Genetic cell-surface modification for optimized foam fractionation
Front. Bioeng. Biotechnol. 8 , art. 572892 10.3389/fbioe.2020.572892
Chemoassay profiling of benzoates and salicylates to assess their skin sensitization potential
Naunyn-Schmiedebergs Arch. Pharmacol. 393 (Suppl. 1), 85 - 85 10.1007/s00210-020-01828-y
Do wastewater pollutants impact oxygen transfer in aerated horizontal flow wetlands?
Chem. Eng. J. 383 , art. 123173 10.1016/j.cej.2019.123173
TerrestrialMetagenomeDB: a public repository of curated and standardized metadata for terrestrial metagenomes
Nucleic Acids Res. 48 (D1), D626 - D632 10.1093/nar/gkz994
Small but smart: On the diverse role of small proteins in the regulation of cyanobacterial metabolism
Life 10 (12), art. 322 10.3390/life10120322
Towards biorecycling: Isolation of a soil bacterium that grows on a polyurethane oligomer and monomer
Front. Microbiol. 11 , art. 404 10.3389/fmicb.2020.00404
Biotransformation of phthalate plasticizers and bisphenol A by marine-derived, freshwater, and terrestrial fungi
Front. Microbiol. 11 , art. 317 10.3389/fmicb.2020.00317
Keystone species and modularity in microbial hydrocarbon degradation uncovered by network analysis and association rule mining
Microorganisms 8 (2), art. 190 10.3390/microorganisms8020190
Effect of energy deprivation on metabolite release by anaerobic marine naphthalene‐degrading sulfate‐reducing bacteria
Environ. Microbiol. 22 (9), 4057 - 4066 10.1111/1462-2920.15195
The Great Oxidation Event expanded the genetic repertoire of arsenic metabolism and cycling
Proc. Natl. Acad. Sci. U.S.A. 117 (19), 10414 - 10421 10.1073/pnas.2001063117
Bacterial mock communities as standards for reproducible cytometric microbiome analysis
Nat. Protoc. 15 , 2788 - 2812 10.1038/s41596-020-0362-0
How to accurately assess surfactant biodegradation-impact of sorption on the validity of results
Appl. Microbiol. Biotechnol. 104 (1), 1 - 12 10.1007/s00253-019-10202-9
Groundwater protection under water scarcity; from regional risk assessment to local wastewater treatment solutions in Jordan
Sci. Total Environ. 706 , art. 136066 10.1016/j.scitotenv.2019.136066
In situ pilot application of nZVI embedded in activated carbon for remediation of chlorinated ethene‑contaminated groundwater: effect on microbial communities
Environ. Sci. Eur. 32 , art. 154 10.1186/s12302-020-00434-2
Effect of tannic acid combined with fluoride and lignosulfonic acid on anaerobic digestion in the agricultural waste management chain
Bioresour. Technol. 307 , art. 123171 10.1016/j.biortech.2020.123171
High resolution microscopy to evaluate the efficiency of surface sterilization of Zea Mays seeds
PLOS One 15 (11), e0242247 10.1371/journal.pone.0242247
Subcellular chemical imaging: New avenues in cell biology
Trends Cell Biol. 30 (3), 173 - 188 10.1016/j.tcb.2019.12.007
Identification and characterization of a bacterial core methionine synthase
Sci. Rep. 10 , art. 2100 10.1038/s41598-020-58873-z
Comparative genomics and proteomics in "Candidatus Kuenenia stuttgartiensis" reveal high genomic plasticity in the overall genome structure, CRISPR loci and surface proteins
BMC Genomics 21 , art. 851 10.1186/s12864-020-07242-1
16S rRNA gene-based primer pair showed high specificity and quantification accuracy in detecting freshwater Brocadiales anammox bacteria
FEMS Microbiol. Ecol. 96 (3), fiaa013 10.1093/femsec/fiaa013
Microfluidic single-cell analysis in biotechnology: from monitoring towards understanding
Curr. Opin. Biotechnol. 63 , 26 - 33 10.1016/j.copbio.2019.11.001
Phragmites australis in combination with hydrocarbons degrading bacteria is a suitable option for remediation of diesel-contaminated water in floating wetlands
Chemosphere 240 , art. 124890 10.1016/j.chemosphere.2019.124890
Anaerobic digestion of co-ensiled cover crop and barley straw: Effect of co-ensiling ratios, manure addition and impact on microbial community structure
Ind. Crop. Prod. 144 , art. 112025 10.1016/j.indcrop.2019.112025
Beyond sugar and ethanol production: Value generation opportunities through sugarcane residues
Front. Energy Res. 8 , art. 579577 10.3389/fenrg.2020.579577
Dual element (C/Cl) isotope analysis indicates distinct mechanisms of reductive dehalogenation of chlorinated ethenes and dichloroethane in Dehalococcoides mccartyi strain BTF08 with defined reductive dehalogenase inventories
Front. Microbiol. 11 , art. 1507 10.3389/fmicb.2020.01507
How to speed up the detection of aerobic microbial contaminations by using isothermal microcalorimetry
J. Therm. Anal. Calorim. 142 (5), 1933 - 1949 10.1007/s10973-020-09986-0
Rapid culture‐based detection of Legionella pneumophila using isothermal microcalorimetry with an improved evaluation method
Microb. Biotechnol. 13 (4), 1262 - 1272 10.1111/1751-7915.13563
Microbial electrosynthesis – An inventory on technology readiness level and performance of different process variants
Biotechnol. J. 15 (10), art. 2000066 10.1002/biot.202000066
In-situ treatment of herbicide-contaminated groundwater–Feasibility study for the cases atrazine and bromacil using two novel nanoremediation-type materials
J. Hazard. Mater. 393 , art. 122470 10.1016/j.jhazmat.2020.122470
Requirements for chromium reactors for use in the determination of H isotopes in compound-specific stable isotope analysis cf chlorinated compounds
Anal. Chem. 92 (3), 2383 - 2387 10.1021/acs.analchem.9b04737
Standard Gibbs energy of metabolic reactions: VI. Glyceraldehyde 3-phosphate dehydrogenase reaction
Fluid Phase Equilib. 517 , art. 112597 10.1016/j.fluid.2020.112597
Standard Gibbs energy of metabolic reactions: V. Enolase reaction
BBA-Proteins Proteomics 1868 (4), art. 140365 10.1016/j.bbapap.2020.140365
Blind spots in global soil biodiversity and ecosystem function research
Nat. Commun. 11 (1), art. 3870 10.1038/s41467-020-17688-2
Photosynthesis‐driven methane production in oxic lake water as an important contributor to methane emission
Limnol. Oceanogr. 65 (12), 2853 - 2865 10.1002/lno.11557
The influence of periphyton on the migration and transformation of arsenic in the paddy soil: Rules and mechanisms
Environ. Pollut. 263, Part B , art. 114624 10.1016/j.envpol.2020.114624
Monitoring stratification of anode biofilms in bioelectrochemical laminar flow reactors using flow cytometry
Environ. Sci. Ecotechnol. 4 , art. 10062 10.1016/j.ese.2020.100062
Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss
Microbiome 8 , art. 13 10.1186/s40168-020-0788-1
Coupled electrochemical and microbial catalysis for the production of polymer bricks
ChemSusChem 13 (19), 5295 - 5300 10.1002/cssc.202001272
The impact of glass material on growth and biocatalytic performance of mixed-species biofilms in capillary reactors for continuous cyclohexanol production
Front. Bioeng. Biotechnol. 8 , art. 588729 10.3389/fbioe.2020.588729
Taxonomic and functional diversity of the microbiome in a jet fuel contaminated site as revealed by combined application of in situ microcosms with metagenomic analysis
Sci. Total Environ. 708 , art. 135152 10.1016/j.scitotenv.2019.135152
Reductive debromination by sponge-associated anaerobic bacteria coupled to carbon isotope fractionation
Int. Biodeterior. Biodegrad. 155 , art. 105093 10.1016/j.ibiod.2020.105093
Isotope fractionation (2H/1H, 13C/12C, 37Cl/35Cl) in trichloromethane and trichloroethene caused by partitioning between gas phase and water
Environ. Sci.-Process Impacts 22 (3), 617 - 626 10.1039/c9em00583h
Attachment efficiency of nanomaterials to algae as an important criterion for ecotoxicity and grouping
Nanomaterials 10 (6), art. 1021 10.3390/nano10061021
Aquatische Makrophyten als Indikatoren für die Elementverteilung im Fließgewässer Mulde (Mitteldeutschland) – Aquatic macrophytes as indicators for element distribution in river water in the Mulde River (central Germany)
Hydrol. Wasserbewirtsch. 64 (3), 127 - 140 10.5675/HyWa_2020.3_2
Biorefinery perspectives of microbial electrolysis cells (MECs) for hydrogen and valuable chemicals production through wastewater treatment
Biofuel Res. J. 25 , 1128 - 1142 10.18331/BRJ2020.7.1.5
Diversity and coexistence are influenced by time-dependent species interactions in a predator-prey system
Ecol. Lett. 23 (6), 983 - 993 10.1111/ele.13500
Chlorine isotope fractionation of the major chloromethane degradation processes in the environment
Environ. Sci. Technol. 54 (3), 1634 - 1645 10.1021/acs.est.9b06139
A Sporolactobacillus-, Clostridium-, and Paenibacillus-dominant microbial consortium improved anaerobic RDX detoxification by starch addition
J. Microbiol. Biotechnol. 30 (6), 839 - 847 10.4014/jmb.1910.10034
Distinct nitrogen cycling and steep chemical gradients in Trichodesmium colonies
ISME J. 14 (2), 399 - 412 10.1038/s41396-019-0514-9
Label‐free four‐dimensional visualization of anaerobically growing electroactive biofilms
Cytom. Part A 97 (7), 737 - 741 10.1002/cyto.a.24169
Assessing the life-cycle sustainability of algae and bacteria-based wastewater treatment systems: High-rate algae pond and sequencing batch reactor
J. Environ. Manage. 264 , art. 110459 10.1016/j.jenvman.2020.110459
Physical, chemical and biological effects on soil bacterial dynamics in microscale models
Front. Ecol. Evol. 8 , art. 53 10.3389/fevo.2020.00053
Comment to the article “Hydroxyl radical scavenging by solid mineral surfaces in oxidative treatment systems: Rate constants and implications” published by K. Rusevova Crincoli and S. G. Huling in Water Research 169, 2020, 115240
Water Res. 186 , art. 116308 10.1016/j.watres.2020.116308
H/D-isotope fractionation due to aqueous phase diffusion – Deuterated hydrocarbons revisited
Chemosphere 258 , art. 127357 10.1016/j.chemosphere.2020.127357
Letter: What are the active species in the photocatalytic disinfection of water?
Chem 6 (4), 806 - 807 10.1016/j.chempr.2020.03.008
Interaction of zero-valent iron and carbonaceous materials for reduction of DDT
Chemosphere 253 , art. 126712 10.1016/j.chemosphere.2020.126712
Determining incremental coulombic efficiency and physiological parameters of early stage Geobacter spp. enrichment biofilms
PLOS One 15 (6), e0234077 10.1371/journal.pone.0234077
Cover profile: Availability of hydrogen shapes the microbial abundance in biofilm anodes based on Geobacter enrichment
ChemElectroChem 7 (18), 3683 - 3683 10.1002/celc.202001006
Availability of hydrogen shapes the microbial abundance in biofilm anodes based on Geobacter enrichment
ChemElectroChem 7 (18), 3720 - 3724 10.1002/celc.202000731
Following the community development of SIHUMIx – a new intestinal in vitro model for bioreactor use
Gut Microbes 11 (4), 1116 - 1129 10.1080/19490976.2019.1702431
The activation of mucosal-associated invariant T (MAIT) cells is affected by microbial diversity and riboflavin utilization in vitro
Front. Microbiol. 11 , art. 755 10.3389/fmicb.2020.00755
Economic process evaluation and environmental life-cycle assessment of bio-aromatics production
Front. Bioeng. Biotechnol. 8 , art. 403 10.3389/fbioe.2020.00403
Simultaneous compound-specific analysis of δ33S and δ34S in organic compounds by GC-MC-ICPMS using medium- and low-mass-resolution modes
Anal. Chem. 92 (21), 14685 - 14692 10.1021/acs.analchem.0c03253
Cytochrome c reductase is a key enzyme involved in the extracellular electron transfer pathway towards transition metal complexes in Pseudomonas putida
ChemSusChem 13 (19), 5308 - 5317 10.1002/cssc.202001645
Biotransformation of hexachlorocyclohexanes contaminated biomass for energetic utilization demonstrated in continuous anaerobic digestion system
J. Hazard. Mater. 384 , art. 121448 10.1016/j.jhazmat.2019.121448
Microbial necromass on the rise: The growing focus on its role in soil organic matter development
Soil Biol. Biochem. 150 , art. 108000 10.1016/j.soilbio.2020.108000
Competition between butyrate fermenters and chain-elongating bacteria limits the efficiency of medium-chain carboxylate production
Front. Microbiol. 11 , art. 336 10.3389/fmicb.2020.00336
Three novel Clostridia isolates produce n-caproate and iso-butyrate from lactate: comparative genomics of chain-elongating bacteria
Microorganisms 8 (12), art. 1970 10.3390/microorganisms8121970
Draft genome sequences of three Clostridia isolates involved in lactate-based chain elongation
Microbiol. Resour. Ann. 9 (32), e00679-20 10.1128/MRA.00679-20
Transcriptomic and proteomic responses of the organohalide-respiring bacterium Desulfoluna spongiiphila to growth with 2,6-dibromophenol as the electron acceptor
Appl. Environ. Microb. 86 (5), e02146-19 10.1128/AEM.02146-19
Compound-specific isotope analysis and enantiomer fractionation to characterize the transformation of hexachlorocyclohexane isomers in a soil–wheat pot system
Environ. Sci. Technol. 54 (14), 8690 - 8698 10.1021/acs.est.9b07609
Dual C–Cl isotope analysis for characterizing the anaerobic transformation of α, β, γ, and δ-hexachlorocyclohexane in contaminated aquifers
Water Res. 184 , art. 116128 10.1016/j.watres.2020.116128
Dual C–Cl isotope analysis for characterizing the reductive dechlorination of α- and γ-hexachlorocyclohexane by two Dehalococcoides mccartyi strains and an enrichment culture
Environ. Sci. Technol. 54 (12), 7250 - 7260 10.1021/acs.est.9b06407
Bacterial community diversity dynamics highlight degrees of nestedness and turnover patterns
Cytom. Part A 97 (7), 742 - 748 10.1002/cyto.a.23965
Microbial resource management for ex situ biomethanation of hydrogen at alkaline pH
Microorganisms 8 , art. 614 10.3390/microorganisms8040614
Metagenomics and stable isotope probing reveal the complementary contribution of fungal and bacterial communities in the recycling of dead biomass in forest soil
Soil Biol. Biochem. 148 , art. 107875 10.1016/j.soilbio.2020.107875
Fate of pendimethalin in soil and characterization of non-extractable residues (NER)
Sci. Total Environ. 753 , art. 141870 10.1016/j.scitotenv.2020.141870
The planned and the perceived city: A comparison of cyclists' and decision-makers' views on cycling quality
J. Transp. Geogr. 82 , art. 102602 10.1016/j.jtrangeo.2019.102602
Metagenome-assembled genome sequences of three uncultured Planktomarina sp. strains from the Northeast Atlantic Ocean
Microbiol. Resour. Ann. 9 (12), e00127-20 10.1128/MRA.00127-20
Manganese-oxidizing bacteria form multiple cylindrospermopsin transformation products with reduced human liver cell toxicity
Sci. Total Environ. 729 , art. 138924 10.1016/j.scitotenv.2020.138924
Adipose tissue derived bacteria are associated with inflammation in obesity and type 2 diabetes
Gut 69 (10), 1796 - 1806 10.1136/gutjnl-2019-320118
Response‐surface‐optimized and scaled‐up microbial electrosynthesis of chiral alcohols
ChemSusChem 13 (7), 1808 - 1816 10.1002/cssc.201903428
Mucosal-associated invariant T-Cell (MAIT) activation is altered by chlorpyrifos- and glyphosate-treated commensal gut bacteria
J. Immunotoxicol. 17 (1), 10 - 20 10.1080/1547691X.2019.1706672
Benzylsuccinate synthase is post-transcriptionally regulated in the toluene-degrading denitrifier Magnetospirillum sp. strain 15-1
Microorganisms 8 (5), art. 681 10.3390/microorganisms8050681
Directed reaction engineering boosts succinate formation of Synechocystis sp. PCC 6803_Δsll1625
Biotechnol. J. 15 (11), art. 2000127 10.1002/biot.202000127
Does glucose affect the de-esterification of methyl ferulate by Lactobacillus buchneri?
MicrobiologyOpen 9 (2), e971 10.1002/mbo3.971
Microorganisms and their activities within microbial communities
Cytom. Part A 97 (7), 681 - 682 10.1002/cyto.a.24175
Degradation of glyphosate in a Colombian soil is influenced by temperature, total organic carbon content and pH
Environ. Pollut. 259 , art. 113767 10.1016/j.envpol.2019.113767
Identification of benzene-degrading Proteobacteria in a constructed wetland by employing in situ microcosms and RNA-stable isotope probing
Appl. Microbiol. Biotechnol. 104 (4), 1809 - 1820 10.1007/s00253-019-10323-1
The molecular study of microbial and functional diversity of resistant microbes in heavy metal contaminated soil
Environ. Technol. Innov. 17 , art. 100606 10.1016/j.eti.2020.100606
Plant litter enhances degradation of the herbicide MCPA and increases formation of biogenic non-extractable residues in soil
Environ. Int. 142 , art. 105867 10.1016/j.envint.2020.105867
Biotechnological utilization of animal gut microbiota for valorization of lignocellulosic biomass
Appl. Microbiol. Biotechnol. 104 (2), 489 - 508 10.1007/s00253-019-10239-w
Metagenomic- and cultivation-based exploration of anaerobic chloroform biotransformation in hypersaline sediments as natural source of chloromethanes
Microorganisms 8 (5), art. 665 10.3390/microorganisms8050665
Transformation of chlorofluorocarbons investigated via stable carbon compound-specific isotope analysis
Environ. Sci. Technol. 54 (2), 870 - 878 10.1021/acs.est.9b05746
μBialSim: Constraint-based dynamic simulation of complex microbiomes
Front. Bioeng. Biotechnol. 8 , art. 574 10.3389/fbioe.2020.00574
Degradation of perfluorooctanoic acid adsorbed on Fe-zeolites with molecular oxygen as oxidant under UV-A irradiation
Appl. Catal. B-Environ. 278 , art. 119283 10.1016/j.apcatb.2020.119283
Near streambed flow shapes microbial guilds within and across trophic levels in fluvial biofilms
Limnol. Oceanogr. 65 (10), 2261 - 2277 10.1002/lno.11451
Correlia: an ImageJ plug‐in to co‐register and visualise multi‐modal correlative micrographs
J. Microsc. 280 (1), 3 - 11 10.1111/jmi.12928
New structural insights into bacterial sulfoacetaldehyde and taurine metabolism
Biochem. J. 477 (8), 1367 - 1371 10.1042/BCJ20200079
Actinobacterial degradation of 2-hydroxyisobutyric acid proceeds via acetone and formyl-CoA by employing a thiamine-dependent lyase reaction
Front. Microbiol. 11 , art. 691 10.3389/fmicb.2020.00691
In vitro elucidation of suppression effects of composts to soil-borne pathogen Phytophthora nicotianae on pepper plants using 16S amplicon sequencing and metaproteomics
Renew. Agr. Food Syst. 35 (2), 206 - 214 10.1017/S1742170518000467
IL4I1 is a metabolic immune checkpoint that activates the AHR and promotes tumor progression
Cell 182 (5), 1252 - 1270.e34 10.1016/j.cell.2020.07.038
Understanding the effect of carbon surface chemistry on adsorption of perfluorinated alkyl substances
Chem. Eng. J. 381 , art. 122689 10.1016/j.cej.2019.122689
Rational engineering of a multi-step biocatalytic cascade for the conversion of cyclohexane to polycaprolactone monomers in Pseudomonas taiwanensis
Biotechnol. J. 15 (11), art. 2000091 10.1002/biot.202000091
Maximizing biocatalytic cyclohexane hydroxylation by modulating cytochrome P450 monooxygenase expression in P. taiwanensis VLB120
Front. Bioeng. Biotechnol. 8 , art. 140 10.3389/fbioe.2020.00140
Environmentally relevant concentration of bisphenol S shows slight effects on SIHUMIx
Microorganisms 8 (9), art. 1436 10.3390/microorganisms8091436
In vitro and in vivo lipidomics as a tool for probiotics evaluation
Appl. Microbiol. Biotechnol. 104 (20), 8937 - 8948 10.1007/s00253-020-10864-w
Conversion efficiencies of a few living microbial cells detected at a high throughput by droplet-based ESI-MS
Anal. Chem. 92 (15), 10700 - 10708 10.1021/acs.analchem.0c01839
Effect of a bioactive cement on the microbial community in carious dentin after selective caries removal – An in-vivo study
J. Dent. 92 , art. 103264 10.1016/j.jdent.2019.103264
Severe COVID-19 is marked by a dysregulated myeloid cell compartment
Cell 182 (6), 1419 - 1440 10.1016/j.cell.2020.08.001
Effects of electrokinetic phenomena on bacterial deposition monitored by quartz crystal microbalance with dissipation monitoring
Environ. Sci. Technol. 54 (21), 14036 - 14045 10.1021/acs.est.0c04347
Electrokinetic effects on the interaction of phenanthrene with geo-sorbents
Chemosphere 242 , art. 125161 10.1016/j.chemosphere.2019.125161
Resilience of micropollutant and biological effect removal in an aerated horizontal flow treatment wetland
Water 12 (11), art. 3050 10.3390/w12113050
Reagent or catalyst? – FeS as activator for persulfate in water
Chem. Eng. J. 387 , art. 123804 10.1016/j.cej.2019.123804
Dynamics of hydrocarbon mineralization characterized by isotopic analysis at a jet-fuel-contaminated site in subtropical climate
J. Contam. Hydrol. 234 , art. 103684 10.1016/j.jconhyd.2020.103684
Regulatory systems for gene expression control in cyanobacteria
Appl. Microbiol. Biotechnol. 104 (5), 1977 - 1991 10.1007/s00253-019-10344-w
Complexation by cysteine and iron mineral adsorption limit cadmium mobility during metabolic activity of Geobacter sulfurreducens
Environ. Sci.-Process Impacts 22 (9), 1877 - 1887 10.1039/d0em00244e
Groundwater nitrification and denitrification are not always strictly aerobic and anaerobic processes, respectively: an assessment of dual-nitrate isotopic and chemical evidence in a stratified alluvial aquifer
Biogeochemistry 147 (2), 211 - 223 10.1007/s10533-020-00637-y
Defined microbial mixed culture for utilization of polyurethane monomers
ACS Sustain. Chem. Eng. 8 (47), 17466 - 17474 10.1021/acssuschemeng.0c06019
Influence of cytosolic conditions on the reaction equilibrium and the reaction enthalpy of the enolase reaction accessed by calorimetry and van ‘t HOFF
Biochim. Biophys. Acta-Gen. Subj. 1864 (10), art. 129675 10.1016/j.bbagen.2020.129675
Application of irreversible thermodynamics to determine the influence of cell mimicking conditions on the kinetics of equilibrium reactions of the glycolysis
Biophys. J. 118 (3, Suppl. 1), 346a - 347a 10.1016/j.bpj.2019.11.2000
Thermodynamics and kinetics of glycolytic reactions. Part I: Kinetic modeling based on irreversible thermodynamics and validation by calorimetry
Int. J. Mol. Sci. 21 (21), art. 8341 10.3390/ijms21218341
Thermodynamics and kinetics of glycolytic reactions. Part II: Influence of cytosolic conditions on thermodynamic state variables and kinetic parameters
Int. J. Mol. Sci. 21 (21), art. 7921 10.3390/ijms21217921
Immobilization of metribuzin degrading bacterial consortium MB3R on biochar enhances bioremediation of potato vegetated soil and restores bacterial community structure
J. Hazard. Mater. 390 , art. 121493 10.1016/j.jhazmat.2019.121493
Resilience trinity: safeguarding ecosystem functioning and services across three different time horizons and decision contexts
Oikos 129 (4), 445 - 456 10.1111/oik.07213
Highly efficient access to (S)-sulfoxides utilizing a promiscuous flavoprotein monooxygenase in a whole-cell biocatalyst format
ChemCatChem 12 (17), 4664 - 4671 10.1002/cctc.201901894
Quantifying the mineralization of 13C-labeled cations and anions reveals differences in microbial biodegradation of herbicidal ionic liquids between water and soil
ACS Sustain. Chem. Eng. 8 (8), 3412 - 3426 10.1021/acssuschemeng.9b07598
Hydrodechlorination of hexachlorobenzene in a miniaturized nano-Pd(0) reaction system combined with the simultaneous extraction of all dechlorination products
Appl. Catal. B-Environ. 275 , art. 119100 10.1016/j.apcatb.2020.119100
Molecular and engineering aspects of biocatalysis
Biotechnol. J. 15 (11), art. 2000499 10.1002/biot.202000499
Dehalococcoides-mediated B12-dependent reductive dehalogenation of aromatics does not proceed through outer-sphere electron transfer
Environ. Sci. Technol. 54 (24), 15751 - 15758 10.1021/acs.est.0c04404
Turnover of gram-negative bacterial biomass-derived carbon through the microbial food web of an agricultural soil
Soil Biol. Biochem. 152 , art. 108070 10.1016/j.soilbio.2020.1080702019 (136)
Floating treatment wetlands as a suitable option for large-scale wastewater treatment
Nat. Sustain. 2 (9), 863 - 871 10.1038/s41893-019-0350-y
Anaerobic degradation of 2,4,5-trichlorophenoxyacetic acid by enrichment cultures from freshwater sediments
Environ. Sci. Pollut. Res. 26 (33), 34459 - 34467 10.1007/s11356-019-06584-y
RNA-Seq analysis of soft rush (Juncus effusus): transcriptome sequencing, de novo assembly, annotation, and polymorphism identification
BMC Genomics 20 , art. 489 10.1186/s12864-019-5886-8
Unveiling the efficiency of vermicompost derived from different biowastes on wheat (Triticum aestivum L.) plant growth and soil health
Agronomy-Basel 9 (12), art. 791 10.3390/agronomy9120791
Hydraulic study of a non-steady horizontal sub-surface flow constructed wetland during start-up
Sci. Total Environ. 646 , 880 - 892 10.1016/j.scitotenv.2018.07.324
Hydrogen production from crude glycerol in an alkaline microbial electrolysis cell
Int. J. Hydrog. Energy 44 (32), 17204 - 17213 10.1016/j.ijhydene.2019.03.193
Syngas-aided anaerobic fermentation for medium-chain carboxylate and alcohol production: the case for microbial communities
Appl. Microbiol. Biotechnol. 103 (21-22), 8689 - 8709 10.1007/s00253-019-10086-9
Identification of nanoparticles and their localization in algal biofilm by 3D-imaging secondary ion mass spectrometry
J. Anal. At. Spectrom. 34 (6), 1098 - 1108 10.1039/c8ja00439k
Determination of microbial maintenance in acetogenesis and methanogenesis by experimental and modeling techniques
Front. Microbiol. 10 , art. 166 10.3389/fmicb.2019.00166
Modeling the relationship of aeration, oxygen transfer and treatment performance in aerated horizontal flow treatment wetlands
Water Res. 157 , 321 - 334 10.1016/j.watres.2019.03.062
Modeling dynamics of organic carbon and nitrogen removal during aeration interruption in aerated horizontal flow treatment wetlands
Water Sci. Technol. 80 (3), 597 - 606 10.2166/wst.2019.304
Microbial community drivers of PK/NRP gene diversity in selected global soils
Microbiome 7 , art. 78 10.1186/s40168-019-0692-8
Organic matter resources fuelling food webs in a human-modified lowland river: importance of habitat and season
Hydrobiologia 841 (1), 121 - 131 10.1007/s10750-019-04011-4
Microbial turnover of glyphosate to biomass: utilization as nutrient source and formation of AMPA and biogenic NER in an OECD 308 test
Environ. Sci. Technol. 53 (10), 5838 - 5847 10.1021/acs.est.9b01259
The impact of species, respiration type, growth phase and genetic inventory on absolute metal content of intact bacterial cells
Metallomics 11 (5), 925 - 935 10.1039/C9MT00009G
Estimation of the water cycle related to shale gas production under high data uncertainties: Dutch perspective
J. Environ. Manage. 231 , 483 - 493 10.1016/j.jenvman.2018.10.066
Quantitation and comparison of phenotypic heterogeneity among single cells of monoclonal microbial populations
Front. Microbiol. 10 , art. 2814 10.3389/fmicb.2019.02814
Enrichment of anaerobic methanotrophs in biotrickling filters using different sulfur compounds as electron acceptor
Environ. Eng. Sci. 36 (4), 431 - 443 10.1089/ees.2018.0283
Anaerobic methane oxidation coupled to sulfate reduction in a biotrickling filter: Reactor performance and microbial community analysis
Chemosphere 236 , art. 124290 10.1016/j.chemosphere.2019.07.021
Anaerobic oxidation of ethane by archaea from a marine hydrocarbon seep
Nature 568 (7750), 108 - 111 10.1038/s41586-019-1063-0
Hybridization of sugar-carboxylate-syngas platforms for the production of bio-alcohols from lignocellulosic biomass (LCB) – A state-of-the-art review and recommendations
Energy Conv. Manag. 200 , art. 112111 10.1016/j.enconman.2019.112111
Bacteria and micro‐eukaryotes are differentially segregated in sympatric wastewater microhabitats
Environ. Microbiol. 21 (5), 1757 - 1770 10.1111/1462-2920.14548
Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)
Eur. J. Immunol. 49 (10), 1457 - 1973 10.1002/eji.201970107
Microbial fuel cell-based biosensors
Biosensors 9 (3), art. 92 10.3390/bios9030092
An essential thioredoxin-type protein of Trypanosoma brucei acts as redox-regulated mitochondrial chaperone
PLoS Pathog. 15 (9), e1008065 10.1371/journal.ppat.1008065
Cyt‐Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2018 Conference Workshops
Cytom. Part A 95 (6), 598 - 644 10.1002/cyto.a.23777
Cellular physiology controls photoautotrophic production of 1,2‐propanediol from pools of CO2 and glycogen
Biotechnol. Bioeng. 116 (4), 882 - 892 10.1002/bit.26883
Algal remodeling in a ubiquitous planktonic photosymbiosis
Curr. Biol. 29 (6), 968 - 978.e4 10.1016/j.cub.2019.01.073
iDS372, a phenotypically reconciled model for the metabolism of Streptococcus pneumoniae strain R6
Front. Microbiol. 10 , art. 1283 10.3389/fmicb.2019.01283
Cytometry score: 23 to 4
Cytom. Part A 95 (3), 259 - 260 10.1002/cyto.a.23713
Quantifying a biocatalytic product from a few living microbial cells using microfluidic cultivation coupled to FT-ICR-MS
Anal. Chem. 91 (11), 7012 - 7018 10.1021/acs.analchem.9b00978
Causes of variability in male vibratory signals and the role of female choice in Mantophasmatodea
Behav. Processes 166 , art. 103907 10.1016/j.beproc.2019.103907
Quantification of outer membrane vesicles: a potential tool to compare response in Pseudomonas putida KT2440 to stress caused by alkanols
Appl. Microbiol. Biotechnol. 103 (10), 4193 - 4201 10.1007/s00253-019-09812-0
Deiodination in the presence of Dehalococcoides mccartyi strain CBDB1: comparison of the native enzyme and co-factor vitamin B12
Environ. Sci. Pollut. Res. 26 (31), 32636 - 32644 10.1007/s11356-019-06505-z
Abiotic reductive deiodination of iodinated organic compounds and X-ray contrast media catalyzed by free corrinoids
Chemosphere 221 , 212 - 218 10.1016/j.chemosphere.2019.01.003
Long-term behavior of defined mixed cultures of Geobacter sulfurreducens and Shewanella oneidensis in bioelectrochemical systems
Front. Bioeng. Biotechnol. 7 , art. 60 10.3389/fbioe.2019.00060
Rapid calorimetric detection of bacterial contamination: Influence of the cultivation technique
Front. Microbiol. 10 , art. 2530 10.3389/fmicb.2019.02530
Cytosine N4-methylation via M.Ssp6803II is involved in the regulation of transcription, fine-tuning of DNA replication and DNA repair in the cyanobacterium Synechocystis sp. PCC 6803
Front. Microbiol. 10 , art. 1233 10.3389/fmicb.2019.01233
Mycelial effects on phage retention during transport in a microfluidic platform
Environ. Sci. Technol. 53 (20), 11755 - 11763 10.1021/acs.est.9b03502
Intramolecular isotopic evidence for bacterial oxidation of propane in subsurface natural gas reservoirs
Proc. Natl. Acad. Sci. U.S.A. 116 (14), 6653 - 6658 10.1073/pnas.1817784116
Electron balancing under different sink conditions reveals positive effects on photon efficiency and metabolic activity of Synechocystis sp. PCC 6803
Biotechnol. Biofuels 12 , art. 43 10.1186/s13068-019-1378-y
AgNPs change microbial community structures of wastewater
Front. Microbiol. 9 , art. 3211 10.3389/fmicb.2018.03211
Tapping renewables: a new dawn for organic electrosynthesis in aqueous reaction media
ChemElectroChem 6 (16), 4126 - 4133 10.1002/celc.201900456
Engineering electrochemical CO2 reduction to formate under bioprocess‐compatible conditions to bioreactor scale
ChemElectroChem 6 (14), 3731 - 3735 10.1002/celc.201900526
Combined use of ISCR and biostimulation techniques in incomplete processes of reductive dehalogenation of chlorinated solvents
Sci. Total Environ. 648 , 819 - 829 10.1016/j.scitotenv.2018.08.184
Temperature and stoichiometric dependence of phytoplankton traits
Ecology 100 (12), e02875 10.1002/ecy.2875
Adsorbent regeneration by non‐thermal plasma for elimination of odorous compounds from indoor air
Chem. Eng. Technol. 42 (5), 1144 - 1152 10.1002/ceat.201800317
Isotopic characterization (2H, 13C, 37Cl, 81Br) of abiotic degradation of methyl bromide and methyl chloride in water and implications for future studies
Environ. Sci. Technol. 53 (15), 8813 - 8822 10.1021/acs.est.9b02165
Stabilization and scale‐up of photosynthesis‐driven ω‐hydroxylation of nonanoic acid methyl ester by two‐liquid phase whole‐cell biocatalysis
Biotechnol. Bioeng. 116 (8), 1887 - 1900 10.1002/bit.27006
Mixed-species biofilms for high-cell-density application of Synechocystis sp. PCC 6803 in capillary reactors for continuous cyclohexane oxidation to cyclohexanol
Bioresour. Technol. 282 , 171 - 178 10.1016/j.biortech.2019.02.093
Light‐dependent and aeration‐independent gram‐scale hydroxylation of cyclohexane to cyclohexanol by CYP450 harboring Synechocystis sp. PCC 6803
Biotechnol. J. 14 (8), art. 1800724 10.1002/biot.201800724
Suitability of fecal sludge from composting toilets as feedstock for carbonization
Journal of Water, Sanitation and Hygiene for Development 9 (4), 616 - 626 10.2166/washdev.2019.047
Removal of hexadecane by hydroponic root mats in partnership with alkane-degrading bacteria: bacterial augmentation enhances system’s performance
Int. J. Environ. Sci. Technol. 16 (8), 4611 - 4620 10.1007/s13762-018-2165-1
Remediation of textile bleaching effluent by bacterial augmented horizontal flow and vertical flow constructed wetlands: A comparison at pilot scale
Sci. Total Environ. 685 , 370 - 379 10.1016/j.scitotenv.2019.05.414
Pre-treatment of filter cake for anaerobic digestion in sugarcane biorefineries: Assessment of batch versus semi-continuous experiments
Renew. Energy 143 , 1416 - 1426 10.1016/j.renene.2019.05.029
Evaluation of sequencing library preparation protocols for viral metagenomic analysis from pristine aquifer groundwaters
Viruses 11 (6), art. 484 10.3390/v11060484
Complete genome sequence of Pseudoalteromonas virus vB_PspP-H6/1 that infects Pseudoalteromonas sp. strain H6
Mar. Genom. 47 , art. 100667 10.1016/j.margen.2019.03.002
Can alkaline hydrolysis of γ-HCH serve as a model reaction to study its aerobic enzymatic dehydrochlorination by LinA?
Int. J. Mol. Sci. 20 (23), art. 5955 10.3390/ijms20235955
Genomic blueprints of sponge-prokaryote symbiosis are shared by low abundant and cultivatable Alphaproteobacteria
Sci. Rep. 9 , art. 1999 10.1038/s41598-019-38737-x
Salt-regulated accumulation of the compatible solutes sucrose and glucosylglycerol in cyanobacteria and its biotechnological potential
Front. Microbiol. 10 , art. 2139 10.3389/fmicb.2019.02139
Sated by a zero-calorie sweetener: Wastewater bacteria can feed on acesulfame
Front. Microbiol. 10 , art. 2606 10.3389/fmicb.2019.02606
Crystal structure of dihydro-heme d1 dehydrogenase NirN from Pseudomonas aeruginosa reveals amino acid residues essential for catalysis
J. Mol. Biol. 431 (17), 3246 - 3260 10.1016/j.jmb.2019.05.046
Biodiversity impact of green roofs and constructed wetlands as progressive eco‐technologies in urban areas
Sustainability 11 (20), art. 5846 10.3390/su11205846
Trophic networks improve the performance of microbial anodes treating wastewater
npj Biofilms Microbiomes 5 , art. 27 10.1038/s41522-019-0100-y
Sulfate deprivation triggers high methane production in a disturbed and rewetted coastal peatland
Biogeosciences 16 (9), 1937 - 1953 10.5194/bg-16-1937-2019
Disturbance size can be compensated for by spatial fragmentation in soil microbial ecosystems
Front. Ecol. Evol. 7 , art. 290 10.3389/fevo.2019.00290
Biofouling of membranes in microbial electrochemical technologies: Causes, characterization methods and mitigation strategies
Bioresour. Technol. 279 , 327 - 338 10.1016/j.biortech.2019.02.001
Comment on "Re-evaluation of the century-old Langmuir isotherm for modeling adsorption phenomena in solution", published by Azizian et al. [Chemical physics 513 (2018) 99–104]
Chem. Phys. 517 , 265 - 267 10.1016/j.chemphys.2018.10.007
Spotlight on the energy harvest of electroactive microorganisms: The impact of the applied anode potential
Front. Microbiol. 10 , art. 1352 10.3389/fmicb.2019.01352
Corrigendum: Spotlight on the energy harvest of electroactive microorganisms: The impact of the applied anode potential
Front. Microbiol. 10 , art. 2744 10.3389/fmicb.2019.02744
Key sub‑community dynamics of medium‑chain carboxylate production
Microb. Cell. Fact. 18 , art. 92 10.1186/s12934-019-1143-8
2H and 13C isotope fractionation analysis of organophosphorus compounds for characterizing transformation reactions in biogas slurry: Potential for anaerobic treatment of contaminated biomass
Water Res. 163 , art. 114882 10.1016/j.watres.2019.114882
Quantitative assessment of microbial necromass contribution to soil organic matter
Glob. Change Biol. 25 (11), 3578 - 3590 10.1111/gcb.14781
Mechanistic dichotomy in bacterial trichloroethene dechlorination revealed by carbon and chlorine isotope effects
Environ. Sci. Technol. 53 (8), 4245 - 4254 10.1021/acs.est.8b06643
Toward improved accuracy in chlorine isotope analysis: Synthesis routes for in-house standards and characterization via complementary mass spectrometry methods
Anal. Chem. 91 , 12290 - 12297 10.1021/acs.analchem.9b02463
Enantiomer and carbon isotope fractionation of α-hexachlorocyclohexane by Sphingobium indicum strain B90A and the corresponding enzymes
Environ. Sci. Technol. 53 (15), 8715 - 8724 10.1021/acs.est.9b01233
Neutral mechanisms and niche differentiation in steady-state insular microbial communities revealed by single cell analysis
Environ. Microbiol. 21 (1), 164 - 181 10.1111/1462-2920.14437
H2 kinetic isotope fractionation superimposed by equilibrium isotope fractionation during hydrogenase activity of D. vulgaris strain Miyazaki
Front. Microbiol. 10 , art. 1545 10.3389/fmicb.2019.01545
flowEMMi: an automated model-based clustering tool for microbial cytometric data
BMC Bioinformatics 20 , art. 643 10.1186/s12859-019-3152-3
Microbial community shifts in biogas reactors upon complete or partial ammonia inhibition
Appl. Microbiol. Biotechnol. 103 (1), 519 - 533 10.1007/s00253-018-9444-0
Photocalorespirometry (Photo-CR): A novel method for access to photosynthetic energy conversion efficiency
Sci. Rep. 9 , art. 9298 10.1038/s41598-019-45296-8
Secondary structure of DNA released from purified capsids of human parvovirus B19 under moderate denaturing conditions
J. Gen. Virol. 100 (5), 812 - 827 10.1099/jgv.0.001253
Resting Escherichia coli as chassis for microbial electrosynthesis: production of chiral alcohols
ChemSusChem 12 (8), 1631 - 1634 10.1002/cssc.201900413
Front cover: Resting Escherichia coli as chassis for microbial electrosynthesis: production of chiral alcohols (ChemSusChem 8/2019)
ChemSusChem 12 (8), 1478, 1482 10.1002/cssc.201900931
Comparative life cycle assessment of HTC concepts valorizing sewage sludge for energetic and agricultural use
Energies 12 (5), art. 786 10.3390/en12050786
Co-composting of the biogas residues and spent mushroom substrate: Physicochemical properties and maturity assessment
Bioresour. Technol. 276 , 281 - 287 10.1016/j.biortech.2018.12.097
Photoautotrophic production of succinate via the oxidative branch of the tricarboxylic acid cycle influences glycogen accumulation in Synechocystis sp. PCC 6803
Algal Res. 43 , art. 101645 10.1016/j.algal.2019.101645
Investigation of architecture development and phosphate distribution in Chlorella biofilm by complementary microscopy techniques
FEMS Microbiol. Ecol. 95 (4), fiz029 10.1093/femsec/fiz029
Effect of temperature, pH and total organic carbon variations on microbial turnover of 13C315N-glyphosate in agricultural soil
Sci. Total Environ. 658 , 697 - 707 10.1016/j.scitotenv.2018.12.195
Removal of pharmaceuticals and personal care products using constructed wetlands: effective plant-bacteria synergism may enhance degradation efficiency
Environ. Sci. Pollut. Res. 26 (21), 21109 - 21126 10.1007/s11356-019-05320-w
Vertical flow constructed wetlands for decentralized wastewater treatment in Jordan: Optimization of total nitrogen removal
Sci. Total Environ. 671 , 495 - 504 10.1016/j.scitotenv.2019.03.376
Side-by-side comparison of 15 pilot-scale conventional and intensified subsurface flow wetlands for treatment of domestic wastewater
Sci. Total Environ. 658 , 1500 - 1513 10.1016/j.scitotenv.2018.12.165
Bioprocess development for lantibiotic ruminococcin-A production in Escherichia coli and kinetic insights into LanM enzymes catalysis
Front. Microbiol. 10 , art. 2133 10.3389/fmicb.2019.02133
Identification of dominant sulfamethoxazole-degraders in pig farm-impacted soil by DNA and protein stable isotope probing
Environ. Int. 126 , 118 - 126 10.1016/j.envint.2019.02.001
Hybrid electrochemical and biological treatment of herbicidal ionic liquids comprising the MCPA anion
Ecotox. Environ. Safe. 181 , 172 - 179 10.1016/j.ecoenv.2019.05.084
Assessment of hexachlorcyclohexane biodegradation in contaminated soil by compound-specific stable isotope analysis
Environ. Pollut. 254 (Part A), art. 113008 10.1016/j.envpol.2019.113008
Comparison of different label-free imaging high-throughput biosensing systems for aptamer binding measurements using thrombin aptamers
Anal. Biochem. 583 , art. 113323 10.1016/j.ab.2019.05.012
Floating treatment wetlands as biological buoyant filters for wastewater reclamation
Int. J. Phytoremediat. 21 (13), 1273 - 1289 10.1080/15226514.2019.1633253
Summer comes to the Southern Ocean: how phytoplankton shape bacterioplankton communities far into the deep dark sea
Ecosphere 10 (3), e02641 10.1002/ecs2.2641
Biogas production from submerged macrophytes—a case study of regional biomass potentials in Germany
Energy Sustain. Soc. 9 , art. 21 10.1186/s13705-019-0204-5
Integrating electrochemistry into bioreactors: effect of the upgrade kit on mass transfer, mixing time and sterilizability
Front. Energy Res. 7 , art. 98 10.3389/fenrg.2019.00098
Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation
ISME J. 13 (4), 921 - 936 10.1038/s41396-018-0323-6
Phragmites australis — a helophytic grass — can establish successful partnership with phenol-degrading bacteria in a floating treatment wetland
Saudi J. Biol. Sci. 26 (6), 1179 - 1186 10.1016/j.sjbs.2018.01.014
The simplified human intestinal microbiota (SIHUMIx) shows high structural and functional resistance against changing transit times in in vitro bioreactors
Microorganisms 7 (12), art. 641 10.3390/microorganisms7120641
Microbe-driven chemical ecology: past, present and future
ISME J. 13 (11), 2656 - 2663 10.1038/s41396-019-0469-x
Draft genome sequence of Brevibacillus sp. Strain LEMMJ03, isolated from an Antarctic volcano
Microbiol. Resour. Ann. 8 (40), e00921-19 10.1128/mra.00921-19
Identification of Clostridium cochlearium as an electroactive microorganism from the mouse gut microbiome
Bioelectrochemistry 130 , art. 107334 10.1016/j.bioelechem.2019.107334
Drought modulates interactions between arbuscular mycorrhizal fungal diversity and barley genotype diversity
Sci. Rep. 9 , art. 9650 10.1038/s41598-019-45702-1
Potentialities of floating wetlands for the treatment of polluted water of river Ravi, Pakistan
Ecol. Eng. 133 , 167 - 176 10.1016/j.ecoleng.2019.04.022
Enhanced degradation of hydrocarbons by gamma ray induced mutant strain of Pseudomonas putida
Biotechnol. Lett. 41 (3), 391 - 399 10.1007/s10529-019-02644-y
On-site performance of floating treatment wetland macrocosms augmented with dye-degrading bacteria for the remediation of textile industry wastewater
J. Clean Prod. 217 , 541 - 548 10.1016/j.jclepro.2019.01.258
Individual stages of bacterial dichloromethane degradation mapped by stable carbon and chlorine isotope analysis
J. Environ. Sci. 78 , 147 - 160 10.1016/j.jes.2018.09.008
Biophotovoltaics: green power generation from sunlight and water
Front. Microbiol. 10 , art. 866 10.3389/fmicb.2019.00866
Thermal proteome profiling allows quantitative assessment of interactions between tetrachloroethene reductive dehalogenase and trichloroethene
J. Proteomics 192 , 10 - 17 10.1016/j.jprot.2018.05.018
Anaerobic C-H oxyfunctionalization: Coupling of nitrate reduction and quinoline hydroxylation in recombinant Pseudomonas putida
Biotechnol. J. 14 (8), art. 1800615 10.1002/biot.201800615
Changes in bacterial diversity and catabolic gene abundance during the removal of dimethylphenol isomers in laboratory scale constructed wetlands
Appl. Microbiol. Biotechnol. 103 (1), 505 - 517 10.1007/s00253-018-9479-2
Microbial electrosynthesis system with dual biocathode arrangement for simultaneous acetogenesis, solventogenesis and carbon chain elongation
Chem. Commun. 55 (30), 4351 - 4354 10.1039/c9cc00208a
Sulfidation of ZVI/AC composite leads to highly corrosion-resistant nanoremediation particles with extended life-time
Sci. Total Environ. 665 , 235 - 245 10.1016/j.scitotenv.2019.02.136
Acceleration of microiron-based dechlorination in water by contact with fibrous activated carbon
Sci. Total Environ. 660 , 1274 - 1282 10.1016/j.scitotenv.2019.01.070
Constitutively solvent-tolerant Pseudomonas taiwanensis VLB120ΔCΔttgV supports particularly high styrene epoxidation activities when grown under glucose excess conditions
Biotechnol. Bioeng. 116 (5), 1089 - 1101 10.1002/bit.26924
Optimizing the metribuzin degrading potential of a novel bacterial consortium based on Taguchi design of experiment
J. Hazard. Mater. 366 , 1 - 9 10.1016/j.jhazmat.2018.11.054
Environmental risk or benefit? Comprehensive risk assessment of groundwater treated with nano Fe0-based Carbo-Iron®
Sci. Total Environ. 677 , 156 - 166 10.1016/j.scitotenv.2019.04.360
Augmenting biogas process modeling by resolving intracellular metabolic activity
Front. Microbiol. 10 , art. 1095 10.3389/fmicb.2019.01095
Immune modulation to enhance bone healing—A new concept to induce bone using prostacyclin to locally modulate immunity
Front. Immunol. 10 , art. 713 10.3389/fimmu.2019.00713
Ecological functions of agricultural soil bacteria and microeukaryotes in chitin degradation: A case study
Front. Microbiol. 10 , art. 1293 10.3389/fmicb.2019.01293
Tracing organic carbon and microbial community structure in mineralogically different soils exposed to redox fluctuations
Biogeochemistry 143 (1), 31 - 54 10.1007/s10533-019-00548-7
Effect of bioaugmentation on long-term biodegradation of diesel/biodiesel blends in soil microcosms
Sci. Total Environ. 671 , 948 - 958 10.1016/j.scitotenv.2019.03.431
Associational effects in the microbial neighborhood
ISME J. 13 (9), 2143 - 2149 10.1038/s41396-019-0444-6
Isotope fractionation approach to characterize the reactive transport processes governing the fate of hexachlorocyclohexanes at a contaminated site in India
Environ. Int. 132 , art. 105036 10.1016/j.envint.2019.105036
A concept for studying the transformation reaction of Hexachlorocyclohexanes in food webs using multi-element compound-specific isotope analysis
Anal. Chim. Acta 1064 , 56 - 64 10.1016/j.aca.2019.03.030
Effect of reduced sulfur species on chemolithoautotrophic pyrite oxidation with nitrate
Geomicrobiol. J. 36 (1), 19 - 29 10.1080/01490451.2018.1489915
Structures of 2-Hydroxyisobutyric Acid-CoA ligase reveal determinants of substrate specificity and describe a multi-conformational catalytic cycle
J. Mol. Biol. 431 (15), 2747 - 2761 10.1016/j.jmb.2019.05.027
Helophyte mats (wetland roofs) with high evapotranspiration rates as a tool for decentralised rainwater management – process stability improved by simultaneous greywater treatment
Water Supply 19 (3), 808 - 814 10.2166/ws.2018.126
Wetland roofs as an attractive option for decentralized water management and air conditioning enhancement in growing cities—a review
Water 11 (9), art. 1845 10.3390/w11091845
Carbon and hydrogen isotopic fractionation during abiotic hydrolysis and aerobic biodegradation of phthalate esters
Sci. Total Environ. 660 , 559 - 566 10.1016/j.scitotenv.2019.01.003
Spatial separation of metabolic stages in a tube anaerobic baffled reactor: reactor performance and microbial community dynamics
Appl. Microbiol. Biotechnol. 103 (9), 3915 - 3929 10.1007/s00253-019-09767-2