Publication Details

Category Text Publication
Reference Category Journals
DOI 10.5194/gmd-17-881-2024
Licence creative commons licence
Title (Primary) P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
Author Golparvar, A.; Kästner, M.; Thullner, M.
Source Titel Geoscientific Model Development
Year 2024
Department AME; MEB
Volume 17
Issue 2
Page From 881
Page To 898
Language englisch
Topic T7 Bioeconomy
Data and Software links https://doi.org/10.5281/zenodo.6301317
Supplements https://doi.org/10.5194/gmd-17-881-2024-supplement
Abstract The porous microenvironment of soil offers various environmental functions which are governed by physical and reactive processes. Understanding reactive transport processes in porous media is essential for many natural systems (soils, aquifers, aquatic sediments or subsurface reservoirs) or technological processes (water treatment or ceramic and fuel cell technologies). In particular, in the vadose zone of the terrestrial subsurface the spatially and temporally varying saturation of the aqueous and the gas phase leads to systems that involve complex flow and transport processes as well as reactive transformations of chemical compounds in the porous material. To describe these interacting processes and their dynamics at the pore scale requires a well-suited modelling framework accounting for the proper description of all relevant processes at a high spatial resolution. Here we present P3D-BRNS as a new open-source modelling toolbox harnessing the core libraries of OpenFOAM and coupled externally to the Biogeochemical Reaction Network Simulator (BRNS). The native OpenFOAM volume-of-fluid solver is extended to have an improved representation of the fluid–fluid interface. The solvers are further developed to couple the reaction module which can be tailored for a specific reactive transport simulation. P3D-RBNS is benchmarked against three different flow and reactive transport processes: (1) fluid–fluid configuration in a capillary corner, (2) mass transfer across the fluid–fluid interface and (3) microbial growth with a high degree of accuracy. Our model allows for simulation of the spatio-temporal distribution of all biochemical species in the porous structure (obtained from μ-CT images), for conditions that are commonly found in the laboratory and environmental systems. With our coupled computational model, we provide a reliable and efficient tool for simulating multiphase, reactive transport in porous media.
Persistent UFZ Identifier https://www.ufz.de/index.php?en=20939&ufzPublicationIdentifier=28744
Golparvar, A., Kästner, M., Thullner, M. (2024):
P3D-BRNS v1.0.0: a three-dimensional, multiphase, multicomponent, pore-scale reactive transport modelling package for simulating biogeochemical processes in subsurface environments
Geosci. Model Dev. 17 (2), 881 - 898 10.5194/gmd-17-881-2024