Publications
(All publications as of 2010)
2023 (3)
- Álvarez-Barragán, J., Cravo-Laureau, C., Xiong, B., Wick, L.Y., Duran, R. (2023):
Marine fungi select and transport aerobic and anaerobic bacterial populations from polycyclic aromatic hydrocarbon-contaminated sediments
mBio
full text (doi) - Khan, N., Muge, E., Mulaa, F.J., Wamalwa, B., von Bergen, M., Jehmlich, N., Wick, L.Y. (2023):
Mycelial nutrient transfer promotes bacterial co-metabolic organochlorine pesticide degradation in nutrient-deprived environments
ISME J.
full text (doi) - Saraiva, J.P., Bartholomäus, A., Brizola Toscan, R., Baldrian, P., Nunes da Rocha, U. (2023):
Recovery of 197 Eukaryotic bins reveals major challenges for Eukaryote genome reconstruction from terrestrial metagenomes
Mol. Ecol. Resour.
full text (doi)
2022 (1)
- Bates, K.A., Friesen, J., Loyau, A., Butler, H., Vredenburg, V.T., Laufer, J., Chatzinotas, A., Schmeller, D.S. (2022):
Environmental and anthropogenic factors shape the skin bacterial communities of a semi-arid amphibian species
Microb. Ecol.
full text (doi)
Index:
2023 (20)2022 (82)
2021 (60)
2020 (59)
2019 (56)
2018 (64)
2017 (56)
2016 (52)
2015 (58)
2014 (51)
2013 (54)
2012 (38)
2011 (35)
2010 (50)
You could use our publication index for further requests.
2023 (20)
- Abdulkadir, N., Saraiva, J.P., Schattenberg, F., Toscan, R., Borim Corrêa, F., Harms, H., Müller, S., Nunes da Rocha, U. (2023):
Combining flow cytometry and metagenomics improves recovery of metagenome-assembled genomes in a cell culture from activated sludge
Microorganisms 11 (1), art. 175
full text (doi) - Baleeiro, F.C.F., Raab, J., Kleinsteuber, S., Neumann, A., Sträuber, H. (2023):
Mixotrophic chain elongation with syngas and lactate as electron donors
Microb. Biotechnol. 16 (2), 322 - 336
full text (doi) - Baleeiro, F.C.F., Varchmin, L., Kleinsteuber, S., Sträuber, H., Neumann, A. (2023):
Formate-induced CO tolerance and methanogenesis inhibition in fermentation of syngas and plant biomass for carboxylate production
Biotechnol. Biofuels Bioprod. 16 , art. 26
full text (doi) - Becker, D., Popp, D., Bonk, F., Kleinsteuber, S., Harms, H., Centler, F. (2023):
Metagenomic analysis of anaerobic microbial communities degrading short-chain fatty acids as sole carbon sources
Microorganisms 11 (2), art. 420
full text (doi) - Borer, B., Magnúsdóttir, S. (2023):
The media composition as a crucial element in high-throughput metabolic network reconstruction
Interface Focus 13 (2), art. 20220070
full text (doi) - Dai, S., Harnisch, F., Bin-Hudari, M.S., Keller, N.-S., Vogt, C., Korth, B. (2023):
Improving the performance of bioelectrochemical sulfate removal by applying flow mode
Microb. Biotechnol. 16 (3), 595 - 604
full text (doi) - Dzofou Ngoumelah, D., Harnisch, F., Sulheim, S., Heggeset, T.M.B., Aune, I.H., Wentzel, A., Kretzschmar, J. (2023):
A unified and simple medium for growing model methanogens
Front. Microbiol. 13 , art. 1046260
full text (doi) - Dzofou Ngoumelah, D., Kuchenbuch, A., Harnisch, F., Kretzschmar, J. (2023):
Combining Geobacter spp. dominated biofilms and anaerobic digestion effluents─The effect of effluent composition and electrode potential on biofilm activity and stability
Environ. Sci. Technol. 57 (6), 2584 - 2594
full text (doi) - Grosch Schroeder, B., İstanbullu, H.B., Schmidt, M., Logroño, W., Harms, H., Nikolausz, M. (2023):
Effect of alkaline and mechanical pretreatment of wheat straw on methanogenic enrichment cultures from Pachnoda marginata larva gut
Fermentation 9 (1), art. 60
full text (doi) - Haenelt, S., Wang, G., Kasmanas, J.C., Musat, F., Richnow, H.H., Nunes da Rocha, U., Müller, J.A., Musat, N. (2023):
The fate of sulfonamide resistance genes and anthropogenic pollution marker intI1 after discharge of wastewater into a pristine river stream
Front. Microbiol. 14 , art. 1058350
full text (doi) - Kang, B.R., Kim, J.J., Hong, J.-K., Schlosser, D., Lee, T.K. (2023):
Continuous operation of fungal wheel reactor based on solid-state fermentation for the removal of pharmaceutical and personal care products
J. Environ. Manage. 331 , art. 117316
full text (doi) - Lai, B., Krömer, J., Aulenta, F., Wu, H., Nikel, P.I. (2023):
Exploiting synergies between microbial electrochemical technologies and synthetic biology
Microb. Biotechnol. 16 (3), 485 - 488
full text (doi) - Magnúsdóttir, S., Saraiva, J.P., Bartholomäus, A., Soheili, M., Brizola Toscan, R., Zhang, J., Nunes da Rocha, U. (2023):
Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa
Front. Microbiol. 14 , art. 1037845
full text (doi) - Reuben, R.C., Langer, D., Eisenhauer, N., Jurburg, S.D. (2023):
Universal drivers of cheese microbiomes
iScience 26 (1), art. 105744
full text (doi) - Rosado, P.M., Cardoso, P.M., Rosado, J.G., Schultz, J., Nunes da Rocha, U., Keller-Costa, T., Peixoto, R.S. (2023):
Exploring the potential molecular mechanisms of interactions between a probiotic consortium and its coral host
mSystems 8 (1), e00921-22
full text (doi) - Straessner, R., Nikolausz, M., Silve, A., Nazarova, N., Wuestner, R., Papachristou, I., Akaberi, S., Leber, K., Mueller, G., Frey, W. (2023):
Holistic exploitation of pulsed electric field (PEF)-treated and lipid extracted microalgae Auxenochlorella protothecoides, utilizing anaerobic digestion (AD)
Algal Res. 69 , art. 102950
full text (doi) - Toepel, J., Karande, R., Klähn, S., Bühler, B. (2023):
Cyanobacteria as whole-cell factories: current status and future prospectives
Curr. Opin. Biotechnol. 80 , art. 102892
full text (doi) - Veen, J., Jang, H., Raubenheimer, D., van Pinxteren, B.O.C.M., Kandza, V., Meirmans, P.G., van Dam, N.M., Dunker, S., Hoffmann, P., Worrich, A., Janmaat, K.R.L. (2023):
Development of embodied capital: diet composition, foraging skills, and botanical knowledge of forager children in the Congo Basin
Front. Ecol. Evol. 11 , art. 935987
full text (doi) - Werner, K.A., Feyen, L., Hübner, T., Brüggemann, N., Prost, K., Grohmann, E. (2023):
Fate of horizontal-gene-transfer markers and beta-lactamase genes during thermophilic composting of human excreta
Microorganisms 11 (2), art. 308
full text (doi) - Wolthuis, J.C., Magnúsdóttir, S., Stigter, E., Tang, Y.F., Jans, J., Gilbert, M., van der Hee, B., Langhout, P., Gerrits, W., Kies, A., de Ridder, J., van Mil, S. (2023):
Multi-country metabolic signature discovery for chicken health classification
Metabolomics 19 (2), art. 9
full text (doi)
2022 (82)
- Abdollahi, M., Al Sbei, S., Rosenbaum, M.A., Harnisch, F. (2022):
The oxygen dilemma: The challenge of the anode reaction for microbial electrosynthesis from CO2
Front. Microbiol. 13 , art. 947550
full text (doi) - Abramov, S.M., He, J., Wimmer, D., Muehe, E.M., Helle, T., Thorwarth, H., Kappler, A. (2022):
Thiourea leaching of gold from processed municipal solid waste incineration residues
J. Mater. Cycles Waste Manag. 24 (6), 2243 - 2254
full text (doi) - Bachmann, M., Wensch-Dorendorf, M., Kuhnitzsch, C., Kleinsteuber, S., Popp, D., Thierbach, A., Martens, S.D., Steinhöfel, O., Zeyner, A. (2022):
Changes in composition and diversity of epiphytic microorganisms on field pea seeds, partial crop peas, and whole crop peas during maturation and ensiling with or without lactic acid bacteria inoculant
Microbiol. Spectr. 10 (4), e00953-22
full text (doi) - Baleeiro, F.C.F., Kleinsteuber, S., Sträuber, H. (2022):
Recirculation of H2, CO2, and ethylene improves carbon fixation and carboxylate yields in anaerobic fermentation
ACS Sustain. Chem. Eng. 10 (13), 4073 - 4081
full text (doi) - Bertê, R., Teixeira, G.M., de Oliveira, J.P., Nicoletto, M.L.A., da Silva, D.V., de Godoy, G.G., Sipoli Sanches, D., de Resende, J.T.V., de Padua Pereira, U., Nunes da Rocha, U., de Oliveira, A.G. (2022):
Genome mining reveals high biosynthetic potential of biocontrol agent Bacillus velezensis B.BV10
Genes 13 (11), art. 1984
full text (doi) - Blombach, B., Grünberger, A., Centler, F., Wierckx, N., Schmid, J. (2022):
Exploiting unconventional prokaryotic hosts for industrial biotechnology
Trends Biotechnol. 40 (4), 385 - 397
full text (doi) - Bonidia, R.P., Avila Santos, A.P., Almeida, B.L.S., Stadler, P.F., Nunes da Rocha, U., Sipoli Sanches, D., de Carvalho, A.C.P.L.F. (2022):
Information theory for biological sequence classification: A novel feature extraction technique based on Tsallis entropy
Entropy 24 (10), art. 1398
full text (doi) - Bonidia, R.P., Avila Santos, A.P., de Almeida, B.L.S., Stadler, P.F., Nunes da Rocha, U., Sanches, D.S., de Carvalho, A.C.P.L.F. (2022):
BioAutoML: automated feature engineering and metalearning to predict noncoding RNAs in bacteria
Brief. Bioinform. 23 (4), bbac218
full text (doi) - Bozan, M., Popp, D., Kallies, R., Nunes da Rocha, U., Klähn, S., Bühler, K. (2022):
Whole-genome sequence of the filamentous diazotrophic cyanobacterium Tolypothrix sp. PCC 7712 and its comparison with non-diazotrophic Tolypothrix sp. PCC 7601
Front. Microbiol. 13 , art. 1042437
full text (doi) - Braune, M., Yuan, B., Sträuber, H., Mcdowall, S.C., Nitzsche, R., Gröngröft, A. (2022):
Corrigendum: A downstream processing cascade for separation of caproic and caprylic acid from maize silage-based fermentation broth
Front. Bioeng. Biotechnol. 10 , art. 1049451
full text (doi) - Bruckmann, C., Müller, S., Höner zu Siederdissen, C. (2022):
Automatic, fast, hierarchical, and non-overlapping gating of flow cytometric data with flowEMMi v2
Comp. Struct. Biotechnol. J. 20 , 6473 - 6489
full text (doi) - Bruckmann, C., Stadler, P.F., Hellmuth, M. (2022):
From modular decomposition trees to rooted median graphs
Discrete Appl. Math. 310 , 1 - 9
full text (doi) - Chen, S.-C., Ji, J., Popp, D., Jaekel, U., Richnow, H.-H., Sievert, S.M., Musat, F. (2022):
Genome and proteome analyses show the gaseous alkane degrader Desulfosarcina sp. strainBuS5 as an extreme metabolic specialist
Environ. Microbiol. 24 (4), 1964 - 1976
full text (doi) - Dai, S., Korth, B., Schwab, L., Aulenta, F., Vogt, C., Harnisch, F. (2022):
Deciphering the fate of sulfate in one- and two-chamber bioelectrochemical systems
Electrochim. Acta 408 , art. 139942
full text (doi) - Duong, H.L., Paufler, S., Harms, H., Maskow, T., Schlosser, D. (2022):
Applicability and information value of biocalorimetry for the monitoring of fungal solid-state fermentation of lignocellulosic agricultural by-products
New Biotech. 66 , 97 - 106
full text (doi) - Duong, H.L., Paufler, S., Harms, H., Schlosser, D., Maskow, T. (2022):
Fungal lignocellulose utilization strategies from a bioenergetic perspective: Quantification of related functional traits using biocalorimetry
Microorganisms 10 (8), art. 1675
full text (doi) - Eziuzor, S.C., Borim Corrêa, F., Peng, S., Schultz, J., Kleinsteuber, S., Nunes da Rocha, U., Adrian, L., Vogt, C. (2022):
Structure and functional capacity of a benzene‐mineralizing, nitrate‐reducing microbial community
J. Appl. Microbiol. 132 (4), 2795 - 2811
full text (doi) - Gharasoo, M., Elsner, M., van Cappellen, P., Thullner, M. (2022):
Pore-scale heterogeneities improve the degradation of a self-inhibiting substrate: Insights from reactive transport modeling
Environ. Sci. Technol. 56 (18), 13008 - 13018
full text (doi) - Grosch Schroeder, B., Logroño, W., Nunes da Rocha, U., Harms, H., Nikolausz, M. (2022):
Enrichment of anaerobic microbial communities from midgut and hindgut of sun beetle larvae (Pachnoda marginata) on wheat straw: effect of inoculum preparation
Microorganisms 10 (4), art. 761
full text (doi) - Hallama, M., Pekrun, C., Mayer-Gruner, P., Uksa, M., Abdullaeva, Y., Pilz, S., Schloter, M., Lambers, H., Kandeler, E. (2022):
The role of microbes in the increase of organic phosphorus availability in the rhizosheath of cover crops
Plant Soil 476 (1-2), 353 - 373
full text (doi) - Hoffstadt, K., Krafft, S., Nikolausz, M., Kuperjans, I. (2022):
Power-to-methane – Design and optimization of two new bubble column reactors
Chem. Ing. Tech. 94 (9), 1323 - 1323
full text (doi) - Izadi, P., Harnisch, F. (2022):
Microbial | electrochemical CO2 reduction: To integrate or not to integrate?
Joule 6 (5), 935 - 940
full text (doi) - Izadi, P., Schröder, U. (2022):
What is the role of individual species within bidirectional electroactive microbial biofilms: A case study on Desulfarculus baarsii and Desulfurivibrio alkaliphilus
ChemElectroChem 9 (2), e202101116
full text (doi) - Jadeja, N.B., Worrich, A. (2022):
From gut to mud: dissemination of antimicrobial resistance between animal and agricultural niches
Environ. Microbiol. 24 (8), 3290 - 3306
full text (doi) - Jensen Pedersen, K., Haange, S.-B., Žížalová, K., Viehof, A., Clavel, T., Leniček, M., Engelmann, B., Wick, L.Y., Schaap, F.G., Jehmlich, N., Rolle-Kampczyk, U., von Bergen, M. (2022):
Eggerthella lenta DSM 2243 alleviates bile acid stress response in Clostridium ramosum and Anaerostipes caccae by transformation of bile acids
Microorganisms 10 (10), art. 2025
full text (doi) - Jurburg, S.D., Buscot, F., Chatzinotas, A., Chaudhari, N.M., Clark, A.T., Garbowski, M., Grenié, M., Hom, E.F.Y., Karakoç, C., Marr, S., Neumann, S., Tarkka, M., van Dam, N.M., Weinhold, A., Heintz-Buschart, A. (2022):
The community ecology perspective of omics data
Microbiome 10 , art. 225
full text (doi) - Jurburg, S.D., Eisenhauer, N., Buscot, F., Chatzinotas, A., Chaudhari, N.M., Heintz-Buschart, A., Kallies, R., Küsel, K., Litchman, E., Macdonald, C.A., Müller, S., Reuben, R.C., Nunes da Rocha, U., Panagiotou, G., Rillig, M.C., Singh, B.K. (2022):
Potential of microbiome-based solutions for agrifood systems
Nat. Food 3 (8), 557 - 560
full text (doi) - Kabiru Nata’ala, M., Avila Santos, A.P., Kasmanas, J.C., Bartholomäus, A., Saraiva, J.P., Silva, S.G., Keller-Costa, T., Costa, R., Gomes, N.C.M., de Carvalho, A.C.P.L.F., Stadler, P.F., Sipoli Sanches, D., Nunes da Rocha, U. (2022):
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Environ. Microbiome 17 , art. 57
full text (doi) - Kamjunke, N., Beckers, L.-M., Herzsprung, P., von Tümpling, W., Lechtenfeld, O., Tittel, J., Risse-Buhl, U., Rode, M., Wachholz, A., Kallies, R., Schulze, T., Krauss, M., Brack, W., Comero, S., Gawlik, B.M., Skejo, H., Tavazzi, S., Mariani, G., Borchardt, D., Weitere, M. (2022):
Lagrangian profiles of riverine autotrophy, organic matter transformation, and micropollutants at extreme drought
Sci. Total Environ. 828 , art. 154243
full text (doi) - Karagulyan, M., Goebel, M.-O., Diehl, D., Abu Quba, A.A., Kästner, M., Bachmann, J., Wick, L.Y., Schaumann, G.E., Miltner, A. (2022):
Water stress-driven changes in bacterial cell surface properties
Appl. Environ. Microb. 88 (21), e00732-22
full text (doi) - Keller-Costa, T., Kozma, L., Silva, S.G., Toscan, R., Gonçalves, J., Lago-Lestón, A., Kyrpides, N.C., Nunes da Rocha, U., Costa, R. (2022):
Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
Microbiome 10 , art. 151
full text (doi) - Khan, A.M., Gharasoo, M., Wick, L.Y., Thullner, M. (2022):
Phase-specific stable isotope fractionation effects during combined gas-liquid phase exchange and biodegradation
Environ. Pollut. 309 , art. 119737
full text (doi) - Khan, N., Brizola Toscan, R., Lunayo, A., Wamalwa, B., Muge, E., Mulaa, F.J., Kallies, R., Harms, H., Wick, L.Y., Nunes da Rocha, U. (2022):
Draft genome sequences of two Sphingobium species associated with hexachlorocyclohexane (HCH) degradation isolated from an HCH-contaminated soil
Microbiol. Resour. Announc. 11 (3), e00886-21
full text (doi) - Khurana, S., Heße, F., Hildebrandt, A., Thullner, M. (2022):
Predicting the impact of spatial heterogeneity on microbially mediated nutrient cycling in the subsurface
Biogeosciences 19 (3), 665 - 688
full text (doi) - Knecht, C.A., Krüger, M., Kellmann, S., Mäusezahl, I., Möder, M., Adelowo, O.O., Vollmers, J., Kaster, A.-K., Nivala, J., Müller, J.A. (2022):
Cellular stress affects the fate of microbial resistance to folate inhibitors in treatment wetlands
Sci. Total Environ. 845 , art. 157318
full text (doi) - Koók, L., Rosa, L.F.M., Harnisch, F., Žitka, J., Otmar, M., Nemestóthy, N., Bakonyi, P., Kretzschmar, J. (2022):
Functional stability of novel homogeneous and heterogeneous cation exchange membranes for abiotic and microbial electrochemical technologies
J. Membr. Sci. 658 , art. 120705
full text (doi) - Korth, B., Pous, N., Hönig, R., Haus, P., Borim Corrêa, F., Nunes da Rocha, U., Puig, S., Harnisch, F. (2022):
Electrochemical and microbial dissection of electrified biotrickling filters
Front. Microbiol. 13 , art. 869474
full text (doi) - Koskimäki, J.J., Pohjanen, J., Kvist, J., Fester, T., Härtig, C., Podolich, O., Fluch, S., Edesi, J., Häggman, H., Pirttilä, A.M. (2022):
The meristem-associated endosymbiont Methylorubrum extorquens DSM13060 reprograms development and stress responses of pine seedlings
Tree Physiol. 42 (2), 391 - 410
full text (doi) - Krause, J.L., Engelmann, B., Nunes da Rocha, U., Pierzchalski, A., Chang, H.D., Zenclussen, A.C., von Bergen, M., Rolle-Kampczyk, U., Herberth, G. (2022):
MAIT cell activation is reduced by direct and microbiota-mediated exposure to bisphenols
Environ. Int. 158 , art. 106985
full text (doi) - Kuchenbuch, A., Frank, R., Vazquez Ramos, J., Jahnke, H.-G., Harnisch, F. (2022):
Electrochemical microwell plate to study electroactive microorganisms in parallel and real-time
Front. Bioeng. Biotechnol. 10 , art. 821734
full text (doi) - Kuhn, T., Buffi, M., Bindschedler, S., Chain, P.S., Gonzalez, D., Stanley, C.E., Wick, L.Y., Junier, P., Li Richter, X.-Y. (2022):
Design and construction of 3D printed devices to investigate active and passive bacterial dispersal on hydrated surfaces
BMC Biol. 20 , art. 203
full text (doi) - Le, A.V., Muehe, E.M., Drabesch, S., Pacheco, J.L., Bayer, T., Joshi, P., Kappler, A., Mansor, M. (2022):
Environmental risk of arsenic mobilization from disposed sand filter materials
Environ. Sci. Technol. 56 (23), 16822 - 16830
full text (doi) - Li, S., Abdulkadir, N., Schattenberg, F., Nunes da Rocha, U., Grimm, V., Müller, S., Liu, Z. (2022):
Stabilizing microbial communities by looped mass transfer
Proc. Natl. Acad. Sci. U.S.A. 119 (17), e2117814119
full text (doi) - Li, S., Liu, Z., Süring, C., Müller, S., Zeng, P. (2022):
The impact of the antibiotic fosfomycin on wastewater communities measured by flow cytometry
Front. Microbiol. 12 , art. 737831
full text (doi) - Liu, B., Sträuber, H., Saraiva, J., Harms, H., Silva, S.G., Kasmanas, J.C., Kleinsteuber, S., Nunes da Rocha, U. (2022):
Machine learning-assisted identification of bioindicators predicts medium-chain carboxylate production performance of an anaerobic mixed culture
Microbiome 10 , art. 48
full text (doi) - Lo, H.-Y., Martínez-Lavanchy, P., Goris, T., Heider, J., Boll, M., Kaster, A.-K., Müller, J.A. (2022):
IncP-type plasmids carrying genes for antibiotic resistance or for aromatic compound degradation are prevalent in sequenced Aromatoleum and Thauera strains
Environ. Microbiol. 24 (12), 6411 - 6425
full text (doi) - Logroño, W., Kluge, P., Kleinsteuber, S., Harms, H., Nikolausz, M. (2022):
Effect of inoculum microbial diversity in ex situ biomethanation of hydrogen
Bioengineering-Basel 9 (11), art. 678
full text (doi) - Logroño, W., Nikolausz, M., Harms, H., Kleinsteuber, S. (2022):
Physiological effects of 2-bromoethanesulfonate on hydrogenotrophic pure and mixed cultures
Microorganisms 10 (2), art. 355
full text (doi) - López-Mondéjar, R., Tláskal, V., Nunes da Rocha, U., Baldrian, P. (2022):
Global distribution of carbohydrate utilization potential in the prokaryotic tree of life
mSystems 7 (6), e00829-22
full text (doi) - Mahecha, M.D., Bastos, A., Bohn, F.J., Eisenhauer, N., Feilhauer, H., Hartmann, H., Hickler, T., Kalesse-Los, H., Migliavacca, M., Otto, F.E.L., Peng, J., Quaas, J., Tegen, I., Weigelt, A., Wendisch, M., Wirth, C. (2022):
Biodiversity loss and climate extremes — study the feedbacks
Nature 612 (7938), 30 - 32
full text (doi) - Menezes Bergo, N., Torres-Ballesteros, A., Negrão Signori, C., Benites, M., Jovane, L., Murton, B.J., Nunes da Rocha, U., Pellizari, V.H. (2022):
Spatial patterns of microbial diversity in Fe-Mn deposits and associated sediments in the Atlantic and Pacific oceans
Sci. Total Environ. 837 , art. 155792
full text (doi) - Neubert, K., Hell, M., Chávez Morejón, M., Harnisch, F. (2022):
Hetero-coupling of bio-based medium chain carboxylic acids by Kolbe electrolysis enables high fuel yield and efficiency
ChemSusChem 15 (21), e202201426
full text (doi) - Oliveira Monteiro, L.M., Saraiva, J.P., Brizola Toscan, R., Stadler, P.F., Silva-Rocha, R., Nunes da Rocha, U. (2022):
PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning
Environ. Microbiome 17 , art. 7
full text (doi) - Pozdnyakova, N., Dubrovskaya, E., Schlosser, D., Kuznetsova, S., Sigida, E., Grinev, V., Golubev, S., Kryuchkova, E., Varese, G.C., Turkovskaya, O. (2022):
Widespread ability of ligninolytic fungi to degrade hazardous organic pollutants as the basis for the self-purification ability of natural ecosystems and for mycoremediation technologies
Appl. Sci. 12 (4), art. 2164
full text (doi) - Puiggené, Ò., Cárdenas Espinosa, M.J., Schlosser, D., Thies, S., Jehmlich, N., Kappelmeyer, U., Schreiber, S., Wibberg, D., Kalinowski, J., Harms, H., Heipieper, H.J., Eberlein, C. (2022):
Extracellular degradation of a polyurethane oligomer involving outer membrane vesicles and further insights on the degradation of 2,4-diaminotoluene in Pseudomonas capeferrum TDA1
Sci. Rep. 12 , art. 2666
full text (doi) - Qin, W., Stärk, H.-J., Müller, S., Reemtsma, T. (2022):
Exploring the extent of phosphorus and heavy metal uptake by single cells of Saccharomyces cerevisiae and their effects on intrinsic elements by SC-ICP-TOF-MS
Front. Microbiol. 13 , art. 870931
full text (doi) - Robazza, A., Welter, C., Kubisch, C., Baleeiro, F.C.F., Ochsenreither, K., Neumann, A. (2022):
Co-fermenting pyrolysis aqueous condensate and pyrolysis syngas with anaerobic microbial communities enables L-malate production in a secondary fermentative stage
Fermentation 8 (10), art. 512
full text (doi) - Scarabotti, F., Bühler, K., Schmidt, M., Harnisch, F. (2022):
Thickness and roughness of transparent gold-palladium anodes have no impact on growth kinetics and yield coefficients of early-stage Geobacter sulfurreducens biofilms
Bioelectrochemistry 144 , art. 108043
full text (doi) - Scarabotti, F., Kuchenbuch, A., Kallies, R., Bühler, K., Harnisch, F. (2022):
Towards real-time determination of yield coefficients of early-stage electroactive biofilms using optical microscopy
Front. Energy Res. 10 , art. 920266
full text (doi) - Scholz, S., Brack, W., Escher, B.I., Hackermüller, J., Liess, M., von Bergen, M., Wick, L.Y., Zenclussen, A.C., Altenburger, R. (2022):
The EU chemicals strategy for sustainability: an opportunity to develop new approaches for hazard and risk assessment
Arch. Toxicol. 96 (8), 2381 - 2386
full text (doi) - Schultz, J., Argentino, I.C.V., Kallies, R., Nunes da Rocha, U., Rosado, A.S. (2022):
Polyphasic analysis reveals potential petroleum hydrocarbon degradation and biosurfactant production by rare biosphere thermophilic bacteria from Deception Island, an active Antarctic volcano
Front. Microbiol. 13 , art. 885557
full text (doi) - Schwab, L., Popp, D., Nowack, G., Bombach, P., Vogt, C., Richnow, H.H. (2022):
Structural analysis of microbiomes from salt caverns used for underground gas storage
Int. J. Hydrog. Energy 47 (47), 20684 - 20694
full text (doi) - Schwarz, E., Khurana, S., Chakrawal, A., Chavez Rodriguez, L., Wirsching, J., Streck, T., Manzoni, S., Thullner, M., Pagel, H. (2022):
Spatial control of microbial pesticide degradation in soil: A model-based scenario analysis
Environ. Sci. Technol. 56 (20), 14427 - 14438
full text (doi) - Spake, R., Barajas-Barbosa, M.P., Blowes, S.A., Bowler, D.E., Callaghan, C.T., Garbowski, M., Jurburg, S.D., van Klink, R., Korell, L., Ladouceur, E., Rozzi, R., Viana, D.S., Xu, W.-B., Chase, J.M. (2022):
Detecting thresholds of ecological change in the anthropocene
Annu. Rev. Environ. Resour. 47 , 797 - 821
full text (doi) - Sturion Lorenzi, A., Bonatelli, M.L., Ahii Chia, M., Peressim, L., Quecine, M.C. (2022):
Opposite sides of Pantoea agglomerans and its associated commercial outlook
Microorganisms 10 (10), art. 2072
full text (doi) - Sun, F., Mellage, A., Wang, Z., Bakkour, R., Griebler, C., Thullner, M., Cirpka, O.A., Elsner, M. (2022):
Toward improved bioremediation strategies: Response of BAM-degradation activity to concentration and flow changes in an inoculated bench-scale sediment tank
Environ. Sci. Technol. 56 (7), 4050 - 4061
full text (doi) - Teetz, N., Holtmann, D., Harnisch, F., Stöckl, M. (2022):
Upgrading Kolbe electrolysis – Highly efficient production of green fuels and solvents by coupling biosynthesis and electrosynthesis
Angew. Chem.-Int. Edit. 61 (50), e202210596
full text (doi) - Tucci, M., Cruz Viggi, C., Crognale, S., Matturro, B., Rossetti, S., Capriotti, A.L., Cavaliere, C., Cerrato, A., Montone, C.M., Harnisch, F., Aulenta, F. (2022):
Insights into the syntrophic microbial electrochemical oxidation of toluene: a combined chemical, electrochemical, taxonomical, functional gene-based, and metaproteomic approach
Sci. Total Environ. 850 , art. 157919
full text (doi) - Tucci, M., Milani, A., Resitano, M., Cruz Viggi, C., Giampaoli, O., Miccheli, A., Crognale, S., Matturro, B., Rossetti, S., Harnisch, F., Aulenta, F. (2022):
Syntrophy drives the microbial electrochemical oxidation of toluene in a continuous-flow “bioelectric well”
J. Environ. Chem. Eng. 10 (3), art. 107799
full text (doi) - Undiandeye, J., Gallegos, D., Sträuber, H., Nelles, M., Stinner, W. (2022):
Ensiling parameters in vertical columns and multiple kinetic models evaluation of biomethane potential of ensiled sugar beet leaves
Biofuels-UK 13 (8), 995 - 1005
full text (doi) - Vasileiadis, S., Perruchon, C., Scheer, B., Adrian, L., Steinbach, N., Trevisan, M., Plaza-Bolaños, P., Agüera, A., Chatzinotas, A., Karpouzas, D.G. (2022):
Nutritional inter-dependencies and a carbazole-dioxygenase are key elements of a bacterial consortium relying on a Sphingomonas for the degradation of the fungicide thiabendazole
Environ. Microbiol. 24 (11), 5105 - 5122
full text (doi) - Werner, K.A., Poehlein, A., Schneider, D., El-Said, K., Wöhrmann, M., Linkert, I., Hübner, T., Brüggemann, N., Prost, K., Daniel, R., Grohmann, E. (2022):
Thermophilic composting of human feces: Development of bacterial community composition and antimicrobial resistance gene pool
Front. Microbiol. 13 , art. 824834
full text (doi) - Werner, K.A., Schneider, D., Poehlein, A., Diederich, N., Feyen, L., Axtmann, K., Hübner, T., Brüggemann, N., Prost, K., Daniel, R., Grohmann, E. (2022):
Metagenomic insights into the changes of antibiotic resistance and pathogenicity factor pools upon thermophilic composting of human excreta
Front. Microbiol. 13 , art. 826071
full text (doi) - Xiong, B.-J., Kleinsteuber, S., Sträuber, H., Dusny, C., Harms, H., Wick, L.Y. (2022):
Impact of fungal hyphae on growth and dispersal of obligate anaerobic bacteria in aerated habitats
mBio 13 (3), e00769-22
full text (doi) - Xiong, B.-J., Stanley, C.E., Dusny, C., Schlosser, D., Harms, H., Wick, L.Y. (2022):
pH distribution along growing fungal hyphae at microscale
J. Fungi 8 (6), art. 599
full text (doi) - You, X., Kallies, R., Hild, K., Hildebrandt, A., Harms, H., Chatzinotas, A., Wick, L.Y. (2022):
Transport of marine tracer phage particles in soil
Sci. Total Environ. 814 , art. 152704
full text (doi) - You, X., Kallies, R., Kühn, I., Schmidt, M., Harms, H., Chatzinotas, A., Wick, L.Y. (2022):
Phage co-transport with hyphal-riding bacteria fuels bacterial invasion in a water-unsaturated microbial model system
ISME J. 16 (5), 1275 - 1283
full text (doi) - You, X., Klose, N., Kallies, R., Harms, H., Chatzinotas, A., Wick, L.Y. (2022):
Mycelia-assisted isolation of non-host bacteria able to co-transport phages
Viruses 14 (2), art. 195
full text (doi) - Zahn, M., König, G., Pham, H.V.C., Seroka, B., Lazny, R., Yang, G., Ouerfelli, O., Lotowski, Z., Rohwerder, T. (2022):
Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA
J. Biol. Chem. 298 (1), art. 101522
full text (doi) - Zhang, X., Barceló, D., Clougherty, R.J., Gao, B., Harms, H., Tefsen, B., Vithanage, M., Wang, H., Wang, Z., Wells, M. (2022):
“Potentially toxic element”─Something that means everything means nothing
Environ. Sci. Technol. 56 (17), 11922 - 11925
full text (doi) - Zhou, J., Saeidi, N., Wick, L.Y., Xie, Y., Kopinke, F.-D., Georgi, A. (2022):
Efficient removal of trifluoroacetic acid from water using surface-modified activated carbon and electro-assisted desorption
J. Hazard. Mater. 436 , art. 129051
full text (doi) - Zhou, L.-J., Wang, Y.-Y., Li, S.-L., Cao, L., Jiang, F.-L., Maskow, T., Liu, Y. (2022):
Core–shell polydopamine/Cu nanometer rods efficiently deactivate microbes by mimicking chloride-activated peroxidases
ACS Omega 7 (34), 29984 - 29994
full text (doi)
2021 (60)
- Álvarez-Barragán, J., Cravo-Laureau, C., Wick, L.Y., Duran, R. (2021):
Fungi in PAH-contaminated marine sediments: Cultivable diversity and tolerance capacity towards PAH
Mar. Pollut. Bull. 164 , art. 112082
full text (doi) - Baleeiro, F.C.F., Ardila, M.S., Kleinsteuber, S., Sträuber, H. (2021):
Effect of oxygen contamination on propionate and caproate formation in anaerobic fermentation
Front. Bioeng. Biotechnol. 9 , art. 725443
full text (doi) - Baleeiro, F.C.F., Kleinsteuber, S., Sträuber, H. (2021):
Hydrogen as a co-electron donor for chain elongation with complex communities
Front. Bioeng. Biotechnol. 9 , art. 650631
full text (doi) - Braune, M., Yuan, B., Sträuber, H., Mcdowall, S.C., Nitzsche, R., Gröngröft, A. (2021):
A downstream processing cascade for separation of caproic and caprylic acid from maize silage-based fermentation broth
Front. Bioeng. Biotechnol. 9 , art. 725578
full text (doi) - Calabrese, F., Stryhanyuk, H., Moraru, C., Schlömann, M., Wick, L.Y., Richnow, H.H., Musat, F., Musat, N. (2021):
Metabolic history and metabolic fitness as drivers of anabolic heterogeneity in isogenic microbial populations
Environ. Microbiol. 23 (11), 6764 - 6776
full text (doi) - Ceballos-Escalera, A., Pous, N., Chiluiza-Ramos, P., Korth, B., Harnisch, F., Bañeras, L., Balaguer, M.D., Puig, S. (2021):
Electro-bioremediation of nitrate and arsenite polluted groundwater
Water Res. 190 , art. 116748
full text (doi) - Clark, A.T., Arnoldi, J.-F., Zelnik, Y.R., Barabas, G., Hodapp, D., Karakoç, C., König, S., Radchuk, V., Donohue, I., Huth, A., Jacquet, C., de Mazancourt, C., Mentges, A., Nothaaß, D., Shoemaker, L.G., Taubert, F., Wiegand, T., Wang, S., Chase, J.M., Loreau, M., Harpole, S. (2021):
General statistical scaling laws for stability in ecological systems
Ecol. Lett. 24 (7), 1474 - 1486
full text (doi) - Cohen, Y., Pasternak, Z., Müller, S., Hübschmann, T., Schattenberg, F., Sivakala, K.K., Abed-Rabbo, A., Chatzinotas, A., Jurkevitch, E. (2021):
Community and single cell analyses reveal complex predatory interactions between bacteria in high diversity systems
Nat. Commun. 12 , art. 5481
full text (doi) - da Rosa Braun, P.H., Canuto de Almeida e Silva, T., Rodrigo Quejigo, J., Kuchenbuch, A., Rezwan, K., Harnisch, F., Wilhelm, M. (2021):
Impact of surface properties of porous SiOC‐based materials on the performance of Geobacter biofilm anodes
ChemElectroChem 8 (5), 850 - 857
full text (doi) - Dalby, F.R., Nikolausz, M., Hansen, M.J., Feilberg, A. (2021):
Effects of combined tannic acid/fluoride on sulfur transformations and methanogenic pathways in swine manure
PLOS One 16 (9), art. e0257759
full text (doi) - Dumke, R., de la Cruz Barron, M., Oertel, R., Helm, B., Kallies, R., Berendonk, T.U., Dalpke, A. (2021):
Evaluation of two methods to concentrate SARS-CoV-2 from untreated wastewater
Pathogens 10 (2), art. 195
full text (doi) - Dzofou Ngoumelah, D., Harnisch, F., Kretzschmar, J. (2021):
Benefits of age–Improved resistance of mature electroactive biofilm anodes in anaerobic digestion
Environ. Sci. Technol. 55 (12), 8258 - 8266
full text (doi) - Fricke, C., Klee, T., Richter, S., Paufler, S., Harms, H., Maskow, T. (2021):
Numerical heat flow and transport simulation as a development tool for the design of isothermal microcalorimeters
Thermochim. Acta 706 , art. 179070
full text (doi) - Golparvar, A., Kästner, M., Thullner, M. (2021):
Pore-scale modeling of microbial activity: What we have and what we need
Vadose Zone J. 20 (1), e20087
full text (doi) - González-González, S., Astorga-Eló, M., Campos, M., Wick, L.Y., Acuña, J.J., Jorquera, M.A. (2021):
Compost fungi allow for effective dispersal of putative PGP bacteria
Agronomy-Basel 11 (8), art. 1567
full text (doi) - Greinert, T., Vogel, K., Maskow, T., Held, C. (2021):
New thermodynamic activity-based approach allows predicting the feasibility of glycolysis
Sci. Rep. 11 , art. 6125
full text (doi) - Guerra, C.A., Bardgett, R.D., Caon, L., Crowther, T.W., Delgado-Baquerizo, M., Montanarella, L., Navarro, L.M., Orgiazzi, A., Singh, B.K., Tedersoo, L., Vargas-Rojas, R., Briones, M.J.I., Buscot, F., Cameron, E.K., Cesarz, S., Chatzinotas, A., Cowan, D.A., Djukic, I., van der Hoogen, J., Lehmann, A., Maestre, F.T., Marín, C., Reitz, T., Rillig, M.C., Smith, L.C., de Vries, F.T., Weigelt, A., Wall, D.H., Eisenhauer, N. (2021):
Tracking, targeting, and conserving soil biodiversity - A monitoring and indicator system can inform policy
Science 371 (6526), 239 - 241
full text (doi) - Harnisch, F., Chávez Morejón, M. (2021):
Hydrogen from water is more than a fuel: Hydrogenations and hydrodeoxygenations for a biobased economy
Chem. Rec. 21 (9), 2277 - 2289
full text (doi) - Harnisch, F., Korth, B. (2021):
First settlers persist
Joule 5 (6), 1316 - 1319
full text (doi) - Heeger, F., Bourne, E.C., Wurzbacher, C., Funke, E., Lipzen, A., He, G., Ng, V., Grigoriev, I.V., Schlosser, D., Monaghan, M.T. (2021):
Evidence for lignocellulose-decomposing enzymes in the genome and transcriptome of the aquatic hyphomycete Clavariopsis aquatica
J. Fungi 7 (10), art. 854
full text (doi) - Heyse, J., Schattenberg, F., Rubbens, P., Müller, S., Waegeman, W., Boon, N., Props, R. (2021):
Predicting the presence and abundance of bacterial taxa in environmental communities through flow cytometric fingerprinting
mSystems 6 (5), e00551-21
full text (doi) - Hofmann, P., Clark, A., Hoffmann, P., Chatzinotas, A., Harpole, W.S., Dunker, S. (2021):
Beyond nitrogen: phosphorus - estimating the minimum niche dimensionality for resource competition between phytoplankton
Ecol. Lett. 24 (4), 761 - 771
full text (doi) - Kasmanas, J.C., Bartholomäus, A., Borim Corrêa, F., Tal, T., Jehmlich, N., Herberth, G., von Bergen, M., Stadler, P.F., de Carvalho, A.C.P.L.F., Nunes da Rocha, U. (2021):
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
Nucleic Acids Res. 49 (D1), D743 - D750
full text (doi) - Keller, N.-S., Hornbruch, G., Lüders, K., Werban, U., Vogt, C., Kallies, R., Dahmke, A., Richnow, H.H. (2021):
Monitoring of the effects of a temporally limited heat stress on microbial communities in a shallow aquifer
Sci. Total Environ. 781 , art. 146377
full text (doi) - Keller-Costa, T., Lago-Lestón, A., Saraiva, J.P., Toscan, R., Silva, S.G., Gonçalves, J., Cox, C.J., Kyrpides, N., Nunes da Rocha, U., Costa, R. (2021):
Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
Microbiome 9 , art. 72
full text (doi) - Khan, N., Brizola Toscan, R., Lunayo, A., Wamalwa, B., Muge, E., Mulaa, F.J., Kallies, R., Harms, H., Wick, L.Y., Nunes da Rocha, U. (2021):
Draft genome sequence of Fusarium equiseti K3, a fungal species isolated from hexachlorocyclohexane-contaminated soil
Microbiol. Resour. Announc. 10 (47), e00885-21
full text (doi) - Korth, B., Heber, C., Normant-Saremba, M., Maskow, T., Harnisch, F. (2021):
Precious data from tiny samples: Revealing the correlation between energy content and the chemical oxygen demand of municipal wastewater using micro-bomb combustion calorimetry
Front. Energy Res. 9 , art. 705800
full text (doi) - Kretzschmar, J., Harnisch, F. (2021):
Electrochemical impedance spectroscopy on biofilm electrodes – conclusive or euphonious?
Curr. Opin. Electrochem. 29 , art. 100757
full text (doi) - Li, D., Zhang, H., Xiang, H., Rasul, S., Fontmorin, J.-M., Izadi, P., Roldan, A., Taylor, R., Feng, Y., Banerji, L., Cowan, A., Yu, E.H., Xuan, J. (2021):
How to go beyond C1 products with electrochemical reduction of CO2
Sustain. Energ. Fuels 5 (23), 5893 - 5914
full text (doi) - Liess, M., Liebmann, L., Vormeier, P., Weisner, O., Altenburger, R., Borchardt, D., Brack, W., Chatzinotas, A., Escher, B., Foit, K., Gunold, R., Henz, S., Hitzfeld, K.L., Schmitt-Jansen, M., Kamjunke, N., Kaske, O., Knillmann, S., Krauss, M., Küster, E., Link, M., Lück, M., Möder, M., Müller, A., Paschke, A., Schäfer, R.B., Schneeweiss, A., Schreiner, V.C., Schulze, T., Schüürmann, G., von Tümpling, W., Weitere, M., Wogram, J., Reemtsma, T. (2021):
Pesticides are the dominant stressors for vulnerable insects in lowland streams
Water Res. 201 , art. 117262
full text (doi) - Logroño, W., Popp, D., Nikolausz, M., Kluge, P., Harms, H., Kleinsteuber, S. (2021):
Microbial communities in flexible biomethanation of hydrogen are functionally resilient upon starvation
Front. Microbiol. 12 , art. 619632
full text (doi) - Melkonian, C., Fillinger, L., Atashgahi, S., Nunes da Rocha, U., Kuiper, E., Olivier, B., Braster, M., Gottstein, W., Helmus, R., Parsons, J.R., Smidt, H., van der Waals, M., Gerritse, J., Brandt, B.W., Röling, W.F.M., Molenaar, D., van Spanning, R.J.M. (2021):
High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumers
Commun. Biol. 4 , art. 530
full text (doi) - Metze, D., Popp, D., Schwab, L., Keller, N.-S., Nunes da Rocha, U., Richnow, H.-H., Vogt, C. (2021):
Temperature management potentially affects carbon mineralization capacity and microbial community composition of a shallow aquifer
FEMS Microbiol. Ecol. 97 (2), fiaa261
full text (doi) - Müller, C., Knöller, K., Lucas, R., Kleinsteuber, S., Trabitzsch, R., Weiß, H., Stollberg, R., Richnow, H.H., Vogt, C. (2021):
Benzene degradation in contaminated aquifers: Enhancing natural attenuation by injecting nitrate
J. Contam. Hydrol. 238 , art. 103759
full text (doi) - Neubert, K., Kretzschmar, J., dos Santos, T.R., Härtig, C., Harnisch, F. (2021):
Making sense of gas measurements: quantification of multicomponent gas mixtures in biological and chemical laboratory experiments
ChemTexts 7 (4), art. 27
full text (doi) - Neubert, K., Schmidt, M., Harnisch, F. (2021):
Platinized titanium as alternative cost-effective anodes for the efficient Kolbe electrolysis in aqueous electrolyte solutions
ChemSusChem 14 (15), 3097 - 3109
full text (doi) - Oliveira, V., Polónia, A.R.M., Cleary, D.F.R., Huang, Y.M., de Voogd, N.J., Nunes da Rocha, U., Gomes, N.C.M. (2021):
Characterization of putative circular plasmids in sponge‐associated bacterial communities using a selective multiply‐primed rolling circle amplification
Mol. Ecol. Resour. 21 (1), 110 - 121
full text (doi) - Pous, N., Korth, B., Osset-Álvarez, M., Balaguer, M.D., Harnisch, F., Puig, S. (2021):
Electrifying biotrickling filters for the treatment of aquaponics wastewater
Bioresour. Technol. 319 , art. 124221
full text (doi) - Qin, W., Stärk, H.-J., Müller, S., Reemtsma, T., Wagner, S. (2021):
Determination of elemental distribution and evaluation of elemental concentration in single Saccharomyces cerevisiae cells using single cell-inductively coupled plasma mass spectrometry
Metallomics 13 (6), mfab032
full text (doi) - Rago, L., Popp, D., Heiker, J.T., Harnisch, F. (2021):
Electroactive microorganisms in mouse feces
Electrochim. Acta 365 , art. 137326
full text (doi) - Rodrigo Quejigo, J., Korth, B., Kuchenbuch, A., Harnisch, F. (2021):
Redox potential heterogeneity in fixed bed electrodes leads to microbial stratification and inhomogeneous performance
ChemSusChem 14 (4), 1155 - 1165
full text (doi) - Rossi, C., Zadra, N., Fevola, C., Ecke, F., Hörnfeldt, B., Kallies, R., Kazimirova, M., Magnusson, M., Olsson, G.E., Ulrich, R.G., Jääskeläinen, A.J., Henttonen, H., Hauffe, H.C. (2021):
Evolutionary relationships of Ljungan virus variants circulating in multi-host systems across Europe
Viruses 13 (7), art. 1317
full text (doi) - Rummel, C.D., Lechtenfeld, O.J., Kallies, R., Benke, A., Herzsprung, P., Rynek, R., Wagner, S., Potthoff, A., Jahnke, A., Schmitt-Jansen, M. (2021):
Conditioning film and early biofilm succession on plastic surfaces
Environ. Sci. Technol. 55 (16), 11006 - 11018
full text (doi) - Santoro, C., Babanova, S., Cristiani, P., Artyushkova, K., Atanassov, P., Bergel, A., Bretschger, O., Brown, R.K., Carpenter, K., Colombo, A., Cortese, R., Erable, B., Harnisch, F., Kodali, M., Phadke, S., Riedl, S., Rosa, L.F.M., Schröder, G. (2021):
How comparable are microbial electrochemical systems around the globe? An electrochemical and microbiological cross‐laboratory study
ChemSusChem 14 (11), 2313 - 2330
full text (doi) - Santoro, C., Babanova, S., Cristiani, P., Artyushkova, K., Atanassov, P., Bergel, A., Bretschger, O., Brown, R.K., Carpenter, K., Colombo, A., Cortese, R., Erable, B., Harnisch, F., Kodali, M., Phadke, S., Riedl, S., Rosa, L.F.M., Schröder, U. (2021):
Cover profile: How comparable are microbial electrochemical systems around the globe? An electrochemical and microbiological cross‐laboratory study
ChemSusChem 14 (11), 2267 - 2267
full text (doi) - Saraiva, J.P., Bartholomäus, A., Kallies, R., Gomes, M., Bicalho, M., Kasmanas, J.C., Vogt, C., Chatzinotas, A., Stadler, P., Dias, O., Nunes da Rocha, U. (2021):
OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes
Life Sci. Alliance 4 (12), e202101167
full text (doi) - Saraiva, J.P., Worrich, A., Karakoç, C., Kallies, R., Chatzinotas, A., Centler, F., Nunes da Rocha, U. (2021):
Mining synergistic microbial interactions: a roadmap on how to integrate multi-omics data
Microorganisms 9 (4), art. 840
full text (doi) - Scarabotti, F., Rago, L., Bühler, K., Harnisch, F. (2021):
The electrode potential determines the yield coefficients of early-stage Geobacter sulfurreducens biofilm anodes
Bioelectrochemistry 140 , art. 107752
full text (doi) - Schmidt, J., Krohn, S., Kallies, R., Schneider, H., Zeller, K., Ziebolz, D., Berg, T., Haak, R. (2021):
Antibacterial effect of a brominated self-etch adhesive on carious dentin - An in vivo study
J. Dent. 105 , art. 103555
full text (doi) - Sun, F., Mellage, A., Gharasoo, M., Melsbach, A., Cao, X., Zimmermann, R., Griebler, C., Thullner, M., Cirpka, O.A., Elsner, M. (2021):
Mass-transfer-limited biodegradation at low concentrations—Evidence from reactive transport modeling of isotope profiles in a bench-scale aquifer
Environ. Sci. Technol. 55 (11), 7386 - 7397
full text (doi) - Sun, F., Peters, J., Thullner, M., Cirpka, O.A., Elsner, M. (2021):
Magnitude of diffusion- and transverse dispersion-induced isotope fractionation of organic compounds in aqueous systems
Environ. Sci. Technol. 55 (8), 4772 - 4782
full text (doi) - Tláskal, V., Brabcová, V., Větrovský, T., Jomura, M., López-Mondéjar, R., Oliveira Monteiro, L.M., Saraiva, J.P., Human, Z.R., Cajthaml, T., Nunes da Rocha, U., Baldrian, P. (2021):
Complementary roles of wood-inhabiting fungi and bacteria facilitate deadwood decomposition
mSystems 6 (1), e01078-20
full text (doi) - Tláskal, V., Brabcová, V., Větrovský, T., López-Mondéjar, R., Oliveira Monteiro, L.M., Saraiva, J.P., Nunes da Rocha, U., Baldrian, P. (2021):
Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
Sci. Data 8 , art. 198
full text (doi) - Tucci, M., Cruz Viggi, C., Resitano, M., Matturro, B., Crognale, S., Pietrini, I., Rossetti, S., Harnisch, F., Aulenta, F. (2021):
Simultaneous removal of hydrocarbons and sulfate from groundwater using a “bioelectric well”
Electrochim. Acta 388 , art. 138636
full text (doi) - Vogel, K., Wei, R., Pfaff, L., Breite, D., Al-Fathi, H., Ortmann, C., Estrela-Lopis, I., Venus, T., Schulze, A., Harms, H., Bornscheuer, U.T., Maskow, T. (2021):
Enzymatic degradation of polyethylene terephthalate nanoplastics analyzed in real time by isothermal titration calorimetry
Sci. Total Environ. 773 , art. 145111
full text (doi) - Voigt, E., Rall, B.C., Chatzinotas, A., Brose, U., Rosenbaum, B. (2021):
Phage strategies facilitate bacterial coexistence under environmental variability
PeerJ 9 , art. e12194
full text (doi) - Vučić, V., Müller, S. (2021):
New developments in biological phosphorus accessibility and recovery approaches from soil and waste streams
Eng. Life Sci. 21 (3-4), 77 - 86
full text (doi) - Vučić, V., Süring, C., Harms, H., Müller, S., Günther, S. (2021):
A framework for P-cycle assessment in wastewater treatment plants
Sci. Total Environ. 760 , art. 143392
full text (doi) - Weitere, M., Altenburger, R., Anlanger, C., Baborowski, M., Bärlund, I., Beckers, L.-M., Borchardt, D., Brack, W., Brase, L., Busch, W., Chatzinotas, A., Deutschmann, B., Eligehausen, J., Frank, K., Graeber, D., Griebler, C., Hagemann, J., Herzsprung, P., Hollert, H., Inostroza, P.A., Jäger, C.G., Kallies, R., Kamjunke, N., Karrasch, B., Kaschuba, S., Kaus, A., Klauer, B., Knöller, K., Koschorreck, M., Krauss, M., Kunz, J.V., Kurz, M.J., Liess, M., Mages, M., Müller, C., Muschket, M., Musolff, A., Norf, H., Pöhlein, F., Reiber, L., Risse-Buhl, U., Schramm, K.-W., Schmitt-Jansen, M., Schmitz, M., Strachauer, U., von Tümpling, W., Weber, N., Wild, R., Wolf, C., Brauns, M. (2021):
Disentangling multiple chemical and non-chemical stressors in a lotic ecosystem using a longitudinal approach
Sci. Total Environ. 769 , art. 144324
full text (doi) - Zhou, J., Saeidi, N., Wick, L.Y., Kopinke, F.-D., Georgi, A. (2021):
Adsorption of polar and ionic organic compounds on activated carbon: Surface chemistry matters
Sci. Total Environ. 794 , art. 148508
full text (doi)
2020 (59)
- Alvarez Esquivel, D.Y., Guo, Y., Brown, R.K., Müller, S., Schröder, U., Harnisch, F. (2020):
Investigating community dynamics and performance during microbial electrochemical degradation of whey
ChemElectroChem 7 (4), 989 - 997
full text (doi) - Askitosari, T.D., Berger, C., Tiso, T., Harnisch, F., Blank, L.M., Rosenbaum, M.A. (2020):
Coupling an electroactive Pseudomonas putida KT2440 with bioelectrochemical rhamnolipid production
Microorganisms 8 (12), art. 1959
full text (doi) - Balciunas, E.M., Kappelmeyer, U., Harms, H., Heipieper, H.J. (2020):
Increasing ibuprofen degradation in constructed wetlands by bioaugmentation with gravel containing biofilms of an ibuprofen-degrading Sphingobium yanoikuyae
Eng. Life Sci. 20 (5-6), 160 - 167
full text (doi) - Banitz, T., Chatzinotas, A., Worrich, A. (2020):
Prospects for integrating disturbances, biodiversity and ecosystem functioning using microbial systems
Front. Ecol. Evol. 8 , art. 21
full text (doi) - Becker, D., Popp, D., Harms, H., Centler, F. (2020):
A modular metagenomics pipeline allowing for the inclusion of prior knowledge using the example of anaerobic digestion
Microorganisms 8 (5), art. 669
full text (doi) - Bernardes, J.P., Mishra, N., Tran, F., Bahmer, T., Best, L., Blase, J.I., Bordoni, D., Franzenburg, J., Geisen, U., Josephs-Spaulding, J., Köhler, P., Künstner, A., Rosati, E., Aschenbrenner, A.C., Bacher, P., Baran, N., Boysen, T., Brandt, B., Bruse, N., Dörr, J., Dräger, A., Elke, G., Ellinghaus, D., Fischer, J., Forster, M., Franke, A., Franzenburg, S., Frey, N., Friedrichs, A., Fuß, J., Glück, A., Hamm, J., Hinrichsen, F., Hoeppner, M.P., Imm, S., Junker, R., Kaiser, S., Kan, Y.H., Knoll, R., Lange, C., Laue, G., Lier, C., Lindner, M., Marinos, G., Markewitz, R., Nattermann, J., Noth, R., Pickkers, P., Rabe, K.F., Renz, A., Röcken, C., Rupp, J., Schaffarzyk, A., Scheffold, A., Schulte-Schrepping, J., Schunk, D., Skowasch, D., Ulas, T., Wandinger, K.-P., Wittig, M., Zimmermann, J., Busch, H., Hoyer, B.F., Kaleta, C., Heyckendorf, J., Kox, M., Rybniker, J., Schreiber, S., Schultze, J.L., Rosenstiel, P., Banovich, N.E., Desai, T., Eickelberg, O., Haniffa, M., Horvath, P., Kropski, J.A., Lafyatis, R., Lundeberg, J., Meyer, K., Nawijn, M.C., Nikolic, M., Montanes, J.O., Pe’er, D., Tata, P.R., Rawlins, E., Regev, A., Reyfman, P., Samakovlis, C., Schultze, J., Shalek, A., Shepherd, D., Spence, J., Teichmann, S., Theis, F., Tsankov, A., van den Berge, M., von Papen, M., Whitsett, J., Zaragosi, L.E., Angelov, A., Bals, R., Bartholomäus, A., Becker, A., Bezdan, D., Bonifacio, E., Bork, P., Clavel, T., Colme-Tatche, M., Diefenbach, A., Dilthey, A., Fischer, N., Förstner, K., Frick, J.-S., Gagneur, J., Goesmann, A., Hain, T., Hummel, M., Janssen, S., Kalinowski, J., Kallies, R., Kehr, B., Keller, A., Kim-Hellmuth, S., Klein, C., Kohlbacher, O., Korbel, J.O., Kurth, I., Landthaler, M., Li, Y., Ludwig, K., Makarewicz, O., Marz, M., McHardy, A., Mertes, C., Nöthen, M., Nürnberg, P., Ohler, U., Ossowski, S., Overmann, J., Peter, S., Pfeffer, K., Poetsch, A.R., Pühler, A., Rajewsky, N., Ralser, M., Rieß, O., Ripke, S., Nunes da Rocha, U., Saliba, A.-E., Sander, L.E., Sawitzki, B., Schiffer, P., Schulte, E.-C., Sczyrba, A., Stegle, O., Stoye, J., Vehreschild, J., Vogel, J., von Kleist, M., Walker, A., Walter, J., Wieczorek, D., Ziebuhr, J. (2020):
Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19
Immunity 53 (6), 1296 - 1314
full text (doi) - Bernardo-Cravo, A.P., Schmeller, D.S., Chatzinotas, A., Vredenburg, V.T., Loyau, A. (2020):
Environmental factors and host microbiomes shape host–pathogen dynamics
Trends Parasitol. 36 (7), 616 - 633
full text (doi) - Borim Corrêa, F., Saraiva, J.P., Stadler, P.F., Nunes da Rocha, U. (2020):
TerrestrialMetagenomeDB: a public repository of curated and standardized metadata for terrestrial metagenomes
Nucleic Acids Res. 48 (D1), D626 - D632
full text (doi) - Carstens, L., Cowan, A.R., Seiwert, B., Schlosser, D. (2020):
Biotransformation of phthalate plasticizers and bisphenol A by marine-derived, freshwater, and terrestrial fungi
Front. Microbiol. 11 , art. 317
full text (doi) - Centler, F., Günnigmann, S., Fetzer, I., Wendeberg, A. (2020):
Keystone species and modularity in microbial hydrocarbon degradation uncovered by network analysis and association rule mining
Microorganisms 8 (2), art. 190
full text (doi) - Chen, S.-C., Sun, G.-X., Yan, Y., Konstantinidis, K.T., Zhang, S.-Y., Deng, Y., Li, X.-M., Cui, H.-L., Musat, F., Popp, D., Rosen, B.P., Zhu, Y.-G. (2020):
The Great Oxidation Event expanded the genetic repertoire of arsenic metabolism and cycling
Proc. Natl. Acad. Sci. U.S.A. 117 (19), 10414 - 10421
full text (doi) - Cichocki, N., Hübschmann, T., Schattenberg, F., Kerckhof, F.M., Overmann, J., Müller, S. (2020):
Bacterial mock communities as standards for reproducible cytometric microbiome analysis
Nat. Protoc. 15 , 2788 - 2812
full text (doi) - Dalby, F.R., Hansen, M.J., Feilberg, A., Kümmel, S., Nikolausz, M. (2020):
Effect of tannic acid combined with fluoride and lignosulfonic acid on anaerobic digestion in the agricultural waste management chain
Bioresour. Technol. 307 , art. 123171
full text (doi) - Feng, L., Lemes Perschke, Y.M., Fontaine, D., Nikolausz, M., Ward, A.J., Nunes da Rocha, U., Borim Corrêa, F., Eriksen, J., Sørensen, P., Møller, H.B. (2020):
Anaerobic digestion of co-ensiled cover crop and barley straw: Effect of co-ensiling ratios, manure addition and impact on microbial community structure
Ind. Crop. Prod. 144 , art. 112025
full text (doi) - Formann, S., Hahn, A., Janke, L., Stinner, W., Sträuber, H., Logroño, W., Nikolausz, M. (2020):
Beyond sugar and ethanol production: Value generation opportunities through sugarcane residues
Front. Energy Res. 8 , art. 579577
full text (doi) - Fricke, C., Harms, H., Maskow, T. (2020):
How to speed up the detection of aerobic microbial contaminations by using isothermal microcalorimetry
J. Therm. Anal. Calorim. 142 (5), 1933 - 1949
full text (doi) - Fricke, C., Xu, J., Jiang, F.-L., Liu, Y., Harms, H., Maskow, T. (2020):
Rapid culture‐based detection of Legionella pneumophila using isothermal microcalorimetry with an improved evaluation method
Microb. Biotechnol. 13 (4), 1262 - 1272
full text (doi) - Fruehauf, H.M., Enzmann, F., Harnisch, F., Ulber, R., Holtmann, D. (2020):
Microbial electrosynthesis – An inventory on technology readiness level and performance of different process variants
Biotechnol. J. 15 (10), art. 2000066
full text (doi) - Greinert, T., Vogel, K., Mühlenweg, J.-K., Sadowski, G., Maskow, T., Held, C. (2020):
Standard Gibbs energy of metabolic reactions: VI. Glyceraldehyde 3-phosphate dehydrogenase reaction
Fluid Phase Equilib. 517 , art. 112597
full text (doi) - Greinert, T., Vogel, K., Seifert, A.I., Siewert, R., Andreeva, I.V., Verevkin, S.P., Maskow, T., Sadowski, G., Held, C. (2020):
Standard Gibbs energy of metabolic reactions: V. Enolase reaction
BBA-Proteins Proteomics 1868 (4), art. 140365
full text (doi) - Guerra, C.A., Heintz-Buschart, A., Sikorski, J., Chatzinotas, A., Guerrero-Ramírez, N., Cesarz, S., Beaumelle, L., Rillig, M.C., Maestre, F.T., Delgado-Baquerizo, M., Buscot, F., Overmann, J., Patoine, G., Phillips, H.R.P., Winter, M., Wubet, T., Küsel, K., Bardgett, R.D., Cameron, E.K., Cowan, D., Grebenc, T., Marín, C., Orgiazzi, A., Singh, B.K., Wall, D.H., Eisenhauer, N. (2020):
Blind spots in global soil biodiversity and ecosystem function research
Nat. Commun. 11 (1), art. 3870
full text (doi) - Haange, S.-B., Jehmlich, N., Krügel, U., Hintschich, C., Wehrmann, D., Hankir, M., Seyfried, F., Froment, J., Hübschmann, T., Müller, S., Wissenbach, D.K., Kang, K.H., Buettner, C., Panagiotou, G., Noll, M., Rolle-Kampczyk, U., Fenske, W., von Bergen, M. (2020):
Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss
Microbiome 8 , art. 13
full text (doi) - Hegner, R., Neubert, K., Kroner, C., Holtmann, D., Harnisch, F. (2020):
Coupled electrochemical and microbial catalysis for the production of polymer bricks
ChemSusChem 13 (19), 5295 - 5300
full text (doi) - Karakoç, C., Clark, A.T., Chatzinotas, A. (2020):
Diversity and coexistence are influenced by time-dependent species interactions in a predator-prey system
Ecol. Lett. 23 (6), 983 - 993
full text (doi) - Koch, C., Kuchenbuch, A., Marosvölgyi, M., Weisshart, K., Harnisch, F. (2020):
Label‐free four‐dimensional visualization of anaerobically growing electroactive biofilms
Cytom. Part A 97 (7), 737 - 741
full text (doi) - König, S., Vogel, H.-J., Harms, H., Worrich, A. (2020):
Physical, chemical and biological effects on soil bacterial dynamics in microscale models
Front. Ecol. Evol. 8 , art. 53
full text (doi) - Kopinke, F.-D., Harms, H. (2020):
Letter: What are the active species in the photocatalytic disinfection of water?
Chem 6 (4), 806 - 807
full text (doi) - Korth, B., Kretzschmar, J., Bartz, M., Kuchenbuch, A., Harnisch, F. (2020):
Determining incremental coulombic efficiency and physiological parameters of early stage Geobacter spp. enrichment biofilms
PLOS One 15 (6), e0234077
full text (doi) - Korth, B., Kuchenbuch, A., Harnisch, F. (2020):
Availability of hydrogen shapes the microbial abundance in biofilm anodes based on Geobacter enrichment
ChemElectroChem 7 (18), 3720 - 3724
full text (doi) - Korth, B., Kuchenbuch, A., Harnisch, F. (2020):
Cover profile: Availability of hydrogen shapes the microbial abundance in biofilm anodes based on Geobacter enrichment
ChemElectroChem 7 (18), 3683 - 3683
full text (doi) - Krause, J.L., Schaepe, S.S., Fritz-Wallace, K., Engelmann, B., Rolle-Kampczyk, U., Kleinsteuber, S., Schattenberg, F., Liu, Z., Müller, S., Jehmlich, N., von Bergen, M., Herberth, G. (2020):
Following the community development of SIHUMIx – a new intestinal in vitro model for bioreactor use
Gut Microbes 11 (4), 1116 - 1129
full text (doi) - Krause, J.L., Schäpe, S.S., Schattenberg, F., Müller, S., Ackermann, G., Rolle-Kampczyk, U.E., Jehmlich, N., Pierzchalski, A., von Bergen, M., Herberth, G. (2020):
The activation of mucosal-associated invariant T (MAIT) cells is affected by microbial diversity and riboflavin utilization in vitro
Front. Microbiol. 11 , art. 755
full text (doi) - Lian, S., Nikolausz, M., Nijenhuis, I., Nunes da Rocha, U., Liu, B., Borim Corrêa, F., Saraiva, J.P., Richnow, H.H. (2020):
Biotransformation of hexachlorocyclohexanes contaminated biomass for energetic utilization demonstrated in continuous anaerobic digestion system
J. Hazard. Mater. 384 , art. 121448
full text (doi) - Liu, B., Kleinsteuber, S., Centler, F., Harms, H., Sträuber, H. (2020):
Competition between butyrate fermenters and chain-elongating bacteria limits the efficiency of medium-chain carboxylate production
Front. Microbiol. 11 , art. 336
full text (doi) - Liu, B., Popp, D., Müller, N., Sträuber, H., Harms, H., Kleinsteuber, S. (2020):
Three novel Clostridia isolates produce n-caproate and iso-butyrate from lactate: comparative genomics of chain-elongating bacteria
Microorganisms 8 (12), art. 1970
full text (doi) - Liu, B., Popp, D., Sträuber, H., Harms, H., Kleinsteuber, S. (2020):
Draft genome sequences of three Clostridia isolates involved in lactate-based chain elongation
Microbiol. Resour. Announc. 9 (32), e00679-20
full text (doi) - Liu, Z., Müller, S. (2020):
Bacterial community diversity dynamics highlight degrees of nestedness and turnover patterns
Cytom. Part A 97 (7), 742 - 748
full text (doi) - Logroño, W., Popp, D., Kleinsteuber, S., Sträuber, H., Harms, H., Nikolausz, M. (2020):
Microbial resource management for ex situ biomethanation of hydrogen at alkaline pH
Microorganisms 8 , art. 614
full text (doi) - López-Mondéjar, R., Tláskal, V., Větrovský, T., Štursová, M., Toscan, R., Nunes da Rocha, U., Baldrian, P. (2020):
Metagenomics and stable isotope probing reveal the complementary contribution of fungal and bacterial communities in the recycling of dead biomass in forest soil
Soil Biol. Biochem. 148 , art. 107875
full text (doi) - Marques, M., Borges, N., Silva, S.G., Nunes da Rocha, U., Lago-Lestón, A., Keller-Costa, T., Costa, R. (2020):
Metagenome-assembled genome sequences of three uncultured Planktomarina sp. strains from the Northeast Atlantic Ocean
Microbiol. Resour. Announc. 9 (12), e00127-20
full text (doi) - Mayr, J.C., Rosa, L.F.M., Klinger, N., Grosch, J.-H., Harnisch, F., Spiess, A.C. (2020):
Response‐surface‐optimized and scaled‐up microbial electrosynthesis of chiral alcohols
ChemSusChem 13 (7), 1808 - 1816
full text (doi) - Mogodiniyai Kasmaei, K., Schlosser, D., Sträuber, H., Kleinsteuber, S. (2020):
Does glucose affect the de-esterification of methyl ferulate by Lactobacillus buchneri?
MicrobiologyOpen 9 (2), e971
full text (doi) - Müller, S., Chang, H.-D. (2020):
Microorganisms and their activities within microbial communities
Cytom. Part A 97 (7), 681 - 682
full text (doi) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M. (2020):
Biotechnological utilization of animal gut microbiota for valorization of lignocellulosic biomass
Appl. Microbiol. Biotechnol. 104 (2), 489 - 508
full text (doi) - Popp, D., Centler, F. (2020):
μBialSim: Constraint-based dynamic simulation of complex microbiomes
Front. Bioeng. Biotechnol. 8 , art. 574
full text (doi) - Risse-Buhl, U., Anlanger, C., Chatzinotas, A., Noss, C., Lorke, A., Weitere, M. (2020):
Near streambed flow shapes microbial guilds within and across trophic levels in fluvial biofilms
Limnol. Oceanogr. 65 (10), 2261 - 2277
full text (doi) - Rohwerder, T. (2020):
New structural insights into bacterial sulfoacetaldehyde and taurine metabolism
Biochem. J. 477 (8), 1367 - 1371
full text (doi) - Rohwerder, T., Rohde, M.-T., Jehmlich, N., Purswani, J. (2020):
Actinobacterial degradation of 2-hydroxyisobutyric acid proceeds via acetone and formyl-CoA by employing a thiamine-dependent lyase reaction
Front. Microbiol. 11 , art. 691
full text (doi) - Sadik, A., Somarribas Patterson, L.F., Öztürk, S., Mohapatra, S.R., Panitz, V., Secker, P.F., Pfänder, P., Loth, S., Salem, H., Prentzell, M.T., Berdel, B., Iskar, M., Faessler, E., Reuter, F., Kirst, I., Kalter, V., Foerster, K.I., Jäger, E., Ramallo Guevara, C., Sobeh, M., Hielscher, T., Poschet, G., Reinhardt, A., Hassel, J.C., Zapatka, M., Hahn, U., von Deimling, A., Hopf, C., Schlichting, R., Escher, B.I., Burhenne, J., Haefeli, W.E., Ishaque, N., Böhme, A., Schäuble, S., Thedieck, K., Trump, S., Seiffert, M., Opitz, C.A. (2020):
IL4I1 is a metabolic immune checkpoint that activates the AHR and promotes tumor progression
Cell 182 (5), 1252 - 1270.e34
full text (doi) - Schmidt, J., Buenger, L., Krohn, S., Kallies, R., Zeller, K., Schneider, H., Ziebolz, D., Berg, T., Haak, R. (2020):
Effect of a bioactive cement on the microbial community in carious dentin after selective caries removal – An in-vivo study
J. Dent. 92 , art. 103264
full text (doi) - Schulte-Schrepping, J., Reusch, N., Paclik, D., Baßler, K., Schlickeiser, S., Zhang, B., Krämer, B., Krammer, T., Brumhard, S., Bonaguro, L., De Domenico, E., Wendisch, D., Grasshoff, M., Kapellos, T.S., Beckstette, M., Pecht, T., Saglam, A., Dietrich, O., Mei, H.E., Schulz, A.R., Conrad, C., Kunkel, D., Vafadarnejad, E., Xu, C.-J., Horne, A., Herbert, M., Drews, A., Thibeault, C., Pfeiffer, M., Hippenstiel, S., Hocke, A., Müller-Redetzky, H., Heim, K.-M., Machleidt, F., Uhrig, A., Bosquillon de Jarcy, L., Jürgens, L., Stegemann, M., Glösenkamp, C.R., Volk, H.-D., Goffinet, C., Landthaler, M., Wyler, E., Georg, P., Schneider, M., Dang-Heine, C., Neuwinger, N., Kappert, K., Tauber, R., Corman, V., Raabe, J., Kaiser, K.M., Vinh, M.T., Rieke, G., Meisel, C., Ulas, T., Becker, M., Geffers, R., Witzenrath, M., Drosten, C., Suttorp, N., von Kalle, C., Kurth, F., Händler, K., Schultze, J.L., Aschenbrenner, A.C., Li, Y., Nattermann, J., Sawitzki, B., Saliba, A.-E., Sander, L.E., Angelov, A., Bals, R., Bartholomäus, A., Becker, A., Bezdan, D., Bonifacio, E., Bork, P., Clavel, T., Colome-Tatche, M., Diefenbach, A., Dilthey, A., Fischer, N., Förstner, K., Frick, J.-S., Gagneur, J., Goesmann, A., Hain, T., Hummel, M., Janssen, S., Kalinowski, J., Kallies, R., Kehr, B., Keller, A., Kim-Hellmuth, S., Klein, C., Kohlbacher, O., Korbel, J.O., Kurth, I., Ludwig, K., Makarewicz, O., Marz, M., McHardy, A., Mertes, C., Nöthen, M., Nürnberg, P., Ohler, U., Ossowski, S., Overmann, J., Peter, S., Pfeffer, K., Poetsch, A.R., Pühler, A., Rajewsky, N., Ralser, M., Rieß, O., Ripke, S., Nunes da Rocha, U., Rosenstiel, P., Schiffer, P., Schulte, E.-C., Sczyrba, A., Stegle, O., Stoye, J., Theis, F., Vehreschild, J., Vogel, J., von Kleist, M., Walker, A., Walter, J., Wieczorek, D., Ziebuhr, J. (2020):
Severe COVID-19 is marked by a dysregulated myeloid cell compartment
Cell 182 (6), 1419 - 1440
full text (doi) - Shan, Y., Liu, L., Liu, Y., Harms, H., Wick, L.Y. (2020):
Effects of electrokinetic phenomena on bacterial deposition monitored by quartz crystal microbalance with dissipation monitoring
Environ. Sci. Technol. 54 (21), 14036 - 14045
full text (doi) - Shan, Y., Qin, J., Harms, H., Wick, L.Y. (2020):
Electrokinetic effects on the interaction of phenanthrene with geo-sorbents
Chemosphere 242 , art. 125161
full text (doi) - Tomaszewski, E.J., Olson, L., Obst, M., Byrne, J.M., Kappler, A., Muehe, E.M. (2020):
Complexation by cysteine and iron mineral adsorption limit cadmium mobility during metabolic activity of Geobacter sulfurreducens
Environ. Sci.-Proc. Imp. 22 (9), 1877 - 1887
full text (doi) - Vogel, K., Greinert, T., Harms, H., Sadowski, G., Held, C., Maskow, T. (2020):
Influence of cytosolic conditions on the reaction equilibrium and the reaction enthalpy of the enolase reaction accessed by calorimetry and van ‘t HOFF
Biochim. Biophys. Acta-Gen. Subj. 1864 (10), art. 129675
full text (doi) - Vogel, K., Greinert, T., Held, C., Harms, H., Maskow, T. (2020):
Application of irreversible thermodynamics to determine the influence of cell mimicking conditions on the kinetics of equilibrium reactions of the glycolysis
Biophys. J. 118 (3, Suppl. 1), 346a - 347a
full text (doi) - Vogel, K., Greinert, T., Reichard, M., Held, C., Harms, H., Maskow, T. (2020):
Thermodynamics and kinetics of glycolytic reactions. Part II: Influence of cytosolic conditions on thermodynamic state variables and kinetic parameters
Int. J. Mol. Sci. 21 (21), art. 7921
full text (doi) - Vogel, K., Greinert, T., Reichard, M., Held, C., Harms, H., Maskow, T. (2020):
Thermodynamics and kinetics of glycolytic reactions. Part I: Kinetic modeling based on irreversible thermodynamics and validation by calorimetry
Int. J. Mol. Sci. 21 (21), art. 8341
full text (doi) - Weise, H., Auge, H., Baessler, C., Bärlund, I., Bennett, E.M., Berger, U., Bohn, F., Bonn, A., Borchardt, D., Brand, F., Chatzinotas, A., Corstanje, R., De Laender, F., Dietrich, P., Dunker, S., Durka, W., Fazey, I., Groeneveld, J., Guilbaud, C.S.E., Harms, H., Harpole, S., Harris, J., Jax, K., Jeltsch, F., Johst, K., Joshi, J., Klotz, S., Kühn, I., Kuhlicke, C., Müller, B., Radchuk, V., Reuter, H., Rinke, K., Schmitt-Jansen, M., Seppelt, R., Singer, A., Standish, R.J., Thulke, H.-H., Tietjen, B., Weitere, M., Wirth, C., Wolf, C., Grimm, V. (2020):
Resilience trinity: safeguarding ecosystem functioning and services across three different time horizons and decision contexts
Oikos 129 (4), 445 - 456
full text (doi)
2019 (56)
- Al-Fathi, H., Koch, M., Lorenz, W.G., Lechner, U. (2019):
Anaerobic degradation of 2,4,5-trichlorophenoxyacetic acid by enrichment cultures from freshwater sediments
Environ. Sci. Pollut. Res. 26 (33), 34459 - 34467
full text (doi) - Badia-Fabregat, M., Rago, L., Baeza, J.A., Guisasola, A. (2019):
Hydrogen production from crude glycerol in an alkaline microbial electrolysis cell
Int. J. Hydrog. Energy 44 (32), 17204 - 17213
full text (doi) - Baleeiro, F.C.F., Kleinsteuber, S., Neumann, A., Sträuber, H. (2019):
Syngas-aided anaerobic fermentation for medium-chain carboxylate and alcohol production: the case for microbial communities
Appl. Microbiol. Biotechnol. 103 (21-22), 8689 - 8709
full text (doi) - Bonk, F., Popp, D., Weinrich, S., Sträuber, H., Becker, D., Kleinsteuber, S., Harms, H., Centler, F. (2019):
Determination of microbial maintenance in acetogenesis and methanogenesis by experimental and modeling techniques
Front. Microbiol. 10 , art. 166
full text (doi) - Borsetto, C., Amos, G.C.A., Nunes da Rocha, U., Mitchell, A.L., Finn, R.D., Laidi, R.F., Vallin, C., Pearce, D.A., Newsham, K.K., Wellington, E.M.H. (2019):
Microbial community drivers of PK/NRP gene diversity in selected global soils
Microbiome 7 , art. 78
full text (doi) - Calabrese, F., Voloshynovska, I., Musat, F., Thullner, M., Schlömann, M., Richnow, H.H., Lambrecht, J., Müller, S., Wick, L.Y., Musat, N., Stryhanyuk, H. (2019):
Quantitation and comparison of phenotypic heterogeneity among single cells of monoclonal microbial populations
Front. Microbiol. 10 , art. 2814
full text (doi) - Chen, S.-C., Musat, N., Lechtenfeld, O.J., Paschke, H., Schmidt, M., Said, N., Popp, D., Calabrese, F., Stryhanyuk, H., Jaekel, U., Zhu, Y.-G., Joye, S.B., Richnow, H.-H., Widdel, F., Musat, F. (2019):
Anaerobic oxidation of ethane by archaea from a marine hydrocarbon seep
Nature 568 (7750), 108 - 111
full text (doi) - Chowdhury, R., Ghosh, S., Manna, D., Das, S., Dutta, S., Kleinsteuber, S., Sträuber, H., Hassan, M.K., Kuittinen, S., Pappinen, A. (2019):
Hybridization of sugar-carboxylate-syngas platforms for the production of bio-alcohols from lignocellulosic biomass (LCB) – A state-of-the-art review and recommendations
Energy Conv. Manag. 200 , art. 112111
full text (doi) - Cohen, Y., Pasternak, Z., Johnke, J., Abed‐Rabbo, A., Kushmaro, A., Chatzinotas, A., Jurkevitch, E. (2019):
Bacteria and micro‐eukaryotes are differentially segregated in sympatric wastewater microhabitats
Environ. Microbiol. 21 (5), 1757 - 1770
full text (doi) - Cossarizza, A., Chang, H.-D., Radbruch, A., Acs, A., Adam, D., Adam-Klages, S., Müller, S., Agace, W.W., et al. (2019):
Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)
Eur. J. Immunol. 49 (10), 1457 - 1973
full text (doi) - Czechowska, K., Lannigan, J., Wang, L., Arcidiacono, J., Ashhurst, T.M., Barnard, R.M., Bauer, S., Bispo, C., Bonilla, D.L., Brinkman, R.R., Cabanski, M., Chang, H.-D., Chakrabarti, L., Chojnowski, G., Cotleur, B., Degheidy, H., Dela Cruz, G.V., Eck, S., Elliott, J., Errington, R., Filby, A., Gagnon, D., Gardner, R., Green, C., Gregory, M., Groves, C.J., Hall, C., Hammes, F., Hedrick, M., Hoffman, R., Icha, J., Ivaska, J., Jenner, D.C., Jones, D., Kerckhof, F.M., Kukat, C., Lanham, D., Leavesley, S., Lee, M., Lin‐Gibson, S., Litwin, V., Liu, Y., Molloy, J., Moore, J.S., Müller, S., Nedbal, J., Niesner, R., Nitta, N., Ohlsson‐Wilhelm, B., Paul, N.E., Perfetto, S., Portat, Z., Props, R., Radtke, S., Rayanki, R., Rieger, A., Rogers, S., Rubbens, P., Salomon, R., Schiemann, M., Sharpe, J., Sonder, S.U., Stewart, J.J., Sun, Y., Ulrich, H., Van Isterdael, G., Vitaliti, A., van Vreden, C., Weber, M., Zimmermann, J., Vacca, G., Wallace, P., Tárnok, A. (2019):
Cyt‐Geist: Current and Future Challenges in Cytometry: Reports of the CYTO 2018 Conference Workshops
Cytom. Part A 95 (6), 598 - 644
full text (doi) - Dias, O., Saraiva, J., Faria, C., Ramirez, M., Pinto, F., Rocha, I. (2019):
iDS372, a phenotypically reconciled model for the metabolism of Streptococcus pneumoniae strain R6
Front. Microbiol. 10 , art. 1283
full text (doi) - Donnenberg, V.S., Müller, S., Houston, J.P., Holden, E. (2019):
Cytometry score: 23 to 4
Cytom. Part A 95 (3), 259 - 260
full text (doi) - Engel, C., Schattenberg, F., Dohnt, K., Schröder, U., Müller, S., Krull, R. (2019):
Long-term behavior of defined mixed cultures of Geobacter sulfurreducens and Shewanella oneidensis in bioelectrochemical systems
Front. Bioeng. Biotechnol. 7 , art. 60
full text (doi) - Fricke, C., Harms, H., Maskow, T. (2019):
Rapid calorimetric detection of bacterial contamination: Influence of the cultivation technique
Front. Microbiol. 10 , art. 2530
full text (doi) - Ghanem, N., Stanley, C.E., Harms, H., Chatzinotas, A., Wick, L.Y. (2019):
Mycelial effects on phage retention during transport in a microfluidic platform
Environ. Sci. Technol. 53 (20), 11755 - 11763
full text (doi) - Guo, Y., Cichocki, N., Schattenberg, F., Geffers, R., Harms, H., Müller, S. (2019):
AgNPs change microbial community structures of wastewater
Front. Microbiol. 9 , art. 3211
full text (doi) - Harnisch, F., Schröder, U. (2019):
Tapping renewables: a new dawn for organic electrosynthesis in aqueous reaction media
ChemElectroChem 6 (16), 4126 - 4133
full text (doi) - Hegner, R., Neubert, K., Rosa, L.F.M., Harnisch, F. (2019):
Engineering electrochemical CO2 reduction to formate under bioprocess‐compatible conditions to bioreactor scale
ChemElectroChem 6 (14), 3731 - 3735
full text (doi) - Hofmann, P., Chatzinotas, A., Harpole, W.S., Dunker, S. (2019):
Temperature and stoichiometric dependence of phytoplankton traits
Ecology 100 (12), e02875
full text (doi) - Hübner, T., Herrmann, A., Kretzschmar, J., Harnisch, F. (2019):
Suitability of fecal sludge from composting toilets as feedstock for carbonization
Journal of Water, Sanitation and Hygiene for Development 9 (4), 616 - 626
full text (doi) - Janke, L., Weinrich, S., Leite, A.F., Sträuber, H., Nikolausz, M., Nelles, M. (2019):
Pre-treatment of filter cake for anaerobic digestion in sugarcane biorefineries: Assessment of batch versus semi-continuous experiments
Renew. Energy 143 , 1416 - 1426
full text (doi) - Kallies, R., Hölzer, M., Brizola Toscan, R., Nunes da Rocha, U., Anders, J., Marz, M., Chatzinotas, A. (2019):
Evaluation of sequencing library preparation protocols for viral metagenomic analysis from pristine aquifer groundwaters
Viruses 11 (6), art. 484
full text (doi) - Kallies, R., Kiesel, B., Schmidt, M., Ghanem, N., Zopfi, J., Hackermüller, J., Harms, H., Wick, L.Y., Chatzinotas, A. (2019):
Complete genome sequence of Pseudoalteromonas virus vB_PspP-H6/1 that infects Pseudoalteromonas sp. strain H6
Mar. Genom. 47 , art. 100667
full text (doi) - Karimi, E., Keller-Costa, T., Slaby, B.M., Cox, C.J., Nunes da Rocha, U., Hentschel, U., Costa, R. (2019):
Genomic blueprints of sponge-prokaryote symbiosis are shared by low abundant and cultivatable Alphaproteobacteria
Sci. Rep. 9 , art. 1999
full text (doi) - Kleinsteuber, S., Rohwerder, T., Lohse, U., Seiwert, B., Reemtsma, T. (2019):
Sated by a zero-calorie sweetener: Wastewater bacteria can feed on acesulfame
Front. Microbiol. 10 , art. 2606
full text (doi) - Klünemann, T., Preuß, A., Adamczack, J., Rosa, L.F.M., Harnisch, F., Layer, G., Blankenfeldt, W. (2019):
Crystal structure of dihydro-heme d1 dehydrogenase NirN from Pseudomonas aeruginosa reveals amino acid residues essential for catalysis
J. Mol. Biol. 431 (17), 3246 - 3260
full text (doi) - Koch, C., Huber, K.J., Bunk, B., Overmann, J., Harnisch, F. (2019):
Trophic networks improve the performance of microbial anodes treating wastewater
npj Biofilms Microbiomes 5 , art. 27
full text (doi) - König, S., Köhnke, M.C., Firle, A.-L., Banitz, T., Centler, F., Frank, K., Thullner, M. (2019):
Disturbance size can be compensated for by spatial fragmentation in soil microbial ecosystems
Front. Ecol. Evol. 7 , art. 290
full text (doi) - Koók, L., Bakonyi, P., Harnisch, F., Kretzschmar, J., Chae, K.-J., Zhen, G., Kumar, G., Rózsenberszki, T., Tóth, G., Nemestóthy, N., Bélafi-Bakó, K. (2019):
Biofouling of membranes in microbial electrochemical technologies: Causes, characterization methods and mitigation strategies
Bioresour. Technol. 279 , 327 - 338
full text (doi) - Korth, B., Harnisch, F. (2019):
Corrigendum: Spotlight on the energy harvest of electroactive microorganisms: The impact of the applied anode potential
Front. Microbiol. 10 , art. 2744
full text (doi) - Korth, B., Harnisch, F. (2019):
Spotlight on the energy harvest of electroactive microorganisms: The impact of the applied anode potential
Front. Microbiol. 10 , art. 1352
full text (doi) - Lambrecht, J., Cichocki, N., Schattenberg, F., Kleinsteuber, S., Harms, H., Müller, S., Sträuber, H. (2019):
Key sub‑community dynamics of medium‑chain carboxylate production
Microb. Cell. Fact. 18 , art. 92
full text (doi) - Lian, S., Wu, L., Nikolausz, M., Lechtenfeld, O.J., Richnow, H.H. (2019):
2H and 13C isotope fractionation analysis of organophosphorus compounds for characterizing transformation reactions in biogas slurry: Potential for anaerobic treatment of contaminated biomass
Water Res. 163 , art. 114882
full text (doi) - Liu, Z., Cichocki, N., Hübschmann, T., Süring, C., Ofiţeru, I.D., Sloan, W.T., Grimm, V., Müller, S. (2019):
Neutral mechanisms and niche differentiation in steady-state insular microbial communities revealed by single cell analysis
Environ. Microbiol. 21 (1), 164 - 181
full text (doi) - Ludwig, J., Höner zu Siederdissen, C., Liu, Z., Stadler, P.F., Müller, S. (2019):
flowEMMi: an automated model-based clustering tool for microbial cytometric data
BMC Bioinformatics 20 , art. 643
full text (doi) - Lv, Z., Leite, A.F., Harms, H., Glaser, K., Liebetrau, J., Kleinsteuber, S., Nikolausz, M. (2019):
Microbial community shifts in biogas reactors upon complete or partial ammonia inhibition
Appl. Microbiol. Biotechnol. 103 (1), 519 - 533
full text (doi) - Maskow, T., Rothe, A., Jakob, T., Paufler, S., Wilhelm, C. (2019):
Photocalorespirometry (Photo-CR): A novel method for access to photosynthetic energy conversion efficiency
Sci. Rep. 9 , art. 9298
full text (doi) - Matz, B., Kupfer, B., Kallies, R., Külshammer, M., Flötenmeyer, M., Kreil, T.R., Eis-Hübinger, A.M. (2019):
Secondary structure of DNA released from purified capsids of human parvovirus B19 under moderate denaturing conditions
J. Gen. Virol. 100 (5), 812 - 827
full text (doi) - Mayr, J.C., Grosch, J.-H., Hartmann, L., Rosa, L.F.M., Spiess, A.C., Harnisch, F. (2019):
Resting Escherichia coli as chassis for microbial electrosynthesis: production of chiral alcohols
ChemSusChem 12 (8), 1631 - 1634
full text (doi) - Mayr, J.C., Grosch, J.-H., Hartmann, L., Rosa, L.F.M., Spiess, A.C., Harnisch, F. (2019):
Front cover: Resting Escherichia coli as chassis for microbial electrosynthesis: production of chiral alcohols (ChemSusChem 8/2019)
ChemSusChem 12 (8), 1478, 1482
full text (doi) - Meng, X., Liu, B., Zhang, H., Wu, J., Yuan, X., Cui, Z. (2019):
Co-composting of the biogas residues and spent mushroom substrate: Physicochemical properties and maturity assessment
Bioresour. Technol. 276 , 281 - 287
full text (doi) - Richert, I., Yager, P.L., Dinasquet, J., Logares, R., Riemann, L., Wendeberg, A., Bertilsson, S., Scofield, D.G. (2019):
Summer comes to the Southern Ocean: how phytoplankton shape bacterioplankton communities far into the deep dark sea
Ecosphere 10 (3), e02641
full text (doi) - Rosa, L.F.M., Hunger, S., Zschernitz, T., Strehlitz, B., Harnisch, F. (2019):
Integrating electrochemistry into bioreactors: effect of the upgrade kit on mass transfer, mixing time and sterilizability
Front. Energy Res. 7 , art. 98
full text (doi) - Rosado, P.M., Leite, D.C.A., Duarte, G.A.S., Chaloub, R.M., Jospin, G., Nunes da Rocha, U., Saraiva, J.P., Dini-Andreote, F., Eisen, J.A., Bourne, D.G., Peixoto, R.S. (2019):
Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation
ISME J. 13 (4), 921 - 936
full text (doi) - Schäpe, S.S., Krause, J.L., Engelmann, B., Fritz-Wallace, K., Schattenberg, F., Liu, Z., Müller, S., Jehmlich, N., Rolle-Kampczyk, U., Herberth, G., von Bergen, M. (2019):
The simplified human intestinal microbiota (SIHUMIx) shows high structural and functional resistance against changing transit times in in vitro bioreactors
Microorganisms 7 (12), art. 641
full text (doi) - Schmidt, R., Ulanova, D., Wick, L.Y., Bode, H.B., Garbeva, P. (2019):
Microbe-driven chemical ecology: past, present and future
ISME J. 13 (11), 2656 - 2663
full text (doi) - Schwab, L., Rago, L., Koch, C., Harnisch, F. (2019):
Identification of Clostridium cochlearium as an electroactive microorganism from the mouse gut microbiome
Bioelectrochemistry 130 , art. 107334
full text (doi) - Sendek, A., Karakoç, C., Wagg, C., Domínguez-Begines, J., Martucci do Couto, G., van der Heijden, M.G.A., Naz, A.A., Lochner, A., Chatzinotas, A., Klotz, S., Gómez-Aparicio, L., Eisenhauer, N. (2019):
Drought modulates interactions between arbuscular mycorrhizal fungal diversity and barley genotype diversity
Sci. Rep. 9 , art. 9650
full text (doi) - Vásquez Piñeros, M.A., Martínez-Lavanchy, P.M., Schmidt, K., Mardones, M., Heipieper, H.J. (2019):
Changes in bacterial diversity and catabolic gene abundance during the removal of dimethylphenol isomers in laboratory scale constructed wetlands
Appl. Microbiol. Biotechnol. 103 (1), 505 - 517
full text (doi) - Weinrich, S., Koch, S., Bonk, F., Popp, D., Benndorf, D., Klamt, S., Centler, F. (2019):
Augmenting biogas process modeling by resolving intracellular metabolic activity
Front. Microbiol. 10 , art. 1095
full text (doi) - Wieczorek, A.S., Schmidt, O., Chatzinotas, A., von Bergen, M., Gorissen, A., Kolb, S. (2019):
Ecological functions of agricultural soil bacteria and microeukaryotes in chitin degradation: A case study
Front. Microbiol. 10 , art. 1293
full text (doi) - Witkowski, P.T., Drexler, J.F., Kallies, R., Ličková, M., Bokorová, S., Maganga, G.D., Szemes, T., Leroy, E.M., Krüger, D.H., Drosten, C., Klempa, B. (2019):
Corrigendum to “Phylogenetic analysis of a newfound bat-borne hantavirus supports a Laurasiatherian host association for ancestral mammalian hantaviruses” [Infect. Genet. Evol. 41 (2016) 113–119]
Infect. Genet. Evol. 67 , 245
full text (doi) - Worrich, A., Musat, N., Harms, H. (2019):
Associational effects in the microbial neighborhood
ISME J. 13 (9), 2143 - 2149
full text (doi) - Zahn, M., Kurteva-Yaneva, N., Schuster, J., Krug, U., Georgi, T., Müller, R.H., Rohwerder, T., Sträter, N. (2019):
Structures of 2-Hydroxyisobutyric Acid-CoA ligase reveal determinants of substrate specificity and describe a multi-conformational catalytic cycle
J. Mol. Biol. 431 (15), 2747 - 2761
full text (doi) - Ziganshin, A.M., Wintsche, B., Seifert, J., Carstensen, M., Born, J., Kleinsteuber, S. (2019):
Spatial separation of metabolic stages in a tube anaerobic baffled reactor: reactor performance and microbial community dynamics
Appl. Microbiol. Biotechnol. 103 (9), 3915 - 3929
full text (doi)
2018 (64)
- Atashgahi, S., Hornung, B., van der Waals, M.J., Nunes da Rocha, U., Hugenholtz, F., Nijsse, B., Molenaar, D., van Spanning, R., Stams, A.J.M., Gerritse, J., Smidt, H. (2018):
A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways
Sci. Rep. 8 , art. 4490
full text (doi) - Aulenta, F., Puig, S., Harnisch, F. (2018):
Microbial electrochemical technologies: maturing but not mature. Editorial
Microb. Biotechnol. 11 (1), 18 - 19
full text (doi) - Becher, E., Heese, A., Claußen, L., Eisen, S., Jehmlich, N., Rohwerder, T., Purswani, J. (2018):
Active site alanine preceding catalytic cysteine determines unique substrate specificity in bacterial CoA‐acylating prenal dehydrogenase
FEBS Lett. 592 (7), 1150 - 1160
full text (doi) - Bonk, F., Popp, D., Harms, H., Centler, F. (2018):
PCR-based quantification of taxa-specific abundances in microbial communities: Quantifying and avoiding common pitfalls
J. Microbiol. Methods 153 , 139 - 147
full text (doi) - Bonk, F., Popp, D., Weinrich, S., Sträuber, H., Kleinsteuber, S., Harms, H., Centler, F. (2018):
Ammonia inhibition of anaerobic volatile fatty acid degrading microbial communities
Front. Microbiol. 9 , art. 2921
full text (doi) - Bonk, F., Popp, D., Weinrich, S., Sträuber, H., Kleinsteuber, S., Harms, H., Centler, F. (2018):
Intermittent fasting for microbes: how discontinuous feeding increases functional stability in anaerobic digestion
Biotechnol. Biofuels 11 , art. 274
full text (doi) - Broekgaarden, C., Pelgrom, K.T.B., Bucher, J., van Dam, N.M., Grosser, K., Pieterse, C.M.J., van Kaauwen, M., Steenhuis, G., Voorrips, R.E., de Vos, M., Vosman, B., Worrich, A., van Wees, S.C.M. (2018):
Combining QTL mapping with transcriptome and metabolome profiling reveals a possible role for ABA signaling in resistance against the cabbage whitefly in cabbage
PLOS One 13 (11), e0206103
full text (doi) - Concha, E., Heipieper, H.J., Wick, L.Y., Ciudad, G.A., Navia, R. (2018):
Effects of limonene, n-decane and n-decanol on growth and membrane fatty acid composition of the microalga Botryococcus braunii
AMB Express 8 (1), art. 189
full text (doi) - Deveau, A., Bonito, G., Uehling, J., Paoletti, M., Becker, M., Bindschedler, S., Hacquard, S., Hervé, V., Labbé, J., Lastovetsky, O.A., Mieszkin, S., Millet, L.J., Vajna, B., Junier, P., Bonfante, P., Krom, B.P., Olsson, S., van Elsas, J.D., Wick, L.Y. (2018):
Bacterial–fungal interactions: ecology, mechanisms and challenges
FEMS Microbiol. Rev. 42 (3), 335 - 352
full text (doi) - Fiedler, D., Maskow, T. (2018):
A note of thanks from the guest editors to Professor Wolfgang Babel – An inspiring researcher and highly esteemed teacher
Eng. Life Sci. 18 (7), 412 - 413
full text (doi) - Ghanem, N., Trost, M., Sanchez Fontanet, L., Harms, H., Chatzinotas, A., Wick, L.Y. (2018):
Changes of the specific infectivity of tracer phages during transport in porous media
Environ. Sci. Technol. 52 (6), 3486 - 3492
full text (doi) - Grobbler, C., Virdis, B., Nouwens, A., Harnisch, F., Rabaey, K., Bond, P.L. (2018):
Effect of the anode potential on the physiology and proteome of Shewanella oneidensis MR-1
Bioelectrochemistry 119 , 172 - 179
full text (doi) - Günther, S., Becker, D., Hübschmann, T., Reinert, S., Kleinsteuber, S., Müller, S., Wilhelm, C. (2018):
Long-term biogas production from glycolate by diverse and highly dynamic communities
Microorganisms 6 (4), art. 130
full text (doi) - Günther, S., Grunert, M., Müller, S. (2018):
Overview of recent advances in phosphorus recovery for fertilizer production
Eng. Life Sci. 18 (7), 434 - 439
full text (doi) - Harnisch, F., Urban, C. (2018):
Electrobiorefineries: Unlocking the synergy of electrochemical and microbial conversions
Angew. Chem.-Int. Edit. 57 (32), 10016 - 10023
full text (doi) - Hegner, R., Rosa, L.F.M., Harnisch, F. (2018):
Electrochemical CO2 reduction to formate at indium electrodes with high efficiency and selectivity in pH neutral electrolytes
Appl. Catal. B-Environ. 238 , 546 - 556
full text (doi) - Hofmann, U., Fenu, A., Beffa, T., Beimfohr, C., Weemaes, M., Yu, L., Schrader, S., Moeder, M., Schlosser, D. (2018):
Evaluation of the applicability of the aquatic ascomycete Phoma sp. UHH 5‐1‐03 for the removal of pharmaceutically active compounds from municipal wastewaters using membrane bioreactors
Eng. Life Sci. 18 (7), 510 - 519
full text (doi) - Jahangiri, E., Thomas, I., Schulze, A., Seiwert, B., Cabana, H., Schlosser, D. (2018):
Characterisation of electron beam irradiation-immobilised laccase for application in wastewater treatment
Sci. Total Environ. 624 , 309 - 322
full text (doi) - Janke, L., Weinrich, S., Leite, A.F., Sträuber, H., Radetski, C.M., Nikolausz, M., Nelles, M., Stinner, W. (2018):
Year-round biogas production in sugarcane biorefineries: Process stability, optimization and performance of a two-stage reactor system
Energy Conv. Manag. 168 , 188 - 199
full text (doi) - Jimenez-Sanchez, C., Wick, L.Y., Ortega-Calvo, J.-J. (2018):
Impact of chemoeffectors on bacterial motility, transport, and contaminant degradation in sand-filled percolation columns
Environ. Sci. Technol. 52 (18), 10673 - 10679
full text (doi) - Kahl, S., Kleinsteuber, S., Nivala, J., van Afferden, M., Reemtsma, T. (2018):
Emerging biodegradation of the previously persistent artificial sweetener acesulfame in biological wastewater treatment
Environ. Sci. Technol. 55 (5), 2717 - 2725
full text (doi) - Karakoç, C., Radchuk, V., Harms, H., Chatzinotas, A. (2018):
Interactions between predation and disturbances shape prey communities
Sci. Rep. 8 , art. 2968
full text (doi) - Karaoz, U., Couradeau, E., Nunes da Rocha, U., Lim, H.-C., Northen, T., Garcia-Pichel, F., Brodie, E.L. (2018):
Large blooms of Bacillales (Firmicutes) underlie the response to wetting of cyanobacterial biocrusts at various stages of maturity
mBio 9 (2), e01366-16
full text (doi) - Keller, A.H., Kleinsteuber, S., Vogt, C. (2018):
Anaerobic benzene mineralization by nitrate-reducing and sulfate-reducing microbial consortia enriched
from the same site: comparison of community composition and degradation characteristics
Microb. Ecol. 75 (4), 941 - 953
full text (doi) - Keller, A.H., Kleinsteuber, S., Vogt, C. (2018):
Correction to: Anaerobic benzene mineralization by nitrate-reducing and sulfate-reducing microbial consortia enriched from the same site: comparison of community composition and degradation characteristics (vol 75, pg 941, 2017)
Microb. Ecol. 75 (4), 954 - 954
full text (doi) - Khan, A.M., Wick, L.Y., Thullner, M. (2018):
Applying the Rayleigh approach for stable isotope-based analysis of VOC biodegradation in diffusion-dominated systems
Environ. Sci. Technol. 52 (14), 7785 - 7795
full text (doi) - Koch, C., Korth, B., Harnisch, F. (2018):
Microbial ecology-based engineering of Microbial Electrochemical Technologies
Microb. Biotechnol. 11 (1), 22 - 38
full text (doi) - Koch, C., Müller, S. (2018):
Personalized microbiome dynamics – Cytometric fingerprints for routine diagnostics
Mol. Asp. Med. 59 , 123 - 134
full text (doi) - König, S., Worrich, A., Banitz, T., Centler, F., Harms, H., Kästner, M., Miltner, A., Wick, L.Y., Thullner, M., Frank, K. (2018):
Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems
Sci. Rep. 8 , art. 9488
full text (doi) - König, S., Worrich, A., Banitz, T., Harms, H., Kästner, M., Miltner, A., Wick, L.Y., Frank, K., Thullner, M., Centler, F. (2018):
Functional resistance to recurrent spatially heterogeneous disturbances is facilitated by increased activity of surviving bacteria in a virtual ecosystem
Front. Microbiol. 9 , art. 734
full text (doi) - Kretzschmar, J., Böhme, P., Liebetrau, J., Mertig, M., Harnisch, F. (2018):
Microbial electrochemical sensors for anaerobic digestion process control – performance of electroactive biofilms under real conditions
Chem. Eng. Technol. 41 (4), 687 - 695
full text (doi) - Krohn, S., Zeller, K., Böhm, S., Chatzinotas, A., Harms, H., Hartmann, I., Heidtmann, A., Herber, A., Kaiser, T., Treuheit, M., Hoffmeister, A., Berg, T., Engelmann, C. (2018):
Molecular quantification and differentiation of Candida species in biological specimens of patients with liver cirrhosis
PLOS One 13 (6), e0197319
full text (doi) - Kuppardt, A., Fester, T., Härtig, C., Chatzinotas, A. (2018):
Rhizosphere protists change metabolite profiles in Zea mays
Front. Microbiol. 9 , art. 857
full text (doi) - Lambrecht, J., Schattenberg, F., Harms, H., Müller, S. (2018):
Characterizing microbiome dynamics – flow cytometry based workflows from pure cultures to natural communities
J. Vis. Exp. (137), e58033
full text (doi) - Lechner, U., Türkowsky, D., Dinh, T.T.H., Al-Fathi, H., Schwoch, S., Franke, S., Gerlach, M.-S., Koch, M., von Bergen, M., Jehmlich, N., Dang, T.C.H. (2018):
Desulfitobacterium contributes to the microbial transformation of 2,4,5‐T by methanogenic enrichment cultures from a Vietnamese active landfill
Microb. Biotechnol. 11 (6), 1137 - 1156
full text (doi) - Lian, S., Nikolausz, M., Nijenhuis, I., Leite, A.F., Richnow, H.H. (2018):
Biotransformation and inhibition effects of hexachlorocyclohexanes during biogas production from contaminated biomass characterized by isotope fractionation concepts
Bioresour. Technol. 250 , 683 - 690
full text (doi) - Liu, Z., Cichocki, N., Bonk, F., Günther, S., Schattenberg, F., Harms, H., Centler, F., Müller, S. (2018):
Ecological stability properties of microbial communities assessed by flow cytometry
mSphere 3 (1), e00564-17
full text (doi) - Lv, Z., Jiang, J.H., Liebetrau, J., Richnow, H.H., Fischer, A., Ács, N., Nikolausz, M. (2018):
Ammonium chloride vs urea-induced ammonia inhibition of the biogas process assessed by stable isotope analysis
Chem. Eng. Technol. 41 (4), 671 - 679
full text (doi) - Meng, X., Liu, B., Xi, C., Luo, X., Yuan, X., Wang, X., Zhu, W., Wang, H., Cui, Z. (2018):
Effect of pig manure on the chemical composition and microbial diversity during co-composting with spent mushroom substrate and rice husks
Bioresour. Technol. 251 , 22 - 30
full text (doi) - Newcomer, M.E., Hubbard, S.S., Fleckenstein, J.H., Maier, U., Schmidt, C., Thullner, M., Ulrich, C., Flipo, F., Rubin, Y. (2018):
Influence of hydrological perturbations and riverbed sediment characteristics on hyporheic zone respiration of CO2 and N2
J. Geophys. Res.-Biogeosci. 123 (3), 902 - 922
full text (doi) - Ozbayram, E.G., Akyol, C., Ince, B., Karakoç, C., Ince, O. (2018):
Rumen bacteria at work: bioaugmentation strategies to enhance biogas production from cow manure
J. Appl. Microbiol. 124 (2), 491 - 502
full text (doi) - Ozbayram, E.G., Ince, O., Ince, B., Harms, H., Kleinsteuber, S. (2018):
Comparison of rumen and manure microbiomes and implications for the inoculation of anaerobic digesters
Microorganisms 6 (1), art. 15
full text (doi) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M., Ince, B., Ince, O. (2018):
Bioaugmentation of anaerobic digesters treating lignocellulosic feedstock by enriched microbial consortia
Eng. Life Sci. 18 (7), 440 - 446
full text (doi) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M., Ince, B., Ince, O. (2018):
Enrichment of lignocellulose-degrading microbial communities from natural and engineered methanogenic environments
Appl. Microbiol. Biotechnol. 102 (2), 1035 - 1043
full text (doi) - Peters, K., Worrich, A., Weinhold, A., Alka, O., Balcke, G., Birkemeyer, C., Bruelheide, H., Calf, O.W., Dietz, S., Dührkop, K., Gaquerel, E., Heinig, U., Kücklich, M., Macel, M., Müller, C., Poeschl, Y., Pohnert, G., Ristok, C., Rodríguez, V.M., Ruttkies, C., Schumann, M., Schweiger, R., Shahaf, N., Steinbeck, C., Tortosa, M., Treutler, H., Ueberschaar, N., Velasco, P., Weiß, B.M., Widdig, A., Neumann, S., van Dam, N.M. (2018):
Current challenges in plant eco-metabolomics
Int. J. Mol. Sci. 19 (5), art. 1385
full text (doi) - Pons, S., Bindschedler, S., Sebag, D., Junier, P., Verrecchia, E., Cailleau, G. (2018):
Biocontrolled soil nutrient distribution under the influence of an oxalogenic-oxalotrophic ecosystem
Plant Soil 425 (1–2), 145 - 160
full text (doi) - Pozdnyakova, N., Schlosser, D., Dubrovskaya, E., Balandina, S., Sigida, E., Grinev, V., Turkovskaya, O. (2018):
The degradative activity and adaptation potential of the litter-decomposing fungus Stropharia rugosoannulata
World J. Microbiol. Biotechnol. 34 , art. 133
full text (doi) - Rodrigo Quejigo, J., Rosa, L.F.M., Harnisch, F. (2018):
Electrochemical characterization of bed electrodes using voltammetry of single granules
Electrochem. Commun. 90 , 78 - 82
full text (doi) - Russel, M., Sophocleous, M., JiaJia, S., Xu, W., Xiao, L., Maskow, T., Alam, M., Georgiou, J. (2018):
High-frequency, dielectric spectroscopy for the detection of electrophysiological/biophysical differences in different bacteria types and concentrations
Anal. Chim. Acta 1028 , 86 - 95
full text (doi) - Schmeller, D.S., Loyau, A., Bao, D., Brack, W., Chatzinotas, A., De Vleeschouwer, F., Friesen, J., Gandois, L., Hansson, S.V., Haver, M., Le Roux, G., Shen, J., Teisserenc, R., Vredenburg, V.T. (2018):
People, pollution and pathogens – Global change impacts in mountain freshwater ecosystems
Sci. Total Environ. 622-623 , 756 - 763
full text (doi) - Schmidt, S.I., Kreft, J.-U., Mackay, R., Picioreanu, C., Thullner, M. (2018):
Elucidating the impact of micro-scale heterogeneous bacterial distribution on biodegradation
Adv. Water Resour. 116 , 67 - 76
full text (doi) - Shan, Y., Harms, H., Wick, L.Y. (2018):
Electric field effects on bacterial deposition and transport in porous media
Environ. Sci. Technol. 52 (24), 14294 - 14301
full text (doi) - Sharma, A., Schmidt, M., Kiesel, B., Mahato, N.K., Cralle, L., Singh, Y., Richnow, H.H., Gilbert, J.A., Arnold, W., Lal, R. (2018):
Bacterial and archaeal viruses of Himalayan hot springs at Manikaran modulate host genomes
Front. Microbiol. 9 , art. 3095
full text (doi) - Sträuber, H., Bühligen, F., Kleinsteuber, S., Dittrich‐Zechendorf, M. (2018):
Carboxylic acid production from ensiled crops in anaerobic solid‐state fermentation ‐ trace elements as pH controlling agents support microbial chain elongation with lactic acid
Eng. Life Sci. 18 (7), 447 - 458
full text (doi) - van Gelder, S., Röhrig, N., Schattenberg, F., Cichocki, N., Schumann, J., Schmalz, G., Haak, R., Ziebolz, D., Müller, S. (2018):
A cytometric approach to follow variation and dynamics of the salivary microbiota
Methods 134–135 , 67 - 79
full text (doi) - Vásquez-Piñeros, M.A., Martínez-Lavanchy, P.M., Jehmlich, N., Pieper, D.H., Rincón, C.A., Harms, H., Junca, H., Heipieper, H.J. (2018):
Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation
BMC Microbiol. 18 , art. 108
full text (doi) - Vilajeliu-Pons, A., Koch, C., Balaguer, M.D., Colprim, J., Harnisch, F., Puig, S. (2018):
Microbial electricity driven anoxic ammonium removal
Water Res. 130 , 168 - 175
full text (doi) - Wintsche, B., Jehmlich, N., Popp, D., Harms, H., Kleinsteuber, S. (2018):
Metabolic adaptation of methanogens in anaerobic digesters upon trace element limitation
Front. Microbiol. 9 , art. 405
full text (doi) - Xu, J., He, H., Wang, Y.-Y., Yan, R., Zhou, L.-J., Liu, Y., Jiang, F.-L., Maskow, T., Liu, Y. (2018):
New aspects of the environmental risks of quantum dots: prophage activation
Environ. Sci.-Nano 5 (7), 1556 - 1566
full text (doi) - Xu, J., Jiang, F.-L., Liu, Y., Kiesel, B., Maskow, T. (2018):
An enhanced bioindicator for calorimetric monitoring of prophage-activating chemicals in the trace concentration range
Eng. Life Sci. 18 (7), 475 - 483
full text (doi) - Xu, J., Kiesel, B., Kallies, R., Jiang, F.-L., Liu, Y., Maskow, T. (2018):
A fast and reliable method for monitoring of prophage-activating chemicals
Microb. Biotechnol. 11 (6), 1112 - 1120
full text (doi) - Ye, F., Ma, M.-H., Op den Camp, H.J.M., Chatzinotas, A., Li, L., Lv, M.-Q., Wu, S.-J., Wang, Y. (2018):
Different recovery processes of soil ammonia oxidizers from flooding disturbance
Microb. Ecol. 76 (4), 1041 - 1052
full text (doi) - Zhalnina, K., Louie, K.B., Hao, Z., Mansoori, N., Nunes da Rocha, U., Shi, S., Cho, H., Karaoz, U., Loqué, D., Bowen, B.P., Firestone, M.K., Northen, T.R., Brodie, E.L. (2018):
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
Nat. Microbiol. 3 (4), 470 - 480
full text (doi) - Zimmermann, J., Durek, P., Kühl, A.A., Schattenberg, F., Maschmeyer, P., Siracusa, F., Lehmann, K., Westendorf, K., Weber, M., Riedel, R., Müller, S., Radbruch, A., Chang, H.-D. (2018):
The intestinal microbiota determines the colitis-inducing potential of T-bet-deficient Th cells in mice
Eur. J. Immunol. 48 (1), 161 - 167
full text (doi)
2017 (56)
- Altwasser, V., Pätz, R.R., Lemke, T., Paufler, S., Maskow, T. (2017):
A simple method for the measurement of metabolic heat production rates during solid-state fermentations using β-carotene production with Blakeslea trispora as a model system
Eng. Life Sci. 17 (6), 620 - 628
full text (doi) - Bock, C., Chatzinotas, A., Boenigk, J. (2017):
Genetic diversity in chrysophytes: Comparison of different gene markers
Fottea 17 (2), 209 - 221
full text (doi) - Bonk, F., Bastidas-Oyanedel, J.-R., Yousef, A.F., Schmidt, J.E. (2017):
Exploring the selective lactic acid production from food waste in uncontrolled pH mixed culture fermentations using different reactor configurations
Bioresour. Technol. 238 , 416 - 424
full text (doi) - Brown, R.K., Schmidt, U.C., Harnisch, F., Schröder, U. (2017):
Combining hydrogen evolution and corrosion data - A case study on the economic viability of selected metal cathodes in microbial electrolysis cells
J. Power Sources 356 , 473 - 483
full text (doi) - Cossarizza, A., Chang, H.-D., Radbruch, A., Akdis, M., Andrä, I., Annunziato, F., Bacher, P., Barnaba, V., Battistini, L., Bauer, W.M., Baumgart, S., Becher, B., Beisker, W., Berek, C., Blanco, A., Borsellino, G., Boulais, P.E., Brinkman, R.R., Büscher, M., Busch, D.H., Bushnell, T.P., Cao, X., Cavani, A., Chattopadhyay, P.K., Cheng, Q., Chow, S., Clerici, M., Cooke, A., Cosma, A., Cosmi, L., Cumano, A., Dang, V.D., Davies, D., De Biasi, S., Del Zotto, G., Müller, S., Müller, W., et al. (2017):
Guidelines for the use of flow cytometry and cell sorting in immunological studies
Eur. J. Immunol. 47 (10), 1584 - 1797
full text (doi) - Cruz Viggi, C., Simonetti, S., Palma, E., Pagliaccia, P., Braguglia, C., Fazi, S., Baronti, S., Assunta Navarra, M., Pettiti, I., Koch, C., Harnisch, F., Aulenta, F. (2017):
Enhancing methane production from food waste fermentate using biochar: the added value of electrochemical testing in pre‑selecting the most effective type of biochar
Biotechnol. Biofuels 10 , art. 303
full text (doi) - Dinasquet, J., Richert, I., Logares, R., Yager, P., Bertilsson, S., Riemann, L. (2017):
Mixing of water masses caused by a drifting iceberg affects bacterial activity, community composition and substrate utilization capability in the Southern Ocean
Environ. Microbiol. 19 (6), 2453 - 2467
full text (doi) - Geisen, S., Mitchell, E.A.D., Wilkinson, D.M., Adl, S., Bonkowski, M., Brown, M.W., Fiore-Donno, A.M., Heger, T.J., Jassey, V.E.J., Krashevska, V., Lahr, D.J.G., Marcisz, K., Mulot, M., Payne, R., Singer, D., Anderson, O.R., Charman, D.J., Ekelund, F., Griffiths, B.S., Rønn, R., Smirnov, A., Bass, ´D., Belbahri, L., Berney, C., Blandenier, Q., Chatzinotas, A., Clarholm, M., Dunthorn, M., Feest, A., Fernández, L.D., Foissner, W., Fournier, B., Gentekaki, E., Hájek, M., Helder, J., Jousset, A., Koller, R., Kumar, S., La Terza, A., Lamentowicz, M., Mazei, Y., Santos, S.S., Seppey, C.V.W., Spiegel, F.W., Walochnik, J., Winding, A., Lara, E. (2017):
Soil protistology rebooted: 30 fundamental questions to start with
Soil Biol. Biochem. 111 , 94 - 103
full text (doi) - Gharasoo, M., Thullner, M., Elsner, M. (2017):
Introduction of a new platform for parameter estimation of kinetically complex environmental systems
Environ. Modell. Softw. 98 , 12 - 20
full text (doi) - Gimkiewicz, C., Hegner, R., Gutensohn, M., Koch, C., Harnisch, F. (2017):
Study of electrochemical reduction of CO2 for future use in secondary microbial electrochemical technologies
ChemSusChem 10 (5), 958 - 967
full text (doi) - Guo, Y., Baumgart, S., Stärk, H.-J., Harms, H., Müller, S. (2017):
Mass cytometry for detection of silver at the bacterial single cell level
Front. Microbiol. 8 , art. 1326
full text (doi) - Guo, Y., Stärk, H.J., Hause, G., Schmidt, M., Harms, H., Wick, L.Y., Müller, S. (2017):
Heterogenic response of prokaryotes toward silver nanoparticles and ions is facilitated by phenotypes and attachment of silver aggregates to cell surfaces
Cytom. Part A 91 (8), 775 - 784
full text (doi) - Harnisch, F., Schmid, J. (2017):
Editorial to special issue of Engineering in Life Sciences Emerging biotechnologies viewed by emerging bioengineers (EBEB)
Eng. Life Sci. 17 (1), 4 - 5
full text (doi) - Hegner, R., Koch, C., Riechert, V., Harnisch, F. (2017):
Microbiome-based carboxylic acids production: from serum bottles to bioreactors
RSC Advances 7 (25), 15362 - 15371
full text (doi) - Hubalek, V., Buck, M., Tan, B., Foght, J., Wendeberg, A., Berry, D., Bertilsson, S., Eiler, A. (2017):
Vitamin and amino acid auxotrophy in anaerobic consortia operating under methanogenic conditions
mSystems 2 (5), e00038-17
full text (doi) - Inostroza, N.G., Barra, P.J., Wick, L.Y., Mora, M.L., Jorquera, M.A. (2017):
Effect of rhizobacterial consortia from undisturbed arid- and agro-ecosystems on wheat growth under different conditions
Lett. Appl. Microbiol. 64 (2), 158 - 163
full text (doi) - Jahangiri, E., Seiwert, B., Reemtsma, T., Schlosser, D. (2017):
Laccase- and electrochemically mediated conversion of triclosan: Metabolite formation and influence on antibacterial activity
Chemosphere 168 , 549 - 558
full text (doi) - Janke, L., Weinrich, S., Leite, A.F., Schüch, A., Nikolausz, M., Nelles, M., Stinner, W. (2017):
Optimization of semi-continuous anaerobic digestion of sugarcane straw co-digested with filter cake: Effects of macronutrients supplementation on conversion kinetics
Bioresour. Technol. 245 , 35 - 43
full text (doi) - Janke, L., Weinrich, S., Leite, A.F., Terzariol, F.K., Nikolausz, M., Nelles, M., Stinner, W. (2017):
Improving anaerobic digestion of sugarcane straw for methane production: combined benefits of mechanical and sodium hydroxide pretreatment for process designing
Energy Conv. Manag. 141 , 378 - 389
full text (doi) - Johnke, J., Baron, M., Leeuw, M., Kushmaro, A., Jurkevitch, E., Harms, H., Chatzinotas, A. (2017):
A generalist protist predator enables coexistence in multitrophic predator-prey systems containing a phage and the bacterial predator Bdellovibrio
Front. Ecol. Evol. 5 , art. 124
full text (doi) - Johnke, J., Boenigk, J., Harms, H., Chatzinotas, A. (2017):
Killing the killer: predation between protists and predatory bacteria
FEMS Microbiol. Lett. 364 (9), fnx089
full text (doi) - Jousset, A., Bienhold, C., Chatzinotas, A., Gallien, L., Gobet, A., Kurm, V., Küsel, K., Rillig, M.C., Rivett, D.W., Salles, J.F., van der Heijden, M.G.A., Youssef, N.H., Zhang, X., Wei, Z., Hol, W.H.G. (2017):
Where less may be more: how the rare biosphere pulls ecosystems strings
ISME J. 11 (4), 853 - 862
full text (doi) - Kallies, R., Kiesel, B., Schmidt, M., Kacza, J., Ghanem, N., Narr, A., Zopfi, J., Wick, L.Y., Hackermüller, J., Harms, H., Chatzinotas, A. (2017):
Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies
Stand. Genomic Sci. 12 , art. 20
full text (doi) - Karakoç, C., Singer, A., Johst, K., Harms, H., Chatzinotas, A. (2017):
Transient recovery dynamics of a predator–prey system under press and pulse disturbances
BMC Ecology 17 , art. 13
full text (doi) - Kleinert, F., Kallies, R., Hort, M., Zweynert, A., Szekat, C., Nagel, M., Bierbaum, G. (2017):
Influence of IS256 on genome variability and formation of small-colony variants in Staphylococcus aureus
Antimicrob. Agents Chemother. 61 (8), e00144-17
full text (doi) - Koch, C., Kuchenbuch, A., Kracke, F., Bernhardt, P.V., Krömer, J.O., Harnisch, F. (2017):
Predicting and experimental evaluating bio-electrochemical synthesis — A case study with Clostridium kluyveri
Bioelectrochemistry 118 , 114 - 122
full text (doi) - König, S., Worrich, A., Centler, F., Wick, L.Y., Miltner, A., Kästner, M., Thullner, M., Frank, K., Banitz, T. (2017):
Modelling functional resilience of microbial ecosystems: Analysis of governing processes
Environ. Modell. Softw. 89 , 31 - 39
full text (doi) - Korth, B., Maskow, T., Günther, S., Harnisch, F. (2017):
Estimating the energy content of wastewater using combustion calorimetry and different drying processes
Front. Energy Res. 5 , art. 23
full text (doi) - Kretzschmar, J., Koch, C., Liebetrau, J., Mertig, M., Harnisch, F. (2017):
Electroactive biofilms as sensor for volatile fatty acids: Cross sensitivity, response dynamics, latency and stability
Sens. Actuator B-Chem. 241 , 466 - 472
full text (doi) - Kretzschmar, J., Riedl, S., Brown, R.K., Schröder, U., Harnisch, F. (2017):
eLatrine: lessons learned from the development of a low-tech MFC based on cardboard electrodes for the treatment of human feces
J. Electrochem. Soc. 164 (3), H3065 - H3072
full text (doi) - Krueger, M.C., Seiwert, B., Prager, A., Zhang, S., Abel, B., Harms, H., Schlosser, D. (2017):
Degradation of polystyrene and selected analogues by biological Fenton chemistry approaches: opportunities and limitations
Chemosphere 173 , 520 - 528
full text (doi) - Lambrecht, J., Cichocki, N., Hübschmann, T., Koch, C., Harms, H., Müller, S. (2017):
Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence
Microb. Cell. Fact. 16 , art. 180
full text (doi) - Liang, X., Guo, C., Liao, C., Liu, S., Wick, L.Y., Peng, D., Yi, X., Lu, G., Yin, H., Dang, Z. (2017):
Drivers and applications of integrated clean-up technologies for surfactant-enhanced remediation of environments contaminated with polycyclic aromatic hydrocarbons (PAHs)
Environ. Pollut. 225 , 129 - 140
full text (doi) - Lucas, R., Groeneveld, J., Harms, H., Johst, K., Frank, K., Kleinsteuber, S. (2017):
A critical evaluation of ecological indices for the comparative analysis of microbial communities based on molecular datasets
FEMS Microbiol. Ecol. 93 (1), fiw209
full text (doi) - Meyer-Cifuentes, I., Martinez-Lavanchy, P.M., Marin-Cevada, V., Böhnke, S., Harms, H., Müller, J.A., Heipieper, H.J. (2017):
Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model
PLOS One 12 (4), e0174750
full text (doi) - Narr, A., Nawaz, A., Wick, L.Y., Harms, H., Chatzinotas, A. (2017):
Soil viral communities vary temporally and along a land use transect as revealed by virus-like particle counting and a modified community fingerprinting approach (fRAPD)
Front. Microbiol. 8 , art. 1975
full text (doi) - Otto, S., Bruni, E.P., Harms, H., Wick, L.Y. (2017):
Catch me if you can: dispersal and foraging of Bdellovibrio bacteriovorus 109J along mycelia
ISME J. 11 (2), 386 - 393
full text (doi) - Otto, S., Harms, H., Wick, L.Y. (2017):
Effects of predation and dispersal on bacterial abundance and contaminant biodegradation
FEMS Microbiol. Ecol. 93 (2), fiw241
full text (doi) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M., Ince, B., Ince, O. (2017):
Effect of bioaugmentation by cellulolytic bacteria enriched from sheep rumen on methane production from wheat straw
Anaerobe 46 , 122 - 130
full text (doi) - Perruchon, C., Chatzinotas, A., Omirou, M., Vasileiadis, S., Menkissoglou-Spiroudi, U., Karpouzas, D.G. (2017):
Isolation of a bacterial consortium able to degrade the fungicide thiabendazole: the key role of a Sphingomonas phylotype
Appl. Microbiol. Biotechnol. 101 (9), 3881 - 3893
full text (doi) - Pezzella, C., Macellaro, G., Sannia, G., Raganati, F., Olivieri, G., Marzocchella, A., Schlosser, D., Piscitelli, A. (2017):
Exploitation of Trametes versicolor for bioremediation of endocrine disrupting chemicals in bioreactors
PLOS One 12 (6), e0178758
full text (doi) - Popp, D., Plugge, C.M., Kleinsteuber, S., Harms, H., Sträuber, H. (2017):
Inhibitory effect of coumarin on syntrophic fatty acid-oxidizing and methanogenic cultures and biogas reactor microbiomes
Appl. Environ. Microb. 83 (13), e00438-17
full text (doi) - Popp, D., von Gillhaussen, P., Weidlich, E.W.A., Sträuber, H., Harms, H., Temperton, V.M. (2017):
Methane yield of biomass from extensive grassland is affected by compositional changes induced by order of arrival
GCB Bioenergy 9 (10), 1555 - 1562
full text (doi) - Pronk, G.J., Heister, K., Vogel, C., Babin, D., Bachmann, J., Ding, G.-C., Ditterich, F., Gerzabek, M.H., Giebler, J., Hemkemeyer, M., Kandeler, E., Mouvenchery, Y.K., Miltner, A., Poll, C., Schaumann, G.E., Smalla, K., Steinbach, A., Tanuwidjaja, I., Tebbe, C.C., Wick, L.Y., Woche, S.K., Totsche, K.U., Schloter, M., Kögel-Knabner, I. (2017):
Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments
Biol. Fert. Soils 53 (1), 9 - 22
full text (doi) - Rakowska, M.I., Smit, M.P.J., Kupryianchyk, D., Qin, J., Koelmans, A.A., Rijnaarts, H.H.M., Grotenhuis, T. (2017):
Turbulent mixing accelerates PAH desorption due to fragmentation of sediment particle aggregates
J. Soils Sediments 17 (1), 277 - 285
full text (doi) - Rohde, M.-T., Tischer, S., Harms, H., Rohwerder, T. (2017):
Production of 2-hydroxyisobutyric acid from methanol by Methylobacterium extorquens AM1 expressing (R)-3-hydroxybutyryl coenzyme A-isomerizing enzymes
Appl. Environ. Microb. 83 (3), e02622-16
full text (doi) - Rosa, L.F.M., Hunger, S., Gimkiewicz, C., Zehnsdorf, A., Harnisch, F. (2017):
Paving the way for bioelectrotechnology: Integrating electrochemistry into bioreactors
Eng. Life Sci. 17 (1), 77 - 85
full text (doi) - Rosa, L.F.M., Koch, C., Korth, B., Harnisch, F. (2017):
Electron harvest and treatment of amendment free municipal wastewater using microbial anodes: A case study
J. Power Sources 356 , 319 - 323
full text (doi) - Schmidt, J., Fester, T., Schulz, E., Michalzik, B., Buscot, F., Gutknecht, J. (2017):
Effects of plant-symbiotic relationships on the living soil microbial community and microbial necromass in a long-term agro-ecosystem
Sci. Total Environ. 581–582 , 756 - 765
full text (doi) - Schröder, U., Harnisch, F. (2017):
Life electric—nature as a blueprint for the development of microbial electrochemical technologies
Joule 1 (2), 244 - 252
full text (doi) - Schultze-Nobre, L., Wiessner, A., Bartsch, C., Paschke, H., Stefanakis, A.I., Aylward, L.A., Kuschk, P. (2017):
Removal of dimethylphenols and ammonium in laboratory-scale horizontal subsurface flow constructed wetlands
Eng. Life Sci. 17 (12), 1224 - 1233
full text (doi) - Urban, C., Harnisch, F. (2017):
Deterioration of aqueous n-octanoate electrolysis with electrolytic conductivity collapse caused by the formation of n-octanoic acid/n-octanoate agglomerates
ChemElectroChem 4 (6), 1378 - 1389
full text (doi) - Urban, C., Xu, J., Sträuber, H., dos Santos Dantas, T.R., Mühlenberg, J., Härtig, C., Angenent, L.T., Harnisch, F. (2017):
Production of drop-in fuels from biomass at high selectivity by combined microbial and electrochemical conversion
Energy Environ. Sci. 10 (10), 2231 - 2244
full text (doi) - Winter, M., Thürmann, L., Gu, Z., Schüürmann, G., Herberth, G., Hinz, D., von Bergen, M., Harms, H., Olek, S., Röder, S., Borte, M., Eils, R., Lehmann, I., Trump, S. (2017):
The benzene metabolite 1,4-benzoquinone reduces regulatory T-cell function: A potential mechanism for tobacco smoke–associated atopic dermatitis
J. Allergy Clin. Immunol. 140 (2), 603 - 605
full text (doi) - Worrich, A., Stryhanyuk, H., Musat, N., König, S., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Richnow, H.-H., Miltner, A., Kästner, M., Wick, L.Y. (2017):
Mycelium-mediated transfer of water and nutrients stimulates bacterial activity in dry and oligotrophic environments
Nat. Commun. 8 , art. 15472
full text (doi) - Zhou, Z.-Q., Yang, L.-Y., Yan, R., Zhao, J., Liu, Y.-Q., Lai, L., Jiang, F.-L., Maskow, T., Liu, Y. (2017):
Mn-Doped ZnSe quantum dots initiated mild and rapid cation exchange for tailoring the composition and optical properties of colloid nanocrystals: novel template, new applications
Nanoscale 9 (8), 2824 - 2835
full text (doi)
2016 (52)
- Akyol, C., Ozbayram, E.G., Kleinsteuber, S., Ince, B. (2016):
Anaerobic co-digestion of cow manure and barley: Effect of cow manure to barley ratio on methane production and digestion stability
Environ. Prog. Sustain. Energy 35 (2), 589 - 595
full text (doi) - Alvarez-Zaldívar, P., Centler, F., Maier, U., Thullner, M., Imfeld, G. (2016):
Biogeochemical modelling of in situ biodegradation and stable isotope fractionation of intermediate chloroethenes in a horizontal subsurface flow wetland
Ecol. Eng. 90 , 170 - 179
full text (doi) - Banitz, T., Frank, K., Wick, L.Y., Harms, H., Johst, K. (2016):
Spatial metrics as indicators of biodegradation benefits from bacterial dispersal networks
Ecol. Indic. 60 , 54 - 63
full text (doi) - Berthold, T., Centler, F., Hübschmann, T., Remer, R., Thullner, M., Harms, H., Wick, L.Y. (2016):
Mycelia as a focal point for horizontal gene transfer among soil bacteria
Sci. Rep. 6 , art. 36390
full text (doi) - Brussaard, C.P.D., Peperzak, L., Beggah, S., Wick, L.Y., Wuerz, B., Weber, J., Arey, J.S., van der Burg, B., Jonas, A., Huisman, J., van der Meer, J.R. (2016):
Immediate ecotoxicological effects of short-lived oil spills on marine biota
Nat. Commun. 7 , art. 11206
full text (doi) - Bühligen, F., Lucas, R., Nikolausz, M., Kleinsteuber, S. (2016):
A T-RFLP database for the rapid profiling of methanogenic communities in anaerobic digesters
Anaerobe 39 , 114 - 116
full text (doi) - Chakravorty, S., Bhattacharya, S., Chatzinotas, A., Chakraborty, W., Bhattacharya, D., Gachhui, R. (2016):
Kombucha tea fermentation: Microbial and biochemical dynamics
Int. J. Food Microbiol. 220 , 63 - 72
full text (doi) - Coban, H., Miltner, A., Centler, F., Kästner, M. (2016):
Effects of compost, biochar and manure on carbon mineralization of biogas residues applied to soil
Eur. J. Soil Sci. 67 (2), 217 - 225
full text (doi) - de Carvalho, C.C.C.R., Fischer, M.A., Kirsten, S., Würz, B., Wick, L.Y., Heipieper, H.J. (2016):
Adaptive response of Rhodococcus opacus PWD4 to salt and phenolic stress on the level of mycolic acids
AMB Express 6 , art. 66
full text (doi) - Ehlen, L., Tödtmann, J., Specht, S., Kallies, R., Papies, J., Müller, M.A., Junglen, S., Drosten, C., Eckerle, I. (2016):
Epithelial cell lines of the cotton rat (Sigmodon hispidus) are highly susceptible in vitro models to zoonotic Bunya-, Rhabdo-, and Flaviviruses
Virol. J. 13 , art. 74
full text (doi) - Ghanem, N., Kiesel, B., Kallies, R., Harms, H., Chatzinotas, A., Wick, L.Y. (2016):
Marine phages as tracers: effects of size, morphology, and physico–chemical surface properties on transport in a porous medium
Environ. Sci. Technol. 50 (23), 12816 - 12824
full text (doi) - Gimkiewicz, C., Hunger, S., Harnisch, F. (2016):
Evaluating the feasibility of microbial electrosynthesis based on Gluconobacter oxydans
ChemElectroChem 3 (9), 1337 - 1346
full text (doi) - Grossmann, L., Beisser, D., Bock, C., Chatzinotas, A., Jensen, M., Preisfeld, A., Psenner, R., Rahmann, S., Wodniok, S., Boenigk, J. (2016):
Trade‐off between taxon diversity and functional diversity in European lake ecosystems
Mol. Ecol. 25 (23), 5876 - 5888
full text (doi) - Günther, S., Faust, K., Schumann, J., Harms, H., Raes, J., Müller, S. (2016):
Species-sorting and mass-transfer paradigms control managed natural metacommunities
Environ. Microbiol. 18 (12), 4862 - 4877
full text (doi) - Hofmann, J., Peltri, G., Sträuber, H., Müller, L., Schumacher, B., Müller, U., Liebetrau, J. (2016):
Statistical interpretation of semi-continuous anaerobic digestion experiments on the laboratory scale
Chem. Eng. Technol. 39 (4), 643 - 651
full text (doi) - Hofmann, U., Schlosser, D. (2016):
Biochemical and physicochemical processes contributing to the removal of endocrine-disrupting chemicals and pharmaceuticals by the aquatic ascomycete Phoma sp. UHH 5-1-03
Appl. Microbiol. Biotechnol. 100 (5), 2381 - 2399
full text (doi) - Jahn, M., Vorpahl, C., Hübschmann, T., Harms, H., Müller, S. (2016):
Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR
Microb. Cell. Fact. 15 , art. 211
full text (doi) - Janke, A., Leite, A., Batista, K., Weinrich, S., Sträuber, H., Nikolausz, M., Nelles, M., Stinner, W. (2016):
Optimization of hydrolysis and volatile fatty acids production from sugarcane filter cake: Effects of urea supplementation and sodium hydroxide pretreatment
Bioresour. Technol. 199 , 235 - 244
full text (doi) - Janke, L., Leite, A.F., Batista, K., Silva, W., Nikolausz, M., Nelles, M., Stinner, W. (2016):
Enhancing biogas production from vinasse in sugarcane biorefineries: Effects of urea and trace elements supplementation on process performance and stability
Bioresour. Technol. 217 , 10 - 20
full text (doi) - Janke, L., Leite, A.F., Nikolausz, M., Radetski, C.M., Nelles, M., Stinner, W. (2016):
Comparison of start-up strategies and process performance during semi-continuous anaerobic digestion of sugarcane filter cake co-digested with bagasse
Waste Manage. 48 , 199 - 208
full text (doi) - Jeske, J.T., Müller, R.A., Wendeberg, A., Bertilsson, S. (2016):
Microscale decoupling of sediment oxygen consumption and microbial biomass in an oligotrophic lake
Freshw. Biol. 61 (9), 1477 - 1491
full text (doi) - Khan, A.M., Wick, L.Y., Harms, H., Thullner, M. (2016):
Biodegradation of vapor-phase toluene in unsaturated porous media: Column experiments
Environ. Pollut. 211 , 325 - 331
full text (doi) - Koch, C., Harnisch, F. (2016):
What is the essence of microbial electroactivity?
Front. Microbiol. 7 , art. 1890
full text (doi) - Koch, C., Harnisch, F. (2016):
Is there a specific ecological niche for electroactive microorganisms?
ChemElectroChem 3 (9), 1282 - 1295
full text (doi) - Korth, B., Maskow, T., Picioreanu, C., Harnisch, F. (2016):
The microbial electrochemical Peltier heat: an energetic burden and engineering chance for primary microbial electrochemical technologies
Energy Environ. Sci. 9 (8), 2539 - 2544
full text (doi) - Kretzschmar, J., Rosa, L.F.M., Zosel, J., Mertig, M., Liebetrau, J., Harnisch, F. (2016):
A microbial biosensor platform for inline quantification of acetate in anaerobic digestion: potential and challenges
Chem. Eng. Technol. 39 (4), 637 - 642
full text (doi) - Krueger, M.C., Bergmann, M., Schlosser, D. (2016):
Widespread ability of fungi to drive quinone redox cycling for biodegradation
FEMS Microbiol. Lett. 363 (11), fnw105
full text (doi) - Leite, A.F., Janke, L., Harms, H., Richnow, H.-H., Nikolausz, M. (2016):
Lessons learned from the microbial ecology resulting from different inoculation strategies for biogas production from waste products of the bioethanol/sugar industry
Biotechnol. Biofuels 9 , art. 144
full text (doi) - Lieder, S., Jahn, M., Koepff, J., Müller, S., Takors, R. (2016):
Environmental stress speeds up DNA replication in Pseudomonas putida in chemostat cultivations
Biotechnol. J. 11 (1), 155 - 163
full text (doi) - Lünsmann, V., Kappelmeyer, U., Benndorf, R., Martínez-Lavanchy, P.M., Taubert, A., Adrian, L., Duarte, M., Pieper, D.H., von Bergen, M., Müller, J.A., Heipieper, H.J., Jehmlich, N. (2016):
In situ protein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model
Environ. Microbiol. 18 (4), 1176 - 1186
full text (doi) - Mulat, D.G., Jacobi, H.F., Feilberg, A., Adamsen, A.P.S., Richnow, H.-H., Nikolausz, M. (2016):
Changing feeding regimes to demonstrate flexible biogas production: effects on process performance, microbial community structure, and methanogenesis pathways
Appl. Environ. Microb. 82 (2), 438 - 449
full text (doi) - Newcomer, M.E., Hubbard, S.S., Fleckenstein, J.H., Maier, U., Schmidt, C., Thullner, M., Ulrich, C., Flipo, N., Rubin, Y. (2016):
Simulating bioclogging effects on dynamic riverbed permeability and infiltration
Water Resour. Res. 52 (4), 2883 - 2900
full text (doi) - Otto, S., Banitz, T., Thullner, M., Harms, H., Wick, L.Y. (2016):
Effects of facilitated bacterial dispersal on the degradation and emission of a desorbing contaminant
Environ. Sci. Technol. 50 (12), 6320 - 6326
full text (doi) - Popp, D., Harms, H., Sträuber, H. (2016):
The alkaloid gramine in the anaerobic digestion process—inhibition and adaptation of the methanogenic community
Appl. Microbiol. Biotechnol. 100 (16), 7311 - 7322
full text (doi) - Rohde, M.-T., Paufler, S., Harms, H., Maskow, T. (2016):
Calorespirometric feeding control enhances bioproduction from toxic feedstocks—Demonstration for biopolymer production out of methanol
Biotechnol. Bioeng. 113 (10), 2113 - 2121
full text (doi) - Saleem, M., Fetzer, I., Harms, H., Chatzinotas, A. (2016):
Trophic complexity in aqueous systems: bacterial species richness and protistan predation regulate dissolved organic carbon and dissolved total nitrogen removal
Proc. R. Soc. B-Biol. Sci. 283 (1825), art. 20152724
full text (doi) - Schweigert, M., Herrmann, S., Miltner, A., Fester, T., Kästner, M. (2016):
Corrigendum to "Fate of ectomycorrhizal fungal biomass in a soil bioreactor system and its contribution to soil organic matter formation" [Soil Biol. Biogeochem. 88 (2015) 120–127]
Soil Biol. Biochem. 92 , 242
full text (doi) - Stang, C., Harnisch, F. (2016):
The dilemma of supporting electrolytes for electroorganic synthesis: a case study on Kolbe electrolysis
ChemSusChem 9 (1), 50 - 60
full text (doi) - Starke, R., Keller, A., Jehmlich, N., Vogt, C., Richnow, H.H., Kleinsteuber, S., von Bergen, M., Seifert, J. (2016):
Pulsed 13C2-acetate protein-SIP unveils Epsilonproteobacteria as dominant acetate utilizers in a sulfate-reducing microbial community mineralizing benzene
Microb. Ecol. 71 (4), 901 - 911
full text (doi) - Stefanakis, A.I., Seeger, E., Dorer, C., Sinke, A., Thullner, M. (2016):
Performance of pilot-scale horizontal subsurface flow constructed wetlands treating groundwater contaminated with phenols and petroleum derivatives
Ecol. Eng. 95 , 514 - 526
full text (doi) - Steinauer, K., Chatzinotas, A., Eisenhauer, N. (2016):
Root exudate cocktails: the link between plant diversity and soil microorganisms?
Ecol. Evol. 6 (20), 7387 - 7396
full text (doi) - Stolpovsky, K., Fetzer, I., van Cappellen, P., Thullner, M. (2016):
Influence of dormancy on microbial competition under intermittent substrate supply: insights from model simulations
FEMS Microbiol. Ecol. 92 (6), fiw071
full text (doi) - Sträuber, H., Lucas, R., Kleinsteuber, S. (2016):
Metabolic and microbial community dynamics during the anaerobic digestion of maize silage in a two-phase process
Appl. Microbiol. Biotechnol. 100 (1), 479 - 491
full text (doi) - Vila, T., Nazir, R., Rozental, S., dos Santos, G.M.P., Calixto, R.O.R., Barreto-Bergter, E., Wick, L.Y., van Elsas, J.D. (2016):
The role of hydrophobicity and surface receptors at hyphae of Lyophyllum sp. strain Karsten in the interaction with Burkholderia terrae BS001 – Implications for interactions in soil
Front. Microbiol. 7 , art. 1689
full text (doi) - Wintsche, B., Glaser, K., Sträuber, H., Centler, F., Liebetrau, J., Harms, H., Kleinsteuber, S. (2016):
Trace elements induce predominance among methanogenic activity in anaerobic digestion
Front. Microbiol. 7 , art. 2034
full text (doi) - Witkowski, P.T., Drexler, J.F., Kallies, R., Ličková, M., Bokorová, S., Mananga, G.D., Szemes, T., Leroy, E.M., Krüger, D.H., Drosten, C., Klempa, B. (2016):
Phylogenetic analysis of a newfound bat-borne hantavirus supports a laurasiatherian host association for ancestral mammalian hantaviruses
Infect. Genet. Evol. 41 , 113 - 119
full text (doi) - Worrich, A., König, S., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Miltner, A., Wick, L.Y., Kaestner, M. (2016):
Bacterial dispersal promotes biodegradation in heterogeneous systems exposed to osmotic stress
Front. Microbiol. 7 , art. 1214
full text (doi) - Worrich, A., König, S., Miltner, A., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Kästner, M., Wick, L.Y. (2016):
Mycelium-like networks increase bacterial dispersal, growth, and biodegradation in a model ecosystem at various water potentials
Appl. Environ. Microb. 82 (10), 2902 - 2908
full text (doi) - Zhou, S., Nikolausz, M., Zhang, J., Riya, S., Terada, A., Hosomi, M. (2016):
Variation of the microbial community in thermophilic anaerobic digestion of pig manure mixed with different ratios of rice straw
J. Biosci. Bioeng. 122 (3), 334 - 340
full text (doi) - Ziganshin, A.M., Schmidt, T., Lv, Z., Liebetrau, J., Richnow, H.H., Kleinsteuber, S., Nikolausz, M. (2016):
Reduction of the hydraulic retention time at constant high organic loading rate to reach the microbial limits of anaerobic digestion in various reactor systems
Bioresour. Technol. 217 , 62 - 71
full text (doi) - Ziganshin, A.M., Ziganshina, E.E., Kleinsteuber, S., Nikolausz, M. (2016):
Comparative analysis of methanogenic communities in different laboratory-scale anaerobic digesters
Archaea 2016 , art. 3401272
full text (doi) - Zimmermann, J., Hübschmann, T., Schattenberg, F., Schumann, J., Durek, P., Riedel, R., Friedrich, M., Glauben, R., Siegmund, B., Radbruch, A., Müller, S., Chang, H.-D. (2016):
High-resolution microbiota flow cytometry reveals dynamic colitis-associated changes in fecal bacterial composition
Eur. J. Immunol. 46 (5), 1300 - 1303
full text (doi)
2015 (58)
- Šantl-Temkiv, T., Sahyoun, M., Finster, K., Hartmann, S., Augustin-Bauditz, S., Stratmann, F., Wex, H., Clauss, T., Woetmann Nielsen, N., Havskov Sørensen, J., Smith Korsholm, U., Wick, L.Y., Gosewinkel Karlson, U. (2015):
Characterization of airborne ice-nucleation-active bacteria and bacterial fragments
Atmos. Environ. 109 , 105 - 117
full text (doi) - Araya, K., Ugarte, A., Azócar, L., Valerio, O., Wick, L.Y., Ciudad, G. (2015):
Whole cell three phase bioreactors allow for effective production of fatty acid alkyl esters derived from microalgae lipids
Fuel 144 , 25 - 32
full text (doi) - Brown, R.K., Harnisch, F., Dockhorn, T., Schröder, U. (2015):
Examining sludge production in bioelectrochemical systems treating domestic wastewater
Bioresour. Technol. 198 , 913 - 917
full text (doi) - Centler, F., Thullner, M. (2015):
Chemotactic preferences govern competition and pattern formation in simulated two-strain microbial communities
Front. Microbiol. 6 , art. 40
full text (doi) - dos Santos, T.R., Harnisch, F., Nilges, P., Schröder, U. (2015):
Electrochemistry for biofuel generation: transformation of fatty acids and triglycerides to diesel-like olefin/ether mixtures and olefins
ChemSusChem 8 (5), 886 - 893
full text (doi) - dos Santos, T.R., Nilges, P., Sauter, W., Harnisch, F., Schröder, U. (2015):
Electrochemistry for the generation of renewable chemicals: electrochemical conversion of levulinic acid
RSC Advances 5 (34), 26634 - 26643
full text (doi) - El Amrani, A., Dumas, A.-S., Wick, L.Y., Yergeau, E., Berthomé, R. (2015):
“Omics” insights into PAH degradation toward improved green remediation biotechnologies
Environ. Sci. Technol. 49 (19), 11281 - 11291
full text (doi) - Fester, T. (2015):
Plant metabolite profiles and the buffering capacities of ecosystems
Phytochemistry 110 , 6 - 12
full text (doi) - Fetzer, I., Johst, K., Schäwe, R., Banitz, T., Harms, H., Chatzinotas, A. (2015):
The extent of functional redundancy changes as species’ roles shift in different environments
Proc. Natl. Acad. Sci. U.S.A. 112 (48), 14888 - 14893
full text (doi) - Freel, K.C., Krueger, M.C., Farasin, J., Brochier-Armanet, C., Barbe, V., Andrès, J., Cholley, P.-E., Dillies, M.-A., Jagla, B., Koechler, S., Leva, Y., Magdelenat, G., Plewniak, F., Proux, C., Coppée, J.-Y., Bertin, P.N., Heipieper, H.J., Arsène-Ploetze, F. (2015):
Adaptation in toxic environments: arsenic genomic islands in the bacterial genus Thiomonas
PLOS One 10 (9), e0139011
full text (doi) - Gharasoo, M., Centler, F., van Cappellen, P., Wick, L.Y., Thullner, M. (2015):
Kinetics of substrate biodegradation under the cumulative effects of bioavailability and self-inhibition
Environ. Sci. Technol. 49 (9), 5529 - 5537
full text (doi) - Glaser, K., Kuppardt, A., Boenigk, J., Harms, H., Fetzer, I., Chatzinotas, A. (2015):
The influence of environmental factors on protistan microorganisms in grassland soils along a land-use gradient
Sci. Total Environ. 537 , 33 - 42
full text (doi) - Grobbler, C., Virdis, B., Nouwens, A., Harnisch, F., Rabaey, K., Bond, P.L. (2015):
Use of SWATH mass spectrometry for quantitative proteomic investigation of Shewanella oneidensis MR-1 biofilms grown on graphite cloth electrodes
Syst. Appl. Microbiol. 38 , 135 - 139
full text (doi) - Günther, S., Müller, S. (2015):
Facilitated gate setting by sequential dot plot scanning
Cytom. Part A 87 (7), 661 - 664
full text (doi) - Harnisch, F., Rosa, L.F.M., Kracke, F., Virdis, B., Krömer, J.O. (2015):
Electrifying white biotechnology: engineering and economic potential of electricity-driven bio-production
ChemSusChem 8 (5), 758 - 766
full text (doi) - Jahn, M., Günther, S., Müller, S. (2015):
Non-random distribution of macromolecules as driving forces for phenotypic variation
Curr. Opin. Microbiol. 25 , 49 - 55
full text (doi) - Janke, L., Leite, A., Nikolausz, M., Schmidt, T., Liebetrau, J., Nelles, M., Stinner, W. (2015):
Biogas production from sugarcane waste: assessment on kinetic challenges for process designing
Int. J. Mol. Sci. 16 (9), 20685 - 20703
full text (doi) - Jimenez-Sanchez, C., Wick, L.Y., Cantos, M., Ortega-Calvo, J.-J. (2015):
Impact of dissolved organic matter on bacterial tactic motility, attachment, and transport
Environ. Sci. Technol. 49 (7), 4498 - 4505
full text (doi) - Keller, A.H., Schleinitz, K.M., Starke, R., Bertilsson, S., Vogt, C., Kleinsteuber, S. (2015):
Metagenome-based metabolic reconstruction revealsthe ecophysiological function of Epsilonproteobacteria in a hydrocarbon-contaminated sulfidic aquifer
Front. Microbiol. 6 , art. 1396
full text (doi) - King, N., Müller, S. (2015):
Environmental microbiology: Revisiting the physiology of microorganisms on the single cell scale. Editorial overview
Curr. Opin. Microbiol. 25 , v - vi
full text (doi) - Koch, C., Kuchenbuch, A., Kretzschmar, J., Wedwitschka, H., Liebetrau, J., Müller, S., Harnisch, F. (2015):
Coupling electric energy and biogas production in anaerobic digesters – impacts on the microbiome
RSC Advances 5 (40), 31329 - 31340
full text (doi) - Korth, B., Rosa, L.F.M., Harnisch, F., Picioreanu, C. (2015):
A framework for modeling electroactive microbial biofilms performing direct electron transfer
Bioelectrochemistry 106 , 194 - 206
full text (doi) - Krohn, S., Engelmann, C., Raatz, P., Hoffmeister, A., Böhlig, A., Zeller, K., Böhm, S., Chatzinotas, A., Berg, T. (2015):
Duodenal microbiota is not the origin for bacterial translocation in liver cirrhosis
J. Hepatol. 62 (Suppl. 2), S372
full text (doi) - Krueger, M.C., Harms, H., Schlosser, D. (2015):
Prospects for microbiological solutions to environmental pollution with plastics
Appl. Microbiol. Biotechnol. 99 (1), 8857 - 8874
full text (doi) - Krueger, M.C., Hofmann, U., Moeder, M., Schlosser, D. (2015):
Potential of wood-rotting fungi to attack polystyrene sulfonate and its depolymerisation by Gloeophyllum trabeum via hydroquinone-driven Fenton chemistry
PLOS One 10 (7), e0131773
full text (doi) - Kurteva-Yaneva, N., Zahn, M., Weichler, M.-T., Starke, R., Harms, H., Müller, R.H., Sträter, N., Rohwerder, T. (2015):
Structural basis of the stereospecificity of bacterial B12-dependent 2-hydroxyisobutyryl-CoA mutase
J. Biol. Chem. 290 , 9727 - 9737
full text (doi) - Leite, A.F., Janke, L., Harms, H., Zang, J.W., Fonseca-Zang, W.A., Stinner, W., Nikolausz, M. (2015):
Assessment of the variations in characteristics and methane potential of major waste products from the Brazilian bioethanol industry along an operating season
Energy Fuels 29 (7), 4022 - 4029
full text (doi) - Leite, A.F., Janke, L., Lv, Z., Harms, H., Richnow, H.-H., Nikolausz, M. (2015):
Improved monitoring of semi-continuous anaerobic digestion of sugarcane waste: effects of increasing organic loading rate on methanogenic community dynamics
Int. J. Mol. Sci. 16 (10), 23210 - 23226
full text (doi) - Lindmeyer, M., Jahn, M., Vorpahl, C., Müller, S., Schmid, A., Bühler, B. (2015):
Variability in subpopulation formation propagates into biocatalytic variability of engineered Pseudomonas putida strains
Front. Microbiol. 6 , art. 1042
full text (doi) - Lucas, R., Kuchenbuch, A., Fetzer, I., Harms, H., Kleinsteuber, S. (2015):
Long-term monitoring reveals stable and remarkably similar microbial communities in parallel full-scale biogas reactors digesting energy crops
FEMS Microbiol. Ecol. 91 (3), fiv004
full text (doi) - Martínez-Lavanchy, P.M., Chen, Z., Lünsmann, V., Marin-Cevada, V., Vilchez-Vargas, R., Pieper, D.H., Reiche, N., Kappelmeyer, U., Imparato, V., Junca, H., Nijenhuis, I., Müller, J.A., Kuschk, P., Heipieper, H.J. (2015):
Microbial toluene removal in hypoxic model constructed wetlands occurs predominantly via the ring monooxygenation pathway
Appl. Environ. Microb. 81 (18), 6241 - 6252
full text (doi) - Maskow, T., Paufler, S. (2015):
What does calorimetry and thermodynamics of living cells tell us?
Methods 76 , 3 - 10
full text (doi) - Melzer, S., Winter, G., Jäger, K., Hübschmann, T., Hause, G., Syrowatka, F., Harms, H., Tárnok, A., Müller, S. (2015):
Cytometric patterns reveal growth states of Shewanella putrefaciens
Microb. Biotechnol. 8 (3), 379 - 391
full text (doi) - Otto, B., Beuchel, C., Liers, C., Reisser, W., Harms, H., Schlosser, D. (2015):
Laccase-like enzyme activities from chlorophycean green algae with potential for bioconversion of phenolic pollutants
FEMS Microbiol. Lett. 362 (11), fnv072
full text (doi) - Pfeiffer, M., Batbayar, G., Hofmann, J., Siegfried, K., Karthe, D., Hahn-Tomer, S. (2015):
Investigating arsenic (As) occurrence and sources in ground, surface, waste and drinking water in northern Mongolia
Environ. Earth Sci. 73 (2), 649 - 662
full text (doi) - Popp, D., Schrader, S., Kleinsteuber, S., Harms, H., Sträuber, H. (2015):
Biogas production from coumarin-rich plants—inhibition by coumarin and recovery by adaptation of the bacterial community
FEMS Microbiol. Ecol. 91 (9), fiv103
full text (doi) - Porsch, K., Wirth, B., Tóth, E.M., Schattenberg, F., Nikolausz, M. (2015):
Characterization of wheat straw-degrading anaerobic alkali-tolerant mixed cultures from soda lake sediments by molecular and cultivation techniques
Microb. Biotechnol. 8 (5), 801 - 814
full text (doi) - Pous, N., Koch, C., Vilà-Rovira, A., Balaguer, M.D., Colprim, J., Mühlenberg, J., Müller, S., Harnisch, F., Puig, S. (2015):
Monitoring and engineering reactor microbiomes of denitrifying bioelectrochemical systems
RSC Advances 5 (84), 68326 - 68333
full text (doi) - Pradhan, A., Seena, S., Schlosser, D., Gerth, K., Helm, S., Dobritzsch, M., Krauss, G.-J., Dobritzsch, D., Pascoal, C., Cássio, F. (2015):
Fungi from metal-polluted streams may have high ability to cope with the oxidative stress induced by copper oxide nanoparticles
Environ. Toxicol. Chem. 34 (4), 923 - 930
full text (doi) - Przybylski, D., Rohwerder, T., Dilßner, C., Maskow, T., Harms, H., Müller, R.H. (2015):
Exploiting mixtures of H2, CO2, and O2 for improved production of methacrylate precursor 2-hydroxyisobutyric acid by engineered Cupriavidus necator strains
Appl. Microbiol. Biotechnol. 99 (5), 2131 - 2145
full text (doi) - Qin, J., Moustafa, A., Harms, H., El-Din, M.G., Wick, L.Y. (2015):
The power of power: electrokinetic control of PAH interactions with exfoliated graphite
J. Hazard. Mater. 288 , 25 - 33
full text (doi) - Qin, J., Sun, X., Liu, Y., Berthold, T., Harms, H., Wick, L.Y. (2015):
Electrokinetic control of bacterial deposition and transport
Environ. Sci. Technol. 49 (9), 5663 - 5671
full text (doi) - Richter, S., Fetzer, I., Thullner, M., Centler, F., Dittrich, P. (2015):
Towards rule-based metabolic databases: a requirement analysis based on KEGG
Int. J. Data Min. Bioinform. 13 (3), 289 - 319
full text (doi) - Rödiger, S., Burdukiewicz, M., Blagodatskikh, K., Jahn, M., Schierack, P. (2015):
R as an environment for the reproducible analysis of DNA amplification experiments
R Journal 7 (1), 127 - 150
full text (url) - Schkolnik, G., Schmidt, M., Mazza, M.G., Harnisch, F., Musat, N. (2015):
In situ analysis of a silver nanoparticle-precipitating Shewanella biofilm by surface enhanced confocal Raman microscopy
PLOS One 10 (12), e0145871
full text (doi) - Schröder, U., Harnisch, F., Angenent, L.T. (2015):
Microbial electrochemistry and technology: terminology and classification
Energy Environ. Sci. 8 (2), 513 - 519
full text (doi) - Schweigert, M., Herrmann, S., Miltner, A., Fester, T., Kästner, M. (2015):
Fate of ectomycorrhizal fungal biomass in a soil bioreactor system and its contribution to soil organic matter formation
Soil Biol. Biochem. 88 , 120 - 127
full text (doi) - Shamim, S., Rehman, A. (2015):
Antioxidative enzyme profiling and biosorption ability of Cupriavidus metallidurans CH34 and Pseudomonas putida mt2 under cadmium stress
J. Basic Microbiol. 55 (3), 374 - 381
full text (doi) - Shan, Y., Song, Y., Liu, Y., Liu, R., Du, J., Zeng, P. (2015):
Adsorption of berberine by polymeric resin H103: kinetics and thermodynamics
Environ. Earth Sci. 73 (9), 4989 - 4994
full text (doi) - Siegfried, K., Hahn-Tomer, S., Koelsch, A., Osterwalder, E., Mattusch, J., Stärk, H.-J., Meichtry, M., De Seta, E.G., Reina, F.D., Panigatti, C., Litter, M.I., Harms, H. (2015):
Introducing simple detection of bioavailable arsenic at Rafaela (Santa Fe Province, Argentina) using the ARSOlux biosensor
Int. J. Environ. Res. Public Health 12 (5), 5465 - 5482
full text (doi) - Simon, A., Bindschedler, S., Job, D., Wick, L.Y., Filippidou, S., Kooli, W.M., Verrecchia, E.P., Junier, P. (2015):
Exploiting the fungal highway: development of a novel tool for the in situ isolation of bacteria migrating along fungal mycelium
FEMS Microbiol. Ecol. 91 (11), fiv116
full text (doi) - Stasik, S., Wick, L.Y., Wendt-Potthoff, K. (2015):
Anaerobic BTEX degradation in oil sands tailings ponds: impact of labile organic carbon and sulfate-reducing bacteria
Chemosphere 138 , 133 - 139
full text (doi) - Steinbach, A., Schulz, S., Giebler, J., Schulz, S., Pronk, G.J., Kögel-Knabner, I., Harms, H., Wick, L.Y., Schloter, M. (2015):
Clay minerals and metal oxides strongly influence the structure of alkane-degrading microbial communities during soil maturation
ISME J. 9 (7), 1687 - 1691
full text (doi) - Wei, M., Harnisch, F., Vogt, C., Ahlheim, J., Neu, T.R., Richnow, H.H. (2015):
Harvesting electricity from benzene and ammonium-contaminated groundwater using a microbial fuel cell with an aerated cathode
RSC Advances 5 (7), 5321 - 5330
full text (doi) - Wei, M., Rakoczy, J., Vogt, C., Harnisch, F., Schumann, R., Richnow, H.H. (2015):
Enhancement and monitoring of pollutant removal in a constructed wetland by microbial electrochemical technology
Bioresour. Technol. 196 , 490 - 499
full text (doi) - Weichler, M.-T., Kurteva-Yaneva, N., Przybylski, D., Schuster, J., Müller, R.H., Harms, H., Rohwerder, T. (2015):
Thermophilic coenzyme B12-dependent acyl-coenzyme A (CoA) mutase from Kyrpidia tusciae DSM 2912 preferentially catalyzes isomerization of (R)-3-hydroxybutyryl- and 2-hydroxyisobutyryl-CoA
Appl. Environ. Microb. 81 (14), 4564 - 4572
full text (doi) - Witkowski, P.T., Kallies, R., Hoveka, J., Auste, B., Ithete, N.I., Šoltys, K., Szemes, T., Drosten, C., Preiser, W., Klempa, B., Mfune, J.K.E., Kruger, D.H. (2015):
Novel arenavirus isolates from Namaqua rock mice, Namibia, Southern Africa
Emerg. Infect. Dis. 21 (7), 1213 - 1216
full text (doi) - Zimmermann, M., Escrig, S., Hübschmann, T., Kirf, M.K., Brand, A., Inglis, R.F., Musat, N., Müller, S., Meibom, A., Ackermann, M., Schreiber, F. (2015):
Phenotypic heterogeneity in metabolic traits among single cells of a rare bacterial species in its natural environment quantified with a combination of flow cell sorting and NanoSIMS
Front. Microbiol. 6 , art. 243
full text (doi)
2014 (51)
- Banitz, T., Johst, K., Wick, L.Y., Schamfuß, S., Harms, H., Frank, K. (2014):
Corrigendum: Highways versus pipelines: contributions of two fungal transport mechanisms to efficient bioremediation (vol 5, pg 211, 2013)
Environ. Microbiol. Rep. 6 (4), 414 - 414
full text (doi) - Bosch, J., Lee, K.-Y., Hong, S.-F., Harnisch, F., Schröder, U., Meckenstock, R.U. (2014):
Metabolic efficiency of Geobacter sulfurreducens growing on anodes with different redox potentials
Curr. Microbiol. 68 (6), 763 - 768
full text (doi) - Bozinovski, D., Taubert, M., Kleinsteuber, S., Richnow, H.-H., von Bergen, M., Vogt, C., Seifert, J. (2014):
Metaproteogenomic analysis of a sulfate-reducing enrichment culture reveals genomic organization of key enzymes in the m-xylene degradation pathway and metabolic activity of proteobacteria
Syst. Appl. Microbiol. 37 (7), 488 - 501
full text (doi) - Brown, R.K., Harnisch, F., Wirth, S., Wahlandt, H., Dockhorn, T., Dichtl, N., Schröder, U. (2014):
Evaluating the effects of scaling up on the performance of bioelectrochemical systems using a technical scale microbial electrolysis cell
Bioresour. Technol. 163 , 206 - 213
full text (doi) - Bühligen, F., Lindner, P., Fetzer, I., Stahl, F., Scheper, T., Harms, H., Müller, S. (2014):
Analysis of aging in lager brewing yeast during serial repitching
J. Biotechnol. 187 , 60 - 70
full text (doi) - Cailleau, G., Mota, M., Bindschedler, S., Junier, P., Verrecchia, E.P. (2014):
Detection of active oxalate–carbonate pathway ecosystems in the Amazon Basin: Global implications of a natural potential C sink
Catena 116 , 132 - 141
full text (doi) - Dorer, C., Vogt, C., Kleinsteuber, S., Stams, A.J.M., Richnow, H.-H. (2014):
Compound-specific isotope analysis as a tool to characterize biodegradation of ethylbenzene
Environ. Sci. Technol. 48 (16), 9122 - 9132
full text (doi) - Fester, T., Giebler, J., Wick, L.Y., Schlosser, D., Kästner, M. (2014):
Plant–microbe interactions as drivers of ecosystem functions relevant for the biodegradation of organic contaminants
Curr. Opin. Biotechnol. 27 , 168 - 175
full text (doi) - Fester, T., Merbach, I., Schulz, E., Härtig, C. (2014):
Metabolic response of Medicago sativa to severe nutrient imbalances and disturbances under field conditions
J. Plant Nutr. Soil Sci. 177 (2), 245 - 259
full text (doi) - Gharasoo, M., Centler, F., Fetzer, I., Thullner, M. (2014):
How the chemotactic characteristics of bacteria can determine their population patterns
Soil Biol. Biochem. 69 , 346 - 358
full text (doi) - Giebler, J., Wick, L.Y., Harms, H., Chatzinotas, A. (2014):
Evaluating T-RFLP protocols to sensitively analyze the genetic diversity and community changes of soil alkane degrading bacteria
Eur. J. Soil Biol. 65 , 107 - 113
full text (doi) - Glaser, K., Kuppardt, A., Krohn, S., Heidtmann, A., Harms, H., Chatzinotas, A. (2014):
Primer pairs for the specific environmental detection and T-RFLP analysis of the ubiquitous flagellate taxa Chrysophyceae and Kinetoplastea
J. Microbiol. Methods 100 , 8 - 16
full text (doi) - Gros, J., Nabi, D., Würz, B., Wick, L.Y., Brussaard, C.P.D., Huisman, J., van der Meer, J.R., Reddy, C.M., Arey, J.S. (2014):
First day of an oil spill on the open sea: Early mass transfers of hydrocarbons to air and water
Environ. Sci. Technol. 48 (16), 9400 - 9411
full text (doi) - Harms, H., Junca, H. (2014):
Editorial overview: Environmental Biotechnology
Curr. Opin. Biotechnol. 27 , vii - ix
full text (doi) - Heße, F., Prykhodko, V., Attinger, S., Thullner, M. (2014):
Assessment of the impact of pore-scale mass-transfer restrictions on microbially-induced stable-isotope fractionation
Adv. Water Resour. 74 , 79 - 90
full text (doi) - Heße, F., Prykhodko, V., Attinger, S., Thullner, M. (2014):
Corrigendum to “Assessment of the impact of pore-scale mass-transfer restrictions on microbially-induced stable-isotope fractionation” [ADWR 74C (2014) 79–90]
Adv. Water Resour. 74 , 329
full text (doi) - Hoffmann, P., Held, C., Maskow, T., Sadowski, G. (2014):
A thermodynamic investigation of the glucose-6-phosphate isomerization
Biophys. Chem. 195 , 22 - 31
full text (doi) - Jahangiri, E., Reichelt, S., Thomas, I., Hausmann, K., Schlosser, D., Schulze, A. (2014):
Electron beam-induced immobilization of laccase on porous supports for waste water treatment applications
Molecules 19 (8), 11860 - 11882
full text (doi) - Jahn, M., Vorpahl, C., Türkowsky, D., Lindmeyer, M., Bühler, B., Harms, H., Müller, S. (2014):
Accurate determination of plasmid copy number of flow-sorted cells using droplet digital PCR
Anal. Chem. 86 (12), 5969 - 5976
full text (doi) - Jahn, M., Vorpahl, C., Türkowsky, D., Lindmeyer, M., Bühler, B., Harms, H., Müller, S. (2014):
Population heterogeneity in Pseudomonas putida analyzed on the single cell level using proteomics and digital PCR
New Biotech. 31 (Suppl.), S58 - S59
full text (doi) - Johnke, J., Cohen, Y., de Leeuw, M., Kushmaro, A., Jurkevitch, E., Chatzinotas, A. (2014):
Multiple micro-predators controlling bacterial communities in the environment
Curr. Opin. Biotechnol. 27 , 185 - 190
full text (doi) - Kallies, R., Kopp, A., Zirkel, F., Estrada, A., Gillespie, T.R., Drosten, C., Junglen, S. (2014):
Genetic characterization of Goutanap virus, a novel virus related to Negeviruses, Cileviruses and Higreviruses
Viruses 6 (11), 4346 - 4357
full text (doi) - Koch, C., Harms, H., Müller, S. (2014):
Dynamics in the microbial cytome — single cell analytics in natural systems
Curr. Opin. Biotechnol. 27 , 134 - 141
full text (doi) - Koch, C., Harnisch, F., Schröder, U., Müller, S. (2014):
Cytometric fingerprints: evaluation of new tools for analyzing microbial community dynamics
Front. Microbiol. 5 , art. 273
full text (doi) - Koch, C., Müller, S., Harms, H., Harnisch, F. (2014):
Microbiomes in bioenergy production: From analysis to management
Curr. Opin. Biotechnol. 27 , 65 - 72
full text (doi) - Koch, C., Popiel, D., Harnisch, F. (2014):
Functional redundancy of microbial anodes fed by domestic wastewater
ChemElectroChem 1 (11), 1923 - 1931
full text (doi) - Krohn, S., Böhm, S., Engelmann, C., Hartmann, J., Brodzinski, A., Chatzinotas, A., Zeller, K., Prywerek, D., Fetzer, I., Berg, A. (2014):
Application of qualitative and quantitative real-time PCR, direct sequencing, and terminal restriction fragment length polymorphism analysis for detection and identification of polymicrobial 16S rRNA genes in ascites
J. Clin. Microbiol. 52 (5), 1754 - 1757
full text (doi) - Kuppardt, A., Kleinsteuber, S., Vogt, C., Lüders, T., Harms, H., Chatzinotas, A. (2014):
Phylogenetic and functional diversity within toluene-degrading, sulphate-reducing consortia enriched from a contaminated aquifer
Microb. Ecol. 68 (2), 222 - 234
full text (doi) - Lauterböck, B., Nikolausz, M., Lv, Z., Baumgartner, A., Liebhard, G., Fuchs, W. (2014):
Improvement of anaerobic digestion performance by continuous nitrogen removal with a membrane contactor treating a substrate rich in ammonia and sulfide
Bioresour. Technol. 158 , 209 - 216
full text (doi) - Lentendu, G., Wubet, T., Chatzinotas, A., Wilhelm, C., Buscot, F., Schlegel, M. (2014):
Effects of long term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
Mol. Ecol. 23 (13), 3341 - 3355
full text (doi) - Lieder, S., Jahn, M., Seifert, J., von Bergen, M., Müller, S., Takors, R. (2014):
Subpopulation-proteomics reveal growth rate, but not cell cycling, as a major impact on protein composition in Pseudomonas putida KT2440
AMB Express 4 , art. 71
full text (doi) - Lv, Z., Hu, M., Harms, H., Richnow, H.H., Liebetrau, J., Nikolausz, M. (2014):
Stable isotope composition of biogas allows early warning of complete process failure as a result of ammonia inhibition in anaerobic digesters
Bioresour. Technol. 167 , 251 - 259
full text (doi) - Lv, Z., Leite, A.F., Harms, H., Richnow, H.H., Liebetrau, J., Nikolausz, M. (2014):
Influences of the substrate feeding regime on methanogenic activity in biogas reactors approached by molecular and stable isotope methods
Anaerobe 29 , 91 - 99
full text (doi) - Maskow, T., Morais, F.M., Rosa, L.F.M., Qian, Y.G., Harnisch, F. (2014):
Insufficient oxygen diffusion leads to distortions of microbial growth parameters assessed by isothermal microcalorimetry
RSC Advances 4 (62), 32730 - 32737
full text (doi) - Morais, F.M., Buchholz, F., Hartmann, T., Lerchner, J., Neu, T.R., Kiesel, B., Harms, H., Maskow, T. (2014):
Chip-calorimetric monitoring of biofilm eradication with bacteriophages reveals an unexpected infection-related heat profile
J. Therm. Anal. Calorim. 115 (3), 2203 - 2210
full text (doi) - Otto, B., Schlosser, D. (2014):
First laccase in green algae: purification and characterization of an extracellular phenol oxidase from Tetracystis aeria
Planta 240 (6), 1225 - 1236
full text (doi) - Porsch, K., Rijal, M.L., Borch, T., Troyer, L.D., Behrens, S., Wehland, F., Appel, E., Kappler, A. (2014):
Impact of organic carbon and iron bioavailability on the magnetic susceptibility of soils
Geochim. Cosmochim. Acta 128 , 44 - 57
full text (doi) - Poser, A., Vogt, C., Knöller, K., Ahlheim, J., Weiss, H., Kleinsteuber, S., Richnow, H.-H. (2014):
Stable sulfur and oxygen isotope fractionation of anoxic sulfide oxidation by two different enzymatic pathways
Environ. Sci. Technol. 48 (16), 9094 - 9102
full text (doi) - Pous, N., Koch, C., Colprim, J., Puig, S., Harnisch, F. (2014):
Extracellular electron transfer of biocathodes: Revealing the potentials for nitrate and nitrite reduction of denitrifying microbiomes dominated by Thiobacillus sp.
Electrochem. Commun. 49 , 93 - 97
full text (doi) - Pradhan, A., Seena, S., Dobritzsch, D., Helm, S., Gerth, K., Dobritzsch, M., Krauss, G.-J., Schlosser, D., Pascoal, C., Cássio, F. (2014):
Physiological responses to nanoCuO in fungi from non-polluted and metal-polluted streams
Sci. Total Environ. 466–467 , 556 - 563
full text (doi) - Salthammer, T., Harnisch, F. (2014):
Die Chemie bei Breaking Bad: Entstehung einer Publikation und ihre Resonanz
Chem. unserer Zeit 48 (4), 242 - 243
full text (doi) - Schamfuß, S., Neu, T.R., Harms, H., Wick, L.Y. (2014):
A whole cell bioreporter approach to assess transport and bioavailability of organic contaminants in water unsaturated systems
J. Vis. Exp. 94 , e52334
full text (doi) - Schmidt, T., Ziganshin, A.M., Nikolausz, M., Scholwin, F., Nelles, M., Kleinsteuber, S., Pröter, J. (2014):
Effects of the reduction of the hydraulic retention time to 1.5 days at constant organic loading in CSTR, ASBR, and fixed-bed reactors - Performance and methanogenic community composition
Biomass Bioenerg. 69 , 241 - 248
full text (doi) - Shamim, S., Rehman, A. (2014):
Physicochemical surface properties of Cupriavidus metallidurans CH34 and Pseudomonas putida mt2 under cadmium stress
J. Basic Microbiol. 54 (4), 306 - 314
full text (doi) - Shamim, S., Rehman, A., Qazi, M.H. (2014):
Swimming, swarming, twitching, and chemotactic responses of Cupriavidus metallidurans CH34 and Pseudomonas putida mt2 in the presence of cadmium
Arch. Environ. Contam. Toxicol 66 (3), 407 - 414
full text (doi) - Shamim, S., Rehman, A., Qazi, M.H. (2014):
Cadmium-resistance mechanism in the bacteria Cupriavidus metallidurans CH34 and Pseudomonas putida mt2
Arch. Environ. Contam. Toxicol 67 (2), 149 - 157
full text (doi) - Singh, S., Harms, H., Schlosser, D. (2014):
Screening of ecologically diverse fungi for their potential to pretreat lignocellulosic bioenergy feedstock
Appl. Microbiol. Biotechnol. 98 (7), 3355 - 3370
full text (doi) - Wentrup, C., Wendeberg, A., Schimak, M., Borowski, C., Dubilier, N. (2014):
Forever competent: deep-sea bivalves are colonized by their chemosynthetic symbionts throughout their lifetime
Environ. Microbiol. 16 (12), 3699 - 3713
full text (doi) - Wetzel, K., Silva, G., Matczinski, U., Oehl, F., Fester, T. (2014):
Superior differentiation of arbuscular mycorrhizal fungal communities from till and no-till plots by morphological spore identification when compared to T-RFLP
Soil Biol. Biochem. 72 , 88 - 96
full text (doi) - Yoon, H., Leibeling, S., Zhang, C., Müller, R.H., Werth, C.J., Zilles, J.L. (2014):
Adaptation of Delftia acidovorans for degradation of 2,4-dichlorophenoxyacetate in a microfluidic porous medium
Biodegradation 25 (4), 595 - 604
full text (doi) - Zhang, N., Bashir, S., Qin, J., Schindelka, J., Fischer, A., Nijenhuis, I., Herrmann, H., Wick, L.Y., Richnow, H.H. (2014):
Compound specific stable isotope analysis (CSIA) to characterize transformation mechanisms of α-hexachlorocyclohexane
J. Hazard. Mater. 280 , 750 - 757
full text (doi)
2013 (54)
- Allan, E., Bossdorf, O., Dormann, C.F., Prati, D., Gossner, M.M., Tscharntke, T., Blüthgen, N., Bellach, M., Birkhofer, K., Boch, S., Böhm, S., Börschig, C., Chatzinotas, A., Christ, S., Daniel, R., Diekötter, T., Fischer, C., Friedl, T., Glaser, K., Hallmann, C., Hodac, L., Hölzel, N., Jung, K., Klein, A.M., Klaus, V.H., Kleinebecker, T., Krauss, J., Lange, M., Morris, E.K., Müller, J., Nacke, H., Pašalić, E., Rillig, M.C., Rothenwöhrer, C., Schall, P., Scherber, C., Schulze, W., Socher, S.A., Steckel, J., Steffan-Dewenter, I., Türke, M., Weiner, C.N., Werner, M., Westphal, C., Wolters, V., Wubet, T., Gockel, S., Gorke, M., Hemp, A., Renner, S.C., Schöning, I., Pfeiffer, S., König-Ries, B., Buscot, F., Linsenmair, K.E., Schulze, E.-D., Weisser, W.W., Fischer, M. (2013):
Interannual variation in land-use intensity enhances grassland multidiversity
Proc. Natl. Acad. Sci. U.S.A. 111 (1), 308 - 313
full text (doi) - Banitz, T., Johst, K., Wick, L.Y., Schamfuß, S., Harms, H., Frank, K. (2013):
Highways versus pipelines: contributions of two fungal transport mechanisms to efficient bioremediation
Environ. Microbiol. Rep. 5 (2), 211 - 218
full text (doi) - Beketov, M.A., Cedergreen, N., Wick, L.Y., Kattwinkel, M., Duquesne, S., Liess, M. (2013):
Sediment toxicity testing for prospective risk assessment - a new framework and how to establish it
Hum. Ecol. Risk Assess. 19 (1), 98 - 117
full text (doi) - Bravo, D., Cailleau, G., Bindschedler, S., Simon, A., Job, D., Verrecchia, E., Junier, P. (2013):
Isolation of oxalotrophic bacteria able to disperse on fungal mycelium
FEMS Microbiol. Lett. 348 (2), 157 - 166
full text (doi) - Bühligen, F., Rüdinger, P., Fetzer, I., Stahl, F., Scheper, T., Harms, H., Müller, S. (2013):
Sustainability of industrial yeast serial repitching practice studied by gene expression and correlation analysis
J. Biotechnol. 168 (4), 718 - 728
full text (doi) - Carmona-Martínez, A.A., Harnisch, F., Kuhlicke, U., Neu, T.R., Schröder, U. (2013):
Electron transfer and biofilm formation of Shewanella putrefaciens as function of anode potential
Bioelectrochemistry 93 , 23 - 29
full text (doi) - Centler, F., Heße, F., Thullner, M. (2013):
Estimating pathway-specific contributions to biodegradation in aquifers based on dual isotope analysis: theoretical analysis and reactive transport simulations
J. Contam. Hydrol. 152 , 97 - 116
full text (doi) - Chatzinotas, A., Schellenberger, S., Glaser, K., Kolb, S. (2013):
Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil
Appl. Environ. Microb. 79 (18), 5777 - 5781
full text (doi) - De Biase, C., Carminati, A., Oswald, S.E., Thullner, M. (2013):
Numerical modeling analysis of VOC removal processes in different aerobic vertical flow systems for groundwater remediation
J. Contam. Hydrol. 154 , 53 - 69
full text (doi) - Dennis, P.G., Harnisch, F., Yeoh, Y.K., Tyson, G.W., Rabaey, K. (2013):
Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system
Appl. Environ. Microb. 79 (13), 4008 - 4014
full text (doi) - Engelmann, C., Prywerek, D., Krohn, S., Boehlig, A., Herber, A., Chatzinotas, A., Fetzer, I., Boehm, S., Berg, T. (2013):
Bacterial DNA detection in ascites fluid in cirrhotic patients: molecular characterisation and clinical impact
Hepatology 58 (S1), 866A
full text (doi) - Fester, T. (2013):
Arbuscular mycorrhizal fungi in a wetland constructed for benzene-, methyl tert-butyl ether- and ammonia-contaminated groundwater bioremediation
Microb. Biotechnol. 6 (1), 80 - 84
full text (doi) - Fester, T., Fetzer, I., Härtig, C. (2013):
A core set of metabolite sink/source ratios indicative for plant organ productivity in Lotus japonicus
Planta 237 (1), 145 - 160
full text (doi) - Giebler, J., Wick, L.Y., Chatzinotas, A., Harms, H. (2013):
Alkane-degrading bacteria at the soil–litter interface: comparing isolates with T-RFLP-based community profiles
FEMS Microbiol. Ecol. 86 (1), 45 - 58
full text (doi) - Giebler, J., Wick, L.Y., Schloter, M., Harms, H., Chatzinotas, A. (2013):
Evaluating the assignment of alkB terminal restriction fragments and sequence types to distinct bacterial taxa
Appl. Environ. Microb. 79 (9), 3129 - 3132
full text (doi) - Gimkiewicz, C., Harnisch, F. (2013):
Waste water derived electroactive microbial biofilms: growth, maintenance, and basic characterization
J. Vis. Exp. 82 , e50800
full text (doi) - Harnisch, F., Blei, I., dos Santos, T.R., Möller, M., Nilges, P., Eilts, P., Schröder, U. (2013):
From the test-tube to the test-engine: assessing the suitability of prospective liquid biofuel compounds
RSC Advances 3 (25), 9594 - 9605
full text (doi) - Harnisch, F., Salthammer, T. (2013):
Die Chemie bei Breaking Bad: ein Chemiker als Serienprotagonist. Chemistry in Breaking Bad: a chemist starring a series
Chem. unserer Zeit 47 (4), 214 - 221
full text (doi) - Hartmann, T., Mühling, M., Wolf, A., Mariana, F., Maskow, T., Mertens, F., Neu, T.R., Lerchner, J. (2013):
A chip-calorimetric approach to the analysis of Ag nanoparticle caused inhibition and inactivation of beads-grown bacterial biofilms
J. Microbiol. Methods 95 (2), 129 - 137
full text (doi) - Jahn, M., Mölle, A., Rödel, G., Ostermann, K. (2013):
Temporal and spatial properties of a yeast multi-cellular amplification system based on signal molecule diffusion
Sensors 13 (11), 14511 - 14522
full text (doi) - Jahn, M., Seifert, J., von Bergen, M., Schmid, A., Bühler, B., Müller, S. (2013):
Subpopulation-proteomics in prokaryotic populations
Curr. Opin. Biotechnol. 24 (1), 79 - 87
full text (doi) - Koch, C., Fetzer, I., Harms, H., Müller, S. (2013):
CHIC—an automated approach for the detection of dynamic variations in complex microbial communities
Cytom. Part A 83 (6), 561 - 567
full text (doi) - Koch, C., Fetzer, I., Schmidt, T., Harms, H., Müller, S. (2013):
Monitoring functions in managed microbial systems by cytometric bar coding
Environ. Sci. Technol. 47 (3), 1753 - 1760
full text (doi) - Koch, C., Günther, S., Desta, A.F., Hübschmann, T., Müller, S. (2013):
Cytometric fingerprinting for analyzing microbial intracommunity structure variation and identifying subcommunity function
Nat. Protoc. 8 (1), 190 - 202
full text (doi) - Kruger, M.C., Bertin, P.N., Heipieper, H.J., Arsène-Ploetze, F. (2013):
Bacterial metabolism of environmental arsenic—mechanisms and biotechnological applications
Appl. Microbiol. Biotechnol. 97 (9), 3827 - 3841
full text (doi) - Leibeling, S., Maeß, M.B., Centler, F., Kleinsteuber, S., von Bergen, M., Thullner, M., Harms, H., Müller, R.H. (2013):
Posttranslational oxidative modification of (R)-2-(2,4-dichlorophenoxy)propionate/α-ketoglutarate-dependent dioxygenases (RdpA) leads to improved degradation of 2,4-dichlorophenoxyacetate (2,4-D)
Eng. Life Sci. 13 (3), 278 - 291
full text (doi) - Lentendu, G., Hübschmann, T., Müller, S., Dunker, S., Buscot, F., Wilhelm, C. (2013):
Recovery of soil unicellular eukaryotes: an efficiency and activity analysis on the single cell level
J. Microbiol. Methods 95 (3), 463 - 469
full text (doi) - Mariana, F., Buchholz, F., Lerchner, J., Neu, T.R., Harms, H., Maskow, T. (2013):
Chip-calorimetric monitoring of biofilm eradication with antibiotics provides mechanistic information
Int. J. Med. Microbiol. 303 (3), 158 - 165
full text (doi) - Maskow, T. (2013):
Calorimetry and biothermodynamics for biotechnology, medicine and environmental sciences: current status and advances
Eng. Life Sci. 13 (6), 508 - 509
full text (doi) - Mehlig, L., Petzold, M., Heder, C., Günther, S., Müller, S., Eschenhagen, M., Röske, I., Röske, K. (2013):
Biodiversity of polyphosphate accumulating bacteria in eight WWTPs with different modes of operation
J. Environ. Eng.-ASCE 139 (8), 1089 - 1098
full text (doi) - Möller, M., Harnisch, F., Schröder, U. (2013):
Hydrothermal liquefaction of cellulose in subcritical water—the role of crystallinity on the cellulose reactivity
RSC Advances 3 (27), 11035 - 11044
full text (doi) - Müller, S., Hiller, K. (2013):
From multi-omics to basic structures of biological systems
Curr. Opin. Biotechnol. 24 (1), 1 - 3
full text (doi) - Naether, D., Slawtschew, S., Stasik, S., Engel, M., Olzog, M., Wick, L.Y., Timmis, K.N., Heipieper, H.J. (2013):
Adaptation of hydrocarbonoclastic Alcanivorax borkumensis SK2 to alkanes and toxic organic compounds - a physiological and transcriptomic approach
Appl. Environ. Microb. 79 (14), 4282 - 4293
full text (doi) - Neumeyer, A., Hübschmann, T., Müller, S., Frunzke, J. (2013):
Monitoring of population dynamics of Corynebacterium glutamicum by multiparameter flow cytometry
Microb. Biotechnol. 6 (2), 157 - 167
full text (doi) - Nick, H.M., Raoof, A., Centler, F., Thullner, M., Regnier, P. (2013):
Reactive dispersive contaminant transport in coastal aquifers: Numerical simulation of a reactive Henry problem
J. Contam. Hydrol. 145 , 90 - 104
full text (doi) - Nikolausz, M., Walter, R.F.H., Sträuber, H., Liebetrau, J., Schmidt, T., Kleinsteuber, S., Bratfisch, F., Günther, U., Richnow, H.H. (2013):
Evaluation of stable isotope fingerprinting techniques for the assessment of the predominant methanogenic pathways in anaerobic digesters
Appl. Microbiol. Biotechnol. 97 (5), 2251 - 2262
full text (doi) - Paufler, S., Weichler, M.-T., Harms, H., Maskow, T. (2013):
Simple improvement of the sensitivity of a heat flux reaction calorimeter to monitor bioprocesses with weak heat production
Thermochim. Acta 569 , 71 - 77
full text (doi) - Perner, M., Petersen, J.M., Zielinski, F., Gennerich, H.H., Seifert, R. (2013):
Geochemical constraints on the diversity and activity of H2-oxidizing microorganisms in diffuse hydrothermal fluids from a basalt- and an ultramafic-hosted vent
FEMS Microbiol. Ecol. 85 (1), 210 - 210
full text (doi) - Pion, M., Bshary, R., Bindschedler, S., Filippidou, S., Wick, L.Y., Job, D., Junier, P. (2013):
Gains of bacterial flagellar motility in a fungal world
Appl. Environ. Microb. 79 (22), 6862 - 6867
full text (doi) - Pion, M., Spangenberg, J.E., Simon, A., Bindschedler, S., Flury, C., Chatelain, A., Bshary, R., Job, D., Junier, P. (2013):
Bacterial farming by the fungus Morchella crassipes
Proc. R. Soc. B-Biol. Sci. 280 (1773), art. 20132242
full text (doi) - Przybylski, D., Rohwerder, T., Harms, H., Yaneva, N., Müller, R.H. (2013):
Synthesis of the building block 2-hydroxyisobutyrate from fructose and butyrate by Cupriavidus necator H16
Appl. Microbiol. Biotechnol. 97 (20), 8875 - 8885
full text (doi) - Regestein, L., Maskow, T., Tack, A., Knabben, I., Wunderlich, M., Lerchner, J., Büchs, J. (2013):
Non-invasive online detection of microbial lysine formation in stirred tank bioreactors by using calorespirometry
Biotechnol. Bioeng. 110 (5), 1386 - 1395
full text (doi) - Regnier, P., Friedlingstein, P., Ciais, P., Mackenzie, F.T., Gruber, N., Janssens, I.A., Laruelle, G.G., Lauerwald, R., Luyssaert, S., Andersson, A.J., Arndt, S., Arnosti, C., Borges, A.V., Dale, A.W., Gallego-Sala, A., Goddéris, Y., Goossens, N., Hartmann, J., Heinze, C., Ilyina, T., Joos, F., LaRowe, D.E., Leifeld, J., Meysman, F.J.R., Munhoven, G., Raymond, P.A., Spahni, R., Suntharalingam, P., Thullner, M. (2013):
Anthropogenic perturbation of the carbon fluxes from land to ocean
Nat. Geosci. 6 (8), 597 - 606
full text (doi) - Ricken, B., Corvini, P.F.X., Cichocka, D., Parisi, M., Lenz, M., Wyss, D., Martínez-Lavanchy, P.M., Müller, J.A., Shahgaldian, P., Tulli, L.G., Kohler, H.-P.E., Kolvenbach, B.A. (2013):
ipso-hydroxylation and subsequent fragmentation: a novel microbial strategy to eliminate sulfonamide antibiotics
Appl. Environ. Microb. 79 (18), 5550 - 5558
full text (doi) - Rohwerder, T., Müller, R.H., Weichler, M.T., Schuster, J., Hübschmann, T., Müller, S., Harms, H. (2013):
Cultivation of Aquincola tertiaricarbonis L108 on the fuel oxygenate intermediate tert-butyl alcohol induces aerobic anoxygenic photosynthesis at extremely low feeding rates
Microbiology-(UK) 159 (10), 2180 - 2190
full text (doi) - Saleem, M., Fetzer, I., Harms, H., Chatzinotas, A. (2013):
Diversity of protists and bacteria determines predation performance and stability
ISME J. 7 (10), 1912 - 1921
full text (doi) - Schamfuß, S., Neu, T.R., van der Meer, J.R., Tecon, R., Harms, H., Wick, L.Y. (2013):
Impact of mycelia on the accessibility of fluorene to PAH-degrading bacteria
Environ. Sci. Technol. 47 (13), 6908 - 6915
full text (doi) - Schuster, J., Purswani, J., Breuer, U., Pozo, C., Harms, H., Müller, R.H., Rohwerder, T. (2013):
Constitutive expression of the cytochrome P450 EthABCD monooxygenase system enables degradation of synthetic dialkyl ethers in aquincola tertiaricarbonis L108
Appl. Environ. Microb. 79 (7), 2321 - 2327
full text (doi) - Thullner, M., Fischer, A., Richnow, H.-H., Wick, L.Y. (2013):
Influence of mass transfer on stable isotope fractionation
Appl. Microbiol. Biotechnol. 97 (2), 441 - 452
full text (doi) - Tischer, K., Kleinsteuber, S., Schleinitz, K.M., Fetzer, I., Spott, O., Stange, F., Lohse, U., Franz, J., Neumann, F., Gerling, S., Schmidt, C., Hasselwander, E., Harms, H., Wendeberg, A. (2013):
Microbial communities along biogeochemical gradients in a hydrocarbon-contaminated aquifer
Environ. Microbiol. 15 (9), 2603 - 2615
full text (doi) - Vogel, A., Fester, T., Eisenhauer, N., Scherer-Lorenzen, M., Schmid, B., Weisser, W.W., Weigelt, A. (2013):
Separating drought effects from roof artifacts on ecosystem processes in a grassland drought experiment
PLOS One 8 (8), e70997
full text (doi) - Wagner, A., Segler, L., Kleinsteuber, S., Sawers, G., Smidt, H., Lechner, U. (2013):
Regulation of reductive dehalogenase gene transcription in Dehalococcoides mccartyi
Philos. Trans. R. Soc. B-Biol. Sci. 368 (1616), 20120317
full text (doi) - Wentrup, C., Wendeberg, A., Huang, J.Y., Borowski, C., Dubilier, N. (2013):
Shift from widespread symbiont infection of host tissues to specific colonization of gills in juvenile deep-sea mussels
ISME J. 7 (6), 1244 - 1247
full text (doi) - Ziganshin, A.M., Liebetrau, J., Pröter, J., Kleinsteuber, S. (2013):
Microbial community structure and dynamics during anaerobic digestion of various agricultural waste materials
Appl. Microbiol. Biotechnol. 97 (11), 5161 - 5174
full text (doi)
2012 (38)
- Banitz, T., Johst, K., Wick, L.Y., Fetzer, I., Harms, H., Frank, K. (2012):
The relevance of conditional dispersal for bacterial colony growth and biodegradation
Microb. Ecol. 63 (2), 339 - 347
full text (doi) - Baumgarten, T., Sperling, S., Seifert, J., von Bergen, M., Steiniger, F., Wick, L.Y., Heipieper, H.J. (2012):
Membrane vesicle formation as a multiple-stress response mechanism enhances Pseudomonas putida DOT-T1E cell surface hydrophobicity and biofilm formation
Appl. Environ. Microb. 78 (17), 6217 - 6224
full text (doi) - Baumgarten, T., Vazquez, J.R., Bastisch, C., Veron, W., Feuilloley, M.G.J., Nietzsche, S., Wick, L.Y., Heipieper, H.J. (2012):
Alkanols and chlorophenols cause different physiological adaptive responses on the level of cell surface properties and membrane vesicle formation in Pseudomonas putida DOT-T1E
Appl. Microbiol. Biotechnol. 93 (2), 837 - 845
full text (doi) - Buchholz, F., Lerchner, J., Mariana, F., Kuhlicke, U., Neu, T.R., Harms, H., Maskow, T. (2012):
Chip-calorimetry provides real time insights into the inactivation of biofilms by predatory bacteria
Biofouling 28 (3), 351 - 362
full text (doi) - Czekalski, N., Berthold, T., Caucci, S., Egli, A., Bürgmann, H. (2012):
Increased levels of multiresistant bacteria and resistance genes after wastewater treatment and their dissemination into Lake Geneva, Switzerland
Front. Microbiol. 3 , art. 106
full text (doi) - De Biase, C., Maier, U., Baeder-Bederski, O., Bayer, P., Oswald, S., Thullner, M. (2012):
Removal of volatile organic compounds in vertical flow filters: predictions from reactive transport modeling
Ground Water Monit. Remediat. 32 (2), 106 - 121
full text (doi) - Donose, B.C., Harnisch, F., Taran, E. (2012):
Electrochemically produced hydrogen bubbleprobes for gas evolution kinetics and force spectroscopy
Electrochem. Commun. 24 , 21 - 24
full text (doi) - Flach, K., Hilbrich, I., Schiffmann, A., Gärtner, U., Krüger, M., Leonhardt, M., Waschipky, H., Wick, L., Arendt, T., Holzer, M. (2012):
Tau oligomers impair artificial membrane integrity and cellular viability
J. Biol. Chem. 287 (52), 43223 - 43233
full text (doi) - Furuno, S., Foss, S., Wild, E., Jones, K.C., Semple, K.T., Harms, H., Wick, L.Y. (2012):
Mycelia promote active transport and spatial dispersion of polycyclic aromatic hydrocarbons
Environ. Sci. Technol. 46 (10), 5463 - 5470
full text (doi) - Furuno, S., Remer, R., Chatzinotas, A., Harms, H., Wick, L.Y. (2012):
Use of mycelia as paths for the isolation of contaminant-degrading bacteria from soil
Microb. Biotechnol. 5 (1), 142 - 148
full text (doi) - Gharasoo, M., Centler, F., Regnier, P., Harms, H., Thullner, M. (2012):
A reactive transport modeling approach to simulate biogeochemical processes in pore structures with pore-scale heterogeneities
Environ. Modell. Softw. 30 (1), 102 - 114
full text (doi) - Günther, S., Koch, C., Hübschmann, T., Röske, I., Müller, R., Bley, T., Harms, H., Müller, S. (2012):
Correlation of community dynamics and process parameters as a tool for the prediction of the stability of wastewater treatment
Environ. Sci. Technol. 46 (1), 84 - 92
full text (doi) - Hanzel, J., Thullner, M., Harms, H., Wick, L.Y. (2012):
Walking the tightrope of bioavailability: growth dynamics of PAH degraders on vapour-phase PAH
Microb. Biotechnol. 5 (1), 79 - 86
full text (doi) - Hommes, G., Gasser, C.A., Howald, C.B.C., Goers, R., Schlosser, D., Shahgaldian, P., Corvini, P.F.-X. (2012):
Production of a robust nanobiocatalyst for municipal wastewater treatment
Bioresour. Technol. 115 (July 2012), 8 - 15
full text (doi) - Jimenez-Sanchez, C., Wick, L.Y., Ortega-Calvo, J.-J. (2012):
Chemical effectors cause different motile behavior and deposition of bacteria in porous media
Environ. Sci. Technol. 46 (12), 6790 - 6797
full text (doi) - Junghanns, C., Neumann, J.F., Schlosser, D. (2012):
Application of the aquatic fungus Phoma sp. (DSM22425) in bioreactors for the treatment of textile dye model effluents
J. Chem. Technol. Biotechnol. 87 (9), 1276 - 1283
full text (doi) - Kalbacher, T., Delfs, J.-O., Shao, H., Wang, W., Walther, M., Samaniego, L., Schneider, C., Kumar, R., Musolff, A., Centler, F., Sun, F., Hildebrandt, A., Liedl, R., Borchardt, D., Krebs, P., Kolditz, O. (2012):
The IWAS-ToolBox: software coupling for an integrated water resources management
Environ. Earth Sci. 65 (5), 1367 - 1380
full text (doi) - Kleinsteuber, S., Schleinitz, K.M., Vogt, C. (2012):
Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers
Appl. Microbiol. Biotechnol. 94 (4), 851 - 873
full text (doi) - Krohn, S., Hartmann, J., Brodzinski, A., Chatzinotas, A., Böhm, S., Berg, T. (2012):
Identification of polybacterial 16S RRNA genes from ascitic fluids with T-RFLP analysis and direct sequencing
J. Hepatol. 56 (Suppl. 2), S266 - S266
full text (doi) - Libardi jr., N., Gern, R.M.M., Furlan, S.A., Schlosser, D. (2012):
Laccase production by the aquatic ascomycete Phoma sp. UHH 5-1-03 and the white rot basidiomycete Pleurotus ostreatus DSM 1833 during submerged cultivation on banana peels and enzyme applicability for the removal of endocrine-disrupting chemicals
Appl. Biochem. Biotechnol. 167 (5), 1144 - 1156
full text (doi) - Maskow, T., Wolf, K., Kunze, W., Enders, S., Harms, H. (2012):
Rapid analysis of bacterial contamination of tap water using isothermal calorimetry
Thermochim. Acta 543 , 273 - 280
full text (doi) - Müller, S., Hübschmann, T., Kleinsteuber, S., Vogt, C. (2012):
High resolution single cell analytics to follow microbial community dynamics in anaerobic ecosystems
Methods 57 (3), 338 - 349
full text (doi) - Regestein, L., Wolf, A., Schneider, H.-J., Maskow, T., Mertens, F., Büchs, J., Lerchner, J. (2012):
A chip calorimeter for the monitoring of conventional bioreactors at elevated cell concentrations
Thermochim. Acta 544 , 10 - 16
full text (doi) - Reinhold, A., Westermann, M., Seifert, J., von Bergen, M., Schubert, T., Diekert, G. (2012):
Impact of vitamin B12 on the formation of the tetrachloroethene reductive dehalogenase in Desulfitobacterium hafniense strain Y51
Appl. Environ. Microb. 78 (22), 8025 - 8032
full text (doi) - Rosell, M., Gonzalez-Olmos, R., Rohwerder, T., Rusevova, K., Georgi, A., Kopinke, F.-D., Richnow, H.H. (2012):
Critical evaluation of the 2D-CSIA scheme for distinguishing fuel oxygenate degradation reaction mechanisms
Environ. Sci. Technol. 46 (9), 4757 - 4766
full text (doi) - Saleem, M., Fetzer, I., Dormann, C.F., Harms, H., Chatzinotas, A. (2012):
Predator richness increases the effect of prey diversity on prey yield
Nat. Commun. 3 , art. 1305
full text (doi) - Schäfer, F., Schuster, J., Würz, B., Härtig, C., Harms, H., Müller, R.H., Rohwerder, T. (2012):
Synthesis of short-chain diols and unsaturated alcohols from secondary alcohol substrates by the Rieske nonheme mononuclear iron oxygenase MdpJ
Appl. Environ. Microb. 78 (17), 6280 - 6284
full text (doi) - Schulz, S., Giebler, J., Chatzinotas, A., Wick, L.Y., Fetzer, I., Welzl, G., Harms, H., Schloter, M. (2012):
Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments
ISME J. 6 (9), 1763 - 1774
full text (doi) - Schulz, S., Yuyunkina, T., Pagel, H., Wick, L.Y., Poll, C., Streck, T., Kandeler, E., Schloter, M. (2012):
The influence of the herbicide 2-methyl-4-chlorophenoxyacetic acid (MCPA) on the mineralization of litter-derived alkanes and the abundance of the alkane monooxygenase gene (alkB) in the detritusphere of Pisum sativum (L.)
Biol. Fert. Soils 48 (8), 933 - 940
full text (doi) - Schuster, J., Schäfer, F., Hübler, N., Brandt, A., Rosell, M., Härtig, C., Harms, H., Müller, R.H., Rohwerder, T. (2012):
Bacterial degradation of tert-amyl alcohol proceeds via hemiterpene 2-methyl-3-buten-2-ol by employing the tertiary alcohol desaturase function of the Rieske nonheme mononuclear iron oxygenase MdpJ
J. Bacteriol. 194 (5), 972 - 981
full text (doi) - Siegfried, K., Endes, C., Bhuiyan, A.F.M.K., Kuppardt, A., Mattusch, J., van der Meer, J.R., Chatzinotas, A., Harms, H. (2012):
Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria
Environ. Sci. Technol. 46 (6), 3281 - 3287
full text (doi) - Solé, M., Müller, I., Pecyna, M.J., Fetzer, I., Harms, H., Schlosser, D. (2012):
Differential regulation by organic compounds and heavy metals of multiple laccase genes in the aquatic hyphomycete Clavariopsis aquatica
Appl. Environ. Microb. 78 (13), 4732 - 4739
full text (doi) - Stolpovsky, K., Gharasoo, M., Thullner, M. (2012):
The impact of pore-size heterogeneities on the spatiotemporal variation of microbial metabolic activity in porous media
Soil Sci. 177 (2), 98 - 110
full text (doi) - Taubert, M., Vogt, C., Wubet, T., Kleinsteuber, S., Tarkka, M.T., Harms, H., Buscot, F., Richnow, H.-H., von Bergen, M., Seifert, J. (2012):
Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium
ISME J. 6 (12), 2291 - 2301
full text (doi) - Thullner, M., Centler, F., Richnow, H.-H., Fischer, A. (2012):
Quantification of organic pollutant degradation in contaminated aquifers using compound specific stable isotope analysis – Review of recent developments
Org. Geochem. 42 (12), 1440 - 1460
full text (doi) - Tischer, K., Zeder, M., Klug, R., Pernthaler, J., Schattenhofer, M., Harms, H., Wendeberg, A. (2012):
Fluorescence in situ hybridization (CARD-FISH) of microorganisms in hydrocarbon contaminated aquifer sediment samples
Syst. Appl. Microbiol. 35 (8), 526 - 532
full text (doi) - Wendeberg, A., Zielinski, F.U., Borowski, C., Dubilier, N. (2012):
Expression patterns of mRNAs for methanotrophy and thiotrophy in symbionts of the hydrothermal vent mussel Bathymodiolus puteoserpentis
ISME J. 6 (1), 104 - 112
full text (doi) - Yaneva, N., Schuster, J., Schäfer, F., Lede, V., Przybylski, D., Paproth, T., Harms, H., Müller, R.H., Rohwerder, T. (2012):
Bacterial acyl-CoA mutase specifically catalyzes coenzyme B12-dependent isomerization of 2-hydroxyisobutyryl-CoA and (S)-3-hydroxybutyryl-CoA
J. Biol. Chem. 287 (19), 15502 - 15511
full text (doi)
2011 (35)
- Banitz, T., Fetzer, I., Johst, K., Wick, L.Y., Harms, H., Frank, K. (2011):
Assessing biodegradation benefits from dispersal networks
Ecol. Model. 222 (14), 2552 - 2560
full text (doi) - Banitz, T., Wick, L.Y., Fetzer, I., Frank, K., Harms, H., Johst, K. (2011):
Dispersal networks for enhancing bacterial degradation in heterogeneous environments
Environ. Pollut. 159 (10), 2781 - 2788
full text (doi) - Centler, F., Fetzer, I., Thullner, M. (2011):
Modeling population patterns of chemotactic bacteria in homogenous porous media
J. Theor. Biol. 287 , 82 - 91
full text (doi) - Ciudad, G., Reyes, I., Azócar, L., Briones, R., Jorquera, M., Wick, L.Y., Navia, R. (2011):
Innovative approaches for effective selection of lipase-producing microorganisms as whole cell catalysts for biodiesel production
New Biotech. 28 (4), 375 - 381
full text (doi) - Ciudad, G., Reyes, I., Jorquera, M.A., Azócar, L., Wick, L.Y., Navia, R. (2011):
Novel three-phase bioreactor concept for fatty acid alkyl ester production using R. oryzae as whole cell catalyst
World J. Microbiol. Biotechnol. 27 (11), 2505 - 2512
full text (doi) - De Biase, C., Reger, D., Schmidt, A., Jechalke, S., Reiche, N., Martínez-Lavanchy, P.M., Rosell, M., van Afferden, M., Maier, U., Oswald, S.E., Thullner, M. (2011):
Treatment of volatile organic contaminants in a vertical flow filter: relevance of different removal processes
Ecol. Eng. 37 (9), 1292 - 1303
full text (doi) - Fester, T., Fetzer, I., Buchert, S., Lucas, R., Rillig, M., Härtig, C. (2011):
Towards a systemic metabolic signature of the arbuscular mycorrhizal interaction
Oecologia 167 (4), 913 - 924
full text (doi) - Fester, T., Sawers, R. (2011):
Progress and challenges in agricultural applications of arbuscular mycorrhizal fungi
Crit. Rev. Plant Sci. 30 (5), 459 - 470
full text (doi) - Girardi, C., Greve, J., Lamshöft, M., Fetzer, I., Miltner, A., Schäffer, A., Kästner, M. (2011):
Biodegradation of ciprofloxacin in water and soil and its effects on the microbial communities
J. Hazard. Mater. 198 , 22 - 30
full text (doi) - Gröbe, G., Ullrich, R., Pecyna, M.J., Kapturska, D., Friedrich, S., Hofrichter, M., Scheibner, K. (2011):
High-yield production of aromatic peroxygenase by the agaric fungus Marasmius rotula
AMB Express 1 , art. 31
full text (doi) - Hahn-Tomer, S. (2011):
ARSOlux® – Biosensor basierend auf Bioreporter-Bakterien zur Detektion von Arsen im Trinkwasser. It introduces itself ARSOlux (R) - Biosensor based on a bioreporter bacteria for the detection of arsenic in drinking water
Grundwasser 16 (2), 133 - 134
full text (doi) - Hanzel, J., Thullner, M., Harms, H., Wick, L.Y. (2011):
Microbial growth with vapor-phase substrate
Environ. Pollut. 159 (4), 858 - 864
full text (doi) - Harms, H., Schlosser, D., Wick, L.Y. (2011):
Untapped potential: exploiting fungi in bioremediation of hazardous chemicals
Nat. Rev. Microbiol. 9 (3), 177 - 192
full text (doi) - Harnisch, F., Koch, C., Patil, S.A., Hübschmann, T., Müller, S., Schröder, U. (2011):
Revealing the electrochemically driven selection in natural community derived microbial biofilms using flow-cytometry
Energy Environ. Sci. (4), 1265 - 1267
full text (doi) - Jechalke, S., Rosell, M., Martínez-Lavanchy, P.M., Pérez-Leiva, P., Rohwerder, T., Vogt, C., Richnow, H.H. (2011):
Linking low-level stable isotope fractionation to expression of the cytochrome P450 monooxygenase-encoding ethB gene for elucidation of methyl tert-butyl ether biodegradation in aerated treatment pond systems
Appl. Environ. Microb. 77 (3), 1086 - 1096
full text (doi) - Krauss, G.-J., Solé, M., Krauss, G., Schlosser, D., Wesenberg, D., Bärlocher, F. (2011):
Fungi in freshwaters: ecology, physiology and biochemical potential
FEMS Microbiol. Rev. 35 (4), 620 - 651
full text (doi) - Macherius, A., Kuschk, P., Haertig, C., Moeder, M., Shtemenko, N.I., Bayona, A.H., Heredia Guerrero, J.A., Gey, M. (2011):
Composition changes in the cuticular surface lipids of the helophytes Phragmites australis and Juncus effusus as result of pollutant exposure
Environ. Sci. Pollut. Res. 18 (5), 727 - 733
full text (doi) - Martínez-Lavanchy, P.M., Dohrmann, A.B., Imfeld, G., Trescher, K., Tebbe, C.C., Richnow, H.-H., Nijenhuis, I. (2011):
Detection of monochlorobenzene metabolizing bacteria under anoxic conditions by DNA-stable isotope probing
Biodegradation 22 (5), 973 - 982
full text (doi) - Maskow, T., Schubert, T., Wolf, A., Buchholz, F., Regestein, L., Buechs, J., Mertens, F., Harms, H., Lerchner, J. (2011):
Potentials and limitations of miniaturized calorimeters for bioprocess monitoring
Appl. Microbiol. Biotechnol. 92 (1), 55 - 66
full text (doi) - Oroszi, S., Jakob, T., Wilhelm, C., Harms, H., Maskow, T. (2011):
Photosynthetic energy conversion in the diatom Phaeodactylum tricornutum. Measuring by calorimetry, oxygen evolution and pulse-amplitude modulated fluorescence
J. Therm. Anal. Calorim. 104 (1), 223 - 231
full text (doi) - Patil, S.A., Harnisch, F., Koch, C., Hübschmann, T., Fetzer, I., Carmona-Martínez, A.A., Müller, S., Schröder, U. (2011):
Electroactive mixed culture derived biofilms in microbial bioelectrochemical systems: the role of pH on biofilm formation, performance and composition
Bioresour. Technol. 102 (20), 9683 - 9690
full text (doi) - Petersen, J.M., Zielinski, F.U., Pape, T., Seifert, R., Moraru, C., Amann, R., Hourdez, S., Girguis, P.R., Wankel, S.D., Barbe, V., Pelletier, E., Fink, D., Borowski, C., Bach, W., Dubilier, N. (2011):
Hydrogen is an energy source for hydrothermal vent symbioses
Nature 476 (7359), 176 - 180
full text (doi) - Rakoczy, J., Schleinitz, K.M., Müller, N., Richnow, H.H., Vogt, C. (2011):
Effects of hydrogen and acetate on benzene mineralisation under sulphate-reducing conditions
FEMS Microbiol. Ecol. 77 (2), 238 - 247
full text (doi) - Sander, S.G., Hunter, K.A., Harms, H., Wells, M. (2011):
Numerical approach to speciation and estimation of parameters used in modeling trace metal bioavailability
Environ. Sci. Technol. 45 (15), 6388 - 6395
full text (doi) - Schäfer, F., Muzica, L., Schuster, J., Treuter, N., Rosell, M., Harms, H., Müller, R.H., Rohwerder, T. (2011):
Formation of alkenes via degradation of tert-alkyl ethers and alcohols by Aquincola tertiaricarbonis L108 and Methylibium spp.
Appl. Environ. Microb. 77 (17), 5981 - 5987
full text (doi) - Schattenhofer, M., Wulf, J., Kostadinov, I., Glöckner, F.O., Zubkov, M.V., Fuchs, B.M. (2011):
Phylogenetic characterisation of picoplanktonic populations with high and low nucleic acid content in the North Atlantic Ocean
Syst. Appl. Microbiol. 34 (6), 470 - 475
full text (doi) - Schäwe, R., Fetzer, I., Tönniges, A., Härtig, C., Geyer, W., Harms, H., Chatzinotas, A. (2011):
Evaluation of FT-IR spectroscopy as a tool to quantify bacteria in binary mixed cultures
J. Microbiol. Methods 86 (2), 182 - 187
full text (doi) - Smith, K.E.C., Thullner, M., Wick, L.Y., Harms, H. (2011):
Dissolved organic carbon enhances the mass transfer of hydrophobic organic compounds from nonaqueous phase liquids (NAPLs) into the aqueous phase
Environ. Sci. Technol. 45 (20), 8741 - 8747
full text (doi) - Stolpovsky, K., Martínez-Lavanchy, P.M., Heipieper, H.J., van Cappellen, P., Thullner, M. (2011):
Incorporating dormancy in dynamic microbial community models
Ecol. Model. 222 (17), 3092 - 3102
full text (doi) - Trutnau, M., Petzold, M., Mehlig, L., Eschenhagen, M., Geipel, K., Müller, S., Bley, T., Röske, I. (2011):
Using a carbon-based ASM3 EAWAG Bio-P for modelling the enhanced biological phosphorus removal in anaerobic/aerobic activated sludge systems
Bioprocess. Biosyst. Eng. 34 (3), 287 - 295
full text (doi) - Valet, G., Endl, E., Müller, S. (2011):
20 years of the German Society for Cytometry: past and future concepts
Cytom. Part A 79A (11), 891 - 893
full text (doi) - van Afferden, M., Rahman, K.Z., Mosig, P., De Biase, C., Thullner, M., Oswalt, P., Müller, R.A. (2011):
Remediation of groundwater contaminated with MTBE and benzene: the potential of vertical-flow soil filter systems
Water Res. 45 (16), 5063 - 5074
full text (doi) - Vogt, C., Kleinsteuber, S., Richnow, H.H. (2011):
Anaerobic benzene degradation by bacteria
Microb. Biotechnol. 4 (6), 710 - 724
full text (doi) - Zielinski, F., Gennerich, H.H., Borowski, C., Wenzhöfer, F., Dubilier, N. (2011):
In situ measurements of hydrogen sulfide, oxygen, and temperature in diffuse fluids of an ultramafic-hosted hydrothermal vent field (Logatchev, 14°45'N, Mid-Atlantic Ridge): implications for chemosymbiotic bathymodiolin mussels
Geochem. Geophys. Geosyst. 12 (9), 1 - 21
full text (doi) - Ziganshin, A.M., Schmidt, T., Scholwin, F., Il'inskaya, O.N., Harms, H., Kleinsteuber, S. (2011):
Bacteria and archaea involved in anaerobic digestion of distillers grains with solubles
Appl. Microbiol. Biotechnol. 89 (6), 2039 - 2052
full text (doi)
2010 (50)
- Bombach, P., Chatzinotas, A., Neu, T.R., Kästner, M., Lueders, T., Vogt, C. (2010):
Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques
FEMS Microbiol. Ecol. 71 (2), 237 - 246
full text (doi) - Buchholz, F., Harms, H., Maskow, T. (2010):
Biofilm research using calorimetry - a marriage made in heaven?
Biotechnol. J. 5 (12), 1339 - 1350
full text (doi) - Buchholz, F., Wolf, A., Lerchner, J., Mertens, F., Harms, H., Maskow, T. (2010):
Chip calorimetry for fast and reliable evaluation of bactericidal and bacteriostatic treatments of biofilms
Antimicrob. Agents Chemother. 54 (1), 312 - 319
full text (doi) - Centler, F., Kaleta, C., Speroni di Fenizio, P., Dittrich, P. (2010):
A parallel algorithm to compute chemical organizations in biological networks
Bioinformatics 26 (14), 1788 - 1789
full text (doi) - Centler, F., Shao, H., De Biase, C., Park, C.-H., Regnier, P., Kolditz, O., Thullner, M. (2010):
GeoSysBRNS-A flexible multidimensional reactive transport model for simulating biogeochemical subsurface processes
Comput. Geosci. 36 (3), 397 - 405
full text (doi) - Deepthike, H.U., Tecon, R., van Kooten, G.K., van der Meer, J.R., Harms, H., Wells, M., Short, J. (2010):
Response to comment on "Unlike PAHs from Exxon Valdez Crude Oil, PAHs from Gulf of Alaska Coals are not Readily Bioavailable"
Environ. Sci. Technol. 44 (6), 2212 - 2213
full text (doi) - Duldhardt, I., Gaebel, J., Chrzanowski, Ł., Nijenhuis, I., Schauer, F., Heipieper, H.J. (2010):
Adaptation of anaerobically grown Thauera aromatica, Geobacter sulfurreducens and Desulfococcus multivorans to organic solvents on the level of membrane fatty acid composition
Microb. Biotechnol. 3 (2), 201 - 209
full text (doi) - Findening, B.M., Chatzinotas, A., Boenigk, J. (2010):
Taxonomic and ecological characterization of stomatocysts of Spumella-like flagellates (Chrysophyceae)
J. Phycol. 46 (5), 868 - 881
full text (doi) - Foit, K., Chatzinotas, A., Liess, M. (2010):
Short-term disturbance of a grazer has long-term effects on bacterial communities-Relevance of trophic interactions for recovery from pesticide effects
Aquat. Toxicol. 99 (2), 205 - 211
full text (doi) - Furuno, S., Päzolt, K., Rabe, C., Neu, T.R., Harms, H., Wick, L.Y. (2010):
Fungal mycelia allow chemotactic dispersal of polycyclic aromatic hydrocarbon-degrading bacteria in water-unsaturated systems
Environ. Microbiol. 12 (6), 1391 - 1398
full text (doi) - Galliker, P., Hommes, G., Schlosser, D., Corvini, P.F.-X., Shahgaldian, P. (2010):
Laccase-modified silica nanoparticles efficiently catalyze the transformation of phenolic compounds
J. Colloid Interface Sci. 349 (1), 98 - 105
full text (doi) - Hanzel, J., Harms, H., Wick, L. (2010):
Bacterial chemotaxis along vapor-phase gradients of naphthalene
Environ. Sci. Technol. 44 (24), 9304 - 9310
full text (doi) - Herrmann, S., Kleinsteuber, S., Chatzinotas, A., Kuppardt, A., Lueders, T., Richnow, H.H., Vogt, C. (2010):
Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing
Environ. Microbiol. 12 (2), 401 - 411
full text (doi) - Hesse, F., Harms, H., Attinger, S., Thullner, M. (2010):
Linear exchange model for the description of mass transfer limited bioavailability at the pore scale
Environ. Sci. Technol. 44 (6), 2064 - 2071
full text (doi) - Hölscher, T., Breuer, U., Adrian, L., Harms, H., Maskow, T. (2010):
Production of the chiral compound (R)-3-Hydroxybutyrate by a genetically engineered methylotrophic bacterium
Appl. Environ. Microb. 76 (16), 5585 - 5591
full text (doi) - Imfeld, G., Aragonés, C.E., Fetzer, I., Mészáros, E., Zeiger, S., Nijenhuis, I., Nikolausz, M., Delerce, S., Richnow, H.H. (2010):
Characterization of microbial communities in the aqueous phase of a constructed model wetland treating 1,2-dichloroethene-contaminated groundwater
FEMS Microbiol. Ecol. 72 (1), 74 - 88
full text (doi) - Jehmlich, N., Fetzer, I., Seifert, J., Mattow, J., Vogt, C., Harms, H., Thiede, B., Richnow, H.H., von Bergen, M., Schmidt, F. (2010):
Decimal place slope: a fast and precise method for quantifying 13C incorporation levels for detecting the metabolic activity of microbial species
Mol. Cell. Proteomics 9 (6), 1221 - 1227
full text (doi) - Jehmlich, N., Hübschmann, T., Gesell Salazar, M., Völker, U., Benndorf, D., Müller, S., von Bergen, M., Schmidt, F. (2010):
Advanced tool for characterization of microbial cultures by combining cytomics and proteomics
Appl. Microbiol. Biotechnol. 88 (2), 575 - 584
full text (doi) - Jehmlich, N., Kleinsteuber, S., Vogt, C., Benndorf, D., Harms, H., Schmidt, F., von Bergen, M., Seifert, J. (2010):
Phylogenetic and proteomic analysis of an anaerobic toluene-degrading community
J. Appl. Microbiol. 109 (6), 1937 - 1945
full text (doi) - Jousset, A., Lara, E., Nikolausz, M., Harms, H., Chatzinotas, A. (2010):
Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil
Sci. Total Environ. 408 (5), 1221 - 1225
full text (doi) - Koschorreck, M., Geller, W., Neu, T.R., Kleinsteuber, S., Kunze, T., Trosiener, A., Wendt-Potthoff, K. (2010):
Structure and function of the microbial community in an in situ reactor to treat an acidic mine pit lake
FEMS Microbiol. Ecol. 73 (2), 385 - 395
full text (doi) - Kunapuli, U., Jahn, M.K., Lueders, T., Geyer, R., Heipieper, H.J., Meckenstock, R.U. (2010):
Desulfitobacterium aromaticivorans sp. nov. and Geobacter toluenoxydans sp. nov., iron-reducing bacteria capable of anaerobic degradation of monoaromatic hydrocarbons
Int. J. Syst. Evol. Microbiol. 60 (3), 686 - 695
full text (doi) - Kuppardt, A., Vetterlein, D., Harms, H., Chatzinotas, A. (2010):
Visualisation of gradients in arsenic concentrations around individual roots of Zea mays L. using agar-immobilized bioreporter bacteria
Plant Soil 329 (1-2), 295 - 306
full text (doi) - Kuppardt, S., Chatzinotas, A., Kästner, M. (2010):
Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater
Appl. Environ. Microb. 76 (24), 8222 - 8230
full text (doi) - Lammirato, C., Miltner, A., Wick, L.Y., Kästner, M. (2010):
Hydrolysis of cellobiose by β-glucosidase in the presence of soil minerals - Interactions at solid-liquid interfaces and effects on enzyme activity levels
Soil Biol. Biochem. 42 (12), 2203 - 2210
full text (doi) - Leibeling, S., Schmidt, F., Jehmlich, N., von Bergen, M., Müller, R.H., Harms, H. (2010):
Declining capacity of starving Delftia acidovorans MC1 to degrade phenoxypropionate herbicides correlates with oxidative modification of the initial enzyme
Environ. Sci. Technol. 44 (10), 3793 - 3799
full text (doi) - Leibeling, S., Taubert, M., Seifert, J., von Bergen, M., Harms, H., Müller, R.H. (2010):
Adaptation of the herbicide-degrading strain Delftia acidovorans MC1 through carbonylation of RdpA as key enzyme
J. Biotechnol. 150 (Suppl. 1), S262 - S263
full text (doi) - Mariana, F., Buchholz, F., Harms, H., Yong, Z., Yao, J., Maskow, T. (2010):
Isothermal titration calorimetry - A new method for the quantification of microbial degradation of trace pollutants
J. Microbiol. Methods 82 (1), 42 - 48
full text (doi) - Maskow, T., Kemp, R., Buchholz, F., Schubert, T., Kiesel, B., Harms, H. (2010):
What heat is telling us about microbial conversions in nature and technology: from chip- to megacalorimetry
Microb. Biotechnol. 3 (3), 269 - 284
full text (doi) - Maskow, T., Kiesel, B., Schubert, T., Yong, Z., Harms, H., Yao, J. (2010):
Calorimetric real time monitoring of lambda prophage induction
J. Virol. Methods 168 (1-2), 126 - 132
full text (doi) - Müller, S., Harms, H., Bley, T. (2010):
Origin and analysis of microbial population heterogeneity in bioprocesses
Curr. Opin. Biotechnol. 21 (1), 100 - 113
full text (doi) - Müller, S., Nebe von Caron, G. (2010):
Functional single-cell analyses: flow cytometry and cell sorting of microbial populations and communities
FEMS Microbiol. Rev. 34 (4), 544 - 587
full text (doi) - Nizzetto, L., Macleod, M., Borgå, K., Cabrerizo, A., Dachs, J., Di Guardo, A., Ghirardello, D., Hansen, K.M., Jarvis, A., Lindroth, A., Ludwig, B., Monteith, D., Perlinger, J.A., Scheringer, M., Schwendenmann, L., Semple, K.T., Wick, L.Y., Zhang, G., Jones, K.C. (2010):
Past, present, and future controls on levels of persistent organic pollutants in the global environment. Understanding the legacy of persistent organic pollutants requires studying the transition from primary to secondary source control
Environ. Sci. Technol. 44 (17), 6526 - 6531
full text (doi) - Otto, B., Schlosser, D., Reisser, W. (2010):
First description of a laccase-like enzyme in soil algae
Arch. Microbiol. 192 (9), 759 - 768
full text (doi) - Perner, M., Petersen, J.M., Zielinski, F.U., Gennerich, H.H., Seifert, R. (2010):
Geochemical constraints on the diversity and activity of H2-oxidizing microorganisms in diffuse hydrothermal fluids from a basalt- and an ultramafic-hosted vent
FEMS Microbiol. Ecol. 74 (1), 55 - 71
full text (doi) - Przybylski, D., Yaneva, N., Harms, H., Rohwerder, T., Müller, R.H. (2010):
Functional expression of 2-hydroxyisobutyryl-coa mutase in different E. coli derivatives
J. Biotechnol. 150 (Suppl. 1), S258
full text (doi) - Rohwerder, T., Müller, R.H. (2010):
Biosynthesis of 2-hydroxyisobutyric acid (2-HIBA) from renewable carbon
Microb. Cell. Fact. 9 , art. 13
full text (doi) - Rosell, M., Finsterbusch, S., Jechalke, S., Hübschmann, T., Vogt, C., Richnow, H.H. (2010):
Evaluation of the effects of low oxygen concentration on stable isotope fractionation during Aerobic MTBE biodegradation
Environ. Sci. Technol. 44 (1), 309 - 315
full text (doi) - Schäfer, F., Harms, H., Rohwerder, T., Müller, R.H. (2010):
Microbial synthesis of chiral alcohols using a novel monooxygenase
J. Biotechnol. 150 (Suppl. 1), S356
full text (doi) - Schleinitz, K.M., Vallaeys, T., Kleinsteuber, S. (2010):
Structural characterization of ISCR8, ISCR22, and ISCR23, subgroups of IS91-like insertion elements
Antimicrob. Agents Chemother. 54 (10), 4321 - 4328
full text (doi) - Sträuber, H., Hübschmann, T., Jehmlich, N., Schmidt, F., von Bergen, M., Harms, H., Müller, S. (2010):
NBDT (3-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino)-3-toluene) - A novel fluorescent dye for studying mechanisms of toluene uptake into vital bacteria
Cytom. Part A 77A (2), 113 - 120
full text (doi) - Sträuber, H., Müller, S. (2010):
Viability states of bacteria - specific mechanisms of selected probes
Cytom. Part A 77A (7), 623 - 634
full text (doi) - Thullner, M. (2010):
Response to "Comment on 'Comparison of bioclogging effects in saturated porous media within one- and two-dimensional flow systems' by Martin Thullner" by Philippe Baveye
Ecol. Eng. 36 (6), 837 - 838
full text (doi) - Thullner, M. (2010):
Comparison of bioclogging effects in saturated porous media within one- and two-dimensional flow systems
Ecol. Eng. 36 (2), 176 - 196
full text (doi) - Villanueva, L., del Campo, J., Guerrero, R., Geyer, R. (2010):
Intact phospholipid and quinone biomarkers to assess microbial diversity and redox state in microbial mats
Microb. Ecol. 60 (1), 226 - 238
full text (doi) - Wick, L.Y., Buchholz, F., Fetzer, I., Kleinsteuber, S., Härtig, C., Shi, L., Miltner, A., Harms, H., Pucci, G.N. (2010):
Responses of soil microbial communities to weak electric fields
Sci. Total Environ. 408 (20), 4886 - 4893
full text (doi) - Witzig, M., Boguhn, J., Kleinsteuber, S., Fetzer, I., Rodehutscord, M. (2010):
Influence of the maize silage to grass silage ratio and feed particle size of rations for ruminants on the community structure of ruminal Firmicutes in vitro
J. Appl. Microbiol. 109 (6), 1998 - 2010
full text (doi) - Witzig, M., Boguhn, J., Kleinsteuber, S., Fetzer, I., Rodehutscord, M. (2010):
Effect of the corn silage to grass silage ratio and feed particle size of diets for ruminants on the ruminal Bacteroides-Prevotella community in vitro
Anaerobe 16 (4), 412 - 419
full text (doi) - Zhang, C., Kang, Q., Wang, X., Zilles, J.L., Müller, R.H., Werth, C.J. (2010):
Effects of pore-scale heterogeneity and transverse mixing on bacterial growth in porous media
Environ. Sci. Technol. 44 (8), 3085 - 3092
full text (doi) - Zhou, Y., Yao, J., He, M., Choi, M.M.F., Feng, L., Chen, H., Wang, F., Chen, K., Zhuang, R., Maskow, T., Wang, G., Zaray, G. (2010):
Reduction in toxicity of arsenic(III) to Halobacillus sp. Y35 by kaolin and their related adsorption studies
J. Hazard. Mater. 176 (1-3), 487 - 494
full text (doi)
Index:
2023 (1)2022 (4)
2021 (4)
2020 (4)
2019 (4)
2018 (6)
2017 (3)
2016 (2)
2015 (3)
2014 (2)
2013 (6)
2012 (6)
2011 (4)
2010 (6)
You could use our publication index for further requests.
2023 (1)
- Lai, B. (2023):
Biophotovoltaik: mikrobielle Wasserstoffproduktion
Biospektrum 29 (1), 97 - 98
full text (doi)
2022 (4)
- Cárdenas-Rey, I., d. J. Bello Gonzalez, T., van der Goot, J., Ceccarelli, D., Bouwhuis, G., Schillemans, D., Jurburg, S.D., Veldman, K.T., de Visser, J.A.G.M., Brouwer, M.S.M. (2022):
Succession in the caecal microbiota of developing broilers colonised by extended-spectrum β-lactamase-producing Escherichia coli
Animal Microbiome 4 , art. 51
full text (doi) - Izabel-Shen, D., Li, S., Luo, T., Wang, J., Li, Y., Sun, Q., Yu, C.-P., Hu, A. (2022):
ISME Commun. 2 , art. 48
full text (doi) - Khurana, S., Heße, F., Hildebrandt, A., Thullner, M. (2022):
Should we worry about surficial dynamics when assessing nutrient cycling in the groundwater?
Front. Water 4 , art. 780297
full text (doi) - Li, S., Müller, S. (2022):
Stabile Langzeitkultivierung mikrobieller Gemeinschaften im loop-design
Biospektrum 28 (7), 705 - 708
full text (doi)
2021 (4)
- Dai, S., Korth, B., Vogt, C., Harnisch, F. (2021):
Microbial electrochemical oxidation of anaerobic digestion effluent from treating HTC process water
Front. Chem. Eng. 3 , art. 652445
full text (doi) - Schramm, E., Douhaire, C., Hübner, T. (2021):
Komposttoiletten als Ausgangspunkt für sichere Düngeprodukte. Composting toilets as starting point for safe fertilizer products
Wasser und Abfall 23 (10), 52 - 56
full text (doi) - Wick, L.Y. (2021):
Buchrezension zu: Umweltmikrobiologie (Walter Reineke und Michael Schlömann), 647 S., 335 Abb., Springer, 2020, 3. Aufl., SC, 44,99 €, ISBN: 9783662596548
Biospektrum 27 (2), 218
full text (doi) - Xiong, B.-J., Dusny, C., Wang, L., Appel, J., Lindstaedt, K., Schlosser, D., Harms, H., Wick, L. (2021):
Illuminate the hidden: in vivo mapping of microscale pH in the mycosphere using a novel whole-cell biosensor
ISME Commun. 1 , art. 75
full text (doi)
2020 (4)
- Guo, Y., Rosa, L.F.M., Müller, S., Harnisch, F. (2020):
Monitoring stratification of anode biofilms in bioelectrochemical laminar flow reactors using flow cytometry
Environ. Sci. Ecotechnol. 4 , art. 10062
full text (doi) - Heintz-Buschart, A., Guerra, C., Djukic, I., Cesarz, S., Chatzinotas, A., Patoine, G., Sikorski, J., Buscot, F., Küsel, K., Wegner, C.-E., Eisenhauer, N. (2020):
Microbial diversity-ecosystem function relationships across environmental gradients
Research Ideas and Outcomes 6 , e52217
full text (doi) - Joss, H., Muehe, E.M., Kappler, A. (2020):
Arsen in Grundwasser und Reis — Ursachen und Konsequenzen
Biospektrum 26 (6), 676 - 678
full text (doi) - Nikolausz, M., Kretzschmar, J. (2020):
Anaerobic digestion in the 21st century. Editorial
Bioengineering-Basel 7 , art. 157
full text (doi)
2019 (4)
- Harnisch, F. (2019):
Trendbericht Biochemie Teil 5: Biochemie unter Strom
Nachr. Chem. 67 (7-8), 64 - 66
full text (doi) - Harnisch, F., Kuchenbuch, A. (2019):
Mr. Elektron erobert die Biosynthese
Biospektrum 25 (2), 232 - 233
full text (doi) - Rodrigo Quejigo, J., Tejedor‑Sanz, S., Esteve‑Núñez, A., Harnisch, F. (2019):
Bed electrodes in microbial electrochemistry: setup, operation and characterization
ChemTexts 5 (1), art. 4
full text (doi) - Said, N., Chatzinotas, A., Schmidt, M. (2019):
Have an ion on it: the life-cycle of Bdellovibrio bacteriovorus viewed by helium-ion microscopy
Adv. Biosyst. 3 (1), art. 1800250
full text (doi)
2018 (6)
- Harnisch, F., Blombach, B., Buyel, J., Centler, F., Classen, T., Ebert, B.E., Eyer, C., Dohnt, K., Grünberger, A., Jandt, U., Jung, S., Kara, S., Regestein, L., Schmid, J., Tischler, D., Wierckx, N. (2018):
Revisionsbedürftig? Rechte und Pflichten akademischer Nachwuchsführungskräfte
Forschung & Lehre 25 (9), 788 - 789 - Harnisch, F., Urban, C. (2018):
Elektrobioraffinerien: Synergien zwischen elektrochemischen und mikrobiologischen Stoffumwandlungen nutzbar machen
Angew. Chem. 130 (32), 10168 - 10175
full text (doi) - Schlosser, D. (2018):
Sind konventionelle Kunststoffe mikrobiell abbaubar?
Biospektrum 24 (4), 375 - 378
full text (doi) - Strehlitz, B., Hunger, S., Kuchenbuch, A., Rosa, L.F.M., Harnisch, F. (2018):
Bakterien mit Strom füttern - Reaktoren für die Elektrobiotechnologie
ChemieXtra 8 (11), 19 - 21 - Strehlitz, B., Hunger, S., Kuchenbuch, A., Rosa, L.F.M., Harnisch, F. (2018):
Bakterien mit Strom füttern - Reaktoren für die Elektrobiotechnologie fit machen
GIT Labor-Fachzeitschrift 62 (3), 32 - 34
full text (url) - Worrich, A. (2018):
Eine starke Allianz
Umwelt Perspektiven (Dezember 2018), 20 - 21
2017 (3)
- Kallies, R., Kiesel, B., Zopfi, J., Wick, L.Y., Chatzinotas, A. (2017):
Complete genome sequence of Alteromonas virus vB_AspP-H4/4
Genome Announc. 5 (43), e00914-17
full text (doi) - Korth, B., Maskow, T., Harnisch, F. (2017):
Bioelektrokalorimetrie — der mikrobielle elektrochemische Peltier-Effekt
Biospektrum 23 (2), 220 - 222
full text (doi) - Schmid, J., Harnisch, F. (2017):
Das neue Wissenschaftszeitvertragsgesetz: Intention und Status quo!?
Biospektrum 23 (2), 119
full text (doi)
2016 (2)
- Harnisch, F., Rosenbaum, M.A., Greiner, A., Schröder, U. (2016):
Wie Mikroorganismen und Elektroden interagieren
Nachr. Chem. 64 (7-8), 732 - 737
full text (doi) - Kleinert, F., Kallies, R., Zweynert, A., Bierbaum, G. (2016):
Draft genome sequences of three northern German epidemic Staphylococcus aureus (ST247) strains containing multiple copies of IS256
Genome Announc. 4 (5), e00936-16
full text (doi)
2015 (3)
- Gimkiewicz, C., Hunger, S., Stang, C., Rosa, L.F.M., Zehnsdorf, A., Harnisch, F. (2015):
Bioreactors go electro – Bioreaktoren für Bioelektrotechnologie aufrüsten
Biospektrum 21 (4), 453 - 454
full text (doi) - Herke, Z., Maskow, T., Németh, Z.I. (2015):
A new method for detecting cross-inhibition effects in the environmental biocatalytic processes
BioTechnologia 96 (4), 279 - 284
full text (doi) - Sträuber, H., Bühligen, F., Kleinsteuber, S., Nikolausz, M., Porsch, K. (2015):
Improved anaerobic fermentation of wheat straw by alkaline pre-treatment and addition of alkali-tolerant microorganisms
Bioengineering-Basel 2 (2), 66 - 93
full text (doi)
2014 (2)
- Harnisch, F., Holtmann, D., Agler-Rosenbaum, M., Schröder, U. (2014):
Die Elektrobiotechnologie in Deutschland nimmt Fahrt auf
Biospektrum 20 (1), 93 - 94 - Kleinsteuber, S. (2014):
Editorial: Special Issue on "Microbial ecology of anaerobic digestion"
Bioengineering-Basel 1 (2), 111 - 112
full text (doi)
2013 (6)
- Jahn, M., Seifert, J., Hübschmann, T., von Bergen, M., Harms, H., Müller, S. (2013):
Comparison of preservation methods for bacterial cells in cytomics and proteomics
Journal of Integrated OMICS 3 (1), 25 - 33
full text (doi) - Koch, C., Brumme, B., Müller, S. (2013):
Mikrobielle Gemeinschaften im Visier der Durchflusszytometrie : Aktivitätsanalyse per Barcode
Biospektrum 19 (4), 396 - 400
full text (doi) - Narodoslawsky, M., Fiedler, D. (2013):
Energy, Sustainability and Society is celebrating two years of successful open-access publication. Editorial
Energy Sustain. Soc. 3 , art. 21
full text (doi) - Rosenbaum, M.A., Schröder, U., Harnisch, F. (2013):
Von der Abwasserreinigung zur Bioelektrotechnologie: Mikroben unter Strom
Biologie in unserer Zeit 43 (2), 96 - 103
full text (doi) - Ulbrich, K., Kornig, S., Lodemann, T., Eschenhagen, W., Bindel, L., Settele, J. (2013):
Klima und biologische Vielfalt - erforscht mit der Lernsoftware PRONAS
MNU, Math. Naturwiss. Unterr. 66 (3), 165 - 172 - Wick, L.Y., Harms, H. (2013):
Unterirdische Autobahnen: Pilze beim Schadstoffabbau
Biospektrum 19 (7), 720 - 722
full text (doi)
2012 (6)
- Hahn-Tomer, S. (2012):
Trinkwassertest mit Leuchtkraft
Die Welt (22.3.2012, Beil.) - Przybylski, D., Rohwerder, T., Harms, H., Müller, R.H. (2012):
Third-generation feed stocks for the clean and sustainable biotechnological production of bulk chemicals: synthesis of 2-hydroxyisobutyric acid
Energy Sustain. Soc. 2 , art. 11
full text (doi) - Pucci, G.N., Acuña, A.J., Wick, L., Pucci, O.H. (2012):
The use of electrobioremediation in hydrocarbon release and bioremediation
IJCR 4 (12), 451 - 454
full text (url) - Pucci, G.N., Acuña, A.J., Wick, L.Y., Pucci, O.H. (2012):
Electrobioremediation of Patagonian soils contaminated with hydrocarbons
Portugaliae Electrochimica Acta 30 (5), 361 - 370
full text (doi) - Sträuber, H., Schröder, M., Kleinsteuber, S. (2012):
Metabolic and microbial community dynamics during the hydrolytic and acidogenic fermentation in a leach-bed process
Energy Sustain. Soc. 2 , art. 13
full text (doi) - Ziganshin, A.M., Ziganshina, E.E., Kleinsteuber, S., Pröter, J., Ilinskaya, O.N. (2012):
Methanogenic community dynamics during anaerobic utilization of agricultural wastes
Acta Naturae 4 (4), 91 - 97
2011 (4)
- Goodman, V., Müller, A., Gröger-Arndt, H., Schlosser, D., Jehmlich, N., Treudler, R., Lehmann, I., Simon, J.-C., von Bergen, M. (2011):
Identification of spore specific allergen candidates from Penicillium chrysogenum
Journal of Integrated OMICS 1 (2), 272 - 279
full text (doi) - Kuppardt, A., Harms, H. (2011):
Bakterien zum Nachweis von Arsen in Trinkwasser
Biospektrum 17 (3), 284 - 286
full text (doi) - Narodoslawsky, M., Fiedler, D. (2011):
Editorial
Energy Sustain. Soc. 1 , art. 1
full text (doi) - Schlosser, D. (2011):
Pilze im Süßwasser und organische Umweltschadstoffe
Biospektrum 17 (7), 745 - 748
full text (doi)
2010 (6)
- Acuña, A.J., Pucci, G.N., Tonín, N., Wick, L., Pucci, O.H. (2010):
Electrobiorremediación. Una tecnología en dessarrollo para la recuperación de suelos contaminados con hidrocarburos
Ingeniería sanitaria y ambiental (105), 80 - 85 - Acuña, A.J., Tonín, N., Pucci, G.N., Wick, L., Pucci, O.H. (2010):
Electrobioremediation of an unsaturated soil contaminated with hydrocarbon after landfarming treatment
Portugaliae Electrochimica Acta 28 (4), 253 - 263
full text (doi) - Altenburger, R., Berns, A.E., Bittens, M., Brack, W., Burauel, P., Centler, F., Daus, B., Goss, K.-U., Harms, H., Kopinke, F.-D., Kühnel, D., Liess, M., Mackenzie, K., Miltner, A., Thullner, M., Wennrich, R., Wick, L.Y. (2010):
Chemicals in the environment (CITE). Report of the First Annual Conference of the Helmholtz research topic CITE
UWSF - Z. Umweltchem. Ökotox. 22 (4), 502 - 506
full text (doi) - Fetzer, I., Jehmlich, N., Vogt, C., Richnow, H.H., Seifert, J., Harms, H., von Bergen, M., Schmidt, F. (2010):
Calculation of partial isotope incorporation into peptides measured by mass spectrometry
BMC Res. Notes 3 , art. 178
full text (doi) - Wendeberg, A. (2010):
Fluorescence in situ hybridization for the identification of environmental microbes
Cold Spring Harbor Protocols 2010 (1), prot5366
full text (doi) - Zielinski, F.U., Dubilier, N. (2010):
Der Eukaryoten-Zellkern als ökologische Nische für Bakterien
Biospektrum 16 (1), 12 - 15
Index:
2022 (3)2021 (7)
2020 (9)
2019 (12)
2018 (15)
2017 (8)
2016 (9)
2015 (6)
2014 (11)
2013 (4)
2012 (10)
2011 (7)
2010 (13)
You could use our publication index for further requests.
2022 (3)
- Tischler, D., Wei, R., Harnisch, F. (2022):
Kapitel 3 Umweltbiotechnologie
Biotechnologie 2040 - Blick in die Zukunft einer Schlüsseltechnologie
DECHEMA, Frankfurt/Main, S. 53 - 65
full text (url) - Harnisch, F., Dohnt, K. (2022):
Kapitel 5 Elektrobiotechnologie
Biotechnologie 2040 - Blick in die Zukunft einer Schlüsseltechnologie
DECHEMA, Frankfurt/Main, S. 75 - 81
full text (url) - Assael, M.J., Maitland, G.C., Maskow, T., von Stockar, U., Wakeham, W.A., Will, S. (2022):
Commonly asked questions in thermodynamics, second edition
CRC Press / Taylor & Francis, Boca Raton, FL, 498 pp.
full text (doi)
2021 (7)
- Schlosser, D. (2021):
Cultivation of filamentous fungi for attack on synthetic polymers via biological Fenton chemistry
In: Weber, G., Bornscheuer, U.T., Wei, R. (eds.)
Enzymatic plastic degradation
Methods Enzymol. 648
Elsevier, p. 71 - 94
full text (doi) - Schlosser, D. (2021):
Past, presence and future of macrofungi applications: old friends, yet unknown strangers
In: Sridhar, K.R., Deshmukh, S.K. (eds.)
Advances in macrofungi: Industrial avenues and prospects
Progress in Mycological Research
CRC Press / Taylor & Francis, Boca Raton, FL, p. 1 - 8 - Sauer, J., Kolb, T., Pfeifer, P., Müller-Langer, F., Klemm, M., Jürgens, S., Peters, R., Hadrich, J., Schaadt, A., Harnisch, F., Zuberbühler, U. (2021):
Synthetische Kraftstoffe – Technologien, Prozessketten, Kohlenstoffquellen und Produkte
In: Szczepanski, P., Wunschick, F. (Hrsg.)
Forschung für den European Green Deal. Beiträge zur FVEE-Jahrestagung 2020 des ForschungsVerbunds Erneuerbare Energien 02. bis 04. November 2020, Online-Veranstaltung
FVEE-Themen 2020
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 43 - 47
full text (url) - Rago, L., Harnisch, F. (2021):
Electroautotrophs: feeding microbes with current for CO2 fixation
In: Kourist, R., Schmidt, S. (eds.)
The autotrophic biorefinery: raw materials from biotechnology
De Gruyter, Berlin ; Boston, p. 277 - 295
full text (doi) - Harnisch, F. (2021):
Chemikalien aus nichts als CO2 und elektrischer Energie? Mit Elektrobiotechnologie!
In: Bach, M., Bronsema, V., Englbrecht, C., Horstmann, C.F., Kahnert, M., Pietzsch, J. (Hrsg.)
BIO Deutschland Jahrbuch 2021/2022
Biotechnologie-Industrie-Organisation Deutschland e. V. (BIO Deutschland), Berlin, S. 54 - 55
full text (url) - Ebert, B., Birzle-Harder, B., Douhaire, C., Hübner, T., Schramm, E., Winker, M. (2021):
Kompostprodukte aus hygienisierten Fäkalien und Pflanzenkohle: Bedürfnisse der Nutzenden, Kooperationsmodelle und rechtliche Rahmenbedingungen
ISOE-Materialien Soziale Ökologie 65
Institut für Sozial-Ökologische Forschung, Frankfurt am Main, 48 S.
full text (url) - de Almeida, B.L.S., Queiroz, A.P., Avila Santos, A.P., Bonidia, R.P., Nunes da Rocha, U., Sipoli Sanches, D., de Carvalho, A.C.P.L.F. (2021):
Feature importance analysis of non-coding DNA/RNA sequences based on machine learning approaches
Advances in bioinformatics and computational biology. 14th Brazilian Symposium on Bioinformatics, BSB 2021, Virtual Event, November 22–26, 2021, Proceedings
Lect. Notes Comput. Sci. 13063
Springer, Berlin, Heidelberg, New York, p. 81 - 92
full text (doi)
2020 (9)
- Wick, L.Y. (2020):
Bioavailability as a microbial system property: lessons learned from biodegradation in the mycosphere
In: Ortega-Calvo, J.-J., Parsons, J.R. (eds.)
Bioavailability of organic chemicals in soil and sediment
Handbook of Environmental Chemistry Series 100
Springer, Berlin, Heidelberg, p. 267 - 289
full text (doi) - Schlosser, D. (2020):
Fungal attack on environmental pollutants representing poor microbial growth substrates
In: Nevalainen, H. (ed.)
Grand challenges in fungal biotechnology
Grand Challenges in Biology and Biotechnology
Springer International Publishing, Cham, p. 33 - 57
full text (doi) - Schlosser, D. (2020):
Biotechnologies for water treatment
In: Filip, J., Cajthaml, T., Najmanová, P., Černík, M., Zbořil, R. (eds.)
Advanced nano-bio technologies for water and soil treatment
Springer, Cham, p. 335 - 343
full text (doi) - Schlosser, D. (ed., 2020):
Laccases in bioremediation and waste valorisation
Microbiology Monographs 33
Springer, Berlin, Heidelberg, New York, 238 pp.
full text (doi) - Popp, D., Bonk, F., Becker, D., Kleinsteuber, S. (2020):
Nucleic acid based molecular biology tests
In: Liebetrau, J., Pfeiffer, D. (eds.)
Collection of methods for biogas. Methods to determine parameters for analysis purposes and parameters that describe processes in the biogas sector
Biomass energy use 7
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 232 - 244
full text (url) - Haghbeen, K., Schlosser, D. (2020):
Laccases in the context of potentially cooperating enzymes
In: Schlosser, D. (ed.)
Laccases in bioremediation and waste valorisation
Microbiology Monographs 33
Springer, Berlin, Heidelberg, New York, p. 79 - 114
full text (doi) - Fischer, A., Kuntze, K., Müller, L., Richnow, H.-H., Nikolausz, M. (2020):
Differentiation of methanogenic pathways in biogas plants using compound-specific stable isotope analysis
In: Liebetrau, J., Pfeiffer, D. (eds.)
Collection of methods for biogas. Methods to determine parameters for analysis purposes and parameters that describe processes in the biogas sector
Biomass energy use 7
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 268 - 278
full text (url) - Dzofou Ngoumelah, D., Harnisch, F., Kretzschmar, J. (2020):
Interaction between electroactive biofilms and anaerobic digestion effluents
3rd Doctoral Colloquium Bioenergy 17/18 September, 2020
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 64 - 65
full text (url) - Borim Corrêa, F., Eziuzor, S., Peng, S., Schultz, J., Saraiva, J.P., Adrian, L., Stadler, P., Kleinsteuber, S., Vogt, C., Nunes da Rocha, U. (2020):
Genome-resolved metagenomics sheds light on the anaerobic conversion of aromatics by complex communities
3rd Doctoral Colloquium Bioenergy 17/18 September, 2020
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 62 - 63
full text (url)
2019 (12)
- Wick, L.Y., Chatzinotas, A. (2019):
Capacity of ecosystems to degrade anthropogenic chemicals
In: Schröter, M., Bonn, A., Klotz, S., Seppelt, R., Baessler, C. (eds.)
Atlas of ecosystem services : drivers, risks, and societal responses
Springer International Publishing, Cham, p. 179 - 182
full text (doi) - Thullner, M., Regnier, P. (2019):
Microbial controls on the biogeochemical dynamics in the subsurface
In: Druhan, J., Tournassat, C. (eds.)
Reactive transport in natural and engineered systems
Rev. Mineral. Geochem. 85
Mineralogical Society of America (MSA) ; Geochemical Society , Chantilly, VA , p. 265 - 302
full text (doi) - Liebetrau, J., Sträuber, H., Kretzschmar, J., Denysenko, V., Nelles, M. (2019):
Anaerobic digestion
In: Wagemann, K., Tippkötter, N. (eds.)
Biorefineries
Adv. Biochem. Eng. Biotechnol. 166
Springer Nature, p. 281 - 299
full text (doi) - Krieg, T., Madjarov, J., Rosa, L.F.M., Enzmann, F., Harnisch, F., Holtmann, D., Rabaey, K. (2019):
Reactors for microbial electrobiotechnology
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 231 - 271
full text (doi) - Korth, B., Harnisch, F. (2019):
Modeling microbial electrosynthesis
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 273 - 325
full text (doi) - Holtmann, D., Harnisch, F. (2019):
Electrification of biotechnology: Quo vadis?
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 395 - 411
full text (doi) - Holtmann, D., Harnisch, F. (2019):
Die Bioelektrosynthese als essentieller Baustein der Bioökonomie. DECHEMA Positionspapier
DECHEMA, Frankfurt/Main, 19 S.
full text (url) - Harnisch, F., Holtmann, D. (2019):
Bioelectrosynthesis: Preface
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. V - VI - Harnisch, F., Holtmann, D. (2019):
Electrification of biotechnology: Status quo
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 1 - 14
full text (doi) - Harnisch, F., Holtmann, D. (eds., 2019):
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, IX, 420 pp.
full text (doi) - Harnisch, F., Bahnemann, J., Buyel, J., Centler, F., Classen, T., Dohnt, K., Ebert, B.E., Eyer, K., Grünberger, A., Jandt, U., Jung, S., Kara, S., Krujatz, F., Link, H., Regestein, L., Schmid, J., Tischler, D. (2019):
Rechte und Pflichten von akademischen Nachwuchsführungskräften. Stellungnahme des Zukunftsforums Biotechnologie der DECHEMA e.V.
DECHEMA, Frankfurt/Main, 15 S.
full text (url) - Druhan, J.L., Winnick, M.J., Thullner, M. (2019):
Stable isotope fractionation by transport and transformation
In: Druhan, J., Tournassat, C. (eds.)
Reactive transport in natural and engineered systems
Rev. Mineral. Geochem. 85
Mineralogical Society of America (MSA) ; Geochemical Society , Chantilly, VA , p. 239 - 264
full text (doi)
2018 (15)
- Worrich, A., Wick, L.Y., Banitz, T. (2018):
Ecology of contaminant biotransformation in the mycosphere: Role of transport processes
In: Gadd, G.M., Sariaslani, S. (eds.)
Advances in Applied Microbiology 104
Elsevier, Oxford, p. 93 - 133
full text (doi) - Worrich, A. (2018):
Eine starke Allianz
KlarText : Preis für Wissenschaftskommunikation : die Beiträge der Preisträger
Klaus Tschira Stiftung gGmbH, Heidelberg, S. 22 - 25
full text (url) - Wick, L.Y., Harms, H., Smith, K.E.C. (2018):
Microorganism-hydrophobic compound interactions
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 17 - 31
full text (doi) - Wick, L.Y., Harms, H. (2018):
The mycosphere as a hotspot for the biotransformation of contaminants in soil
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 315 - 324
full text (doi) - Thullner, M., Stefanakis, A.I., Dehestani, S. (2018):
Constructed wetlands treating water contaminated with organic hydrocarbons
In: Stefanakis, A.I. (ed.)
Constructed wetlands for industrial wastewater treatment
Wiley, Hoboken, NJ, p. 43 - 63
full text (doi) - Sträuber, H. (2018):
Mittelkettige Fettsäuren als Teilstrom des Biogasprozesses
DBFZ-Jahrestagung 2018: Energie & Stoffe aus Biomasse: Konkurrenten oder Partner? 19./20. September 2018
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, S. 156
full text (url) - Stinner, P.W., Deuker, A., Schmalfuß, T., Brock, C., Rensberg, N., Denysenko, V., Trainer, P., Möller, K., Zang, J., Janke, L., Leandro, W.M., Oehmichen, K., Popp, D., Daniel-Gromke, J. (2018):
Perennial and intercrop legumes as energy crops for biogas production
In: Meena, R.S., Das, A., Yadav, G.S., Lal, R. (eds.)
Legumes for soil health and sustainable management
Springer Singapore, Singapore, p. 139 - 171
full text (doi) - Schwarz, S., Zuberbühler, U., Schmidt, M., Kretzschmar, J., Friedrich, A., Schröer, B., Hebling, C., Calnan, S., Peters, R., Dittmeyer, R., Harnisch, F., Nagel, T. (2018):
Power-to-X: Technologien für Übermorgen?!
In: Baur, F., Fischedick, M. (Hrsg.)
Forschung für die Energiewende : die Gestaltung des Energiesystems ; Jahrestagung 2017 des ForschungsVerbunds Erneuerbare Energien, 8. und 9. November 2017, Umweltforum Berlin ; [Innovationen für die Energiewende, Beiträge zur FVEE-Jahrestagung 2017]
FVEE-Themen 2017
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 49 - 52
full text (url) - Robles, C., Nair, R.B., Kleinsteuber, S., Nikolausz, M., Sárvári Horváth, I. (2018):
Biogas production: microbiological aspects
In: Tabatabaei, M., Ghanavati, H. (eds.)
Biogas, biofuel and biorefinery technologies
Biofuel and Biorefinery Technologies Vol. 6
Springer, p. 163 - 198
full text (doi) - Liebetrau, J., Weinrich, S., Sträuber, H., Kretzschmar, J. (2018):
Anaerobic fermentation of organic material: biological processes and their control parameters
In: Meyers, R.A. (ed.)
Encyclopedia of sustainability science and technology
Springer, New York, p. 1 - 30
full text (doi) - Kleinsteuber, S. (2018):
Metagenomics of methanogenic communities in anaerobic digesters
In: Stams, A.J.M., Sousa, D.Z. (eds.)
Biogenesis of hydrocarbons
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham,
full text (doi) - Heipieper, H.J., Martínez, P.M. (2018):
Toxicity of hydrocarbons to microorganisms
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 335 - 344
full text (doi) - Harms, H., Wick, L.Y., Smith, K.E.C. (2018):
Matrix - hydrophobic compound interactions
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 33 - 45
full text (doi) - Harms, H., Smith, K.E.C., Wick, L.Y. (2018):
Problems of hydrophobicity/bioavailability: an introduction
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 3 - 15
full text (doi) - Bonk, F. (2018):
Microbial resources management in anaerobic digestion
Dissertation, Universität Leipzig, Fakultät für Lebenswissenschaften
130 pp.
2017 (8)
- Wick, L.Y., Otto, S., Holliger, C. (2017):
Two-phase cultivation techniques for hydrocarbon-degrading microorganisms
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Isolation and cultivation
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 107 - 117
full text (doi) - Thrän, D., Kleinsteuber, S., Liebetrau, J., Simon, S., Krautkremer, B., Baur, F., Guss, H. (2017):
Smart bioenergy concept - Aufgaben der Bioenergie im Energiesystem der Zukunft
In: Szczepanski, P., Wunschick, F., Martin, N. (Hrsg.)
Forschung für die Energiewende : die Gestaltung des Energiesystems. Beiträge zur Jahrestagung 2016 des ForschungsVerbunds Erneuerbare Energien, 2. und 3. November 2016, Umweltforum Berlin. FVEE-Themen
FVEE-Themen
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 76 - 80
full text (url) - Schlosser, D., Wick, L.Y. (2017):
Cultivation of hydrocarbon-degrading fungi
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Isolation and cultivation
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 269 - 281
full text (doi) - Müller-Langer, F., Dietrich, R.-U., van de Krol, R., Arnold, K., Harnisch, F. (2017):
Erneuerbare Kraftstoffe für Mobilität und Industrie
In: Szczepanski, P., Wunschick, F., Martin, N. (Hrsg.)
Forschung für die Energiewende : die Gestaltung des Energiesystems. Beiträge zur Jahrestagung 2016 des ForschungsVerbunds Erneuerbare Energien, 2. und 3. November 2016, Umweltforum Berlin. FVEE-Themen
FVEE-Themen
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 110 - 116
full text (url) - Harnisch, F., Koch, C. (2017):
Mit Strom von Zucker zum Abfall und zurück. Biobrennstoffzellen bis Bioelektrosynthese
In: Koesling, V., Spierling, R. (Hrsg.)
Alles Zucker! Nahrung - Werkstoff - Energie
bebra Verlag, Berlin, S. 215 - 225 - Harms, H., Wick, L.Y., Schlosser, D. (2017):
The fungal community in organically polluted systems
In: Dighton, J., White, J.F. (eds.)
The fungal community: Its organization and role in the ecosystem
Mycology Series 32
CRC Press / Taylor & Francis, Boca Raton, FL, p. 459 - 469 - Harms, H., Wick, L.Y. (2017):
Determining the tendency of microorganisms to interact with hydrocarbon phases
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Activities and phenotypes
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 43 - 53
full text (doi) - Braune, M., Daniel-Gromke, J., Sträuber, H. (2017):
Von der Biogasanlage zur modernen Bioraffinerie
11. Rostocker Bioenergieforum "Beitrag der Bioenergie zur Senkung der Treibhausgasemission" am 22. und 23. Juni 2017 an der Universität Rostock : Tagungsband
Schriftenreihe Umweltingenieurwesen 68
Universität Rostock, Agrar- und Umweltwissenschaftliche Fakultät, Rostock, S. 105 - 113
2016 (9)
- Stefanakis, A.I., Thullner, M. (2016):
Fate of phenolic compounds in constructed wetlands treating contaminated water
In: Ansari, A.A., Gill, S.S., Gill, R., Lanza, G.R., Newman, L. (eds.)
Phytoremediation : management of environmental contaminants. Vol. 4
Springer International Publishing, Cham, p. 311 - 325
full text (doi) - Siegfried, K., Hahn-Tomer, S., Heuser, S. (2016):
Waterbox & AQUA-CHECK—a newly developed package for drinking water supply and monitoring
In: Bhattacharya, P., Vahter, M., Jarsjö, J., Kumpiene, J., Ahmad, A., Sparrenbom, C., Jacks, G., Donselaar, M.E., Bundschuh, J., Naidu, R. (eds.)
Arsenic Research and Global Sustainability : Proceedings of the Sixth International Congress on Arsenic in the Environment (As2016), June 19-23, 2016, Stockholm, Sweden
CRC Press / Taylor & Francis, Boca Raton, FL, p. 245 - 246
full text (doi) - Schattenhofer, M., Hubalek, V., Wendeberg, A. (2016):
Identification of microorganisms in hydrocarbon-contaminated aquifer samples by fluorescence in situ hybridization (CARD-FISH)
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Ultrastructure and imaging
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 103 - 113
full text (doi) - Pröter, J., Lorenz, H., Sträuber, H. (2016):
Herausforderungen in der mikrobiellen biochemischen Konversion – welche Innovationen brauchen wir? Challenges for the microbial biochemical conversion – what kind of innovations do we need?
Mikroorganismen und Wirbellose – entscheidende Dienstleister für Landwirtschaft und Ernährung. Tagungsband eines Symposiums am 26./27. November 2015 in Berlin
Agrobiodiversität : Schriftenreihe des Informations- und Koordinationszentrums für Biologische Vielfalt 39
Bundesanstalt für Landwirtschaft und Ernährung , Bonn, S. 104 - 119
full text (url) - Popp, D. (2016):
Alternative substrates for biogas production: impact of plant secondary metabolites on the anaerobic digestion process
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
149 pp. - Otto, B. (2016):
Laccases from green algae: occurrence, characteristics, and possible functions and uses
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
79 pp. - Krueger, M.C. (2016):
Exploring capabilities and constraints of fungi for the oxidative decomposition of polystyrene and selected analogues
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
151 pp. - Koch, C., Aulenta, F., Schröder, U., Harnisch, F. (2016):
Microbial electrochemical technologies: industrial and environmental biotechnologies based on interactions of microorganisms with electrodes
Comprehensive biotechnology
Reference Module in Earth Systems and Environmental Sciences 6
Elsevier, Amsterdam, p. 545 - 563
full text (doi) - Dieckmann, C., Edelmann, W., Kaltschmitt, M., Liebetrau, J., Oldenburg, S., Ritzkowski, M., Scholwin, F., Sträuber, H., Weinrich, S. (2016):
Biogaserzeugung und –nutzung
In: Kaltschmitt, M., Hartmann, H., Hofbauer, H. (Hrsg.)
Energie aus Biomasse : Grundlagen, Techniken und Verfahren. 3., aktualisierte Aufl.
Springer, Berlin, Heidelberg, S. 1609 - 1635
full text (doi)
2015 (6)
- Zanaroli, G., Beck, H., Beimfohr, C., Cichocka, D., Corvini, P., Frascari, D., Hofmann, U., Kästner, M., Macek, T., Müller, J.A., Uhlik, O., Schlosser, D. (2015):
Analytical and monitoring methods
In: Hochstrat, R., Wintgens, T., Corvini, P. (eds.)
Immobilized biocatalysts for bioremediation of groundwater and wastewater
IWA Publishing, London, p. 15 - 48 - Siegfried, K., Koelsch, A., Osterwalder, E., Hahn-Tomer, S. (2015):
Advantages of biosensor water quality monitoring
In: Chalov, S.R., Karthe, D., Kasimov, N.S., Kappas, M. (eds.)
Water and environment in the Selenga-Baikal Basin : international research cooperation for an ecoregion of global relevance
Erdsicht : Einblicke in geographische und geoinformationstechnische Arbeitsweisen 23
Ibidem-Verlag, Stuttgart, p. 335 - 346 - Müller, S., Schleinitz, K. (2015):
Flow cytometry and microbial community fingerprinting
In: Wilkinson, M.G. (ed.)
Flow cytometry in microbiology: Technology and applications
Caister Academic Press, Norfolk, p. 77 - 89 - Jahn, M. (2015):
Characterization of population heterogeneity in a model biotechnological process using Pseudomonas putida
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
115 pp. - Hochstrat, R., Schlosser, D., Corvini, P., Wintgens, T. (2015):
Introduction
In: Hochstrat, R., Wintgens, T., Corvini, P. (eds.)
Immobilised biocatalysts for bioremediation of groundwater and wastewater
IWA Publishing, London, p. 1 - 14 - Ardao, I., Agathos, S.N., Ammann, E., Aluenta, F., Corvini, P., Frascari, D., Majone, M., Hochstrat, R., Hofmann, U., Kolvenbach, B., Schlosser, D., Zanaroli, G. (2015):
Immobilization techniques for biocatalysts
In: Hochstrat, R., Wintgens, T., Corvini, P. (eds.)
Immobilized biocatalysts for bioremediation of groundwater and wastewater
IWA Publishing, London, p. 49 - 69
2014 (11)
- Wick, L.Y., Qin, J. (2014):
Electrobioremediation of organic contaminants
In: Kreysa, G., Ota, K.-I., Savinell, R.F. (eds.)
Encyclopedia of Applied Electrochemistry, Vol. 1: A - E
Springer, New York, p. 392 - 397
full text (doi) - Solé, M., Schlosser, D. (2014):
Xenobiotics form human impacts
In: Krauss, G.-J., Nies, D.H. (eds.)
Ecological biochemistry : environmental and interspecies interactions
Wiley-VCH, Weinheim, p. 259 - 275 - Siegfried, K., Hahn-Tomer, S., Osterwalder, E., Pal, S., Mazumdar, A., Chakrabarti, R. (2014):
Demonstration of the genetically modified ARSOlux biosensor in Jyot Sujan, West Bengal, India
In: Litter, M.I., Nicolli, H.B., Meichtry, M., Quici, N., Bundschuh, J., Bhattacharya, P., Naidu, R. (eds.)
One Century of the Discovery of Arsenicosis in Latin America (1914-2014) As2014. Proceedings of the 5th International Congress on Arsenic in the Environment, May 11-16, 2014, Buenos Aires, Argentina
CRC Press, Boca Raton, FL, p. 867 - 869
full text (doi) - Schumann, J., Koch, C., Günther, S., Fetzer, I., Müller, S. (2014):
flowCHIC: Analyze flow cytometric data using histogram information
R package version 1.0.0
http://www.bioconductor.org/packages/release/bioc/html/flowCHIC.html
October 2014: 5 downloads (distinct IPs: ~500)
full text (url) - Schumann, J., Koch, C., Günther, S., Fetzer, I., Müller, S. (2014):
flowCyBar: Analyze flow cytometric data using gate information
R package version 1.2.0
http://www.bioconductor.org/packages/release/bioc/html/flowCyBar.html
October 2014: 1491 downloads (distinct IPs: December 2014: ~2000)
full text (url) - Schröder, U., dos Santos, T., Nilges, P., Harnisch, F. (2014):
„Electrofuels“ – Elektrochemie als Werkzeug für nachhaltige Kraftstoffsynthesen
In: Krahl, J., Munack, A., Bünger, J., Eilts, P. (Hrsg.)
Kraftstoffe für die Mobilität von morgen : 1. Tagung der Fuels Joint Research Group am 24. und 25. September 2014 in Braunschweig
Fuels Joint Research Group - Interdisziplinäre Kraftstoffforschung für die Mobilität der Zukunft 10
Cuvillier, Göttingen, S. 25 - 26 - Schlosser, D., Krauss, G.-J. (2014):
Sensing of pollutant effects and bioremediation
In: Krauss, G.-J., Nies, D.H. (eds.)
Ecological biochemistry : environmental and interspecies interactions
Wiley-VCH, Weinheim, p. 333 - 340 - Morais, F.M., Buchholz, F., Maskow, T. (2014):
Chip calorimetry for evaluation of biofilm treatment with biocides, antibiotics, and biological agents
In: Donelli, G. (ed.)
Microbial biofilms: methods and protocols
Methods in Molecular Biology 1147
Springer Nature, p. 267 - 275
full text (doi) - Hahn-Tomer, S., Siegfried, K., Chatzinotas, A., Kuppardt, A., Harms, H. (2014):
ARSOlux—arsenic biosensor based on bioreporter bacteria
In: Litter, M.I., Nicolli, H.B., Meichtry, M., Quici, N., Bundschuh, J., Bhattacharya, P., Naidu, R. (eds.)
One Century of the Discovery of Arsenicosis in Latin America (1914-2014) As2014. Proceedings of the 5th International Congress on Arsenic in the Environment, May 11-16, 2014, Buenos Aires, Argentina
CRC Press, Boca Raton, FL, p. 207 - 208
full text (doi) - Gharasoo, M. (2014):
Reactive transport simulations of microbial activity and biogeochemical transformations in porous environments: development and application of a pore-network model = Reactief transport simulaties van microbiele aktiviteit en biogeochemische transformaties in poreuze milieus: een porie-netwerkmodel ontwikkeling en toepassing
Dissertation
Utrecht Studies in Earth Sciences 59
Utrecht University, Utrecht, 103 pp. - Bühligen, F. (2014):
Functional properties of lager brewing yeast cells in industrial repitching processes
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
118 pp.
2013 (4)
- Vogt, J., Stahl, F., Scheper, T., Müller, S. (2013):
Isolation of intact RNA from sorted S. cerevisiae cells for differential gene expression analysis
In: Gupta, V.K., Tuohy, M., Ayyachamy, M., Turner, K.M., O’Donovan, A. (eds.)
Laboratory protocols in fungal biology : current methods in fungal biology
Fungal Biology
Springer, New York, p. 265 - 277
full text (doi) - Schröder, U., Harnisch, F. (2013):
From microbial bioelectrocatalysis to microbial bioelectrochemical systems
In: Alkire, R.C., Kolb, D.M., Lipkowski, J., Kibler, L. (eds.)
Electrocatalysis : Theoretical Foundations and Model Experiments
Advances in Electrochemical Sciences and Engineering 14
Wiley-VCH, p. 137 - 162 - Koch, C. (2013):
Monitoring microbial community dynamics with flow cytometry
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
127 pp. - Giebler, J. (2013):
Processes driving the structure and function of alkane degrading bacterial communities at soil biogeochemical interfaces
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
100, IX pp.
2012 (10)
- Zielinski, F.U., Dubilier, N. (2012):
Der Eukaryoten-Zellkern als ökologische Nische für Bakterien
In: Jahn, D. (Hrsg.)
Zellbiologie und Mikrobiologie : das Beste aus BIOspektrum
Springer Spektrum, Berlin, Heidelberg, S. 114 - 116 - Wick, L.Y., Liess, M., Wendt-Potthoff, K., Schattenhofer, M. (2012):
The Helmholtz-Alberta Initiative: UFZ contributions to sustainable oil sands tailings water management
1st UFZ Energy Days 2012: 4-5 April 2012 ; book of abstracts
UFZ-Bericht 6/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, p. 51 - Wells, M. (2012):
Polycyclic aromatic hydrocarbon (PAH) sensitive bacterial biosensors in environmental health
In: Preedy, V.R., Patel, V.B. (eds.)
Biosensors and environmental health
Science Publishers, Boca Raton, FL, p. 170 - 190 - Singh, S., Schlosser, D. (2012):
Fungal pre-treatment of lignocellulosic feedstock to improve biogas production
1st UFZ Energy Days 2012: 4-5 April 2012 ; book of abstracts
UFZ-Bericht 6/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, p. 9 - Maskow, T., Paufler, S., Sträuber, H., Kleinsteuber, S. (2012):
The potential of calorespirometry for control and analysis of biogas processes
1st UFZ Energy Days 2012: 4-5 April 2012 ; book of abstracts
UFZ-Bericht 6/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, p. 8 - Kopinke, F.-D., Harms, H. (2012):
BuildMoNa's fourth year - a principal investigator's view. Different perspectives on the same matter
BuildMoNa : graduate school Building with Molecules and Nano-objects. Annual report 2011
Universität Leipzig, Leipzig, p. 88 - 89 - Hanzel, J. (2012):
Impact of vapor-phase contaminants on microbial growth and chemotaxis
Dissertation, Universität Leipzig
PhD Dissertation 4/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, 102 pp.
full text (url) - De Biase, C., Maier, U., Oswald, S., Thullner, M. (2012):
Reactive transport simulation of volatile organic compound removal in vertical flow soil filters
ModelCare 2011: Models – Repositories of Knowledge. 8th International Conference on Calibration and Reliability in Groundwater Modeling, 18-22 September 2011, Helmholtz Centre for Environmental Research – UFZ, Leipzig, Germany - Book of Abstracts
p. 62 - Baarfuss, R., Blum, N., Conrads, C., Flecker, J., Huber Brösamle, A., Köster, R., Strobel, K., Wick, L.Y. (Hrsg., 2012):
Wirksames Management in der Wissenschaft : die eigene Arbeitsgruppe erfolgreich führen
Campus, Frankfurt/Main, 176 S. - Aurich, A., Specht, R., Müller, R.A., Stottmeister, U., Yovkova, V., Otto, C., Holz, M., Barth, G., Heretsch, P., Thomas, F.A., Sicker, D., Giannis, A. (2012):
Microbiologically produced carboxylic acids used as building blocks in organic synthesis
In: Wang, X., Chen, J., Quinn, P. (eds.)
Subcellular biochemistry, Volume 64; Reprogramming microbial metabolic pathways, Part 2
Springer, Berlin, Heidelberg, New York, p. 391 - 424
full text (doi)
2011 (7)
- Schattenhofer, M., Wendeberg, A. (2011):
Capturing microbial populations for environmental genomics
In: de Bruijn, F.J. (ed.)
Handbook of molecular microbial ecology I : metagenomics and complementary approaches
Wiley-Blackwell, Hoboken, NJ, p. 735 - 740 - Müller, S., Johnson, D.R. (2011):
Application of cytomics to separate natural microbial communities by their physiological properties
In: de Bruijn, F.J. (ed.)
Handbook of molecular microbial ecology I : metagenomics and complementary approaches
Wiley-Blackwell, Hoboken, NJ, p. 727 - 734 - Müller, S., Bley, T. (eds., 2011):
High resolution microbial single cell analytics
Adv. Biochem. Eng. Biotechnol. 124
Springer, Berlin, Heidelberg, 233 pp.
full text (doi) - Jacob, U., Thierry, A., Brose, U., Arntz, W.E., Berg, S., Brey, T., Fetzer, I., Jonsson, T., Mintenbeck, K., Möllmann, C., Petchey, O.L., Riede, J.O., Dunne, J.A. (2011):
The role of body size in complex food webs: a cold case
In: Belgrano, A., Reiss, J. (eds.)
The role of body size in multispecies systems
Advances in Ecological Research 45
Academic Press / Elsevier, London, p. 181 - 223
full text (doi) - Headley, T., Nivala, J., Olsson, L., Weichert, G., Kassa, K., van Afferden, M., Müller, R. (2011):
Removal of E. coli in subsurface flow constructed wetlands - effect of plants and design
Society of Wetland Scientists (SWS) and Wetland Pollutant Dynamics and Control (WETPOL) Conference, 3 - 8 July 2011, Prague (CZ) - Dattagupta, S., Zielinski, F. (2011):
Symbiosis
In: Reitner, J., Thiel, V., Kappler, A., Konhauser, K., Núñez, A.E., Reid, P., Zhang, X. (eds.)
Encyclopedia of geobiology
Encyclopedia of Earth Sciences Series 17
Springer, Dordrecht, p. 866 - 870
full text (doi) - Bombach, P., Hübschmann, T., Fetzer, I., Kleinsteuber, S., Geyer, R., Harms, H., Müller, S. (2011):
Resolution of natural microbial community dynamics by community fingerprinting, flow cytometry, and trend interpretation analysis
In: Müller, S., Bley, T. (eds.)
High resolution microbial single cell analytics
Adv. Biochem. Eng. Biotechnol. 124
Springer, Berlin, Heidelberg, p. 151 - 181
full text (doi)
2010 (13)
- Wick, L.Y., Furuno, S., Harms, H. (2010):
Fungi as transport vectors for contaminants and contaminant-degrading bacteria
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 8
Springer International Publishing, Cham, p. 1555 - 1561
full text (doi) - van Afferden, M., Rahman, K., Mosig, P., De Biase, C., Thullner, M., Oswald, S., Müller, R. (2010):
Development, technical design and cost estimation of a Vertical Flow Soil Filter System for the remediation of groundwater contaminated with MTBE and benzene
ConSoil 2010, 22 - 24 September 2010 Salzburg, Austria ; Proceedings 11th International UFZ-Deltares - TNO Conference on Management of Soil, Groundwater & Sediments. Theme: A: Restoration; ThS_A19: Special subjects
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, - Thullner, M., De Biase, C., Hanzel, J., Reger, D., Wick, L., Oswald, S., van Afferden, M., Schmidt, A., Reiche, N., Jechalke, S. (2010):
Assessing the fate of biodegradable volatile organic contaminants in unsaturated soil filter systems
EGU General Assembly 2010, Vienna, Austria, 02–07 May 2010
Geophysical Research Abstracts 12
European Geosciences Union (EGU), p. EGU2010-13748 - Pernthaler, A. (2010):
Identification of environmental microorganisms by fluorescence in situ hybridization
In: Timmis, K.N., McGenity, T., van der Meer, J.R., de Lorenzo, V. (eds.)
Experimental protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 3
Springer International Publishing, Cham, p. 4127 - 4135
full text (doi) - Müller, S. (2010):
Functional flow cytometry in environmental microbiology
In: Timmis, K.N., McGenity, T., van der Meer, J.R., de Lorenzo, V. (eds.)
Experimental protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 3
Springer International Publishing, Cham, p. 4103 - 4112
full text (doi) - Müller, S., Bley, T. (2010):
Flow cytometry
In: Flickinger, M.C. (ed.)
Encyclopedia of industrial biotechnology: bioprocess, bioseparation, and cell technology, Vol. 4
Wiley, Oxford, p. 2451 - 2467
full text (doi) - Kuppardt, A. (2010):
Improvement of bioreporter bacteria-based test systems for the analysis of arsenic in drinking water and the rhizosphere
Dissertation, Universität Leipzig
PhD Dissertation 2/2010
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, 87 pp.
full text (url) - Herrmann, S. (2010):
Molecular biological, physiological and isotope chemical analyses of BTEX (bio)degradation processes within a contaminated aquifer
Dissertation, TU Bergakademie Freiberg
PhD Dissertation 8/2010
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, 189 pp. - Heipieper, H.J., Martínez, P.M. (2010):
Toxicity of hydrocarbons to microorganisms
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 9
Springer International Publishing, Cham, p. 1565 - 1573
full text (doi) - Harms, H., Wick, L.Y. (2010):
Determining the tendency of microorganisms to interact with hydrocarbon phases
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Experimantal protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 2
Springer International Publishing, Cham, p. 3631 - 3639
full text (doi) - Harms, H., Wick, L.Y., Smith, K.E.C. (2010):
Matrix-hydrophobic compound interactions
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 7
Springer International Publishing, Cham, p. 1467 - 1478
full text (doi) - Harms, H., Smith, K.E.C., Wick, L.Y. (2010):
Microorganism-hydrophobic compound interactions
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 7
Springer International Publishing, Cham, p. 1479 - 1490
full text (doi) - Harms, H., Smith, K.E.C., Wick, L.Y. (2010):
Introduction: problems of hydrophobicity/bioavailability
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 7
Springer International Publishing, Cham, p. 1439 - 1450
full text (doi)