Publikationen
(Alle Publikationen ab 2010)
2023 (3)
- Álvarez-Barragán, J., Cravo-Laureau, C., Xiong, B., Wick, L.Y., Duran, R. (2023):
Marine fungi select and transport aerobic and anaerobic bacterial populations from polycyclic aromatic hydrocarbon-contaminated sediments
mBio
Volltext (DOI) - Khan, N., Muge, E., Mulaa, F.J., Wamalwa, B., von Bergen, M., Jehmlich, N., Wick, L.Y. (2023):
Mycelial nutrient transfer promotes bacterial co-metabolic organochlorine pesticide degradation in nutrient-deprived environments
ISME J.
Volltext (DOI) - Saraiva, J.P., Bartholomäus, A., Brizola Toscan, R., Baldrian, P., Nunes da Rocha, U. (2023):
Recovery of 197 Eukaryotic bins reveals major challenges for Eukaryote genome reconstruction from terrestrial metagenomes
Mol. Ecol. Resour.
Volltext (DOI)
2022 (1)
- Bates, K.A., Friesen, J., Loyau, A., Butler, H., Vredenburg, V.T., Laufer, J., Chatzinotas, A., Schmeller, D.S. (2022):
Environmental and anthropogenic factors shape the skin bacterial communities of a semi-arid amphibian species
Microb. Ecol.
Volltext (DOI)
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2021 (60)
2020 (59)
2019 (56)
2018 (64)
2017 (56)
2016 (52)
2015 (58)
2014 (51)
2013 (54)
2012 (38)
2011 (35)
2010 (50)
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2023 (20)
- Abdulkadir, N., Saraiva, J.P., Schattenberg, F., Toscan, R., Borim Corrêa, F., Harms, H., Müller, S., Nunes da Rocha, U. (2023):
Combining flow cytometry and metagenomics improves recovery of metagenome-assembled genomes in a cell culture from activated sludge
Microorganisms 11 (1), art. 175
Volltext (DOI) - Baleeiro, F.C.F., Raab, J., Kleinsteuber, S., Neumann, A., Sträuber, H. (2023):
Mixotrophic chain elongation with syngas and lactate as electron donors
Microb. Biotechnol. 16 (2), 322 - 336
Volltext (DOI) - Baleeiro, F.C.F., Varchmin, L., Kleinsteuber, S., Sträuber, H., Neumann, A. (2023):
Formate-induced CO tolerance and methanogenesis inhibition in fermentation of syngas and plant biomass for carboxylate production
Biotechnol. Biofuels Bioprod. 16 , art. 26
Volltext (DOI) - Becker, D., Popp, D., Bonk, F., Kleinsteuber, S., Harms, H., Centler, F. (2023):
Metagenomic analysis of anaerobic microbial communities degrading short-chain fatty acids as sole carbon sources
Microorganisms 11 (2), art. 420
Volltext (DOI) - Borer, B., Magnúsdóttir, S. (2023):
The media composition as a crucial element in high-throughput metabolic network reconstruction
Interface Focus 13 (2), art. 20220070
Volltext (DOI) - Dai, S., Harnisch, F., Bin-Hudari, M.S., Keller, N.-S., Vogt, C., Korth, B. (2023):
Improving the performance of bioelectrochemical sulfate removal by applying flow mode
Microb. Biotechnol. 16 (3), 595 - 604
Volltext (DOI) - Dzofou Ngoumelah, D., Harnisch, F., Sulheim, S., Heggeset, T.M.B., Aune, I.H., Wentzel, A., Kretzschmar, J. (2023):
A unified and simple medium for growing model methanogens
Front. Microbiol. 13 , art. 1046260
Volltext (DOI) - Dzofou Ngoumelah, D., Kuchenbuch, A., Harnisch, F., Kretzschmar, J. (2023):
Combining Geobacter spp. dominated biofilms and anaerobic digestion effluents─The effect of effluent composition and electrode potential on biofilm activity and stability
Environ. Sci. Technol. 57 (6), 2584 - 2594
Volltext (DOI) - Grosch Schroeder, B., İstanbullu, H.B., Schmidt, M., Logroño, W., Harms, H., Nikolausz, M. (2023):
Effect of alkaline and mechanical pretreatment of wheat straw on methanogenic enrichment cultures from Pachnoda marginata larva gut
Fermentation 9 (1), art. 60
Volltext (DOI) - Haenelt, S., Wang, G., Kasmanas, J.C., Musat, F., Richnow, H.H., Nunes da Rocha, U., Müller, J.A., Musat, N. (2023):
The fate of sulfonamide resistance genes and anthropogenic pollution marker intI1 after discharge of wastewater into a pristine river stream
Front. Microbiol. 14 , art. 1058350
Volltext (DOI) - Kang, B.R., Kim, J.J., Hong, J.-K., Schlosser, D., Lee, T.K. (2023):
Continuous operation of fungal wheel reactor based on solid-state fermentation for the removal of pharmaceutical and personal care products
J. Environ. Manage. 331 , art. 117316
Volltext (DOI) - Lai, B., Krömer, J., Aulenta, F., Wu, H., Nikel, P.I. (2023):
Exploiting synergies between microbial electrochemical technologies and synthetic biology
Microb. Biotechnol. 16 (3), 485 - 488
Volltext (DOI) - Magnúsdóttir, S., Saraiva, J.P., Bartholomäus, A., Soheili, M., Brizola Toscan, R., Zhang, J., Nunes da Rocha, U. (2023):
Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa
Front. Microbiol. 14 , art. 1037845
Volltext (DOI) - Reuben, R.C., Langer, D., Eisenhauer, N., Jurburg, S.D. (2023):
Universal drivers of cheese microbiomes
iScience 26 (1), art. 105744
Volltext (DOI) - Rosado, P.M., Cardoso, P.M., Rosado, J.G., Schultz, J., Nunes da Rocha, U., Keller-Costa, T., Peixoto, R.S. (2023):
Exploring the potential molecular mechanisms of interactions between a probiotic consortium and its coral host
mSystems 8 (1), e00921-22
Volltext (DOI) - Straessner, R., Nikolausz, M., Silve, A., Nazarova, N., Wuestner, R., Papachristou, I., Akaberi, S., Leber, K., Mueller, G., Frey, W. (2023):
Holistic exploitation of pulsed electric field (PEF)-treated and lipid extracted microalgae Auxenochlorella protothecoides, utilizing anaerobic digestion (AD)
Algal Res. 69 , art. 102950
Volltext (DOI) - Toepel, J., Karande, R., Klähn, S., Bühler, B. (2023):
Cyanobacteria as whole-cell factories: current status and future prospectives
Curr. Opin. Biotechnol. 80 , art. 102892
Volltext (DOI) - Veen, J., Jang, H., Raubenheimer, D., van Pinxteren, B.O.C.M., Kandza, V., Meirmans, P.G., van Dam, N.M., Dunker, S., Hoffmann, P., Worrich, A., Janmaat, K.R.L. (2023):
Development of embodied capital: diet composition, foraging skills, and botanical knowledge of forager children in the Congo Basin
Front. Ecol. Evol. 11 , art. 935987
Volltext (DOI) - Werner, K.A., Feyen, L., Hübner, T., Brüggemann, N., Prost, K., Grohmann, E. (2023):
Fate of horizontal-gene-transfer markers and beta-lactamase genes during thermophilic composting of human excreta
Microorganisms 11 (2), art. 308
Volltext (DOI) - Wolthuis, J.C., Magnúsdóttir, S., Stigter, E., Tang, Y.F., Jans, J., Gilbert, M., van der Hee, B., Langhout, P., Gerrits, W., Kies, A., de Ridder, J., van Mil, S. (2023):
Multi-country metabolic signature discovery for chicken health classification
Metabolomics 19 (2), art. 9
Volltext (DOI)
2022 (82)
- Abdollahi, M., Al Sbei, S., Rosenbaum, M.A., Harnisch, F. (2022):
The oxygen dilemma: The challenge of the anode reaction for microbial electrosynthesis from CO2
Front. Microbiol. 13 , art. 947550
Volltext (DOI) - Abramov, S.M., He, J., Wimmer, D., Muehe, E.M., Helle, T., Thorwarth, H., Kappler, A. (2022):
Thiourea leaching of gold from processed municipal solid waste incineration residues
J. Mater. Cycles Waste Manag. 24 (6), 2243 - 2254
Volltext (DOI) - Bachmann, M., Wensch-Dorendorf, M., Kuhnitzsch, C., Kleinsteuber, S., Popp, D., Thierbach, A., Martens, S.D., Steinhöfel, O., Zeyner, A. (2022):
Changes in composition and diversity of epiphytic microorganisms on field pea seeds, partial crop peas, and whole crop peas during maturation and ensiling with or without lactic acid bacteria inoculant
Microbiol. Spectr. 10 (4), e00953-22
Volltext (DOI) - Baleeiro, F.C.F., Kleinsteuber, S., Sträuber, H. (2022):
Recirculation of H2, CO2, and ethylene improves carbon fixation and carboxylate yields in anaerobic fermentation
ACS Sustain. Chem. Eng. 10 (13), 4073 - 4081
Volltext (DOI) - Bertê, R., Teixeira, G.M., de Oliveira, J.P., Nicoletto, M.L.A., da Silva, D.V., de Godoy, G.G., Sipoli Sanches, D., de Resende, J.T.V., de Padua Pereira, U., Nunes da Rocha, U., de Oliveira, A.G. (2022):
Genome mining reveals high biosynthetic potential of biocontrol agent Bacillus velezensis B.BV10
Genes 13 (11), art. 1984
Volltext (DOI) - Blombach, B., Grünberger, A., Centler, F., Wierckx, N., Schmid, J. (2022):
Exploiting unconventional prokaryotic hosts for industrial biotechnology
Trends Biotechnol. 40 (4), 385 - 397
Volltext (DOI) - Bonidia, R.P., Avila Santos, A.P., Almeida, B.L.S., Stadler, P.F., Nunes da Rocha, U., Sipoli Sanches, D., de Carvalho, A.C.P.L.F. (2022):
Information theory for biological sequence classification: A novel feature extraction technique based on Tsallis entropy
Entropy 24 (10), art. 1398
Volltext (DOI) - Bonidia, R.P., Avila Santos, A.P., de Almeida, B.L.S., Stadler, P.F., Nunes da Rocha, U., Sanches, D.S., de Carvalho, A.C.P.L.F. (2022):
BioAutoML: automated feature engineering and metalearning to predict noncoding RNAs in bacteria
Brief. Bioinform. 23 (4), bbac218
Volltext (DOI) - Bozan, M., Popp, D., Kallies, R., Nunes da Rocha, U., Klähn, S., Bühler, K. (2022):
Whole-genome sequence of the filamentous diazotrophic cyanobacterium Tolypothrix sp. PCC 7712 and its comparison with non-diazotrophic Tolypothrix sp. PCC 7601
Front. Microbiol. 13 , art. 1042437
Volltext (DOI) - Braune, M., Yuan, B., Sträuber, H., Mcdowall, S.C., Nitzsche, R., Gröngröft, A. (2022):
Corrigendum: A downstream processing cascade for separation of caproic and caprylic acid from maize silage-based fermentation broth
Front. Bioeng. Biotechnol. 10 , art. 1049451
Volltext (DOI) - Bruckmann, C., Müller, S., Höner zu Siederdissen, C. (2022):
Automatic, fast, hierarchical, and non-overlapping gating of flow cytometric data with flowEMMi v2
Comp. Struct. Biotechnol. J. 20 , 6473 - 6489
Volltext (DOI) - Bruckmann, C., Stadler, P.F., Hellmuth, M. (2022):
From modular decomposition trees to rooted median graphs
Discrete Appl. Math. 310 , 1 - 9
Volltext (DOI) - Chen, S.-C., Ji, J., Popp, D., Jaekel, U., Richnow, H.-H., Sievert, S.M., Musat, F. (2022):
Genome and proteome analyses show the gaseous alkane degrader Desulfosarcina sp. strainBuS5 as an extreme metabolic specialist
Environ. Microbiol. 24 (4), 1964 - 1976
Volltext (DOI) - Dai, S., Korth, B., Schwab, L., Aulenta, F., Vogt, C., Harnisch, F. (2022):
Deciphering the fate of sulfate in one- and two-chamber bioelectrochemical systems
Electrochim. Acta 408 , art. 139942
Volltext (DOI) - Duong, H.L., Paufler, S., Harms, H., Maskow, T., Schlosser, D. (2022):
Applicability and information value of biocalorimetry for the monitoring of fungal solid-state fermentation of lignocellulosic agricultural by-products
New Biotech. 66 , 97 - 106
Volltext (DOI) - Duong, H.L., Paufler, S., Harms, H., Schlosser, D., Maskow, T. (2022):
Fungal lignocellulose utilization strategies from a bioenergetic perspective: Quantification of related functional traits using biocalorimetry
Microorganisms 10 (8), art. 1675
Volltext (DOI) - Eziuzor, S.C., Borim Corrêa, F., Peng, S., Schultz, J., Kleinsteuber, S., Nunes da Rocha, U., Adrian, L., Vogt, C. (2022):
Structure and functional capacity of a benzene‐mineralizing, nitrate‐reducing microbial community
J. Appl. Microbiol. 132 (4), 2795 - 2811
Volltext (DOI) - Gharasoo, M., Elsner, M., van Cappellen, P., Thullner, M. (2022):
Pore-scale heterogeneities improve the degradation of a self-inhibiting substrate: Insights from reactive transport modeling
Environ. Sci. Technol. 56 (18), 13008 - 13018
Volltext (DOI) - Grosch Schroeder, B., Logroño, W., Nunes da Rocha, U., Harms, H., Nikolausz, M. (2022):
Enrichment of anaerobic microbial communities from midgut and hindgut of sun beetle larvae (Pachnoda marginata) on wheat straw: effect of inoculum preparation
Microorganisms 10 (4), art. 761
Volltext (DOI) - Hallama, M., Pekrun, C., Mayer-Gruner, P., Uksa, M., Abdullaeva, Y., Pilz, S., Schloter, M., Lambers, H., Kandeler, E. (2022):
The role of microbes in the increase of organic phosphorus availability in the rhizosheath of cover crops
Plant Soil 476 (1-2), 353 - 373
Volltext (DOI) - Hoffstadt, K., Krafft, S., Nikolausz, M., Kuperjans, I. (2022):
Power-to-methane – Design and optimization of two new bubble column reactors
Chem. Ing. Tech. 94 (9), 1323 - 1323
Volltext (DOI) - Izadi, P., Harnisch, F. (2022):
Microbial | electrochemical CO2 reduction: To integrate or not to integrate?
Joule 6 (5), 935 - 940
Volltext (DOI) - Izadi, P., Schröder, U. (2022):
What is the role of individual species within bidirectional electroactive microbial biofilms: A case study on Desulfarculus baarsii and Desulfurivibrio alkaliphilus
ChemElectroChem 9 (2), e202101116
Volltext (DOI) - Jadeja, N.B., Worrich, A. (2022):
From gut to mud: dissemination of antimicrobial resistance between animal and agricultural niches
Environ. Microbiol. 24 (8), 3290 - 3306
Volltext (DOI) - Jensen Pedersen, K., Haange, S.-B., Žížalová, K., Viehof, A., Clavel, T., Leniček, M., Engelmann, B., Wick, L.Y., Schaap, F.G., Jehmlich, N., Rolle-Kampczyk, U., von Bergen, M. (2022):
Eggerthella lenta DSM 2243 alleviates bile acid stress response in Clostridium ramosum and Anaerostipes caccae by transformation of bile acids
Microorganisms 10 (10), art. 2025
Volltext (DOI) - Jurburg, S.D., Buscot, F., Chatzinotas, A., Chaudhari, N.M., Clark, A.T., Garbowski, M., Grenié, M., Hom, E.F.Y., Karakoç, C., Marr, S., Neumann, S., Tarkka, M., van Dam, N.M., Weinhold, A., Heintz-Buschart, A. (2022):
The community ecology perspective of omics data
Microbiome 10 , art. 225
Volltext (DOI) - Jurburg, S.D., Eisenhauer, N., Buscot, F., Chatzinotas, A., Chaudhari, N.M., Heintz-Buschart, A., Kallies, R., Küsel, K., Litchman, E., Macdonald, C.A., Müller, S., Reuben, R.C., Nunes da Rocha, U., Panagiotou, G., Rillig, M.C., Singh, B.K. (2022):
Potential of microbiome-based solutions for agrifood systems
Nat. Food 3 (8), 557 - 560
Volltext (DOI) - Kabiru Nata’ala, M., Avila Santos, A.P., Kasmanas, J.C., Bartholomäus, A., Saraiva, J.P., Silva, S.G., Keller-Costa, T., Costa, R., Gomes, N.C.M., de Carvalho, A.C.P.L.F., Stadler, P.F., Sipoli Sanches, D., Nunes da Rocha, U. (2022):
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes
Environ. Microbiome 17 , art. 57
Volltext (DOI) - Kamjunke, N., Beckers, L.-M., Herzsprung, P., von Tümpling, W., Lechtenfeld, O., Tittel, J., Risse-Buhl, U., Rode, M., Wachholz, A., Kallies, R., Schulze, T., Krauss, M., Brack, W., Comero, S., Gawlik, B.M., Skejo, H., Tavazzi, S., Mariani, G., Borchardt, D., Weitere, M. (2022):
Lagrangian profiles of riverine autotrophy, organic matter transformation, and micropollutants at extreme drought
Sci. Total Environ. 828 , art. 154243
Volltext (DOI) - Karagulyan, M., Goebel, M.-O., Diehl, D., Abu Quba, A.A., Kästner, M., Bachmann, J., Wick, L.Y., Schaumann, G.E., Miltner, A. (2022):
Water stress-driven changes in bacterial cell surface properties
Appl. Environ. Microb. 88 (21), e00732-22
Volltext (DOI) - Keller-Costa, T., Kozma, L., Silva, S.G., Toscan, R., Gonçalves, J., Lago-Lestón, A., Kyrpides, N.C., Nunes da Rocha, U., Costa, R. (2022):
Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome
Microbiome 10 , art. 151
Volltext (DOI) - Khan, A.M., Gharasoo, M., Wick, L.Y., Thullner, M. (2022):
Phase-specific stable isotope fractionation effects during combined gas-liquid phase exchange and biodegradation
Environ. Pollut. 309 , art. 119737
Volltext (DOI) - Khan, N., Brizola Toscan, R., Lunayo, A., Wamalwa, B., Muge, E., Mulaa, F.J., Kallies, R., Harms, H., Wick, L.Y., Nunes da Rocha, U. (2022):
Draft genome sequences of two Sphingobium species associated with hexachlorocyclohexane (HCH) degradation isolated from an HCH-contaminated soil
Microbiol. Resour. Announc. 11 (3), e00886-21
Volltext (DOI) - Khurana, S., Heße, F., Hildebrandt, A., Thullner, M. (2022):
Predicting the impact of spatial heterogeneity on microbially mediated nutrient cycling in the subsurface
Biogeosciences 19 (3), 665 - 688
Volltext (DOI) - Knecht, C.A., Krüger, M., Kellmann, S., Mäusezahl, I., Möder, M., Adelowo, O.O., Vollmers, J., Kaster, A.-K., Nivala, J., Müller, J.A. (2022):
Cellular stress affects the fate of microbial resistance to folate inhibitors in treatment wetlands
Sci. Total Environ. 845 , art. 157318
Volltext (DOI) - Koók, L., Rosa, L.F.M., Harnisch, F., Žitka, J., Otmar, M., Nemestóthy, N., Bakonyi, P., Kretzschmar, J. (2022):
Functional stability of novel homogeneous and heterogeneous cation exchange membranes for abiotic and microbial electrochemical technologies
J. Membr. Sci. 658 , art. 120705
Volltext (DOI) - Korth, B., Pous, N., Hönig, R., Haus, P., Borim Corrêa, F., Nunes da Rocha, U., Puig, S., Harnisch, F. (2022):
Electrochemical and microbial dissection of electrified biotrickling filters
Front. Microbiol. 13 , art. 869474
Volltext (DOI) - Koskimäki, J.J., Pohjanen, J., Kvist, J., Fester, T., Härtig, C., Podolich, O., Fluch, S., Edesi, J., Häggman, H., Pirttilä, A.M. (2022):
The meristem-associated endosymbiont Methylorubrum extorquens DSM13060 reprograms development and stress responses of pine seedlings
Tree Physiol. 42 (2), 391 - 410
Volltext (DOI) - Krause, J.L., Engelmann, B., Nunes da Rocha, U., Pierzchalski, A., Chang, H.D., Zenclussen, A.C., von Bergen, M., Rolle-Kampczyk, U., Herberth, G. (2022):
MAIT cell activation is reduced by direct and microbiota-mediated exposure to bisphenols
Environ. Int. 158 , art. 106985
Volltext (DOI) - Kuchenbuch, A., Frank, R., Vazquez Ramos, J., Jahnke, H.-G., Harnisch, F. (2022):
Electrochemical microwell plate to study electroactive microorganisms in parallel and real-time
Front. Bioeng. Biotechnol. 10 , art. 821734
Volltext (DOI) - Kuhn, T., Buffi, M., Bindschedler, S., Chain, P.S., Gonzalez, D., Stanley, C.E., Wick, L.Y., Junier, P., Li Richter, X.-Y. (2022):
Design and construction of 3D printed devices to investigate active and passive bacterial dispersal on hydrated surfaces
BMC Biol. 20 , art. 203
Volltext (DOI) - Le, A.V., Muehe, E.M., Drabesch, S., Pacheco, J.L., Bayer, T., Joshi, P., Kappler, A., Mansor, M. (2022):
Environmental risk of arsenic mobilization from disposed sand filter materials
Environ. Sci. Technol. 56 (23), 16822 - 16830
Volltext (DOI) - Li, S., Abdulkadir, N., Schattenberg, F., Nunes da Rocha, U., Grimm, V., Müller, S., Liu, Z. (2022):
Stabilizing microbial communities by looped mass transfer
Proc. Natl. Acad. Sci. U.S.A. 119 (17), e2117814119
Volltext (DOI) - Li, S., Liu, Z., Süring, C., Müller, S., Zeng, P. (2022):
The impact of the antibiotic fosfomycin on wastewater communities measured by flow cytometry
Front. Microbiol. 12 , art. 737831
Volltext (DOI) - Liu, B., Sträuber, H., Saraiva, J., Harms, H., Silva, S.G., Kasmanas, J.C., Kleinsteuber, S., Nunes da Rocha, U. (2022):
Machine learning-assisted identification of bioindicators predicts medium-chain carboxylate production performance of an anaerobic mixed culture
Microbiome 10 , art. 48
Volltext (DOI) - Lo, H.-Y., Martínez-Lavanchy, P., Goris, T., Heider, J., Boll, M., Kaster, A.-K., Müller, J.A. (2022):
IncP-type plasmids carrying genes for antibiotic resistance or for aromatic compound degradation are prevalent in sequenced Aromatoleum and Thauera strains
Environ. Microbiol. 24 (12), 6411 - 6425
Volltext (DOI) - Logroño, W., Kluge, P., Kleinsteuber, S., Harms, H., Nikolausz, M. (2022):
Effect of inoculum microbial diversity in ex situ biomethanation of hydrogen
Bioengineering-Basel 9 (11), art. 678
Volltext (DOI) - Logroño, W., Nikolausz, M., Harms, H., Kleinsteuber, S. (2022):
Physiological effects of 2-bromoethanesulfonate on hydrogenotrophic pure and mixed cultures
Microorganisms 10 (2), art. 355
Volltext (DOI) - López-Mondéjar, R., Tláskal, V., Nunes da Rocha, U., Baldrian, P. (2022):
Global distribution of carbohydrate utilization potential in the prokaryotic tree of life
mSystems 7 (6), e00829-22
Volltext (DOI) - Mahecha, M.D., Bastos, A., Bohn, F.J., Eisenhauer, N., Feilhauer, H., Hartmann, H., Hickler, T., Kalesse-Los, H., Migliavacca, M., Otto, F.E.L., Peng, J., Quaas, J., Tegen, I., Weigelt, A., Wendisch, M., Wirth, C. (2022):
Biodiversity loss and climate extremes — study the feedbacks
Nature 612 (7938), 30 - 32
Volltext (DOI) - Menezes Bergo, N., Torres-Ballesteros, A., Negrão Signori, C., Benites, M., Jovane, L., Murton, B.J., Nunes da Rocha, U., Pellizari, V.H. (2022):
Spatial patterns of microbial diversity in Fe-Mn deposits and associated sediments in the Atlantic and Pacific oceans
Sci. Total Environ. 837 , art. 155792
Volltext (DOI) - Neubert, K., Hell, M., Chávez Morejón, M., Harnisch, F. (2022):
Hetero-coupling of bio-based medium chain carboxylic acids by Kolbe electrolysis enables high fuel yield and efficiency
ChemSusChem 15 (21), e202201426
Volltext (DOI) - Oliveira Monteiro, L.M., Saraiva, J.P., Brizola Toscan, R., Stadler, P.F., Silva-Rocha, R., Nunes da Rocha, U. (2022):
PredicTF: prediction of bacterial transcription factors in complex microbial communities using deep learning
Environ. Microbiome 17 , art. 7
Volltext (DOI) - Pozdnyakova, N., Dubrovskaya, E., Schlosser, D., Kuznetsova, S., Sigida, E., Grinev, V., Golubev, S., Kryuchkova, E., Varese, G.C., Turkovskaya, O. (2022):
Widespread ability of ligninolytic fungi to degrade hazardous organic pollutants as the basis for the self-purification ability of natural ecosystems and for mycoremediation technologies
Appl. Sci. 12 (4), art. 2164
Volltext (DOI) - Puiggené, Ò., Cárdenas Espinosa, M.J., Schlosser, D., Thies, S., Jehmlich, N., Kappelmeyer, U., Schreiber, S., Wibberg, D., Kalinowski, J., Harms, H., Heipieper, H.J., Eberlein, C. (2022):
Extracellular degradation of a polyurethane oligomer involving outer membrane vesicles and further insights on the degradation of 2,4-diaminotoluene in Pseudomonas capeferrum TDA1
Sci. Rep. 12 , art. 2666
Volltext (DOI) - Qin, W., Stärk, H.-J., Müller, S., Reemtsma, T. (2022):
Exploring the extent of phosphorus and heavy metal uptake by single cells of Saccharomyces cerevisiae and their effects on intrinsic elements by SC-ICP-TOF-MS
Front. Microbiol. 13 , art. 870931
Volltext (DOI) - Robazza, A., Welter, C., Kubisch, C., Baleeiro, F.C.F., Ochsenreither, K., Neumann, A. (2022):
Co-fermenting pyrolysis aqueous condensate and pyrolysis syngas with anaerobic microbial communities enables L-malate production in a secondary fermentative stage
Fermentation 8 (10), art. 512
Volltext (DOI) - Scarabotti, F., Bühler, K., Schmidt, M., Harnisch, F. (2022):
Thickness and roughness of transparent gold-palladium anodes have no impact on growth kinetics and yield coefficients of early-stage Geobacter sulfurreducens biofilms
Bioelectrochemistry 144 , art. 108043
Volltext (DOI) - Scarabotti, F., Kuchenbuch, A., Kallies, R., Bühler, K., Harnisch, F. (2022):
Towards real-time determination of yield coefficients of early-stage electroactive biofilms using optical microscopy
Front. Energy Res. 10 , art. 920266
Volltext (DOI) - Scholz, S., Brack, W., Escher, B.I., Hackermüller, J., Liess, M., von Bergen, M., Wick, L.Y., Zenclussen, A.C., Altenburger, R. (2022):
The EU chemicals strategy for sustainability: an opportunity to develop new approaches for hazard and risk assessment
Arch. Toxicol. 96 (8), 2381 - 2386
Volltext (DOI) - Schultz, J., Argentino, I.C.V., Kallies, R., Nunes da Rocha, U., Rosado, A.S. (2022):
Polyphasic analysis reveals potential petroleum hydrocarbon degradation and biosurfactant production by rare biosphere thermophilic bacteria from Deception Island, an active Antarctic volcano
Front. Microbiol. 13 , art. 885557
Volltext (DOI) - Schwab, L., Popp, D., Nowack, G., Bombach, P., Vogt, C., Richnow, H.H. (2022):
Structural analysis of microbiomes from salt caverns used for underground gas storage
Int. J. Hydrog. Energy 47 (47), 20684 - 20694
Volltext (DOI) - Schwarz, E., Khurana, S., Chakrawal, A., Chavez Rodriguez, L., Wirsching, J., Streck, T., Manzoni, S., Thullner, M., Pagel, H. (2022):
Spatial control of microbial pesticide degradation in soil: A model-based scenario analysis
Environ. Sci. Technol. 56 (20), 14427 - 14438
Volltext (DOI) - Spake, R., Barajas-Barbosa, M.P., Blowes, S.A., Bowler, D.E., Callaghan, C.T., Garbowski, M., Jurburg, S.D., van Klink, R., Korell, L., Ladouceur, E., Rozzi, R., Viana, D.S., Xu, W.-B., Chase, J.M. (2022):
Detecting thresholds of ecological change in the anthropocene
Annu. Rev. Environ. Resour. 47 , 797 - 821
Volltext (DOI) - Sturion Lorenzi, A., Bonatelli, M.L., Ahii Chia, M., Peressim, L., Quecine, M.C. (2022):
Opposite sides of Pantoea agglomerans and its associated commercial outlook
Microorganisms 10 (10), art. 2072
Volltext (DOI) - Sun, F., Mellage, A., Wang, Z., Bakkour, R., Griebler, C., Thullner, M., Cirpka, O.A., Elsner, M. (2022):
Toward improved bioremediation strategies: Response of BAM-degradation activity to concentration and flow changes in an inoculated bench-scale sediment tank
Environ. Sci. Technol. 56 (7), 4050 - 4061
Volltext (DOI) - Teetz, N., Holtmann, D., Harnisch, F., Stöckl, M. (2022):
Upgrading Kolbe electrolysis – Highly efficient production of green fuels and solvents by coupling biosynthesis and electrosynthesis
Angew. Chem.-Int. Edit. 61 (50), e202210596
Volltext (DOI) - Tucci, M., Cruz Viggi, C., Crognale, S., Matturro, B., Rossetti, S., Capriotti, A.L., Cavaliere, C., Cerrato, A., Montone, C.M., Harnisch, F., Aulenta, F. (2022):
Insights into the syntrophic microbial electrochemical oxidation of toluene: a combined chemical, electrochemical, taxonomical, functional gene-based, and metaproteomic approach
Sci. Total Environ. 850 , art. 157919
Volltext (DOI) - Tucci, M., Milani, A., Resitano, M., Cruz Viggi, C., Giampaoli, O., Miccheli, A., Crognale, S., Matturro, B., Rossetti, S., Harnisch, F., Aulenta, F. (2022):
Syntrophy drives the microbial electrochemical oxidation of toluene in a continuous-flow “bioelectric well”
J. Environ. Chem. Eng. 10 (3), art. 107799
Volltext (DOI) - Undiandeye, J., Gallegos, D., Sträuber, H., Nelles, M., Stinner, W. (2022):
Ensiling parameters in vertical columns and multiple kinetic models evaluation of biomethane potential of ensiled sugar beet leaves
Biofuels-UK 13 (8), 995 - 1005
Volltext (DOI) - Vasileiadis, S., Perruchon, C., Scheer, B., Adrian, L., Steinbach, N., Trevisan, M., Plaza-Bolaños, P., Agüera, A., Chatzinotas, A., Karpouzas, D.G. (2022):
Nutritional inter-dependencies and a carbazole-dioxygenase are key elements of a bacterial consortium relying on a Sphingomonas for the degradation of the fungicide thiabendazole
Environ. Microbiol. 24 (11), 5105 - 5122
Volltext (DOI) - Werner, K.A., Poehlein, A., Schneider, D., El-Said, K., Wöhrmann, M., Linkert, I., Hübner, T., Brüggemann, N., Prost, K., Daniel, R., Grohmann, E. (2022):
Thermophilic composting of human feces: Development of bacterial community composition and antimicrobial resistance gene pool
Front. Microbiol. 13 , art. 824834
Volltext (DOI) - Werner, K.A., Schneider, D., Poehlein, A., Diederich, N., Feyen, L., Axtmann, K., Hübner, T., Brüggemann, N., Prost, K., Daniel, R., Grohmann, E. (2022):
Metagenomic insights into the changes of antibiotic resistance and pathogenicity factor pools upon thermophilic composting of human excreta
Front. Microbiol. 13 , art. 826071
Volltext (DOI) - Xiong, B.-J., Kleinsteuber, S., Sträuber, H., Dusny, C., Harms, H., Wick, L.Y. (2022):
Impact of fungal hyphae on growth and dispersal of obligate anaerobic bacteria in aerated habitats
mBio 13 (3), e00769-22
Volltext (DOI) - Xiong, B.-J., Stanley, C.E., Dusny, C., Schlosser, D., Harms, H., Wick, L.Y. (2022):
pH distribution along growing fungal hyphae at microscale
J. Fungi 8 (6), art. 599
Volltext (DOI) - You, X., Kallies, R., Hild, K., Hildebrandt, A., Harms, H., Chatzinotas, A., Wick, L.Y. (2022):
Transport of marine tracer phage particles in soil
Sci. Total Environ. 814 , art. 152704
Volltext (DOI) - You, X., Kallies, R., Kühn, I., Schmidt, M., Harms, H., Chatzinotas, A., Wick, L.Y. (2022):
Phage co-transport with hyphal-riding bacteria fuels bacterial invasion in a water-unsaturated microbial model system
ISME J. 16 (5), 1275 - 1283
Volltext (DOI) - You, X., Klose, N., Kallies, R., Harms, H., Chatzinotas, A., Wick, L.Y. (2022):
Mycelia-assisted isolation of non-host bacteria able to co-transport phages
Viruses 14 (2), art. 195
Volltext (DOI) - Zahn, M., König, G., Pham, H.V.C., Seroka, B., Lazny, R., Yang, G., Ouerfelli, O., Lotowski, Z., Rohwerder, T. (2022):
Mechanistic details of the actinobacterial lyase-catalyzed degradation reaction of 2-hydroxyisobutyryl-CoA
J. Biol. Chem. 298 (1), art. 101522
Volltext (DOI) - Zhang, X., Barceló, D., Clougherty, R.J., Gao, B., Harms, H., Tefsen, B., Vithanage, M., Wang, H., Wang, Z., Wells, M. (2022):
“Potentially toxic element”─Something that means everything means nothing
Environ. Sci. Technol. 56 (17), 11922 - 11925
Volltext (DOI) - Zhou, J., Saeidi, N., Wick, L.Y., Xie, Y., Kopinke, F.-D., Georgi, A. (2022):
Efficient removal of trifluoroacetic acid from water using surface-modified activated carbon and electro-assisted desorption
J. Hazard. Mater. 436 , art. 129051
Volltext (DOI) - Zhou, L.-J., Wang, Y.-Y., Li, S.-L., Cao, L., Jiang, F.-L., Maskow, T., Liu, Y. (2022):
Core–shell polydopamine/Cu nanometer rods efficiently deactivate microbes by mimicking chloride-activated peroxidases
ACS Omega 7 (34), 29984 - 29994
Volltext (DOI)
2021 (60)
- Álvarez-Barragán, J., Cravo-Laureau, C., Wick, L.Y., Duran, R. (2021):
Fungi in PAH-contaminated marine sediments: Cultivable diversity and tolerance capacity towards PAH
Mar. Pollut. Bull. 164 , art. 112082
Volltext (DOI) - Baleeiro, F.C.F., Ardila, M.S., Kleinsteuber, S., Sträuber, H. (2021):
Effect of oxygen contamination on propionate and caproate formation in anaerobic fermentation
Front. Bioeng. Biotechnol. 9 , art. 725443
Volltext (DOI) - Baleeiro, F.C.F., Kleinsteuber, S., Sträuber, H. (2021):
Hydrogen as a co-electron donor for chain elongation with complex communities
Front. Bioeng. Biotechnol. 9 , art. 650631
Volltext (DOI) - Braune, M., Yuan, B., Sträuber, H., Mcdowall, S.C., Nitzsche, R., Gröngröft, A. (2021):
A downstream processing cascade for separation of caproic and caprylic acid from maize silage-based fermentation broth
Front. Bioeng. Biotechnol. 9 , art. 725578
Volltext (DOI) - Calabrese, F., Stryhanyuk, H., Moraru, C., Schlömann, M., Wick, L.Y., Richnow, H.H., Musat, F., Musat, N. (2021):
Metabolic history and metabolic fitness as drivers of anabolic heterogeneity in isogenic microbial populations
Environ. Microbiol. 23 (11), 6764 - 6776
Volltext (DOI) - Ceballos-Escalera, A., Pous, N., Chiluiza-Ramos, P., Korth, B., Harnisch, F., Bañeras, L., Balaguer, M.D., Puig, S. (2021):
Electro-bioremediation of nitrate and arsenite polluted groundwater
Water Res. 190 , art. 116748
Volltext (DOI) - Clark, A.T., Arnoldi, J.-F., Zelnik, Y.R., Barabas, G., Hodapp, D., Karakoç, C., König, S., Radchuk, V., Donohue, I., Huth, A., Jacquet, C., de Mazancourt, C., Mentges, A., Nothaaß, D., Shoemaker, L.G., Taubert, F., Wiegand, T., Wang, S., Chase, J.M., Loreau, M., Harpole, S. (2021):
General statistical scaling laws for stability in ecological systems
Ecol. Lett. 24 (7), 1474 - 1486
Volltext (DOI) - Cohen, Y., Pasternak, Z., Müller, S., Hübschmann, T., Schattenberg, F., Sivakala, K.K., Abed-Rabbo, A., Chatzinotas, A., Jurkevitch, E. (2021):
Community and single cell analyses reveal complex predatory interactions between bacteria in high diversity systems
Nat. Commun. 12 , art. 5481
Volltext (DOI) - da Rosa Braun, P.H., Canuto de Almeida e Silva, T., Rodrigo Quejigo, J., Kuchenbuch, A., Rezwan, K., Harnisch, F., Wilhelm, M. (2021):
Impact of surface properties of porous SiOC‐based materials on the performance of Geobacter biofilm anodes
ChemElectroChem 8 (5), 850 - 857
Volltext (DOI) - Dalby, F.R., Nikolausz, M., Hansen, M.J., Feilberg, A. (2021):
Effects of combined tannic acid/fluoride on sulfur transformations and methanogenic pathways in swine manure
PLOS One 16 (9), art. e0257759
Volltext (DOI) - Dumke, R., de la Cruz Barron, M., Oertel, R., Helm, B., Kallies, R., Berendonk, T.U., Dalpke, A. (2021):
Evaluation of two methods to concentrate SARS-CoV-2 from untreated wastewater
Pathogens 10 (2), art. 195
Volltext (DOI) - Dzofou Ngoumelah, D., Harnisch, F., Kretzschmar, J. (2021):
Benefits of age–Improved resistance of mature electroactive biofilm anodes in anaerobic digestion
Environ. Sci. Technol. 55 (12), 8258 - 8266
Volltext (DOI) - Fricke, C., Klee, T., Richter, S., Paufler, S., Harms, H., Maskow, T. (2021):
Numerical heat flow and transport simulation as a development tool for the design of isothermal microcalorimeters
Thermochim. Acta 706 , art. 179070
Volltext (DOI) - Golparvar, A., Kästner, M., Thullner, M. (2021):
Pore-scale modeling of microbial activity: What we have and what we need
Vadose Zone J. 20 (1), e20087
Volltext (DOI) - González-González, S., Astorga-Eló, M., Campos, M., Wick, L.Y., Acuña, J.J., Jorquera, M.A. (2021):
Compost fungi allow for effective dispersal of putative PGP bacteria
Agronomy-Basel 11 (8), art. 1567
Volltext (DOI) - Greinert, T., Vogel, K., Maskow, T., Held, C. (2021):
New thermodynamic activity-based approach allows predicting the feasibility of glycolysis
Sci. Rep. 11 , art. 6125
Volltext (DOI) - Guerra, C.A., Bardgett, R.D., Caon, L., Crowther, T.W., Delgado-Baquerizo, M., Montanarella, L., Navarro, L.M., Orgiazzi, A., Singh, B.K., Tedersoo, L., Vargas-Rojas, R., Briones, M.J.I., Buscot, F., Cameron, E.K., Cesarz, S., Chatzinotas, A., Cowan, D.A., Djukic, I., van der Hoogen, J., Lehmann, A., Maestre, F.T., Marín, C., Reitz, T., Rillig, M.C., Smith, L.C., de Vries, F.T., Weigelt, A., Wall, D.H., Eisenhauer, N. (2021):
Tracking, targeting, and conserving soil biodiversity - A monitoring and indicator system can inform policy
Science 371 (6526), 239 - 241
Volltext (DOI) - Harnisch, F., Chávez Morejón, M. (2021):
Hydrogen from water is more than a fuel: Hydrogenations and hydrodeoxygenations for a biobased economy
Chem. Rec. 21 (9), 2277 - 2289
Volltext (DOI) - Harnisch, F., Korth, B. (2021):
First settlers persist
Joule 5 (6), 1316 - 1319
Volltext (DOI) - Heeger, F., Bourne, E.C., Wurzbacher, C., Funke, E., Lipzen, A., He, G., Ng, V., Grigoriev, I.V., Schlosser, D., Monaghan, M.T. (2021):
Evidence for lignocellulose-decomposing enzymes in the genome and transcriptome of the aquatic hyphomycete Clavariopsis aquatica
J. Fungi 7 (10), art. 854
Volltext (DOI) - Heyse, J., Schattenberg, F., Rubbens, P., Müller, S., Waegeman, W., Boon, N., Props, R. (2021):
Predicting the presence and abundance of bacterial taxa in environmental communities through flow cytometric fingerprinting
mSystems 6 (5), e00551-21
Volltext (DOI) - Hofmann, P., Clark, A., Hoffmann, P., Chatzinotas, A., Harpole, W.S., Dunker, S. (2021):
Beyond nitrogen: phosphorus - estimating the minimum niche dimensionality for resource competition between phytoplankton
Ecol. Lett. 24 (4), 761 - 771
Volltext (DOI) - Kasmanas, J.C., Bartholomäus, A., Borim Corrêa, F., Tal, T., Jehmlich, N., Herberth, G., von Bergen, M., Stadler, P.F., de Carvalho, A.C.P.L.F., Nunes da Rocha, U. (2021):
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
Nucleic Acids Res. 49 (D1), D743 - D750
Volltext (DOI) - Keller, N.-S., Hornbruch, G., Lüders, K., Werban, U., Vogt, C., Kallies, R., Dahmke, A., Richnow, H.H. (2021):
Monitoring of the effects of a temporally limited heat stress on microbial communities in a shallow aquifer
Sci. Total Environ. 781 , art. 146377
Volltext (DOI) - Keller-Costa, T., Lago-Lestón, A., Saraiva, J.P., Toscan, R., Silva, S.G., Gonçalves, J., Cox, C.J., Kyrpides, N., Nunes da Rocha, U., Costa, R. (2021):
Metagenomic insights into the taxonomy, function, and dysbiosis of prokaryotic communities in octocorals
Microbiome 9 , art. 72
Volltext (DOI) - Khan, N., Brizola Toscan, R., Lunayo, A., Wamalwa, B., Muge, E., Mulaa, F.J., Kallies, R., Harms, H., Wick, L.Y., Nunes da Rocha, U. (2021):
Draft genome sequence of Fusarium equiseti K3, a fungal species isolated from hexachlorocyclohexane-contaminated soil
Microbiol. Resour. Announc. 10 (47), e00885-21
Volltext (DOI) - Korth, B., Heber, C., Normant-Saremba, M., Maskow, T., Harnisch, F. (2021):
Precious data from tiny samples: Revealing the correlation between energy content and the chemical oxygen demand of municipal wastewater using micro-bomb combustion calorimetry
Front. Energy Res. 9 , art. 705800
Volltext (DOI) - Kretzschmar, J., Harnisch, F. (2021):
Electrochemical impedance spectroscopy on biofilm electrodes – conclusive or euphonious?
Curr. Opin. Electrochem. 29 , art. 100757
Volltext (DOI) - Li, D., Zhang, H., Xiang, H., Rasul, S., Fontmorin, J.-M., Izadi, P., Roldan, A., Taylor, R., Feng, Y., Banerji, L., Cowan, A., Yu, E.H., Xuan, J. (2021):
How to go beyond C1 products with electrochemical reduction of CO2
Sustain. Energ. Fuels 5 (23), 5893 - 5914
Volltext (DOI) - Liess, M., Liebmann, L., Vormeier, P., Weisner, O., Altenburger, R., Borchardt, D., Brack, W., Chatzinotas, A., Escher, B., Foit, K., Gunold, R., Henz, S., Hitzfeld, K.L., Schmitt-Jansen, M., Kamjunke, N., Kaske, O., Knillmann, S., Krauss, M., Küster, E., Link, M., Lück, M., Möder, M., Müller, A., Paschke, A., Schäfer, R.B., Schneeweiss, A., Schreiner, V.C., Schulze, T., Schüürmann, G., von Tümpling, W., Weitere, M., Wogram, J., Reemtsma, T. (2021):
Pesticides are the dominant stressors for vulnerable insects in lowland streams
Water Res. 201 , art. 117262
Volltext (DOI) - Logroño, W., Popp, D., Nikolausz, M., Kluge, P., Harms, H., Kleinsteuber, S. (2021):
Microbial communities in flexible biomethanation of hydrogen are functionally resilient upon starvation
Front. Microbiol. 12 , art. 619632
Volltext (DOI) - Melkonian, C., Fillinger, L., Atashgahi, S., Nunes da Rocha, U., Kuiper, E., Olivier, B., Braster, M., Gottstein, W., Helmus, R., Parsons, J.R., Smidt, H., van der Waals, M., Gerritse, J., Brandt, B.W., Röling, W.F.M., Molenaar, D., van Spanning, R.J.M. (2021):
High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumers
Commun. Biol. 4 , art. 530
Volltext (DOI) - Metze, D., Popp, D., Schwab, L., Keller, N.-S., Nunes da Rocha, U., Richnow, H.-H., Vogt, C. (2021):
Temperature management potentially affects carbon mineralization capacity and microbial community composition of a shallow aquifer
FEMS Microbiol. Ecol. 97 (2), fiaa261
Volltext (DOI) - Müller, C., Knöller, K., Lucas, R., Kleinsteuber, S., Trabitzsch, R., Weiß, H., Stollberg, R., Richnow, H.H., Vogt, C. (2021):
Benzene degradation in contaminated aquifers: Enhancing natural attenuation by injecting nitrate
J. Contam. Hydrol. 238 , art. 103759
Volltext (DOI) - Neubert, K., Kretzschmar, J., dos Santos, T.R., Härtig, C., Harnisch, F. (2021):
Making sense of gas measurements: quantification of multicomponent gas mixtures in biological and chemical laboratory experiments
ChemTexts 7 (4), art. 27
Volltext (DOI) - Neubert, K., Schmidt, M., Harnisch, F. (2021):
Platinized titanium as alternative cost-effective anodes for the efficient Kolbe electrolysis in aqueous electrolyte solutions
ChemSusChem 14 (15), 3097 - 3109
Volltext (DOI) - Oliveira, V., Polónia, A.R.M., Cleary, D.F.R., Huang, Y.M., de Voogd, N.J., Nunes da Rocha, U., Gomes, N.C.M. (2021):
Characterization of putative circular plasmids in sponge‐associated bacterial communities using a selective multiply‐primed rolling circle amplification
Mol. Ecol. Resour. 21 (1), 110 - 121
Volltext (DOI) - Pous, N., Korth, B., Osset-Álvarez, M., Balaguer, M.D., Harnisch, F., Puig, S. (2021):
Electrifying biotrickling filters for the treatment of aquaponics wastewater
Bioresour. Technol. 319 , art. 124221
Volltext (DOI) - Qin, W., Stärk, H.-J., Müller, S., Reemtsma, T., Wagner, S. (2021):
Determination of elemental distribution and evaluation of elemental concentration in single Saccharomyces cerevisiae cells using single cell-inductively coupled plasma mass spectrometry
Metallomics 13 (6), mfab032
Volltext (DOI) - Rago, L., Popp, D., Heiker, J.T., Harnisch, F. (2021):
Electroactive microorganisms in mouse feces
Electrochim. Acta 365 , art. 137326
Volltext (DOI) - Rodrigo Quejigo, J., Korth, B., Kuchenbuch, A., Harnisch, F. (2021):
Redox potential heterogeneity in fixed bed electrodes leads to microbial stratification and inhomogeneous performance
ChemSusChem 14 (4), 1155 - 1165
Volltext (DOI) - Rossi, C., Zadra, N., Fevola, C., Ecke, F., Hörnfeldt, B., Kallies, R., Kazimirova, M., Magnusson, M., Olsson, G.E., Ulrich, R.G., Jääskeläinen, A.J., Henttonen, H., Hauffe, H.C. (2021):
Evolutionary relationships of Ljungan virus variants circulating in multi-host systems across Europe
Viruses 13 (7), art. 1317
Volltext (DOI) - Rummel, C.D., Lechtenfeld, O.J., Kallies, R., Benke, A., Herzsprung, P., Rynek, R., Wagner, S., Potthoff, A., Jahnke, A., Schmitt-Jansen, M. (2021):
Conditioning film and early biofilm succession on plastic surfaces
Environ. Sci. Technol. 55 (16), 11006 - 11018
Volltext (DOI) - Santoro, C., Babanova, S., Cristiani, P., Artyushkova, K., Atanassov, P., Bergel, A., Bretschger, O., Brown, R.K., Carpenter, K., Colombo, A., Cortese, R., Erable, B., Harnisch, F., Kodali, M., Phadke, S., Riedl, S., Rosa, L.F.M., Schröder, G. (2021):
How comparable are microbial electrochemical systems around the globe? An electrochemical and microbiological cross‐laboratory study
ChemSusChem 14 (11), 2313 - 2330
Volltext (DOI) - Santoro, C., Babanova, S., Cristiani, P., Artyushkova, K., Atanassov, P., Bergel, A., Bretschger, O., Brown, R.K., Carpenter, K., Colombo, A., Cortese, R., Erable, B., Harnisch, F., Kodali, M., Phadke, S., Riedl, S., Rosa, L.F.M., Schröder, U. (2021):
Cover profile: How comparable are microbial electrochemical systems around the globe? An electrochemical and microbiological cross‐laboratory study
ChemSusChem 14 (11), 2267 - 2267
Volltext (DOI) - Saraiva, J.P., Bartholomäus, A., Kallies, R., Gomes, M., Bicalho, M., Kasmanas, J.C., Vogt, C., Chatzinotas, A., Stadler, P., Dias, O., Nunes da Rocha, U. (2021):
OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes
Life Sci. Alliance 4 (12), e202101167
Volltext (DOI) - Saraiva, J.P., Worrich, A., Karakoç, C., Kallies, R., Chatzinotas, A., Centler, F., Nunes da Rocha, U. (2021):
Mining synergistic microbial interactions: a roadmap on how to integrate multi-omics data
Microorganisms 9 (4), art. 840
Volltext (DOI) - Scarabotti, F., Rago, L., Bühler, K., Harnisch, F. (2021):
The electrode potential determines the yield coefficients of early-stage Geobacter sulfurreducens biofilm anodes
Bioelectrochemistry 140 , art. 107752
Volltext (DOI) - Schmidt, J., Krohn, S., Kallies, R., Schneider, H., Zeller, K., Ziebolz, D., Berg, T., Haak, R. (2021):
Antibacterial effect of a brominated self-etch adhesive on carious dentin - An in vivo study
J. Dent. 105 , art. 103555
Volltext (DOI) - Sun, F., Mellage, A., Gharasoo, M., Melsbach, A., Cao, X., Zimmermann, R., Griebler, C., Thullner, M., Cirpka, O.A., Elsner, M. (2021):
Mass-transfer-limited biodegradation at low concentrations—Evidence from reactive transport modeling of isotope profiles in a bench-scale aquifer
Environ. Sci. Technol. 55 (11), 7386 - 7397
Volltext (DOI) - Sun, F., Peters, J., Thullner, M., Cirpka, O.A., Elsner, M. (2021):
Magnitude of diffusion- and transverse dispersion-induced isotope fractionation of organic compounds in aqueous systems
Environ. Sci. Technol. 55 (8), 4772 - 4782
Volltext (DOI) - Tláskal, V., Brabcová, V., Větrovský, T., Jomura, M., López-Mondéjar, R., Oliveira Monteiro, L.M., Saraiva, J.P., Human, Z.R., Cajthaml, T., Nunes da Rocha, U., Baldrian, P. (2021):
Complementary roles of wood-inhabiting fungi and bacteria facilitate deadwood decomposition
mSystems 6 (1), e01078-20
Volltext (DOI) - Tláskal, V., Brabcová, V., Větrovský, T., López-Mondéjar, R., Oliveira Monteiro, L.M., Saraiva, J.P., Nunes da Rocha, U., Baldrian, P. (2021):
Metagenomes, metatranscriptomes and microbiomes of naturally decomposing deadwood
Sci. Data 8 , art. 198
Volltext (DOI) - Tucci, M., Cruz Viggi, C., Resitano, M., Matturro, B., Crognale, S., Pietrini, I., Rossetti, S., Harnisch, F., Aulenta, F. (2021):
Simultaneous removal of hydrocarbons and sulfate from groundwater using a “bioelectric well”
Electrochim. Acta 388 , art. 138636
Volltext (DOI) - Vogel, K., Wei, R., Pfaff, L., Breite, D., Al-Fathi, H., Ortmann, C., Estrela-Lopis, I., Venus, T., Schulze, A., Harms, H., Bornscheuer, U.T., Maskow, T. (2021):
Enzymatic degradation of polyethylene terephthalate nanoplastics analyzed in real time by isothermal titration calorimetry
Sci. Total Environ. 773 , art. 145111
Volltext (DOI) - Voigt, E., Rall, B.C., Chatzinotas, A., Brose, U., Rosenbaum, B. (2021):
Phage strategies facilitate bacterial coexistence under environmental variability
PeerJ 9 , art. e12194
Volltext (DOI) - Vučić, V., Müller, S. (2021):
New developments in biological phosphorus accessibility and recovery approaches from soil and waste streams
Eng. Life Sci. 21 (3-4), 77 - 86
Volltext (DOI) - Vučić, V., Süring, C., Harms, H., Müller, S., Günther, S. (2021):
A framework for P-cycle assessment in wastewater treatment plants
Sci. Total Environ. 760 , art. 143392
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Disentangling multiple chemical and non-chemical stressors in a lotic ecosystem using a longitudinal approach
Sci. Total Environ. 769 , art. 144324
Volltext (DOI) - Zhou, J., Saeidi, N., Wick, L.Y., Kopinke, F.-D., Georgi, A. (2021):
Adsorption of polar and ionic organic compounds on activated carbon: Surface chemistry matters
Sci. Total Environ. 794 , art. 148508
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Investigating community dynamics and performance during microbial electrochemical degradation of whey
ChemElectroChem 7 (4), 989 - 997
Volltext (DOI) - Askitosari, T.D., Berger, C., Tiso, T., Harnisch, F., Blank, L.M., Rosenbaum, M.A. (2020):
Coupling an electroactive Pseudomonas putida KT2440 with bioelectrochemical rhamnolipid production
Microorganisms 8 (12), art. 1959
Volltext (DOI) - Balciunas, E.M., Kappelmeyer, U., Harms, H., Heipieper, H.J. (2020):
Increasing ibuprofen degradation in constructed wetlands by bioaugmentation with gravel containing biofilms of an ibuprofen-degrading Sphingobium yanoikuyae
Eng. Life Sci. 20 (5-6), 160 - 167
Volltext (DOI) - Banitz, T., Chatzinotas, A., Worrich, A. (2020):
Prospects for integrating disturbances, biodiversity and ecosystem functioning using microbial systems
Front. Ecol. Evol. 8 , art. 21
Volltext (DOI) - Becker, D., Popp, D., Harms, H., Centler, F. (2020):
A modular metagenomics pipeline allowing for the inclusion of prior knowledge using the example of anaerobic digestion
Microorganisms 8 (5), art. 669
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Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19
Immunity 53 (6), 1296 - 1314
Volltext (DOI) - Bernardo-Cravo, A.P., Schmeller, D.S., Chatzinotas, A., Vredenburg, V.T., Loyau, A. (2020):
Environmental factors and host microbiomes shape host–pathogen dynamics
Trends Parasitol. 36 (7), 616 - 633
Volltext (DOI) - Borim Corrêa, F., Saraiva, J.P., Stadler, P.F., Nunes da Rocha, U. (2020):
TerrestrialMetagenomeDB: a public repository of curated and standardized metadata for terrestrial metagenomes
Nucleic Acids Res. 48 (D1), D626 - D632
Volltext (DOI) - Carstens, L., Cowan, A.R., Seiwert, B., Schlosser, D. (2020):
Biotransformation of phthalate plasticizers and bisphenol A by marine-derived, freshwater, and terrestrial fungi
Front. Microbiol. 11 , art. 317
Volltext (DOI) - Centler, F., Günnigmann, S., Fetzer, I., Wendeberg, A. (2020):
Keystone species and modularity in microbial hydrocarbon degradation uncovered by network analysis and association rule mining
Microorganisms 8 (2), art. 190
Volltext (DOI) - Chen, S.-C., Sun, G.-X., Yan, Y., Konstantinidis, K.T., Zhang, S.-Y., Deng, Y., Li, X.-M., Cui, H.-L., Musat, F., Popp, D., Rosen, B.P., Zhu, Y.-G. (2020):
The Great Oxidation Event expanded the genetic repertoire of arsenic metabolism and cycling
Proc. Natl. Acad. Sci. U.S.A. 117 (19), 10414 - 10421
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Bacterial mock communities as standards for reproducible cytometric microbiome analysis
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Volltext (DOI) - Dalby, F.R., Hansen, M.J., Feilberg, A., Kümmel, S., Nikolausz, M. (2020):
Effect of tannic acid combined with fluoride and lignosulfonic acid on anaerobic digestion in the agricultural waste management chain
Bioresour. Technol. 307 , art. 123171
Volltext (DOI) - Feng, L., Lemes Perschke, Y.M., Fontaine, D., Nikolausz, M., Ward, A.J., Nunes da Rocha, U., Borim Corrêa, F., Eriksen, J., Sørensen, P., Møller, H.B. (2020):
Anaerobic digestion of co-ensiled cover crop and barley straw: Effect of co-ensiling ratios, manure addition and impact on microbial community structure
Ind. Crop. Prod. 144 , art. 112025
Volltext (DOI) - Formann, S., Hahn, A., Janke, L., Stinner, W., Sträuber, H., Logroño, W., Nikolausz, M. (2020):
Beyond sugar and ethanol production: Value generation opportunities through sugarcane residues
Front. Energy Res. 8 , art. 579577
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How to speed up the detection of aerobic microbial contaminations by using isothermal microcalorimetry
J. Therm. Anal. Calorim. 142 (5), 1933 - 1949
Volltext (DOI) - Fricke, C., Xu, J., Jiang, F.-L., Liu, Y., Harms, H., Maskow, T. (2020):
Rapid culture‐based detection of Legionella pneumophila using isothermal microcalorimetry with an improved evaluation method
Microb. Biotechnol. 13 (4), 1262 - 1272
Volltext (DOI) - Fruehauf, H.M., Enzmann, F., Harnisch, F., Ulber, R., Holtmann, D. (2020):
Microbial electrosynthesis – An inventory on technology readiness level and performance of different process variants
Biotechnol. J. 15 (10), art. 2000066
Volltext (DOI) - Greinert, T., Vogel, K., Mühlenweg, J.-K., Sadowski, G., Maskow, T., Held, C. (2020):
Standard Gibbs energy of metabolic reactions: VI. Glyceraldehyde 3-phosphate dehydrogenase reaction
Fluid Phase Equilib. 517 , art. 112597
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Standard Gibbs energy of metabolic reactions: V. Enolase reaction
BBA-Proteins Proteomics 1868 (4), art. 140365
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Blind spots in global soil biodiversity and ecosystem function research
Nat. Commun. 11 (1), art. 3870
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Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss
Microbiome 8 , art. 13
Volltext (DOI) - Hegner, R., Neubert, K., Kroner, C., Holtmann, D., Harnisch, F. (2020):
Coupled electrochemical and microbial catalysis for the production of polymer bricks
ChemSusChem 13 (19), 5295 - 5300
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Diversity and coexistence are influenced by time-dependent species interactions in a predator-prey system
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Label‐free four‐dimensional visualization of anaerobically growing electroactive biofilms
Cytom. Part A 97 (7), 737 - 741
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Physical, chemical and biological effects on soil bacterial dynamics in microscale models
Front. Ecol. Evol. 8 , art. 53
Volltext (DOI) - Kopinke, F.-D., Harms, H. (2020):
Letter: What are the active species in the photocatalytic disinfection of water?
Chem 6 (4), 806 - 807
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Determining incremental coulombic efficiency and physiological parameters of early stage Geobacter spp. enrichment biofilms
PLOS One 15 (6), e0234077
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Availability of hydrogen shapes the microbial abundance in biofilm anodes based on Geobacter enrichment
ChemElectroChem 7 (18), 3720 - 3724
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Cover profile: Availability of hydrogen shapes the microbial abundance in biofilm anodes based on Geobacter enrichment
ChemElectroChem 7 (18), 3683 - 3683
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Following the community development of SIHUMIx – a new intestinal in vitro model for bioreactor use
Gut Microbes 11 (4), 1116 - 1129
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The activation of mucosal-associated invariant T (MAIT) cells is affected by microbial diversity and riboflavin utilization in vitro
Front. Microbiol. 11 , art. 755
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Biotransformation of hexachlorocyclohexanes contaminated biomass for energetic utilization demonstrated in continuous anaerobic digestion system
J. Hazard. Mater. 384 , art. 121448
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Competition between butyrate fermenters and chain-elongating bacteria limits the efficiency of medium-chain carboxylate production
Front. Microbiol. 11 , art. 336
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Three novel Clostridia isolates produce n-caproate and iso-butyrate from lactate: comparative genomics of chain-elongating bacteria
Microorganisms 8 (12), art. 1970
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Draft genome sequences of three Clostridia isolates involved in lactate-based chain elongation
Microbiol. Resour. Announc. 9 (32), e00679-20
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Bacterial community diversity dynamics highlight degrees of nestedness and turnover patterns
Cytom. Part A 97 (7), 742 - 748
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Microbial resource management for ex situ biomethanation of hydrogen at alkaline pH
Microorganisms 8 , art. 614
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Metagenomics and stable isotope probing reveal the complementary contribution of fungal and bacterial communities in the recycling of dead biomass in forest soil
Soil Biol. Biochem. 148 , art. 107875
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Metagenome-assembled genome sequences of three uncultured Planktomarina sp. strains from the Northeast Atlantic Ocean
Microbiol. Resour. Announc. 9 (12), e00127-20
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Response‐surface‐optimized and scaled‐up microbial electrosynthesis of chiral alcohols
ChemSusChem 13 (7), 1808 - 1816
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Does glucose affect the de-esterification of methyl ferulate by Lactobacillus buchneri?
MicrobiologyOpen 9 (2), e971
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Microorganisms and their activities within microbial communities
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Biotechnological utilization of animal gut microbiota for valorization of lignocellulosic biomass
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μBialSim: Constraint-based dynamic simulation of complex microbiomes
Front. Bioeng. Biotechnol. 8 , art. 574
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New structural insights into bacterial sulfoacetaldehyde and taurine metabolism
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IL4I1 is a metabolic immune checkpoint that activates the AHR and promotes tumor progression
Cell 182 (5), 1252 - 1270.e34
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Cell 182 (6), 1419 - 1440
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Effects of electrokinetic phenomena on bacterial deposition monitored by quartz crystal microbalance with dissipation monitoring
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Electrokinetic effects on the interaction of phenanthrene with geo-sorbents
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Syngas-aided anaerobic fermentation for medium-chain carboxylate and alcohol production: the case for microbial communities
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Front. Microbiol. 10 , art. 166
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Hybridization of sugar-carboxylate-syngas platforms for the production of bio-alcohols from lignocellulosic biomass (LCB) – A state-of-the-art review and recommendations
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iDS372, a phenotypically reconciled model for the metabolism of Streptococcus pneumoniae strain R6
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Cytometry score: 23 to 4
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Tapping renewables: a new dawn for organic electrosynthesis in aqueous reaction media
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Corrigendum: Spotlight on the energy harvest of electroactive microorganisms: The impact of the applied anode potential
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Correction to: Anaerobic benzene mineralization by nitrate-reducing and sulfate-reducing microbial consortia enriched from the same site: comparison of community composition and degradation characteristics (vol 75, pg 941, 2017)
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Molecular quantification and differentiation of Candida species in biological specimens of patients with liver cirrhosis
PLOS One 13 (6), e0197319
Volltext (DOI) - Kuppardt, A., Fester, T., Härtig, C., Chatzinotas, A. (2018):
Rhizosphere protists change metabolite profiles in Zea mays
Front. Microbiol. 9 , art. 857
Volltext (DOI) - Lambrecht, J., Schattenberg, F., Harms, H., Müller, S. (2018):
Characterizing microbiome dynamics – flow cytometry based workflows from pure cultures to natural communities
J. Vis. Exp. (137), e58033
Volltext (DOI) - Lechner, U., Türkowsky, D., Dinh, T.T.H., Al-Fathi, H., Schwoch, S., Franke, S., Gerlach, M.-S., Koch, M., von Bergen, M., Jehmlich, N., Dang, T.C.H. (2018):
Desulfitobacterium contributes to the microbial transformation of 2,4,5‐T by methanogenic enrichment cultures from a Vietnamese active landfill
Microb. Biotechnol. 11 (6), 1137 - 1156
Volltext (DOI) - Lian, S., Nikolausz, M., Nijenhuis, I., Leite, A.F., Richnow, H.H. (2018):
Biotransformation and inhibition effects of hexachlorocyclohexanes during biogas production from contaminated biomass characterized by isotope fractionation concepts
Bioresour. Technol. 250 , 683 - 690
Volltext (DOI) - Liu, Z., Cichocki, N., Bonk, F., Günther, S., Schattenberg, F., Harms, H., Centler, F., Müller, S. (2018):
Ecological stability properties of microbial communities assessed by flow cytometry
mSphere 3 (1), e00564-17
Volltext (DOI) - Lv, Z., Jiang, J.H., Liebetrau, J., Richnow, H.H., Fischer, A., Ács, N., Nikolausz, M. (2018):
Ammonium chloride vs urea-induced ammonia inhibition of the biogas process assessed by stable isotope analysis
Chem. Eng. Technol. 41 (4), 671 - 679
Volltext (DOI) - Meng, X., Liu, B., Xi, C., Luo, X., Yuan, X., Wang, X., Zhu, W., Wang, H., Cui, Z. (2018):
Effect of pig manure on the chemical composition and microbial diversity during co-composting with spent mushroom substrate and rice husks
Bioresour. Technol. 251 , 22 - 30
Volltext (DOI) - Newcomer, M.E., Hubbard, S.S., Fleckenstein, J.H., Maier, U., Schmidt, C., Thullner, M., Ulrich, C., Flipo, F., Rubin, Y. (2018):
Influence of hydrological perturbations and riverbed sediment characteristics on hyporheic zone respiration of CO2 and N2
J. Geophys. Res.-Biogeosci. 123 (3), 902 - 922
Volltext (DOI) - Ozbayram, E.G., Akyol, C., Ince, B., Karakoç, C., Ince, O. (2018):
Rumen bacteria at work: bioaugmentation strategies to enhance biogas production from cow manure
J. Appl. Microbiol. 124 (2), 491 - 502
Volltext (DOI) - Ozbayram, E.G., Ince, O., Ince, B., Harms, H., Kleinsteuber, S. (2018):
Comparison of rumen and manure microbiomes and implications for the inoculation of anaerobic digesters
Microorganisms 6 (1), art. 15
Volltext (DOI) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M., Ince, B., Ince, O. (2018):
Bioaugmentation of anaerobic digesters treating lignocellulosic feedstock by enriched microbial consortia
Eng. Life Sci. 18 (7), 440 - 446
Volltext (DOI) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M., Ince, B., Ince, O. (2018):
Enrichment of lignocellulose-degrading microbial communities from natural and engineered methanogenic environments
Appl. Microbiol. Biotechnol. 102 (2), 1035 - 1043
Volltext (DOI) - Peters, K., Worrich, A., Weinhold, A., Alka, O., Balcke, G., Birkemeyer, C., Bruelheide, H., Calf, O.W., Dietz, S., Dührkop, K., Gaquerel, E., Heinig, U., Kücklich, M., Macel, M., Müller, C., Poeschl, Y., Pohnert, G., Ristok, C., Rodríguez, V.M., Ruttkies, C., Schumann, M., Schweiger, R., Shahaf, N., Steinbeck, C., Tortosa, M., Treutler, H., Ueberschaar, N., Velasco, P., Weiß, B.M., Widdig, A., Neumann, S., van Dam, N.M. (2018):
Current challenges in plant eco-metabolomics
Int. J. Mol. Sci. 19 (5), art. 1385
Volltext (DOI) - Pons, S., Bindschedler, S., Sebag, D., Junier, P., Verrecchia, E., Cailleau, G. (2018):
Biocontrolled soil nutrient distribution under the influence of an oxalogenic-oxalotrophic ecosystem
Plant Soil 425 (1–2), 145 - 160
Volltext (DOI) - Pozdnyakova, N., Schlosser, D., Dubrovskaya, E., Balandina, S., Sigida, E., Grinev, V., Turkovskaya, O. (2018):
The degradative activity and adaptation potential of the litter-decomposing fungus Stropharia rugosoannulata
World J. Microbiol. Biotechnol. 34 , art. 133
Volltext (DOI) - Rodrigo Quejigo, J., Rosa, L.F.M., Harnisch, F. (2018):
Electrochemical characterization of bed electrodes using voltammetry of single granules
Electrochem. Commun. 90 , 78 - 82
Volltext (DOI) - Russel, M., Sophocleous, M., JiaJia, S., Xu, W., Xiao, L., Maskow, T., Alam, M., Georgiou, J. (2018):
High-frequency, dielectric spectroscopy for the detection of electrophysiological/biophysical differences in different bacteria types and concentrations
Anal. Chim. Acta 1028 , 86 - 95
Volltext (DOI) - Schmeller, D.S., Loyau, A., Bao, D., Brack, W., Chatzinotas, A., De Vleeschouwer, F., Friesen, J., Gandois, L., Hansson, S.V., Haver, M., Le Roux, G., Shen, J., Teisserenc, R., Vredenburg, V.T. (2018):
People, pollution and pathogens – Global change impacts in mountain freshwater ecosystems
Sci. Total Environ. 622-623 , 756 - 763
Volltext (DOI) - Schmidt, S.I., Kreft, J.-U., Mackay, R., Picioreanu, C., Thullner, M. (2018):
Elucidating the impact of micro-scale heterogeneous bacterial distribution on biodegradation
Adv. Water Resour. 116 , 67 - 76
Volltext (DOI) - Shan, Y., Harms, H., Wick, L.Y. (2018):
Electric field effects on bacterial deposition and transport in porous media
Environ. Sci. Technol. 52 (24), 14294 - 14301
Volltext (DOI) - Sharma, A., Schmidt, M., Kiesel, B., Mahato, N.K., Cralle, L., Singh, Y., Richnow, H.H., Gilbert, J.A., Arnold, W., Lal, R. (2018):
Bacterial and archaeal viruses of Himalayan hot springs at Manikaran modulate host genomes
Front. Microbiol. 9 , art. 3095
Volltext (DOI) - Sträuber, H., Bühligen, F., Kleinsteuber, S., Dittrich‐Zechendorf, M. (2018):
Carboxylic acid production from ensiled crops in anaerobic solid‐state fermentation ‐ trace elements as pH controlling agents support microbial chain elongation with lactic acid
Eng. Life Sci. 18 (7), 447 - 458
Volltext (DOI) - van Gelder, S., Röhrig, N., Schattenberg, F., Cichocki, N., Schumann, J., Schmalz, G., Haak, R., Ziebolz, D., Müller, S. (2018):
A cytometric approach to follow variation and dynamics of the salivary microbiota
Methods 134–135 , 67 - 79
Volltext (DOI) - Vásquez-Piñeros, M.A., Martínez-Lavanchy, P.M., Jehmlich, N., Pieper, D.H., Rincón, C.A., Harms, H., Junca, H., Heipieper, H.J. (2018):
Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation
BMC Microbiol. 18 , art. 108
Volltext (DOI) - Vilajeliu-Pons, A., Koch, C., Balaguer, M.D., Colprim, J., Harnisch, F., Puig, S. (2018):
Microbial electricity driven anoxic ammonium removal
Water Res. 130 , 168 - 175
Volltext (DOI) - Wintsche, B., Jehmlich, N., Popp, D., Harms, H., Kleinsteuber, S. (2018):
Metabolic adaptation of methanogens in anaerobic digesters upon trace element limitation
Front. Microbiol. 9 , art. 405
Volltext (DOI) - Xu, J., He, H., Wang, Y.-Y., Yan, R., Zhou, L.-J., Liu, Y., Jiang, F.-L., Maskow, T., Liu, Y. (2018):
New aspects of the environmental risks of quantum dots: prophage activation
Environ. Sci.-Nano 5 (7), 1556 - 1566
Volltext (DOI) - Xu, J., Jiang, F.-L., Liu, Y., Kiesel, B., Maskow, T. (2018):
An enhanced bioindicator for calorimetric monitoring of prophage-activating chemicals in the trace concentration range
Eng. Life Sci. 18 (7), 475 - 483
Volltext (DOI) - Xu, J., Kiesel, B., Kallies, R., Jiang, F.-L., Liu, Y., Maskow, T. (2018):
A fast and reliable method for monitoring of prophage-activating chemicals
Microb. Biotechnol. 11 (6), 1112 - 1120
Volltext (DOI) - Ye, F., Ma, M.-H., Op den Camp, H.J.M., Chatzinotas, A., Li, L., Lv, M.-Q., Wu, S.-J., Wang, Y. (2018):
Different recovery processes of soil ammonia oxidizers from flooding disturbance
Microb. Ecol. 76 (4), 1041 - 1052
Volltext (DOI) - Zhalnina, K., Louie, K.B., Hao, Z., Mansoori, N., Nunes da Rocha, U., Shi, S., Cho, H., Karaoz, U., Loqué, D., Bowen, B.P., Firestone, M.K., Northen, T.R., Brodie, E.L. (2018):
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
Nat. Microbiol. 3 (4), 470 - 480
Volltext (DOI) - Zimmermann, J., Durek, P., Kühl, A.A., Schattenberg, F., Maschmeyer, P., Siracusa, F., Lehmann, K., Westendorf, K., Weber, M., Riedel, R., Müller, S., Radbruch, A., Chang, H.-D. (2018):
The intestinal microbiota determines the colitis-inducing potential of T-bet-deficient Th cells in mice
Eur. J. Immunol. 48 (1), 161 - 167
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A simple method for the measurement of metabolic heat production rates during solid-state fermentations using β-carotene production with Blakeslea trispora as a model system
Eng. Life Sci. 17 (6), 620 - 628
Volltext (DOI) - Bock, C., Chatzinotas, A., Boenigk, J. (2017):
Genetic diversity in chrysophytes: Comparison of different gene markers
Fottea 17 (2), 209 - 221
Volltext (DOI) - Bonk, F., Bastidas-Oyanedel, J.-R., Yousef, A.F., Schmidt, J.E. (2017):
Exploring the selective lactic acid production from food waste in uncontrolled pH mixed culture fermentations using different reactor configurations
Bioresour. Technol. 238 , 416 - 424
Volltext (DOI) - Brown, R.K., Schmidt, U.C., Harnisch, F., Schröder, U. (2017):
Combining hydrogen evolution and corrosion data - A case study on the economic viability of selected metal cathodes in microbial electrolysis cells
J. Power Sources 356 , 473 - 483
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Guidelines for the use of flow cytometry and cell sorting in immunological studies
Eur. J. Immunol. 47 (10), 1584 - 1797
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Enhancing methane production from food waste fermentate using biochar: the added value of electrochemical testing in pre‑selecting the most effective type of biochar
Biotechnol. Biofuels 10 , art. 303
Volltext (DOI) - Dinasquet, J., Richert, I., Logares, R., Yager, P., Bertilsson, S., Riemann, L. (2017):
Mixing of water masses caused by a drifting iceberg affects bacterial activity, community composition and substrate utilization capability in the Southern Ocean
Environ. Microbiol. 19 (6), 2453 - 2467
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Soil protistology rebooted: 30 fundamental questions to start with
Soil Biol. Biochem. 111 , 94 - 103
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Introduction of a new platform for parameter estimation of kinetically complex environmental systems
Environ. Modell. Softw. 98 , 12 - 20
Volltext (DOI) - Gimkiewicz, C., Hegner, R., Gutensohn, M., Koch, C., Harnisch, F. (2017):
Study of electrochemical reduction of CO2 for future use in secondary microbial electrochemical technologies
ChemSusChem 10 (5), 958 - 967
Volltext (DOI) - Guo, Y., Baumgart, S., Stärk, H.-J., Harms, H., Müller, S. (2017):
Mass cytometry for detection of silver at the bacterial single cell level
Front. Microbiol. 8 , art. 1326
Volltext (DOI) - Guo, Y., Stärk, H.J., Hause, G., Schmidt, M., Harms, H., Wick, L.Y., Müller, S. (2017):
Heterogenic response of prokaryotes toward silver nanoparticles and ions is facilitated by phenotypes and attachment of silver aggregates to cell surfaces
Cytom. Part A 91 (8), 775 - 784
Volltext (DOI) - Harnisch, F., Schmid, J. (2017):
Editorial to special issue of Engineering in Life Sciences Emerging biotechnologies viewed by emerging bioengineers (EBEB)
Eng. Life Sci. 17 (1), 4 - 5
Volltext (DOI) - Hegner, R., Koch, C., Riechert, V., Harnisch, F. (2017):
Microbiome-based carboxylic acids production: from serum bottles to bioreactors
RSC Advances 7 (25), 15362 - 15371
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Vitamin and amino acid auxotrophy in anaerobic consortia operating under methanogenic conditions
mSystems 2 (5), e00038-17
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Effect of rhizobacterial consortia from undisturbed arid- and agro-ecosystems on wheat growth under different conditions
Lett. Appl. Microbiol. 64 (2), 158 - 163
Volltext (DOI) - Jahangiri, E., Seiwert, B., Reemtsma, T., Schlosser, D. (2017):
Laccase- and electrochemically mediated conversion of triclosan: Metabolite formation and influence on antibacterial activity
Chemosphere 168 , 549 - 558
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Optimization of semi-continuous anaerobic digestion of sugarcane straw co-digested with filter cake: Effects of macronutrients supplementation on conversion kinetics
Bioresour. Technol. 245 , 35 - 43
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Improving anaerobic digestion of sugarcane straw for methane production: combined benefits of mechanical and sodium hydroxide pretreatment for process designing
Energy Conv. Manag. 141 , 378 - 389
Volltext (DOI) - Johnke, J., Baron, M., Leeuw, M., Kushmaro, A., Jurkevitch, E., Harms, H., Chatzinotas, A. (2017):
A generalist protist predator enables coexistence in multitrophic predator-prey systems containing a phage and the bacterial predator Bdellovibrio
Front. Ecol. Evol. 5 , art. 124
Volltext (DOI) - Johnke, J., Boenigk, J., Harms, H., Chatzinotas, A. (2017):
Killing the killer: predation between protists and predatory bacteria
FEMS Microbiol. Lett. 364 (9), fnx089
Volltext (DOI) - Jousset, A., Bienhold, C., Chatzinotas, A., Gallien, L., Gobet, A., Kurm, V., Küsel, K., Rillig, M.C., Rivett, D.W., Salles, J.F., van der Heijden, M.G.A., Youssef, N.H., Zhang, X., Wei, Z., Hol, W.H.G. (2017):
Where less may be more: how the rare biosphere pulls ecosystems strings
ISME J. 11 (4), 853 - 862
Volltext (DOI) - Kallies, R., Kiesel, B., Schmidt, M., Kacza, J., Ghanem, N., Narr, A., Zopfi, J., Wick, L.Y., Hackermüller, J., Harms, H., Chatzinotas, A. (2017):
Complete genome sequence of Pseudoalteromonas phage vB_PspS-H40/1 (formerly H40/1) that infects Pseudoalteromonas sp. strain H40 and is used as biological tracer in hydrological transport studies
Stand. Genomic Sci. 12 , art. 20
Volltext (DOI) - Karakoç, C., Singer, A., Johst, K., Harms, H., Chatzinotas, A. (2017):
Transient recovery dynamics of a predator–prey system under press and pulse disturbances
BMC Ecology 17 , art. 13
Volltext (DOI) - Kleinert, F., Kallies, R., Hort, M., Zweynert, A., Szekat, C., Nagel, M., Bierbaum, G. (2017):
Influence of IS256 on genome variability and formation of small-colony variants in Staphylococcus aureus
Antimicrob. Agents Chemother. 61 (8), e00144-17
Volltext (DOI) - Koch, C., Kuchenbuch, A., Kracke, F., Bernhardt, P.V., Krömer, J.O., Harnisch, F. (2017):
Predicting and experimental evaluating bio-electrochemical synthesis — A case study with Clostridium kluyveri
Bioelectrochemistry 118 , 114 - 122
Volltext (DOI) - König, S., Worrich, A., Centler, F., Wick, L.Y., Miltner, A., Kästner, M., Thullner, M., Frank, K., Banitz, T. (2017):
Modelling functional resilience of microbial ecosystems: Analysis of governing processes
Environ. Modell. Softw. 89 , 31 - 39
Volltext (DOI) - Korth, B., Maskow, T., Günther, S., Harnisch, F. (2017):
Estimating the energy content of wastewater using combustion calorimetry and different drying processes
Front. Energy Res. 5 , art. 23
Volltext (DOI) - Kretzschmar, J., Koch, C., Liebetrau, J., Mertig, M., Harnisch, F. (2017):
Electroactive biofilms as sensor for volatile fatty acids: Cross sensitivity, response dynamics, latency and stability
Sens. Actuator B-Chem. 241 , 466 - 472
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eLatrine: lessons learned from the development of a low-tech MFC based on cardboard electrodes for the treatment of human feces
J. Electrochem. Soc. 164 (3), H3065 - H3072
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Degradation of polystyrene and selected analogues by biological Fenton chemistry approaches: opportunities and limitations
Chemosphere 173 , 520 - 528
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Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence
Microb. Cell. Fact. 16 , art. 180
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Drivers and applications of integrated clean-up technologies for surfactant-enhanced remediation of environments contaminated with polycyclic aromatic hydrocarbons (PAHs)
Environ. Pollut. 225 , 129 - 140
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A critical evaluation of ecological indices for the comparative analysis of microbial communities based on molecular datasets
FEMS Microbiol. Ecol. 93 (1), fiw209
Volltext (DOI) - Meyer-Cifuentes, I., Martinez-Lavanchy, P.M., Marin-Cevada, V., Böhnke, S., Harms, H., Müller, J.A., Heipieper, H.J. (2017):
Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model
PLOS One 12 (4), e0174750
Volltext (DOI) - Narr, A., Nawaz, A., Wick, L.Y., Harms, H., Chatzinotas, A. (2017):
Soil viral communities vary temporally and along a land use transect as revealed by virus-like particle counting and a modified community fingerprinting approach (fRAPD)
Front. Microbiol. 8 , art. 1975
Volltext (DOI) - Otto, S., Bruni, E.P., Harms, H., Wick, L.Y. (2017):
Catch me if you can: dispersal and foraging of Bdellovibrio bacteriovorus 109J along mycelia
ISME J. 11 (2), 386 - 393
Volltext (DOI) - Otto, S., Harms, H., Wick, L.Y. (2017):
Effects of predation and dispersal on bacterial abundance and contaminant biodegradation
FEMS Microbiol. Ecol. 93 (2), fiw241
Volltext (DOI) - Ozbayram, E.G., Kleinsteuber, S., Nikolausz, M., Ince, B., Ince, O. (2017):
Effect of bioaugmentation by cellulolytic bacteria enriched from sheep rumen on methane production from wheat straw
Anaerobe 46 , 122 - 130
Volltext (DOI) - Perruchon, C., Chatzinotas, A., Omirou, M., Vasileiadis, S., Menkissoglou-Spiroudi, U., Karpouzas, D.G. (2017):
Isolation of a bacterial consortium able to degrade the fungicide thiabendazole: the key role of a Sphingomonas phylotype
Appl. Microbiol. Biotechnol. 101 (9), 3881 - 3893
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Exploitation of Trametes versicolor for bioremediation of endocrine disrupting chemicals in bioreactors
PLOS One 12 (6), e0178758
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Inhibitory effect of coumarin on syntrophic fatty acid-oxidizing and methanogenic cultures and biogas reactor microbiomes
Appl. Environ. Microb. 83 (13), e00438-17
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Methane yield of biomass from extensive grassland is affected by compositional changes induced by order of arrival
GCB Bioenergy 9 (10), 1555 - 1562
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Interaction of minerals, organic matter, and microorganisms during biogeochemical interface formation as shown by a series of artificial soil experiments
Biol. Fert. Soils 53 (1), 9 - 22
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Turbulent mixing accelerates PAH desorption due to fragmentation of sediment particle aggregates
J. Soils Sediments 17 (1), 277 - 285
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Production of 2-hydroxyisobutyric acid from methanol by Methylobacterium extorquens AM1 expressing (R)-3-hydroxybutyryl coenzyme A-isomerizing enzymes
Appl. Environ. Microb. 83 (3), e02622-16
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Paving the way for bioelectrotechnology: Integrating electrochemistry into bioreactors
Eng. Life Sci. 17 (1), 77 - 85
Volltext (DOI) - Rosa, L.F.M., Koch, C., Korth, B., Harnisch, F. (2017):
Electron harvest and treatment of amendment free municipal wastewater using microbial anodes: A case study
J. Power Sources 356 , 319 - 323
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Effects of plant-symbiotic relationships on the living soil microbial community and microbial necromass in a long-term agro-ecosystem
Sci. Total Environ. 581–582 , 756 - 765
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Life electric—nature as a blueprint for the development of microbial electrochemical technologies
Joule 1 (2), 244 - 252
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Removal of dimethylphenols and ammonium in laboratory-scale horizontal subsurface flow constructed wetlands
Eng. Life Sci. 17 (12), 1224 - 1233
Volltext (DOI) - Urban, C., Harnisch, F. (2017):
Deterioration of aqueous n-octanoate electrolysis with electrolytic conductivity collapse caused by the formation of n-octanoic acid/n-octanoate agglomerates
ChemElectroChem 4 (6), 1378 - 1389
Volltext (DOI) - Urban, C., Xu, J., Sträuber, H., dos Santos Dantas, T.R., Mühlenberg, J., Härtig, C., Angenent, L.T., Harnisch, F. (2017):
Production of drop-in fuels from biomass at high selectivity by combined microbial and electrochemical conversion
Energy Environ. Sci. 10 (10), 2231 - 2244
Volltext (DOI) - Winter, M., Thürmann, L., Gu, Z., Schüürmann, G., Herberth, G., Hinz, D., von Bergen, M., Harms, H., Olek, S., Röder, S., Borte, M., Eils, R., Lehmann, I., Trump, S. (2017):
The benzene metabolite 1,4-benzoquinone reduces regulatory T-cell function: A potential mechanism for tobacco smoke–associated atopic dermatitis
J. Allergy Clin. Immunol. 140 (2), 603 - 605
Volltext (DOI) - Worrich, A., Stryhanyuk, H., Musat, N., König, S., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Richnow, H.-H., Miltner, A., Kästner, M., Wick, L.Y. (2017):
Mycelium-mediated transfer of water and nutrients stimulates bacterial activity in dry and oligotrophic environments
Nat. Commun. 8 , art. 15472
Volltext (DOI) - Zhou, Z.-Q., Yang, L.-Y., Yan, R., Zhao, J., Liu, Y.-Q., Lai, L., Jiang, F.-L., Maskow, T., Liu, Y. (2017):
Mn-Doped ZnSe quantum dots initiated mild and rapid cation exchange for tailoring the composition and optical properties of colloid nanocrystals: novel template, new applications
Nanoscale 9 (8), 2824 - 2835
Volltext (DOI)
2016 (52)
- Akyol, C., Ozbayram, E.G., Kleinsteuber, S., Ince, B. (2016):
Anaerobic co-digestion of cow manure and barley: Effect of cow manure to barley ratio on methane production and digestion stability
Environ. Prog. Sustain. Energy 35 (2), 589 - 595
Volltext (DOI) - Alvarez-Zaldívar, P., Centler, F., Maier, U., Thullner, M., Imfeld, G. (2016):
Biogeochemical modelling of in situ biodegradation and stable isotope fractionation of intermediate chloroethenes in a horizontal subsurface flow wetland
Ecol. Eng. 90 , 170 - 179
Volltext (DOI) - Banitz, T., Frank, K., Wick, L.Y., Harms, H., Johst, K. (2016):
Spatial metrics as indicators of biodegradation benefits from bacterial dispersal networks
Ecol. Indic. 60 , 54 - 63
Volltext (DOI) - Berthold, T., Centler, F., Hübschmann, T., Remer, R., Thullner, M., Harms, H., Wick, L.Y. (2016):
Mycelia as a focal point for horizontal gene transfer among soil bacteria
Sci. Rep. 6 , art. 36390
Volltext (DOI) - Brussaard, C.P.D., Peperzak, L., Beggah, S., Wick, L.Y., Wuerz, B., Weber, J., Arey, J.S., van der Burg, B., Jonas, A., Huisman, J., van der Meer, J.R. (2016):
Immediate ecotoxicological effects of short-lived oil spills on marine biota
Nat. Commun. 7 , art. 11206
Volltext (DOI) - Bühligen, F., Lucas, R., Nikolausz, M., Kleinsteuber, S. (2016):
A T-RFLP database for the rapid profiling of methanogenic communities in anaerobic digesters
Anaerobe 39 , 114 - 116
Volltext (DOI) - Chakravorty, S., Bhattacharya, S., Chatzinotas, A., Chakraborty, W., Bhattacharya, D., Gachhui, R. (2016):
Kombucha tea fermentation: Microbial and biochemical dynamics
Int. J. Food Microbiol. 220 , 63 - 72
Volltext (DOI) - Coban, H., Miltner, A., Centler, F., Kästner, M. (2016):
Effects of compost, biochar and manure on carbon mineralization of biogas residues applied to soil
Eur. J. Soil Sci. 67 (2), 217 - 225
Volltext (DOI) - de Carvalho, C.C.C.R., Fischer, M.A., Kirsten, S., Würz, B., Wick, L.Y., Heipieper, H.J. (2016):
Adaptive response of Rhodococcus opacus PWD4 to salt and phenolic stress on the level of mycolic acids
AMB Express 6 , art. 66
Volltext (DOI) - Ehlen, L., Tödtmann, J., Specht, S., Kallies, R., Papies, J., Müller, M.A., Junglen, S., Drosten, C., Eckerle, I. (2016):
Epithelial cell lines of the cotton rat (Sigmodon hispidus) are highly susceptible in vitro models to zoonotic Bunya-, Rhabdo-, and Flaviviruses
Virol. J. 13 , art. 74
Volltext (DOI) - Ghanem, N., Kiesel, B., Kallies, R., Harms, H., Chatzinotas, A., Wick, L.Y. (2016):
Marine phages as tracers: effects of size, morphology, and physico–chemical surface properties on transport in a porous medium
Environ. Sci. Technol. 50 (23), 12816 - 12824
Volltext (DOI) - Gimkiewicz, C., Hunger, S., Harnisch, F. (2016):
Evaluating the feasibility of microbial electrosynthesis based on Gluconobacter oxydans
ChemElectroChem 3 (9), 1337 - 1346
Volltext (DOI) - Grossmann, L., Beisser, D., Bock, C., Chatzinotas, A., Jensen, M., Preisfeld, A., Psenner, R., Rahmann, S., Wodniok, S., Boenigk, J. (2016):
Trade‐off between taxon diversity and functional diversity in European lake ecosystems
Mol. Ecol. 25 (23), 5876 - 5888
Volltext (DOI) - Günther, S., Faust, K., Schumann, J., Harms, H., Raes, J., Müller, S. (2016):
Species-sorting and mass-transfer paradigms control managed natural metacommunities
Environ. Microbiol. 18 (12), 4862 - 4877
Volltext (DOI) - Hofmann, J., Peltri, G., Sträuber, H., Müller, L., Schumacher, B., Müller, U., Liebetrau, J. (2016):
Statistical interpretation of semi-continuous anaerobic digestion experiments on the laboratory scale
Chem. Eng. Technol. 39 (4), 643 - 651
Volltext (DOI) - Hofmann, U., Schlosser, D. (2016):
Biochemical and physicochemical processes contributing to the removal of endocrine-disrupting chemicals and pharmaceuticals by the aquatic ascomycete Phoma sp. UHH 5-1-03
Appl. Microbiol. Biotechnol. 100 (5), 2381 - 2399
Volltext (DOI) - Jahn, M., Vorpahl, C., Hübschmann, T., Harms, H., Müller, S. (2016):
Copy number variability of expression plasmids determined by cell sorting and Droplet Digital PCR
Microb. Cell. Fact. 15 , art. 211
Volltext (DOI) - Janke, A., Leite, A., Batista, K., Weinrich, S., Sträuber, H., Nikolausz, M., Nelles, M., Stinner, W. (2016):
Optimization of hydrolysis and volatile fatty acids production from sugarcane filter cake: Effects of urea supplementation and sodium hydroxide pretreatment
Bioresour. Technol. 199 , 235 - 244
Volltext (DOI) - Janke, L., Leite, A.F., Batista, K., Silva, W., Nikolausz, M., Nelles, M., Stinner, W. (2016):
Enhancing biogas production from vinasse in sugarcane biorefineries: Effects of urea and trace elements supplementation on process performance and stability
Bioresour. Technol. 217 , 10 - 20
Volltext (DOI) - Janke, L., Leite, A.F., Nikolausz, M., Radetski, C.M., Nelles, M., Stinner, W. (2016):
Comparison of start-up strategies and process performance during semi-continuous anaerobic digestion of sugarcane filter cake co-digested with bagasse
Waste Manage. 48 , 199 - 208
Volltext (DOI) - Jeske, J.T., Müller, R.A., Wendeberg, A., Bertilsson, S. (2016):
Microscale decoupling of sediment oxygen consumption and microbial biomass in an oligotrophic lake
Freshw. Biol. 61 (9), 1477 - 1491
Volltext (DOI) - Khan, A.M., Wick, L.Y., Harms, H., Thullner, M. (2016):
Biodegradation of vapor-phase toluene in unsaturated porous media: Column experiments
Environ. Pollut. 211 , 325 - 331
Volltext (DOI) - Koch, C., Harnisch, F. (2016):
What is the essence of microbial electroactivity?
Front. Microbiol. 7 , art. 1890
Volltext (DOI) - Koch, C., Harnisch, F. (2016):
Is there a specific ecological niche for electroactive microorganisms?
ChemElectroChem 3 (9), 1282 - 1295
Volltext (DOI) - Korth, B., Maskow, T., Picioreanu, C., Harnisch, F. (2016):
The microbial electrochemical Peltier heat: an energetic burden and engineering chance for primary microbial electrochemical technologies
Energy Environ. Sci. 9 (8), 2539 - 2544
Volltext (DOI) - Kretzschmar, J., Rosa, L.F.M., Zosel, J., Mertig, M., Liebetrau, J., Harnisch, F. (2016):
A microbial biosensor platform for inline quantification of acetate in anaerobic digestion: potential and challenges
Chem. Eng. Technol. 39 (4), 637 - 642
Volltext (DOI) - Krueger, M.C., Bergmann, M., Schlosser, D. (2016):
Widespread ability of fungi to drive quinone redox cycling for biodegradation
FEMS Microbiol. Lett. 363 (11), fnw105
Volltext (DOI) - Leite, A.F., Janke, L., Harms, H., Richnow, H.-H., Nikolausz, M. (2016):
Lessons learned from the microbial ecology resulting from different inoculation strategies for biogas production from waste products of the bioethanol/sugar industry
Biotechnol. Biofuels 9 , art. 144
Volltext (DOI) - Lieder, S., Jahn, M., Koepff, J., Müller, S., Takors, R. (2016):
Environmental stress speeds up DNA replication in Pseudomonas putida in chemostat cultivations
Biotechnol. J. 11 (1), 155 - 163
Volltext (DOI) - Lünsmann, V., Kappelmeyer, U., Benndorf, R., Martínez-Lavanchy, P.M., Taubert, A., Adrian, L., Duarte, M., Pieper, D.H., von Bergen, M., Müller, J.A., Heipieper, H.J., Jehmlich, N. (2016):
In situ protein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model
Environ. Microbiol. 18 (4), 1176 - 1186
Volltext (DOI) - Mulat, D.G., Jacobi, H.F., Feilberg, A., Adamsen, A.P.S., Richnow, H.-H., Nikolausz, M. (2016):
Changing feeding regimes to demonstrate flexible biogas production: effects on process performance, microbial community structure, and methanogenesis pathways
Appl. Environ. Microb. 82 (2), 438 - 449
Volltext (DOI) - Newcomer, M.E., Hubbard, S.S., Fleckenstein, J.H., Maier, U., Schmidt, C., Thullner, M., Ulrich, C., Flipo, N., Rubin, Y. (2016):
Simulating bioclogging effects on dynamic riverbed permeability and infiltration
Water Resour. Res. 52 (4), 2883 - 2900
Volltext (DOI) - Otto, S., Banitz, T., Thullner, M., Harms, H., Wick, L.Y. (2016):
Effects of facilitated bacterial dispersal on the degradation and emission of a desorbing contaminant
Environ. Sci. Technol. 50 (12), 6320 - 6326
Volltext (DOI) - Popp, D., Harms, H., Sträuber, H. (2016):
The alkaloid gramine in the anaerobic digestion process—inhibition and adaptation of the methanogenic community
Appl. Microbiol. Biotechnol. 100 (16), 7311 - 7322
Volltext (DOI) - Rohde, M.-T., Paufler, S., Harms, H., Maskow, T. (2016):
Calorespirometric feeding control enhances bioproduction from toxic feedstocks—Demonstration for biopolymer production out of methanol
Biotechnol. Bioeng. 113 (10), 2113 - 2121
Volltext (DOI) - Saleem, M., Fetzer, I., Harms, H., Chatzinotas, A. (2016):
Trophic complexity in aqueous systems: bacterial species richness and protistan predation regulate dissolved organic carbon and dissolved total nitrogen removal
Proc. R. Soc. B-Biol. Sci. 283 (1825), art. 20152724
Volltext (DOI) - Schweigert, M., Herrmann, S., Miltner, A., Fester, T., Kästner, M. (2016):
Corrigendum to "Fate of ectomycorrhizal fungal biomass in a soil bioreactor system and its contribution to soil organic matter formation" [Soil Biol. Biogeochem. 88 (2015) 120–127]
Soil Biol. Biochem. 92 , 242
Volltext (DOI) - Stang, C., Harnisch, F. (2016):
The dilemma of supporting electrolytes for electroorganic synthesis: a case study on Kolbe electrolysis
ChemSusChem 9 (1), 50 - 60
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Pulsed 13C2-acetate protein-SIP unveils Epsilonproteobacteria as dominant acetate utilizers in a sulfate-reducing microbial community mineralizing benzene
Microb. Ecol. 71 (4), 901 - 911
Volltext (DOI) - Stefanakis, A.I., Seeger, E., Dorer, C., Sinke, A., Thullner, M. (2016):
Performance of pilot-scale horizontal subsurface flow constructed wetlands treating groundwater contaminated with phenols and petroleum derivatives
Ecol. Eng. 95 , 514 - 526
Volltext (DOI) - Steinauer, K., Chatzinotas, A., Eisenhauer, N. (2016):
Root exudate cocktails: the link between plant diversity and soil microorganisms?
Ecol. Evol. 6 (20), 7387 - 7396
Volltext (DOI) - Stolpovsky, K., Fetzer, I., van Cappellen, P., Thullner, M. (2016):
Influence of dormancy on microbial competition under intermittent substrate supply: insights from model simulations
FEMS Microbiol. Ecol. 92 (6), fiw071
Volltext (DOI) - Sträuber, H., Lucas, R., Kleinsteuber, S. (2016):
Metabolic and microbial community dynamics during the anaerobic digestion of maize silage in a two-phase process
Appl. Microbiol. Biotechnol. 100 (1), 479 - 491
Volltext (DOI) - Vila, T., Nazir, R., Rozental, S., dos Santos, G.M.P., Calixto, R.O.R., Barreto-Bergter, E., Wick, L.Y., van Elsas, J.D. (2016):
The role of hydrophobicity and surface receptors at hyphae of Lyophyllum sp. strain Karsten in the interaction with Burkholderia terrae BS001 – Implications for interactions in soil
Front. Microbiol. 7 , art. 1689
Volltext (DOI) - Wintsche, B., Glaser, K., Sträuber, H., Centler, F., Liebetrau, J., Harms, H., Kleinsteuber, S. (2016):
Trace elements induce predominance among methanogenic activity in anaerobic digestion
Front. Microbiol. 7 , art. 2034
Volltext (DOI) - Witkowski, P.T., Drexler, J.F., Kallies, R., Ličková, M., Bokorová, S., Mananga, G.D., Szemes, T., Leroy, E.M., Krüger, D.H., Drosten, C., Klempa, B. (2016):
Phylogenetic analysis of a newfound bat-borne hantavirus supports a laurasiatherian host association for ancestral mammalian hantaviruses
Infect. Genet. Evol. 41 , 113 - 119
Volltext (DOI) - Worrich, A., König, S., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Miltner, A., Wick, L.Y., Kaestner, M. (2016):
Bacterial dispersal promotes biodegradation in heterogeneous systems exposed to osmotic stress
Front. Microbiol. 7 , art. 1214
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Mycelium-like networks increase bacterial dispersal, growth, and biodegradation in a model ecosystem at various water potentials
Appl. Environ. Microb. 82 (10), 2902 - 2908
Volltext (DOI) - Zhou, S., Nikolausz, M., Zhang, J., Riya, S., Terada, A., Hosomi, M. (2016):
Variation of the microbial community in thermophilic anaerobic digestion of pig manure mixed with different ratios of rice straw
J. Biosci. Bioeng. 122 (3), 334 - 340
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Reduction of the hydraulic retention time at constant high organic loading rate to reach the microbial limits of anaerobic digestion in various reactor systems
Bioresour. Technol. 217 , 62 - 71
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Comparative analysis of methanogenic communities in different laboratory-scale anaerobic digesters
Archaea 2016 , art. 3401272
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High-resolution microbiota flow cytometry reveals dynamic colitis-associated changes in fecal bacterial composition
Eur. J. Immunol. 46 (5), 1300 - 1303
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Characterization of airborne ice-nucleation-active bacteria and bacterial fragments
Atmos. Environ. 109 , 105 - 117
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Whole cell three phase bioreactors allow for effective production of fatty acid alkyl esters derived from microalgae lipids
Fuel 144 , 25 - 32
Volltext (DOI) - Brown, R.K., Harnisch, F., Dockhorn, T., Schröder, U. (2015):
Examining sludge production in bioelectrochemical systems treating domestic wastewater
Bioresour. Technol. 198 , 913 - 917
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Chemotactic preferences govern competition and pattern formation in simulated two-strain microbial communities
Front. Microbiol. 6 , art. 40
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Electrochemistry for biofuel generation: transformation of fatty acids and triglycerides to diesel-like olefin/ether mixtures and olefins
ChemSusChem 8 (5), 886 - 893
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Electrochemistry for the generation of renewable chemicals: electrochemical conversion of levulinic acid
RSC Advances 5 (34), 26634 - 26643
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“Omics” insights into PAH degradation toward improved green remediation biotechnologies
Environ. Sci. Technol. 49 (19), 11281 - 11291
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Plant metabolite profiles and the buffering capacities of ecosystems
Phytochemistry 110 , 6 - 12
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The extent of functional redundancy changes as species’ roles shift in different environments
Proc. Natl. Acad. Sci. U.S.A. 112 (48), 14888 - 14893
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Adaptation in toxic environments: arsenic genomic islands in the bacterial genus Thiomonas
PLOS One 10 (9), e0139011
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Kinetics of substrate biodegradation under the cumulative effects of bioavailability and self-inhibition
Environ. Sci. Technol. 49 (9), 5529 - 5537
Volltext (DOI) - Glaser, K., Kuppardt, A., Boenigk, J., Harms, H., Fetzer, I., Chatzinotas, A. (2015):
The influence of environmental factors on protistan microorganisms in grassland soils along a land-use gradient
Sci. Total Environ. 537 , 33 - 42
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Use of SWATH mass spectrometry for quantitative proteomic investigation of Shewanella oneidensis MR-1 biofilms grown on graphite cloth electrodes
Syst. Appl. Microbiol. 38 , 135 - 139
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Facilitated gate setting by sequential dot plot scanning
Cytom. Part A 87 (7), 661 - 664
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Electrifying white biotechnology: engineering and economic potential of electricity-driven bio-production
ChemSusChem 8 (5), 758 - 766
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Non-random distribution of macromolecules as driving forces for phenotypic variation
Curr. Opin. Microbiol. 25 , 49 - 55
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Biogas production from sugarcane waste: assessment on kinetic challenges for process designing
Int. J. Mol. Sci. 16 (9), 20685 - 20703
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Impact of dissolved organic matter on bacterial tactic motility, attachment, and transport
Environ. Sci. Technol. 49 (7), 4498 - 4505
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Metagenome-based metabolic reconstruction revealsthe ecophysiological function of Epsilonproteobacteria in a hydrocarbon-contaminated sulfidic aquifer
Front. Microbiol. 6 , art. 1396
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Environmental microbiology: Revisiting the physiology of microorganisms on the single cell scale. Editorial overview
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Coupling electric energy and biogas production in anaerobic digesters – impacts on the microbiome
RSC Advances 5 (40), 31329 - 31340
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A framework for modeling electroactive microbial biofilms performing direct electron transfer
Bioelectrochemistry 106 , 194 - 206
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Duodenal microbiota is not the origin for bacterial translocation in liver cirrhosis
J. Hepatol. 62 (Suppl. 2), S372
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Prospects for microbiological solutions to environmental pollution with plastics
Appl. Microbiol. Biotechnol. 99 (1), 8857 - 8874
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Potential of wood-rotting fungi to attack polystyrene sulfonate and its depolymerisation by Gloeophyllum trabeum via hydroquinone-driven Fenton chemistry
PLOS One 10 (7), e0131773
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Structural basis of the stereospecificity of bacterial B12-dependent 2-hydroxyisobutyryl-CoA mutase
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Assessment of the variations in characteristics and methane potential of major waste products from the Brazilian bioethanol industry along an operating season
Energy Fuels 29 (7), 4022 - 4029
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Improved monitoring of semi-continuous anaerobic digestion of sugarcane waste: effects of increasing organic loading rate on methanogenic community dynamics
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Variability in subpopulation formation propagates into biocatalytic variability of engineered Pseudomonas putida strains
Front. Microbiol. 6 , art. 1042
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Long-term monitoring reveals stable and remarkably similar microbial communities in parallel full-scale biogas reactors digesting energy crops
FEMS Microbiol. Ecol. 91 (3), fiv004
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Microbial toluene removal in hypoxic model constructed wetlands occurs predominantly via the ring monooxygenation pathway
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What does calorimetry and thermodynamics of living cells tell us?
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Cytometric patterns reveal growth states of Shewanella putrefaciens
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Laccase-like enzyme activities from chlorophycean green algae with potential for bioconversion of phenolic pollutants
FEMS Microbiol. Lett. 362 (11), fnv072
Volltext (DOI) - Pfeiffer, M., Batbayar, G., Hofmann, J., Siegfried, K., Karthe, D., Hahn-Tomer, S. (2015):
Investigating arsenic (As) occurrence and sources in ground, surface, waste and drinking water in northern Mongolia
Environ. Earth Sci. 73 (2), 649 - 662
Volltext (DOI) - Popp, D., Schrader, S., Kleinsteuber, S., Harms, H., Sträuber, H. (2015):
Biogas production from coumarin-rich plants—inhibition by coumarin and recovery by adaptation of the bacterial community
FEMS Microbiol. Ecol. 91 (9), fiv103
Volltext (DOI) - Porsch, K., Wirth, B., Tóth, E.M., Schattenberg, F., Nikolausz, M. (2015):
Characterization of wheat straw-degrading anaerobic alkali-tolerant mixed cultures from soda lake sediments by molecular and cultivation techniques
Microb. Biotechnol. 8 (5), 801 - 814
Volltext (DOI) - Pous, N., Koch, C., Vilà-Rovira, A., Balaguer, M.D., Colprim, J., Mühlenberg, J., Müller, S., Harnisch, F., Puig, S. (2015):
Monitoring and engineering reactor microbiomes of denitrifying bioelectrochemical systems
RSC Advances 5 (84), 68326 - 68333
Volltext (DOI) - Pradhan, A., Seena, S., Schlosser, D., Gerth, K., Helm, S., Dobritzsch, M., Krauss, G.-J., Dobritzsch, D., Pascoal, C., Cássio, F. (2015):
Fungi from metal-polluted streams may have high ability to cope with the oxidative stress induced by copper oxide nanoparticles
Environ. Toxicol. Chem. 34 (4), 923 - 930
Volltext (DOI) - Przybylski, D., Rohwerder, T., Dilßner, C., Maskow, T., Harms, H., Müller, R.H. (2015):
Exploiting mixtures of H2, CO2, and O2 for improved production of methacrylate precursor 2-hydroxyisobutyric acid by engineered Cupriavidus necator strains
Appl. Microbiol. Biotechnol. 99 (5), 2131 - 2145
Volltext (DOI) - Qin, J., Moustafa, A., Harms, H., El-Din, M.G., Wick, L.Y. (2015):
The power of power: electrokinetic control of PAH interactions with exfoliated graphite
J. Hazard. Mater. 288 , 25 - 33
Volltext (DOI) - Qin, J., Sun, X., Liu, Y., Berthold, T., Harms, H., Wick, L.Y. (2015):
Electrokinetic control of bacterial deposition and transport
Environ. Sci. Technol. 49 (9), 5663 - 5671
Volltext (DOI) - Richter, S., Fetzer, I., Thullner, M., Centler, F., Dittrich, P. (2015):
Towards rule-based metabolic databases: a requirement analysis based on KEGG
Int. J. Data Min. Bioinform. 13 (3), 289 - 319
Volltext (DOI) - Rödiger, S., Burdukiewicz, M., Blagodatskikh, K., Jahn, M., Schierack, P. (2015):
R as an environment for the reproducible analysis of DNA amplification experiments
R Journal 7 (1), 127 - 150
Volltext (URL) - Schkolnik, G., Schmidt, M., Mazza, M.G., Harnisch, F., Musat, N. (2015):
In situ analysis of a silver nanoparticle-precipitating Shewanella biofilm by surface enhanced confocal Raman microscopy
PLOS One 10 (12), e0145871
Volltext (DOI) - Schröder, U., Harnisch, F., Angenent, L.T. (2015):
Microbial electrochemistry and technology: terminology and classification
Energy Environ. Sci. 8 (2), 513 - 519
Volltext (DOI) - Schweigert, M., Herrmann, S., Miltner, A., Fester, T., Kästner, M. (2015):
Fate of ectomycorrhizal fungal biomass in a soil bioreactor system and its contribution to soil organic matter formation
Soil Biol. Biochem. 88 , 120 - 127
Volltext (DOI) - Shamim, S., Rehman, A. (2015):
Antioxidative enzyme profiling and biosorption ability of Cupriavidus metallidurans CH34 and Pseudomonas putida mt2 under cadmium stress
J. Basic Microbiol. 55 (3), 374 - 381
Volltext (DOI) - Shan, Y., Song, Y., Liu, Y., Liu, R., Du, J., Zeng, P. (2015):
Adsorption of berberine by polymeric resin H103: kinetics and thermodynamics
Environ. Earth Sci. 73 (9), 4989 - 4994
Volltext (DOI) - Siegfried, K., Hahn-Tomer, S., Koelsch, A., Osterwalder, E., Mattusch, J., Stärk, H.-J., Meichtry, M., De Seta, E.G., Reina, F.D., Panigatti, C., Litter, M.I., Harms, H. (2015):
Introducing simple detection of bioavailable arsenic at Rafaela (Santa Fe Province, Argentina) using the ARSOlux biosensor
Int. J. Environ. Res. Public Health 12 (5), 5465 - 5482
Volltext (DOI) - Simon, A., Bindschedler, S., Job, D., Wick, L.Y., Filippidou, S., Kooli, W.M., Verrecchia, E.P., Junier, P. (2015):
Exploiting the fungal highway: development of a novel tool for the in situ isolation of bacteria migrating along fungal mycelium
FEMS Microbiol. Ecol. 91 (11), fiv116
Volltext (DOI) - Stasik, S., Wick, L.Y., Wendt-Potthoff, K. (2015):
Anaerobic BTEX degradation in oil sands tailings ponds: impact of labile organic carbon and sulfate-reducing bacteria
Chemosphere 138 , 133 - 139
Volltext (DOI) - Steinbach, A., Schulz, S., Giebler, J., Schulz, S., Pronk, G.J., Kögel-Knabner, I., Harms, H., Wick, L.Y., Schloter, M. (2015):
Clay minerals and metal oxides strongly influence the structure of alkane-degrading microbial communities during soil maturation
ISME J. 9 (7), 1687 - 1691
Volltext (DOI) - Wei, M., Harnisch, F., Vogt, C., Ahlheim, J., Neu, T.R., Richnow, H.H. (2015):
Harvesting electricity from benzene and ammonium-contaminated groundwater using a microbial fuel cell with an aerated cathode
RSC Advances 5 (7), 5321 - 5330
Volltext (DOI) - Wei, M., Rakoczy, J., Vogt, C., Harnisch, F., Schumann, R., Richnow, H.H. (2015):
Enhancement and monitoring of pollutant removal in a constructed wetland by microbial electrochemical technology
Bioresour. Technol. 196 , 490 - 499
Volltext (DOI) - Weichler, M.-T., Kurteva-Yaneva, N., Przybylski, D., Schuster, J., Müller, R.H., Harms, H., Rohwerder, T. (2015):
Thermophilic coenzyme B12-dependent acyl-coenzyme A (CoA) mutase from Kyrpidia tusciae DSM 2912 preferentially catalyzes isomerization of (R)-3-hydroxybutyryl- and 2-hydroxyisobutyryl-CoA
Appl. Environ. Microb. 81 (14), 4564 - 4572
Volltext (DOI) - Witkowski, P.T., Kallies, R., Hoveka, J., Auste, B., Ithete, N.I., Šoltys, K., Szemes, T., Drosten, C., Preiser, W., Klempa, B., Mfune, J.K.E., Kruger, D.H. (2015):
Novel arenavirus isolates from Namaqua rock mice, Namibia, Southern Africa
Emerg. Infect. Dis. 21 (7), 1213 - 1216
Volltext (DOI) - Zimmermann, M., Escrig, S., Hübschmann, T., Kirf, M.K., Brand, A., Inglis, R.F., Musat, N., Müller, S., Meibom, A., Ackermann, M., Schreiber, F. (2015):
Phenotypic heterogeneity in metabolic traits among single cells of a rare bacterial species in its natural environment quantified with a combination of flow cell sorting and NanoSIMS
Front. Microbiol. 6 , art. 243
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2014 (51)
- Banitz, T., Johst, K., Wick, L.Y., Schamfuß, S., Harms, H., Frank, K. (2014):
Corrigendum: Highways versus pipelines: contributions of two fungal transport mechanisms to efficient bioremediation (vol 5, pg 211, 2013)
Environ. Microbiol. Rep. 6 (4), 414 - 414
Volltext (DOI) - Bosch, J., Lee, K.-Y., Hong, S.-F., Harnisch, F., Schröder, U., Meckenstock, R.U. (2014):
Metabolic efficiency of Geobacter sulfurreducens growing on anodes with different redox potentials
Curr. Microbiol. 68 (6), 763 - 768
Volltext (DOI) - Bozinovski, D., Taubert, M., Kleinsteuber, S., Richnow, H.-H., von Bergen, M., Vogt, C., Seifert, J. (2014):
Metaproteogenomic analysis of a sulfate-reducing enrichment culture reveals genomic organization of key enzymes in the m-xylene degradation pathway and metabolic activity of proteobacteria
Syst. Appl. Microbiol. 37 (7), 488 - 501
Volltext (DOI) - Brown, R.K., Harnisch, F., Wirth, S., Wahlandt, H., Dockhorn, T., Dichtl, N., Schröder, U. (2014):
Evaluating the effects of scaling up on the performance of bioelectrochemical systems using a technical scale microbial electrolysis cell
Bioresour. Technol. 163 , 206 - 213
Volltext (DOI) - Bühligen, F., Lindner, P., Fetzer, I., Stahl, F., Scheper, T., Harms, H., Müller, S. (2014):
Analysis of aging in lager brewing yeast during serial repitching
J. Biotechnol. 187 , 60 - 70
Volltext (DOI) - Cailleau, G., Mota, M., Bindschedler, S., Junier, P., Verrecchia, E.P. (2014):
Detection of active oxalate–carbonate pathway ecosystems in the Amazon Basin: Global implications of a natural potential C sink
Catena 116 , 132 - 141
Volltext (DOI) - Dorer, C., Vogt, C., Kleinsteuber, S., Stams, A.J.M., Richnow, H.-H. (2014):
Compound-specific isotope analysis as a tool to characterize biodegradation of ethylbenzene
Environ. Sci. Technol. 48 (16), 9122 - 9132
Volltext (DOI) - Fester, T., Giebler, J., Wick, L.Y., Schlosser, D., Kästner, M. (2014):
Plant–microbe interactions as drivers of ecosystem functions relevant for the biodegradation of organic contaminants
Curr. Opin. Biotechnol. 27 , 168 - 175
Volltext (DOI) - Fester, T., Merbach, I., Schulz, E., Härtig, C. (2014):
Metabolic response of Medicago sativa to severe nutrient imbalances and disturbances under field conditions
J. Plant Nutr. Soil Sci. 177 (2), 245 - 259
Volltext (DOI) - Gharasoo, M., Centler, F., Fetzer, I., Thullner, M. (2014):
How the chemotactic characteristics of bacteria can determine their population patterns
Soil Biol. Biochem. 69 , 346 - 358
Volltext (DOI) - Giebler, J., Wick, L.Y., Harms, H., Chatzinotas, A. (2014):
Evaluating T-RFLP protocols to sensitively analyze the genetic diversity and community changes of soil alkane degrading bacteria
Eur. J. Soil Biol. 65 , 107 - 113
Volltext (DOI) - Glaser, K., Kuppardt, A., Krohn, S., Heidtmann, A., Harms, H., Chatzinotas, A. (2014):
Primer pairs for the specific environmental detection and T-RFLP analysis of the ubiquitous flagellate taxa Chrysophyceae and Kinetoplastea
J. Microbiol. Methods 100 , 8 - 16
Volltext (DOI) - Gros, J., Nabi, D., Würz, B., Wick, L.Y., Brussaard, C.P.D., Huisman, J., van der Meer, J.R., Reddy, C.M., Arey, J.S. (2014):
First day of an oil spill on the open sea: Early mass transfers of hydrocarbons to air and water
Environ. Sci. Technol. 48 (16), 9400 - 9411
Volltext (DOI) - Harms, H., Junca, H. (2014):
Editorial overview: Environmental Biotechnology
Curr. Opin. Biotechnol. 27 , vii - ix
Volltext (DOI) - Heße, F., Prykhodko, V., Attinger, S., Thullner, M. (2014):
Assessment of the impact of pore-scale mass-transfer restrictions on microbially-induced stable-isotope fractionation
Adv. Water Resour. 74 , 79 - 90
Volltext (DOI) - Heße, F., Prykhodko, V., Attinger, S., Thullner, M. (2014):
Corrigendum to “Assessment of the impact of pore-scale mass-transfer restrictions on microbially-induced stable-isotope fractionation” [ADWR 74C (2014) 79–90]
Adv. Water Resour. 74 , 329
Volltext (DOI) - Hoffmann, P., Held, C., Maskow, T., Sadowski, G. (2014):
A thermodynamic investigation of the glucose-6-phosphate isomerization
Biophys. Chem. 195 , 22 - 31
Volltext (DOI) - Jahangiri, E., Reichelt, S., Thomas, I., Hausmann, K., Schlosser, D., Schulze, A. (2014):
Electron beam-induced immobilization of laccase on porous supports for waste water treatment applications
Molecules 19 (8), 11860 - 11882
Volltext (DOI) - Jahn, M., Vorpahl, C., Türkowsky, D., Lindmeyer, M., Bühler, B., Harms, H., Müller, S. (2014):
Accurate determination of plasmid copy number of flow-sorted cells using droplet digital PCR
Anal. Chem. 86 (12), 5969 - 5976
Volltext (DOI) - Jahn, M., Vorpahl, C., Türkowsky, D., Lindmeyer, M., Bühler, B., Harms, H., Müller, S. (2014):
Population heterogeneity in Pseudomonas putida analyzed on the single cell level using proteomics and digital PCR
New Biotech. 31 (Suppl.), S58 - S59
Volltext (DOI) - Johnke, J., Cohen, Y., de Leeuw, M., Kushmaro, A., Jurkevitch, E., Chatzinotas, A. (2014):
Multiple micro-predators controlling bacterial communities in the environment
Curr. Opin. Biotechnol. 27 , 185 - 190
Volltext (DOI) - Kallies, R., Kopp, A., Zirkel, F., Estrada, A., Gillespie, T.R., Drosten, C., Junglen, S. (2014):
Genetic characterization of Goutanap virus, a novel virus related to Negeviruses, Cileviruses and Higreviruses
Viruses 6 (11), 4346 - 4357
Volltext (DOI) - Koch, C., Harms, H., Müller, S. (2014):
Dynamics in the microbial cytome — single cell analytics in natural systems
Curr. Opin. Biotechnol. 27 , 134 - 141
Volltext (DOI) - Koch, C., Harnisch, F., Schröder, U., Müller, S. (2014):
Cytometric fingerprints: evaluation of new tools for analyzing microbial community dynamics
Front. Microbiol. 5 , art. 273
Volltext (DOI) - Koch, C., Müller, S., Harms, H., Harnisch, F. (2014):
Microbiomes in bioenergy production: From analysis to management
Curr. Opin. Biotechnol. 27 , 65 - 72
Volltext (DOI) - Koch, C., Popiel, D., Harnisch, F. (2014):
Functional redundancy of microbial anodes fed by domestic wastewater
ChemElectroChem 1 (11), 1923 - 1931
Volltext (DOI) - Krohn, S., Böhm, S., Engelmann, C., Hartmann, J., Brodzinski, A., Chatzinotas, A., Zeller, K., Prywerek, D., Fetzer, I., Berg, A. (2014):
Application of qualitative and quantitative real-time PCR, direct sequencing, and terminal restriction fragment length polymorphism analysis for detection and identification of polymicrobial 16S rRNA genes in ascites
J. Clin. Microbiol. 52 (5), 1754 - 1757
Volltext (DOI) - Kuppardt, A., Kleinsteuber, S., Vogt, C., Lüders, T., Harms, H., Chatzinotas, A. (2014):
Phylogenetic and functional diversity within toluene-degrading, sulphate-reducing consortia enriched from a contaminated aquifer
Microb. Ecol. 68 (2), 222 - 234
Volltext (DOI) - Lauterböck, B., Nikolausz, M., Lv, Z., Baumgartner, A., Liebhard, G., Fuchs, W. (2014):
Improvement of anaerobic digestion performance by continuous nitrogen removal with a membrane contactor treating a substrate rich in ammonia and sulfide
Bioresour. Technol. 158 , 209 - 216
Volltext (DOI) - Lentendu, G., Wubet, T., Chatzinotas, A., Wilhelm, C., Buscot, F., Schlegel, M. (2014):
Effects of long term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
Mol. Ecol. 23 (13), 3341 - 3355
Volltext (DOI) - Lieder, S., Jahn, M., Seifert, J., von Bergen, M., Müller, S., Takors, R. (2014):
Subpopulation-proteomics reveal growth rate, but not cell cycling, as a major impact on protein composition in Pseudomonas putida KT2440
AMB Express 4 , art. 71
Volltext (DOI) - Lv, Z., Hu, M., Harms, H., Richnow, H.H., Liebetrau, J., Nikolausz, M. (2014):
Stable isotope composition of biogas allows early warning of complete process failure as a result of ammonia inhibition in anaerobic digesters
Bioresour. Technol. 167 , 251 - 259
Volltext (DOI) - Lv, Z., Leite, A.F., Harms, H., Richnow, H.H., Liebetrau, J., Nikolausz, M. (2014):
Influences of the substrate feeding regime on methanogenic activity in biogas reactors approached by molecular and stable isotope methods
Anaerobe 29 , 91 - 99
Volltext (DOI) - Maskow, T., Morais, F.M., Rosa, L.F.M., Qian, Y.G., Harnisch, F. (2014):
Insufficient oxygen diffusion leads to distortions of microbial growth parameters assessed by isothermal microcalorimetry
RSC Advances 4 (62), 32730 - 32737
Volltext (DOI) - Morais, F.M., Buchholz, F., Hartmann, T., Lerchner, J., Neu, T.R., Kiesel, B., Harms, H., Maskow, T. (2014):
Chip-calorimetric monitoring of biofilm eradication with bacteriophages reveals an unexpected infection-related heat profile
J. Therm. Anal. Calorim. 115 (3), 2203 - 2210
Volltext (DOI) - Otto, B., Schlosser, D. (2014):
First laccase in green algae: purification and characterization of an extracellular phenol oxidase from Tetracystis aeria
Planta 240 (6), 1225 - 1236
Volltext (DOI) - Porsch, K., Rijal, M.L., Borch, T., Troyer, L.D., Behrens, S., Wehland, F., Appel, E., Kappler, A. (2014):
Impact of organic carbon and iron bioavailability on the magnetic susceptibility of soils
Geochim. Cosmochim. Acta 128 , 44 - 57
Volltext (DOI) - Poser, A., Vogt, C., Knöller, K., Ahlheim, J., Weiss, H., Kleinsteuber, S., Richnow, H.-H. (2014):
Stable sulfur and oxygen isotope fractionation of anoxic sulfide oxidation by two different enzymatic pathways
Environ. Sci. Technol. 48 (16), 9094 - 9102
Volltext (DOI) - Pous, N., Koch, C., Colprim, J., Puig, S., Harnisch, F. (2014):
Extracellular electron transfer of biocathodes: Revealing the potentials for nitrate and nitrite reduction of denitrifying microbiomes dominated by Thiobacillus sp.
Electrochem. Commun. 49 , 93 - 97
Volltext (DOI) - Pradhan, A., Seena, S., Dobritzsch, D., Helm, S., Gerth, K., Dobritzsch, M., Krauss, G.-J., Schlosser, D., Pascoal, C., Cássio, F. (2014):
Physiological responses to nanoCuO in fungi from non-polluted and metal-polluted streams
Sci. Total Environ. 466–467 , 556 - 563
Volltext (DOI) - Salthammer, T., Harnisch, F. (2014):
Die Chemie bei Breaking Bad: Entstehung einer Publikation und ihre Resonanz
Chem. unserer Zeit 48 (4), 242 - 243
Volltext (DOI) - Schamfuß, S., Neu, T.R., Harms, H., Wick, L.Y. (2014):
A whole cell bioreporter approach to assess transport and bioavailability of organic contaminants in water unsaturated systems
J. Vis. Exp. 94 , e52334
Volltext (DOI) - Schmidt, T., Ziganshin, A.M., Nikolausz, M., Scholwin, F., Nelles, M., Kleinsteuber, S., Pröter, J. (2014):
Effects of the reduction of the hydraulic retention time to 1.5 days at constant organic loading in CSTR, ASBR, and fixed-bed reactors - Performance and methanogenic community composition
Biomass Bioenerg. 69 , 241 - 248
Volltext (DOI) - Shamim, S., Rehman, A. (2014):
Physicochemical surface properties of Cupriavidus metallidurans CH34 and Pseudomonas putida mt2 under cadmium stress
J. Basic Microbiol. 54 (4), 306 - 314
Volltext (DOI) - Shamim, S., Rehman, A., Qazi, M.H. (2014):
Swimming, swarming, twitching, and chemotactic responses of Cupriavidus metallidurans CH34 and Pseudomonas putida mt2 in the presence of cadmium
Arch. Environ. Contam. Toxicol 66 (3), 407 - 414
Volltext (DOI) - Shamim, S., Rehman, A., Qazi, M.H. (2014):
Cadmium-resistance mechanism in the bacteria Cupriavidus metallidurans CH34 and Pseudomonas putida mt2
Arch. Environ. Contam. Toxicol 67 (2), 149 - 157
Volltext (DOI) - Singh, S., Harms, H., Schlosser, D. (2014):
Screening of ecologically diverse fungi for their potential to pretreat lignocellulosic bioenergy feedstock
Appl. Microbiol. Biotechnol. 98 (7), 3355 - 3370
Volltext (DOI) - Wentrup, C., Wendeberg, A., Schimak, M., Borowski, C., Dubilier, N. (2014):
Forever competent: deep-sea bivalves are colonized by their chemosynthetic symbionts throughout their lifetime
Environ. Microbiol. 16 (12), 3699 - 3713
Volltext (DOI) - Wetzel, K., Silva, G., Matczinski, U., Oehl, F., Fester, T. (2014):
Superior differentiation of arbuscular mycorrhizal fungal communities from till and no-till plots by morphological spore identification when compared to T-RFLP
Soil Biol. Biochem. 72 , 88 - 96
Volltext (DOI) - Yoon, H., Leibeling, S., Zhang, C., Müller, R.H., Werth, C.J., Zilles, J.L. (2014):
Adaptation of Delftia acidovorans for degradation of 2,4-dichlorophenoxyacetate in a microfluidic porous medium
Biodegradation 25 (4), 595 - 604
Volltext (DOI) - Zhang, N., Bashir, S., Qin, J., Schindelka, J., Fischer, A., Nijenhuis, I., Herrmann, H., Wick, L.Y., Richnow, H.H. (2014):
Compound specific stable isotope analysis (CSIA) to characterize transformation mechanisms of α-hexachlorocyclohexane
J. Hazard. Mater. 280 , 750 - 757
Volltext (DOI)
2013 (54)
- Allan, E., Bossdorf, O., Dormann, C.F., Prati, D., Gossner, M.M., Tscharntke, T., Blüthgen, N., Bellach, M., Birkhofer, K., Boch, S., Böhm, S., Börschig, C., Chatzinotas, A., Christ, S., Daniel, R., Diekötter, T., Fischer, C., Friedl, T., Glaser, K., Hallmann, C., Hodac, L., Hölzel, N., Jung, K., Klein, A.M., Klaus, V.H., Kleinebecker, T., Krauss, J., Lange, M., Morris, E.K., Müller, J., Nacke, H., Pašalić, E., Rillig, M.C., Rothenwöhrer, C., Schall, P., Scherber, C., Schulze, W., Socher, S.A., Steckel, J., Steffan-Dewenter, I., Türke, M., Weiner, C.N., Werner, M., Westphal, C., Wolters, V., Wubet, T., Gockel, S., Gorke, M., Hemp, A., Renner, S.C., Schöning, I., Pfeiffer, S., König-Ries, B., Buscot, F., Linsenmair, K.E., Schulze, E.-D., Weisser, W.W., Fischer, M. (2013):
Interannual variation in land-use intensity enhances grassland multidiversity
Proc. Natl. Acad. Sci. U.S.A. 111 (1), 308 - 313
Volltext (DOI) - Banitz, T., Johst, K., Wick, L.Y., Schamfuß, S., Harms, H., Frank, K. (2013):
Highways versus pipelines: contributions of two fungal transport mechanisms to efficient bioremediation
Environ. Microbiol. Rep. 5 (2), 211 - 218
Volltext (DOI) - Beketov, M.A., Cedergreen, N., Wick, L.Y., Kattwinkel, M., Duquesne, S., Liess, M. (2013):
Sediment toxicity testing for prospective risk assessment - a new framework and how to establish it
Hum. Ecol. Risk Assess. 19 (1), 98 - 117
Volltext (DOI) - Bravo, D., Cailleau, G., Bindschedler, S., Simon, A., Job, D., Verrecchia, E., Junier, P. (2013):
Isolation of oxalotrophic bacteria able to disperse on fungal mycelium
FEMS Microbiol. Lett. 348 (2), 157 - 166
Volltext (DOI) - Bühligen, F., Rüdinger, P., Fetzer, I., Stahl, F., Scheper, T., Harms, H., Müller, S. (2013):
Sustainability of industrial yeast serial repitching practice studied by gene expression and correlation analysis
J. Biotechnol. 168 (4), 718 - 728
Volltext (DOI) - Carmona-Martínez, A.A., Harnisch, F., Kuhlicke, U., Neu, T.R., Schröder, U. (2013):
Electron transfer and biofilm formation of Shewanella putrefaciens as function of anode potential
Bioelectrochemistry 93 , 23 - 29
Volltext (DOI) - Centler, F., Heße, F., Thullner, M. (2013):
Estimating pathway-specific contributions to biodegradation in aquifers based on dual isotope analysis: theoretical analysis and reactive transport simulations
J. Contam. Hydrol. 152 , 97 - 116
Volltext (DOI) - Chatzinotas, A., Schellenberger, S., Glaser, K., Kolb, S. (2013):
Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil
Appl. Environ. Microb. 79 (18), 5777 - 5781
Volltext (DOI) - De Biase, C., Carminati, A., Oswald, S.E., Thullner, M. (2013):
Numerical modeling analysis of VOC removal processes in different aerobic vertical flow systems for groundwater remediation
J. Contam. Hydrol. 154 , 53 - 69
Volltext (DOI) - Dennis, P.G., Harnisch, F., Yeoh, Y.K., Tyson, G.W., Rabaey, K. (2013):
Dynamics of cathode-associated microbial communities and metabolite profiles in a glycerol-fed bioelectrochemical system
Appl. Environ. Microb. 79 (13), 4008 - 4014
Volltext (DOI) - Engelmann, C., Prywerek, D., Krohn, S., Boehlig, A., Herber, A., Chatzinotas, A., Fetzer, I., Boehm, S., Berg, T. (2013):
Bacterial DNA detection in ascites fluid in cirrhotic patients: molecular characterisation and clinical impact
Hepatology 58 (S1), 866A
Volltext (DOI) - Fester, T. (2013):
Arbuscular mycorrhizal fungi in a wetland constructed for benzene-, methyl tert-butyl ether- and ammonia-contaminated groundwater bioremediation
Microb. Biotechnol. 6 (1), 80 - 84
Volltext (DOI) - Fester, T., Fetzer, I., Härtig, C. (2013):
A core set of metabolite sink/source ratios indicative for plant organ productivity in Lotus japonicus
Planta 237 (1), 145 - 160
Volltext (DOI) - Giebler, J., Wick, L.Y., Chatzinotas, A., Harms, H. (2013):
Alkane-degrading bacteria at the soil–litter interface: comparing isolates with T-RFLP-based community profiles
FEMS Microbiol. Ecol. 86 (1), 45 - 58
Volltext (DOI) - Giebler, J., Wick, L.Y., Schloter, M., Harms, H., Chatzinotas, A. (2013):
Evaluating the assignment of alkB terminal restriction fragments and sequence types to distinct bacterial taxa
Appl. Environ. Microb. 79 (9), 3129 - 3132
Volltext (DOI) - Gimkiewicz, C., Harnisch, F. (2013):
Waste water derived electroactive microbial biofilms: growth, maintenance, and basic characterization
J. Vis. Exp. 82 , e50800
Volltext (DOI) - Harnisch, F., Blei, I., dos Santos, T.R., Möller, M., Nilges, P., Eilts, P., Schröder, U. (2013):
From the test-tube to the test-engine: assessing the suitability of prospective liquid biofuel compounds
RSC Advances 3 (25), 9594 - 9605
Volltext (DOI) - Harnisch, F., Salthammer, T. (2013):
Die Chemie bei Breaking Bad: ein Chemiker als Serienprotagonist. Chemistry in Breaking Bad: a chemist starring a series
Chem. unserer Zeit 47 (4), 214 - 221
Volltext (DOI) - Hartmann, T., Mühling, M., Wolf, A., Mariana, F., Maskow, T., Mertens, F., Neu, T.R., Lerchner, J. (2013):
A chip-calorimetric approach to the analysis of Ag nanoparticle caused inhibition and inactivation of beads-grown bacterial biofilms
J. Microbiol. Methods 95 (2), 129 - 137
Volltext (DOI) - Jahn, M., Mölle, A., Rödel, G., Ostermann, K. (2013):
Temporal and spatial properties of a yeast multi-cellular amplification system based on signal molecule diffusion
Sensors 13 (11), 14511 - 14522
Volltext (DOI) - Jahn, M., Seifert, J., von Bergen, M., Schmid, A., Bühler, B., Müller, S. (2013):
Subpopulation-proteomics in prokaryotic populations
Curr. Opin. Biotechnol. 24 (1), 79 - 87
Volltext (DOI) - Koch, C., Fetzer, I., Harms, H., Müller, S. (2013):
CHIC—an automated approach for the detection of dynamic variations in complex microbial communities
Cytom. Part A 83 (6), 561 - 567
Volltext (DOI) - Koch, C., Fetzer, I., Schmidt, T., Harms, H., Müller, S. (2013):
Monitoring functions in managed microbial systems by cytometric bar coding
Environ. Sci. Technol. 47 (3), 1753 - 1760
Volltext (DOI) - Koch, C., Günther, S., Desta, A.F., Hübschmann, T., Müller, S. (2013):
Cytometric fingerprinting for analyzing microbial intracommunity structure variation and identifying subcommunity function
Nat. Protoc. 8 (1), 190 - 202
Volltext (DOI) - Kruger, M.C., Bertin, P.N., Heipieper, H.J., Arsène-Ploetze, F. (2013):
Bacterial metabolism of environmental arsenic—mechanisms and biotechnological applications
Appl. Microbiol. Biotechnol. 97 (9), 3827 - 3841
Volltext (DOI) - Leibeling, S., Maeß, M.B., Centler, F., Kleinsteuber, S., von Bergen, M., Thullner, M., Harms, H., Müller, R.H. (2013):
Posttranslational oxidative modification of (R)-2-(2,4-dichlorophenoxy)propionate/α-ketoglutarate-dependent dioxygenases (RdpA) leads to improved degradation of 2,4-dichlorophenoxyacetate (2,4-D)
Eng. Life Sci. 13 (3), 278 - 291
Volltext (DOI) - Lentendu, G., Hübschmann, T., Müller, S., Dunker, S., Buscot, F., Wilhelm, C. (2013):
Recovery of soil unicellular eukaryotes: an efficiency and activity analysis on the single cell level
J. Microbiol. Methods 95 (3), 463 - 469
Volltext (DOI) - Mariana, F., Buchholz, F., Lerchner, J., Neu, T.R., Harms, H., Maskow, T. (2013):
Chip-calorimetric monitoring of biofilm eradication with antibiotics provides mechanistic information
Int. J. Med. Microbiol. 303 (3), 158 - 165
Volltext (DOI) - Maskow, T. (2013):
Calorimetry and biothermodynamics for biotechnology, medicine and environmental sciences: current status and advances
Eng. Life Sci. 13 (6), 508 - 509
Volltext (DOI) - Mehlig, L., Petzold, M., Heder, C., Günther, S., Müller, S., Eschenhagen, M., Röske, I., Röske, K. (2013):
Biodiversity of polyphosphate accumulating bacteria in eight WWTPs with different modes of operation
J. Environ. Eng.-ASCE 139 (8), 1089 - 1098
Volltext (DOI) - Möller, M., Harnisch, F., Schröder, U. (2013):
Hydrothermal liquefaction of cellulose in subcritical water—the role of crystallinity on the cellulose reactivity
RSC Advances 3 (27), 11035 - 11044
Volltext (DOI) - Müller, S., Hiller, K. (2013):
From multi-omics to basic structures of biological systems
Curr. Opin. Biotechnol. 24 (1), 1 - 3
Volltext (DOI) - Naether, D., Slawtschew, S., Stasik, S., Engel, M., Olzog, M., Wick, L.Y., Timmis, K.N., Heipieper, H.J. (2013):
Adaptation of hydrocarbonoclastic Alcanivorax borkumensis SK2 to alkanes and toxic organic compounds - a physiological and transcriptomic approach
Appl. Environ. Microb. 79 (14), 4282 - 4293
Volltext (DOI) - Neumeyer, A., Hübschmann, T., Müller, S., Frunzke, J. (2013):
Monitoring of population dynamics of Corynebacterium glutamicum by multiparameter flow cytometry
Microb. Biotechnol. 6 (2), 157 - 167
Volltext (DOI) - Nick, H.M., Raoof, A., Centler, F., Thullner, M., Regnier, P. (2013):
Reactive dispersive contaminant transport in coastal aquifers: Numerical simulation of a reactive Henry problem
J. Contam. Hydrol. 145 , 90 - 104
Volltext (DOI) - Nikolausz, M., Walter, R.F.H., Sträuber, H., Liebetrau, J., Schmidt, T., Kleinsteuber, S., Bratfisch, F., Günther, U., Richnow, H.H. (2013):
Evaluation of stable isotope fingerprinting techniques for the assessment of the predominant methanogenic pathways in anaerobic digesters
Appl. Microbiol. Biotechnol. 97 (5), 2251 - 2262
Volltext (DOI) - Paufler, S., Weichler, M.-T., Harms, H., Maskow, T. (2013):
Simple improvement of the sensitivity of a heat flux reaction calorimeter to monitor bioprocesses with weak heat production
Thermochim. Acta 569 , 71 - 77
Volltext (DOI) - Perner, M., Petersen, J.M., Zielinski, F., Gennerich, H.H., Seifert, R. (2013):
Geochemical constraints on the diversity and activity of H2-oxidizing microorganisms in diffuse hydrothermal fluids from a basalt- and an ultramafic-hosted vent
FEMS Microbiol. Ecol. 85 (1), 210 - 210
Volltext (DOI) - Pion, M., Bshary, R., Bindschedler, S., Filippidou, S., Wick, L.Y., Job, D., Junier, P. (2013):
Gains of bacterial flagellar motility in a fungal world
Appl. Environ. Microb. 79 (22), 6862 - 6867
Volltext (DOI) - Pion, M., Spangenberg, J.E., Simon, A., Bindschedler, S., Flury, C., Chatelain, A., Bshary, R., Job, D., Junier, P. (2013):
Bacterial farming by the fungus Morchella crassipes
Proc. R. Soc. B-Biol. Sci. 280 (1773), art. 20132242
Volltext (DOI) - Przybylski, D., Rohwerder, T., Harms, H., Yaneva, N., Müller, R.H. (2013):
Synthesis of the building block 2-hydroxyisobutyrate from fructose and butyrate by Cupriavidus necator H16
Appl. Microbiol. Biotechnol. 97 (20), 8875 - 8885
Volltext (DOI) - Regestein, L., Maskow, T., Tack, A., Knabben, I., Wunderlich, M., Lerchner, J., Büchs, J. (2013):
Non-invasive online detection of microbial lysine formation in stirred tank bioreactors by using calorespirometry
Biotechnol. Bioeng. 110 (5), 1386 - 1395
Volltext (DOI) - Regnier, P., Friedlingstein, P., Ciais, P., Mackenzie, F.T., Gruber, N., Janssens, I.A., Laruelle, G.G., Lauerwald, R., Luyssaert, S., Andersson, A.J., Arndt, S., Arnosti, C., Borges, A.V., Dale, A.W., Gallego-Sala, A., Goddéris, Y., Goossens, N., Hartmann, J., Heinze, C., Ilyina, T., Joos, F., LaRowe, D.E., Leifeld, J., Meysman, F.J.R., Munhoven, G., Raymond, P.A., Spahni, R., Suntharalingam, P., Thullner, M. (2013):
Anthropogenic perturbation of the carbon fluxes from land to ocean
Nat. Geosci. 6 (8), 597 - 606
Volltext (DOI) - Ricken, B., Corvini, P.F.X., Cichocka, D., Parisi, M., Lenz, M., Wyss, D., Martínez-Lavanchy, P.M., Müller, J.A., Shahgaldian, P., Tulli, L.G., Kohler, H.-P.E., Kolvenbach, B.A. (2013):
ipso-hydroxylation and subsequent fragmentation: a novel microbial strategy to eliminate sulfonamide antibiotics
Appl. Environ. Microb. 79 (18), 5550 - 5558
Volltext (DOI) - Rohwerder, T., Müller, R.H., Weichler, M.T., Schuster, J., Hübschmann, T., Müller, S., Harms, H. (2013):
Cultivation of Aquincola tertiaricarbonis L108 on the fuel oxygenate intermediate tert-butyl alcohol induces aerobic anoxygenic photosynthesis at extremely low feeding rates
Microbiology-(UK) 159 (10), 2180 - 2190
Volltext (DOI) - Saleem, M., Fetzer, I., Harms, H., Chatzinotas, A. (2013):
Diversity of protists and bacteria determines predation performance and stability
ISME J. 7 (10), 1912 - 1921
Volltext (DOI) - Schamfuß, S., Neu, T.R., van der Meer, J.R., Tecon, R., Harms, H., Wick, L.Y. (2013):
Impact of mycelia on the accessibility of fluorene to PAH-degrading bacteria
Environ. Sci. Technol. 47 (13), 6908 - 6915
Volltext (DOI) - Schuster, J., Purswani, J., Breuer, U., Pozo, C., Harms, H., Müller, R.H., Rohwerder, T. (2013):
Constitutive expression of the cytochrome P450 EthABCD monooxygenase system enables degradation of synthetic dialkyl ethers in aquincola tertiaricarbonis L108
Appl. Environ. Microb. 79 (7), 2321 - 2327
Volltext (DOI) - Thullner, M., Fischer, A., Richnow, H.-H., Wick, L.Y. (2013):
Influence of mass transfer on stable isotope fractionation
Appl. Microbiol. Biotechnol. 97 (2), 441 - 452
Volltext (DOI) - Tischer, K., Kleinsteuber, S., Schleinitz, K.M., Fetzer, I., Spott, O., Stange, F., Lohse, U., Franz, J., Neumann, F., Gerling, S., Schmidt, C., Hasselwander, E., Harms, H., Wendeberg, A. (2013):
Microbial communities along biogeochemical gradients in a hydrocarbon-contaminated aquifer
Environ. Microbiol. 15 (9), 2603 - 2615
Volltext (DOI) - Vogel, A., Fester, T., Eisenhauer, N., Scherer-Lorenzen, M., Schmid, B., Weisser, W.W., Weigelt, A. (2013):
Separating drought effects from roof artifacts on ecosystem processes in a grassland drought experiment
PLOS One 8 (8), e70997
Volltext (DOI) - Wagner, A., Segler, L., Kleinsteuber, S., Sawers, G., Smidt, H., Lechner, U. (2013):
Regulation of reductive dehalogenase gene transcription in Dehalococcoides mccartyi
Philos. Trans. R. Soc. B-Biol. Sci. 368 (1616), 20120317
Volltext (DOI) - Wentrup, C., Wendeberg, A., Huang, J.Y., Borowski, C., Dubilier, N. (2013):
Shift from widespread symbiont infection of host tissues to specific colonization of gills in juvenile deep-sea mussels
ISME J. 7 (6), 1244 - 1247
Volltext (DOI) - Ziganshin, A.M., Liebetrau, J., Pröter, J., Kleinsteuber, S. (2013):
Microbial community structure and dynamics during anaerobic digestion of various agricultural waste materials
Appl. Microbiol. Biotechnol. 97 (11), 5161 - 5174
Volltext (DOI)
2012 (38)
- Banitz, T., Johst, K., Wick, L.Y., Fetzer, I., Harms, H., Frank, K. (2012):
The relevance of conditional dispersal for bacterial colony growth and biodegradation
Microb. Ecol. 63 (2), 339 - 347
Volltext (DOI) - Baumgarten, T., Sperling, S., Seifert, J., von Bergen, M., Steiniger, F., Wick, L.Y., Heipieper, H.J. (2012):
Membrane vesicle formation as a multiple-stress response mechanism enhances Pseudomonas putida DOT-T1E cell surface hydrophobicity and biofilm formation
Appl. Environ. Microb. 78 (17), 6217 - 6224
Volltext (DOI) - Baumgarten, T., Vazquez, J.R., Bastisch, C., Veron, W., Feuilloley, M.G.J., Nietzsche, S., Wick, L.Y., Heipieper, H.J. (2012):
Alkanols and chlorophenols cause different physiological adaptive responses on the level of cell surface properties and membrane vesicle formation in Pseudomonas putida DOT-T1E
Appl. Microbiol. Biotechnol. 93 (2), 837 - 845
Volltext (DOI) - Buchholz, F., Lerchner, J., Mariana, F., Kuhlicke, U., Neu, T.R., Harms, H., Maskow, T. (2012):
Chip-calorimetry provides real time insights into the inactivation of biofilms by predatory bacteria
Biofouling 28 (3), 351 - 362
Volltext (DOI) - Czekalski, N., Berthold, T., Caucci, S., Egli, A., Bürgmann, H. (2012):
Increased levels of multiresistant bacteria and resistance genes after wastewater treatment and their dissemination into Lake Geneva, Switzerland
Front. Microbiol. 3 , art. 106
Volltext (DOI) - De Biase, C., Maier, U., Baeder-Bederski, O., Bayer, P., Oswald, S., Thullner, M. (2012):
Removal of volatile organic compounds in vertical flow filters: predictions from reactive transport modeling
Ground Water Monit. Remediat. 32 (2), 106 - 121
Volltext (DOI) - Donose, B.C., Harnisch, F., Taran, E. (2012):
Electrochemically produced hydrogen bubbleprobes for gas evolution kinetics and force spectroscopy
Electrochem. Commun. 24 , 21 - 24
Volltext (DOI) - Flach, K., Hilbrich, I., Schiffmann, A., Gärtner, U., Krüger, M., Leonhardt, M., Waschipky, H., Wick, L., Arendt, T., Holzer, M. (2012):
Tau oligomers impair artificial membrane integrity and cellular viability
J. Biol. Chem. 287 (52), 43223 - 43233
Volltext (DOI) - Furuno, S., Foss, S., Wild, E., Jones, K.C., Semple, K.T., Harms, H., Wick, L.Y. (2012):
Mycelia promote active transport and spatial dispersion of polycyclic aromatic hydrocarbons
Environ. Sci. Technol. 46 (10), 5463 - 5470
Volltext (DOI) - Furuno, S., Remer, R., Chatzinotas, A., Harms, H., Wick, L.Y. (2012):
Use of mycelia as paths for the isolation of contaminant-degrading bacteria from soil
Microb. Biotechnol. 5 (1), 142 - 148
Volltext (DOI) - Gharasoo, M., Centler, F., Regnier, P., Harms, H., Thullner, M. (2012):
A reactive transport modeling approach to simulate biogeochemical processes in pore structures with pore-scale heterogeneities
Environ. Modell. Softw. 30 (1), 102 - 114
Volltext (DOI) - Günther, S., Koch, C., Hübschmann, T., Röske, I., Müller, R., Bley, T., Harms, H., Müller, S. (2012):
Correlation of community dynamics and process parameters as a tool for the prediction of the stability of wastewater treatment
Environ. Sci. Technol. 46 (1), 84 - 92
Volltext (DOI) - Hanzel, J., Thullner, M., Harms, H., Wick, L.Y. (2012):
Walking the tightrope of bioavailability: growth dynamics of PAH degraders on vapour-phase PAH
Microb. Biotechnol. 5 (1), 79 - 86
Volltext (DOI) - Hommes, G., Gasser, C.A., Howald, C.B.C., Goers, R., Schlosser, D., Shahgaldian, P., Corvini, P.F.-X. (2012):
Production of a robust nanobiocatalyst for municipal wastewater treatment
Bioresour. Technol. 115 (July 2012), 8 - 15
Volltext (DOI) - Jimenez-Sanchez, C., Wick, L.Y., Ortega-Calvo, J.-J. (2012):
Chemical effectors cause different motile behavior and deposition of bacteria in porous media
Environ. Sci. Technol. 46 (12), 6790 - 6797
Volltext (DOI) - Junghanns, C., Neumann, J.F., Schlosser, D. (2012):
Application of the aquatic fungus Phoma sp. (DSM22425) in bioreactors for the treatment of textile dye model effluents
J. Chem. Technol. Biotechnol. 87 (9), 1276 - 1283
Volltext (DOI) - Kalbacher, T., Delfs, J.-O., Shao, H., Wang, W., Walther, M., Samaniego, L., Schneider, C., Kumar, R., Musolff, A., Centler, F., Sun, F., Hildebrandt, A., Liedl, R., Borchardt, D., Krebs, P., Kolditz, O. (2012):
The IWAS-ToolBox: software coupling for an integrated water resources management
Environ. Earth Sci. 65 (5), 1367 - 1380
Volltext (DOI) - Kleinsteuber, S., Schleinitz, K.M., Vogt, C. (2012):
Key players and team play: anaerobic microbial communities in hydrocarbon-contaminated aquifers
Appl. Microbiol. Biotechnol. 94 (4), 851 - 873
Volltext (DOI) - Krohn, S., Hartmann, J., Brodzinski, A., Chatzinotas, A., Böhm, S., Berg, T. (2012):
Identification of polybacterial 16S RRNA genes from ascitic fluids with T-RFLP analysis and direct sequencing
J. Hepatol. 56 (Suppl. 2), S266 - S266
Volltext (DOI) - Libardi jr., N., Gern, R.M.M., Furlan, S.A., Schlosser, D. (2012):
Laccase production by the aquatic ascomycete Phoma sp. UHH 5-1-03 and the white rot basidiomycete Pleurotus ostreatus DSM 1833 during submerged cultivation on banana peels and enzyme applicability for the removal of endocrine-disrupting chemicals
Appl. Biochem. Biotechnol. 167 (5), 1144 - 1156
Volltext (DOI) - Maskow, T., Wolf, K., Kunze, W., Enders, S., Harms, H. (2012):
Rapid analysis of bacterial contamination of tap water using isothermal calorimetry
Thermochim. Acta 543 , 273 - 280
Volltext (DOI) - Müller, S., Hübschmann, T., Kleinsteuber, S., Vogt, C. (2012):
High resolution single cell analytics to follow microbial community dynamics in anaerobic ecosystems
Methods 57 (3), 338 - 349
Volltext (DOI) - Regestein, L., Wolf, A., Schneider, H.-J., Maskow, T., Mertens, F., Büchs, J., Lerchner, J. (2012):
A chip calorimeter for the monitoring of conventional bioreactors at elevated cell concentrations
Thermochim. Acta 544 , 10 - 16
Volltext (DOI) - Reinhold, A., Westermann, M., Seifert, J., von Bergen, M., Schubert, T., Diekert, G. (2012):
Impact of vitamin B12 on the formation of the tetrachloroethene reductive dehalogenase in Desulfitobacterium hafniense strain Y51
Appl. Environ. Microb. 78 (22), 8025 - 8032
Volltext (DOI) - Rosell, M., Gonzalez-Olmos, R., Rohwerder, T., Rusevova, K., Georgi, A., Kopinke, F.-D., Richnow, H.H. (2012):
Critical evaluation of the 2D-CSIA scheme for distinguishing fuel oxygenate degradation reaction mechanisms
Environ. Sci. Technol. 46 (9), 4757 - 4766
Volltext (DOI) - Saleem, M., Fetzer, I., Dormann, C.F., Harms, H., Chatzinotas, A. (2012):
Predator richness increases the effect of prey diversity on prey yield
Nat. Commun. 3 , art. 1305
Volltext (DOI) - Schäfer, F., Schuster, J., Würz, B., Härtig, C., Harms, H., Müller, R.H., Rohwerder, T. (2012):
Synthesis of short-chain diols and unsaturated alcohols from secondary alcohol substrates by the Rieske nonheme mononuclear iron oxygenase MdpJ
Appl. Environ. Microb. 78 (17), 6280 - 6284
Volltext (DOI) - Schulz, S., Giebler, J., Chatzinotas, A., Wick, L.Y., Fetzer, I., Welzl, G., Harms, H., Schloter, M. (2012):
Plant litter and soil type drive abundance, activity and community structure of alkB harbouring microbes in different soil compartments
ISME J. 6 (9), 1763 - 1774
Volltext (DOI) - Schulz, S., Yuyunkina, T., Pagel, H., Wick, L.Y., Poll, C., Streck, T., Kandeler, E., Schloter, M. (2012):
The influence of the herbicide 2-methyl-4-chlorophenoxyacetic acid (MCPA) on the mineralization of litter-derived alkanes and the abundance of the alkane monooxygenase gene (alkB) in the detritusphere of Pisum sativum (L.)
Biol. Fert. Soils 48 (8), 933 - 940
Volltext (DOI) - Schuster, J., Schäfer, F., Hübler, N., Brandt, A., Rosell, M., Härtig, C., Harms, H., Müller, R.H., Rohwerder, T. (2012):
Bacterial degradation of tert-amyl alcohol proceeds via hemiterpene 2-methyl-3-buten-2-ol by employing the tertiary alcohol desaturase function of the Rieske nonheme mononuclear iron oxygenase MdpJ
J. Bacteriol. 194 (5), 972 - 981
Volltext (DOI) - Siegfried, K., Endes, C., Bhuiyan, A.F.M.K., Kuppardt, A., Mattusch, J., van der Meer, J.R., Chatzinotas, A., Harms, H. (2012):
Field testing of arsenic in groundwater samples of Bangladesh using a test kit based on lyophilized bioreporter bacteria
Environ. Sci. Technol. 46 (6), 3281 - 3287
Volltext (DOI) - Solé, M., Müller, I., Pecyna, M.J., Fetzer, I., Harms, H., Schlosser, D. (2012):
Differential regulation by organic compounds and heavy metals of multiple laccase genes in the aquatic hyphomycete Clavariopsis aquatica
Appl. Environ. Microb. 78 (13), 4732 - 4739
Volltext (DOI) - Stolpovsky, K., Gharasoo, M., Thullner, M. (2012):
The impact of pore-size heterogeneities on the spatiotemporal variation of microbial metabolic activity in porous media
Soil Sci. 177 (2), 98 - 110
Volltext (DOI) - Taubert, M., Vogt, C., Wubet, T., Kleinsteuber, S., Tarkka, M.T., Harms, H., Buscot, F., Richnow, H.-H., von Bergen, M., Seifert, J. (2012):
Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium
ISME J. 6 (12), 2291 - 2301
Volltext (DOI) - Thullner, M., Centler, F., Richnow, H.-H., Fischer, A. (2012):
Quantification of organic pollutant degradation in contaminated aquifers using compound specific stable isotope analysis – Review of recent developments
Org. Geochem. 42 (12), 1440 - 1460
Volltext (DOI) - Tischer, K., Zeder, M., Klug, R., Pernthaler, J., Schattenhofer, M., Harms, H., Wendeberg, A. (2012):
Fluorescence in situ hybridization (CARD-FISH) of microorganisms in hydrocarbon contaminated aquifer sediment samples
Syst. Appl. Microbiol. 35 (8), 526 - 532
Volltext (DOI) - Wendeberg, A., Zielinski, F.U., Borowski, C., Dubilier, N. (2012):
Expression patterns of mRNAs for methanotrophy and thiotrophy in symbionts of the hydrothermal vent mussel Bathymodiolus puteoserpentis
ISME J. 6 (1), 104 - 112
Volltext (DOI) - Yaneva, N., Schuster, J., Schäfer, F., Lede, V., Przybylski, D., Paproth, T., Harms, H., Müller, R.H., Rohwerder, T. (2012):
Bacterial acyl-CoA mutase specifically catalyzes coenzyme B12-dependent isomerization of 2-hydroxyisobutyryl-CoA and (S)-3-hydroxybutyryl-CoA
J. Biol. Chem. 287 (19), 15502 - 15511
Volltext (DOI)
2011 (35)
- Banitz, T., Fetzer, I., Johst, K., Wick, L.Y., Harms, H., Frank, K. (2011):
Assessing biodegradation benefits from dispersal networks
Ecol. Model. 222 (14), 2552 - 2560
Volltext (DOI) - Banitz, T., Wick, L.Y., Fetzer, I., Frank, K., Harms, H., Johst, K. (2011):
Dispersal networks for enhancing bacterial degradation in heterogeneous environments
Environ. Pollut. 159 (10), 2781 - 2788
Volltext (DOI) - Centler, F., Fetzer, I., Thullner, M. (2011):
Modeling population patterns of chemotactic bacteria in homogenous porous media
J. Theor. Biol. 287 , 82 - 91
Volltext (DOI) - Ciudad, G., Reyes, I., Azócar, L., Briones, R., Jorquera, M., Wick, L.Y., Navia, R. (2011):
Innovative approaches for effective selection of lipase-producing microorganisms as whole cell catalysts for biodiesel production
New Biotech. 28 (4), 375 - 381
Volltext (DOI) - Ciudad, G., Reyes, I., Jorquera, M.A., Azócar, L., Wick, L.Y., Navia, R. (2011):
Novel three-phase bioreactor concept for fatty acid alkyl ester production using R. oryzae as whole cell catalyst
World J. Microbiol. Biotechnol. 27 (11), 2505 - 2512
Volltext (DOI) - De Biase, C., Reger, D., Schmidt, A., Jechalke, S., Reiche, N., Martínez-Lavanchy, P.M., Rosell, M., van Afferden, M., Maier, U., Oswald, S.E., Thullner, M. (2011):
Treatment of volatile organic contaminants in a vertical flow filter: relevance of different removal processes
Ecol. Eng. 37 (9), 1292 - 1303
Volltext (DOI) - Fester, T., Fetzer, I., Buchert, S., Lucas, R., Rillig, M., Härtig, C. (2011):
Towards a systemic metabolic signature of the arbuscular mycorrhizal interaction
Oecologia 167 (4), 913 - 924
Volltext (DOI) - Fester, T., Sawers, R. (2011):
Progress and challenges in agricultural applications of arbuscular mycorrhizal fungi
Crit. Rev. Plant Sci. 30 (5), 459 - 470
Volltext (DOI) - Girardi, C., Greve, J., Lamshöft, M., Fetzer, I., Miltner, A., Schäffer, A., Kästner, M. (2011):
Biodegradation of ciprofloxacin in water and soil and its effects on the microbial communities
J. Hazard. Mater. 198 , 22 - 30
Volltext (DOI) - Gröbe, G., Ullrich, R., Pecyna, M.J., Kapturska, D., Friedrich, S., Hofrichter, M., Scheibner, K. (2011):
High-yield production of aromatic peroxygenase by the agaric fungus Marasmius rotula
AMB Express 1 , art. 31
Volltext (DOI) - Hahn-Tomer, S. (2011):
ARSOlux® – Biosensor basierend auf Bioreporter-Bakterien zur Detektion von Arsen im Trinkwasser. It introduces itself ARSOlux (R) - Biosensor based on a bioreporter bacteria for the detection of arsenic in drinking water
Grundwasser 16 (2), 133 - 134
Volltext (DOI) - Hanzel, J., Thullner, M., Harms, H., Wick, L.Y. (2011):
Microbial growth with vapor-phase substrate
Environ. Pollut. 159 (4), 858 - 864
Volltext (DOI) - Harms, H., Schlosser, D., Wick, L.Y. (2011):
Untapped potential: exploiting fungi in bioremediation of hazardous chemicals
Nat. Rev. Microbiol. 9 (3), 177 - 192
Volltext (DOI) - Harnisch, F., Koch, C., Patil, S.A., Hübschmann, T., Müller, S., Schröder, U. (2011):
Revealing the electrochemically driven selection in natural community derived microbial biofilms using flow-cytometry
Energy Environ. Sci. (4), 1265 - 1267
Volltext (DOI) - Jechalke, S., Rosell, M., Martínez-Lavanchy, P.M., Pérez-Leiva, P., Rohwerder, T., Vogt, C., Richnow, H.H. (2011):
Linking low-level stable isotope fractionation to expression of the cytochrome P450 monooxygenase-encoding ethB gene for elucidation of methyl tert-butyl ether biodegradation in aerated treatment pond systems
Appl. Environ. Microb. 77 (3), 1086 - 1096
Volltext (DOI) - Krauss, G.-J., Solé, M., Krauss, G., Schlosser, D., Wesenberg, D., Bärlocher, F. (2011):
Fungi in freshwaters: ecology, physiology and biochemical potential
FEMS Microbiol. Rev. 35 (4), 620 - 651
Volltext (DOI) - Macherius, A., Kuschk, P., Haertig, C., Moeder, M., Shtemenko, N.I., Bayona, A.H., Heredia Guerrero, J.A., Gey, M. (2011):
Composition changes in the cuticular surface lipids of the helophytes Phragmites australis and Juncus effusus as result of pollutant exposure
Environ. Sci. Pollut. Res. 18 (5), 727 - 733
Volltext (DOI) - Martínez-Lavanchy, P.M., Dohrmann, A.B., Imfeld, G., Trescher, K., Tebbe, C.C., Richnow, H.-H., Nijenhuis, I. (2011):
Detection of monochlorobenzene metabolizing bacteria under anoxic conditions by DNA-stable isotope probing
Biodegradation 22 (5), 973 - 982
Volltext (DOI) - Maskow, T., Schubert, T., Wolf, A., Buchholz, F., Regestein, L., Buechs, J., Mertens, F., Harms, H., Lerchner, J. (2011):
Potentials and limitations of miniaturized calorimeters for bioprocess monitoring
Appl. Microbiol. Biotechnol. 92 (1), 55 - 66
Volltext (DOI) - Oroszi, S., Jakob, T., Wilhelm, C., Harms, H., Maskow, T. (2011):
Photosynthetic energy conversion in the diatom Phaeodactylum tricornutum. Measuring by calorimetry, oxygen evolution and pulse-amplitude modulated fluorescence
J. Therm. Anal. Calorim. 104 (1), 223 - 231
Volltext (DOI) - Patil, S.A., Harnisch, F., Koch, C., Hübschmann, T., Fetzer, I., Carmona-Martínez, A.A., Müller, S., Schröder, U. (2011):
Electroactive mixed culture derived biofilms in microbial bioelectrochemical systems: the role of pH on biofilm formation, performance and composition
Bioresour. Technol. 102 (20), 9683 - 9690
Volltext (DOI) - Petersen, J.M., Zielinski, F.U., Pape, T., Seifert, R., Moraru, C., Amann, R., Hourdez, S., Girguis, P.R., Wankel, S.D., Barbe, V., Pelletier, E., Fink, D., Borowski, C., Bach, W., Dubilier, N. (2011):
Hydrogen is an energy source for hydrothermal vent symbioses
Nature 476 (7359), 176 - 180
Volltext (DOI) - Rakoczy, J., Schleinitz, K.M., Müller, N., Richnow, H.H., Vogt, C. (2011):
Effects of hydrogen and acetate on benzene mineralisation under sulphate-reducing conditions
FEMS Microbiol. Ecol. 77 (2), 238 - 247
Volltext (DOI) - Sander, S.G., Hunter, K.A., Harms, H., Wells, M. (2011):
Numerical approach to speciation and estimation of parameters used in modeling trace metal bioavailability
Environ. Sci. Technol. 45 (15), 6388 - 6395
Volltext (DOI) - Schäfer, F., Muzica, L., Schuster, J., Treuter, N., Rosell, M., Harms, H., Müller, R.H., Rohwerder, T. (2011):
Formation of alkenes via degradation of tert-alkyl ethers and alcohols by Aquincola tertiaricarbonis L108 and Methylibium spp.
Appl. Environ. Microb. 77 (17), 5981 - 5987
Volltext (DOI) - Schattenhofer, M., Wulf, J., Kostadinov, I., Glöckner, F.O., Zubkov, M.V., Fuchs, B.M. (2011):
Phylogenetic characterisation of picoplanktonic populations with high and low nucleic acid content in the North Atlantic Ocean
Syst. Appl. Microbiol. 34 (6), 470 - 475
Volltext (DOI) - Schäwe, R., Fetzer, I., Tönniges, A., Härtig, C., Geyer, W., Harms, H., Chatzinotas, A. (2011):
Evaluation of FT-IR spectroscopy as a tool to quantify bacteria in binary mixed cultures
J. Microbiol. Methods 86 (2), 182 - 187
Volltext (DOI) - Smith, K.E.C., Thullner, M., Wick, L.Y., Harms, H. (2011):
Dissolved organic carbon enhances the mass transfer of hydrophobic organic compounds from nonaqueous phase liquids (NAPLs) into the aqueous phase
Environ. Sci. Technol. 45 (20), 8741 - 8747
Volltext (DOI) - Stolpovsky, K., Martínez-Lavanchy, P.M., Heipieper, H.J., van Cappellen, P., Thullner, M. (2011):
Incorporating dormancy in dynamic microbial community models
Ecol. Model. 222 (17), 3092 - 3102
Volltext (DOI) - Trutnau, M., Petzold, M., Mehlig, L., Eschenhagen, M., Geipel, K., Müller, S., Bley, T., Röske, I. (2011):
Using a carbon-based ASM3 EAWAG Bio-P for modelling the enhanced biological phosphorus removal in anaerobic/aerobic activated sludge systems
Bioprocess. Biosyst. Eng. 34 (3), 287 - 295
Volltext (DOI) - Valet, G., Endl, E., Müller, S. (2011):
20 years of the German Society for Cytometry: past and future concepts
Cytom. Part A 79A (11), 891 - 893
Volltext (DOI) - van Afferden, M., Rahman, K.Z., Mosig, P., De Biase, C., Thullner, M., Oswalt, P., Müller, R.A. (2011):
Remediation of groundwater contaminated with MTBE and benzene: the potential of vertical-flow soil filter systems
Water Res. 45 (16), 5063 - 5074
Volltext (DOI) - Vogt, C., Kleinsteuber, S., Richnow, H.H. (2011):
Anaerobic benzene degradation by bacteria
Microb. Biotechnol. 4 (6), 710 - 724
Volltext (DOI) - Zielinski, F., Gennerich, H.H., Borowski, C., Wenzhöfer, F., Dubilier, N. (2011):
In situ measurements of hydrogen sulfide, oxygen, and temperature in diffuse fluids of an ultramafic-hosted hydrothermal vent field (Logatchev, 14°45'N, Mid-Atlantic Ridge): implications for chemosymbiotic bathymodiolin mussels
Geochem. Geophys. Geosyst. 12 (9), 1 - 21
Volltext (DOI) - Ziganshin, A.M., Schmidt, T., Scholwin, F., Il'inskaya, O.N., Harms, H., Kleinsteuber, S. (2011):
Bacteria and archaea involved in anaerobic digestion of distillers grains with solubles
Appl. Microbiol. Biotechnol. 89 (6), 2039 - 2052
Volltext (DOI)
2010 (50)
- Bombach, P., Chatzinotas, A., Neu, T.R., Kästner, M., Lueders, T., Vogt, C. (2010):
Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques
FEMS Microbiol. Ecol. 71 (2), 237 - 246
Volltext (DOI) - Buchholz, F., Harms, H., Maskow, T. (2010):
Biofilm research using calorimetry - a marriage made in heaven?
Biotechnol. J. 5 (12), 1339 - 1350
Volltext (DOI) - Buchholz, F., Wolf, A., Lerchner, J., Mertens, F., Harms, H., Maskow, T. (2010):
Chip calorimetry for fast and reliable evaluation of bactericidal and bacteriostatic treatments of biofilms
Antimicrob. Agents Chemother. 54 (1), 312 - 319
Volltext (DOI) - Centler, F., Kaleta, C., Speroni di Fenizio, P., Dittrich, P. (2010):
A parallel algorithm to compute chemical organizations in biological networks
Bioinformatics 26 (14), 1788 - 1789
Volltext (DOI) - Centler, F., Shao, H., De Biase, C., Park, C.-H., Regnier, P., Kolditz, O., Thullner, M. (2010):
GeoSysBRNS-A flexible multidimensional reactive transport model for simulating biogeochemical subsurface processes
Comput. Geosci. 36 (3), 397 - 405
Volltext (DOI) - Deepthike, H.U., Tecon, R., van Kooten, G.K., van der Meer, J.R., Harms, H., Wells, M., Short, J. (2010):
Response to comment on "Unlike PAHs from Exxon Valdez Crude Oil, PAHs from Gulf of Alaska Coals are not Readily Bioavailable"
Environ. Sci. Technol. 44 (6), 2212 - 2213
Volltext (DOI) - Duldhardt, I., Gaebel, J., Chrzanowski, Ł., Nijenhuis, I., Schauer, F., Heipieper, H.J. (2010):
Adaptation of anaerobically grown Thauera aromatica, Geobacter sulfurreducens and Desulfococcus multivorans to organic solvents on the level of membrane fatty acid composition
Microb. Biotechnol. 3 (2), 201 - 209
Volltext (DOI) - Findening, B.M., Chatzinotas, A., Boenigk, J. (2010):
Taxonomic and ecological characterization of stomatocysts of Spumella-like flagellates (Chrysophyceae)
J. Phycol. 46 (5), 868 - 881
Volltext (DOI) - Foit, K., Chatzinotas, A., Liess, M. (2010):
Short-term disturbance of a grazer has long-term effects on bacterial communities-Relevance of trophic interactions for recovery from pesticide effects
Aquat. Toxicol. 99 (2), 205 - 211
Volltext (DOI) - Furuno, S., Päzolt, K., Rabe, C., Neu, T.R., Harms, H., Wick, L.Y. (2010):
Fungal mycelia allow chemotactic dispersal of polycyclic aromatic hydrocarbon-degrading bacteria in water-unsaturated systems
Environ. Microbiol. 12 (6), 1391 - 1398
Volltext (DOI) - Galliker, P., Hommes, G., Schlosser, D., Corvini, P.F.-X., Shahgaldian, P. (2010):
Laccase-modified silica nanoparticles efficiently catalyze the transformation of phenolic compounds
J. Colloid Interface Sci. 349 (1), 98 - 105
Volltext (DOI) - Hanzel, J., Harms, H., Wick, L. (2010):
Bacterial chemotaxis along vapor-phase gradients of naphthalene
Environ. Sci. Technol. 44 (24), 9304 - 9310
Volltext (DOI) - Herrmann, S., Kleinsteuber, S., Chatzinotas, A., Kuppardt, A., Lueders, T., Richnow, H.H., Vogt, C. (2010):
Functional characterization of an anaerobic benzene-degrading enrichment culture by DNA stable isotope probing
Environ. Microbiol. 12 (2), 401 - 411
Volltext (DOI) - Hesse, F., Harms, H., Attinger, S., Thullner, M. (2010):
Linear exchange model for the description of mass transfer limited bioavailability at the pore scale
Environ. Sci. Technol. 44 (6), 2064 - 2071
Volltext (DOI) - Hölscher, T., Breuer, U., Adrian, L., Harms, H., Maskow, T. (2010):
Production of the chiral compound (R)-3-Hydroxybutyrate by a genetically engineered methylotrophic bacterium
Appl. Environ. Microb. 76 (16), 5585 - 5591
Volltext (DOI) - Imfeld, G., Aragonés, C.E., Fetzer, I., Mészáros, E., Zeiger, S., Nijenhuis, I., Nikolausz, M., Delerce, S., Richnow, H.H. (2010):
Characterization of microbial communities in the aqueous phase of a constructed model wetland treating 1,2-dichloroethene-contaminated groundwater
FEMS Microbiol. Ecol. 72 (1), 74 - 88
Volltext (DOI) - Jehmlich, N., Fetzer, I., Seifert, J., Mattow, J., Vogt, C., Harms, H., Thiede, B., Richnow, H.H., von Bergen, M., Schmidt, F. (2010):
Decimal place slope: a fast and precise method for quantifying 13C incorporation levels for detecting the metabolic activity of microbial species
Mol. Cell. Proteomics 9 (6), 1221 - 1227
Volltext (DOI) - Jehmlich, N., Hübschmann, T., Gesell Salazar, M., Völker, U., Benndorf, D., Müller, S., von Bergen, M., Schmidt, F. (2010):
Advanced tool for characterization of microbial cultures by combining cytomics and proteomics
Appl. Microbiol. Biotechnol. 88 (2), 575 - 584
Volltext (DOI) - Jehmlich, N., Kleinsteuber, S., Vogt, C., Benndorf, D., Harms, H., Schmidt, F., von Bergen, M., Seifert, J. (2010):
Phylogenetic and proteomic analysis of an anaerobic toluene-degrading community
J. Appl. Microbiol. 109 (6), 1937 - 1945
Volltext (DOI) - Jousset, A., Lara, E., Nikolausz, M., Harms, H., Chatzinotas, A. (2010):
Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil
Sci. Total Environ. 408 (5), 1221 - 1225
Volltext (DOI) - Koschorreck, M., Geller, W., Neu, T.R., Kleinsteuber, S., Kunze, T., Trosiener, A., Wendt-Potthoff, K. (2010):
Structure and function of the microbial community in an in situ reactor to treat an acidic mine pit lake
FEMS Microbiol. Ecol. 73 (2), 385 - 395
Volltext (DOI) - Kunapuli, U., Jahn, M.K., Lueders, T., Geyer, R., Heipieper, H.J., Meckenstock, R.U. (2010):
Desulfitobacterium aromaticivorans sp. nov. and Geobacter toluenoxydans sp. nov., iron-reducing bacteria capable of anaerobic degradation of monoaromatic hydrocarbons
Int. J. Syst. Evol. Microbiol. 60 (3), 686 - 695
Volltext (DOI) - Kuppardt, A., Vetterlein, D., Harms, H., Chatzinotas, A. (2010):
Visualisation of gradients in arsenic concentrations around individual roots of Zea mays L. using agar-immobilized bioreporter bacteria
Plant Soil 329 (1-2), 295 - 306
Volltext (DOI) - Kuppardt, S., Chatzinotas, A., Kästner, M. (2010):
Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater
Appl. Environ. Microb. 76 (24), 8222 - 8230
Volltext (DOI) - Lammirato, C., Miltner, A., Wick, L.Y., Kästner, M. (2010):
Hydrolysis of cellobiose by β-glucosidase in the presence of soil minerals - Interactions at solid-liquid interfaces and effects on enzyme activity levels
Soil Biol. Biochem. 42 (12), 2203 - 2210
Volltext (DOI) - Leibeling, S., Schmidt, F., Jehmlich, N., von Bergen, M., Müller, R.H., Harms, H. (2010):
Declining capacity of starving Delftia acidovorans MC1 to degrade phenoxypropionate herbicides correlates with oxidative modification of the initial enzyme
Environ. Sci. Technol. 44 (10), 3793 - 3799
Volltext (DOI) - Leibeling, S., Taubert, M., Seifert, J., von Bergen, M., Harms, H., Müller, R.H. (2010):
Adaptation of the herbicide-degrading strain Delftia acidovorans MC1 through carbonylation of RdpA as key enzyme
J. Biotechnol. 150 (Suppl. 1), S262 - S263
Volltext (DOI) - Mariana, F., Buchholz, F., Harms, H., Yong, Z., Yao, J., Maskow, T. (2010):
Isothermal titration calorimetry - A new method for the quantification of microbial degradation of trace pollutants
J. Microbiol. Methods 82 (1), 42 - 48
Volltext (DOI) - Maskow, T., Kemp, R., Buchholz, F., Schubert, T., Kiesel, B., Harms, H. (2010):
What heat is telling us about microbial conversions in nature and technology: from chip- to megacalorimetry
Microb. Biotechnol. 3 (3), 269 - 284
Volltext (DOI) - Maskow, T., Kiesel, B., Schubert, T., Yong, Z., Harms, H., Yao, J. (2010):
Calorimetric real time monitoring of lambda prophage induction
J. Virol. Methods 168 (1-2), 126 - 132
Volltext (DOI) - Müller, S., Harms, H., Bley, T. (2010):
Origin and analysis of microbial population heterogeneity in bioprocesses
Curr. Opin. Biotechnol. 21 (1), 100 - 113
Volltext (DOI) - Müller, S., Nebe von Caron, G. (2010):
Functional single-cell analyses: flow cytometry and cell sorting of microbial populations and communities
FEMS Microbiol. Rev. 34 (4), 544 - 587
Volltext (DOI) - Nizzetto, L., Macleod, M., Borgå, K., Cabrerizo, A., Dachs, J., Di Guardo, A., Ghirardello, D., Hansen, K.M., Jarvis, A., Lindroth, A., Ludwig, B., Monteith, D., Perlinger, J.A., Scheringer, M., Schwendenmann, L., Semple, K.T., Wick, L.Y., Zhang, G., Jones, K.C. (2010):
Past, present, and future controls on levels of persistent organic pollutants in the global environment. Understanding the legacy of persistent organic pollutants requires studying the transition from primary to secondary source control
Environ. Sci. Technol. 44 (17), 6526 - 6531
Volltext (DOI) - Otto, B., Schlosser, D., Reisser, W. (2010):
First description of a laccase-like enzyme in soil algae
Arch. Microbiol. 192 (9), 759 - 768
Volltext (DOI) - Perner, M., Petersen, J.M., Zielinski, F.U., Gennerich, H.H., Seifert, R. (2010):
Geochemical constraints on the diversity and activity of H2-oxidizing microorganisms in diffuse hydrothermal fluids from a basalt- and an ultramafic-hosted vent
FEMS Microbiol. Ecol. 74 (1), 55 - 71
Volltext (DOI) - Przybylski, D., Yaneva, N., Harms, H., Rohwerder, T., Müller, R.H. (2010):
Functional expression of 2-hydroxyisobutyryl-coa mutase in different E. coli derivatives
J. Biotechnol. 150 (Suppl. 1), S258
Volltext (DOI) - Rohwerder, T., Müller, R.H. (2010):
Biosynthesis of 2-hydroxyisobutyric acid (2-HIBA) from renewable carbon
Microb. Cell. Fact. 9 , art. 13
Volltext (DOI) - Rosell, M., Finsterbusch, S., Jechalke, S., Hübschmann, T., Vogt, C., Richnow, H.H. (2010):
Evaluation of the effects of low oxygen concentration on stable isotope fractionation during Aerobic MTBE biodegradation
Environ. Sci. Technol. 44 (1), 309 - 315
Volltext (DOI) - Schäfer, F., Harms, H., Rohwerder, T., Müller, R.H. (2010):
Microbial synthesis of chiral alcohols using a novel monooxygenase
J. Biotechnol. 150 (Suppl. 1), S356
Volltext (DOI) - Schleinitz, K.M., Vallaeys, T., Kleinsteuber, S. (2010):
Structural characterization of ISCR8, ISCR22, and ISCR23, subgroups of IS91-like insertion elements
Antimicrob. Agents Chemother. 54 (10), 4321 - 4328
Volltext (DOI) - Sträuber, H., Hübschmann, T., Jehmlich, N., Schmidt, F., von Bergen, M., Harms, H., Müller, S. (2010):
NBDT (3-(N-(7-nitrobenz-2-oxa-1,3-diazol-4-yl)amino)-3-toluene) - A novel fluorescent dye for studying mechanisms of toluene uptake into vital bacteria
Cytom. Part A 77A (2), 113 - 120
Volltext (DOI) - Sträuber, H., Müller, S. (2010):
Viability states of bacteria - specific mechanisms of selected probes
Cytom. Part A 77A (7), 623 - 634
Volltext (DOI) - Thullner, M. (2010):
Response to "Comment on 'Comparison of bioclogging effects in saturated porous media within one- and two-dimensional flow systems' by Martin Thullner" by Philippe Baveye
Ecol. Eng. 36 (6), 837 - 838
Volltext (DOI) - Thullner, M. (2010):
Comparison of bioclogging effects in saturated porous media within one- and two-dimensional flow systems
Ecol. Eng. 36 (2), 176 - 196
Volltext (DOI) - Villanueva, L., del Campo, J., Guerrero, R., Geyer, R. (2010):
Intact phospholipid and quinone biomarkers to assess microbial diversity and redox state in microbial mats
Microb. Ecol. 60 (1), 226 - 238
Volltext (DOI) - Wick, L.Y., Buchholz, F., Fetzer, I., Kleinsteuber, S., Härtig, C., Shi, L., Miltner, A., Harms, H., Pucci, G.N. (2010):
Responses of soil microbial communities to weak electric fields
Sci. Total Environ. 408 (20), 4886 - 4893
Volltext (DOI) - Witzig, M., Boguhn, J., Kleinsteuber, S., Fetzer, I., Rodehutscord, M. (2010):
Influence of the maize silage to grass silage ratio and feed particle size of rations for ruminants on the community structure of ruminal Firmicutes in vitro
J. Appl. Microbiol. 109 (6), 1998 - 2010
Volltext (DOI) - Witzig, M., Boguhn, J., Kleinsteuber, S., Fetzer, I., Rodehutscord, M. (2010):
Effect of the corn silage to grass silage ratio and feed particle size of diets for ruminants on the ruminal Bacteroides-Prevotella community in vitro
Anaerobe 16 (4), 412 - 419
Volltext (DOI) - Zhang, C., Kang, Q., Wang, X., Zilles, J.L., Müller, R.H., Werth, C.J. (2010):
Effects of pore-scale heterogeneity and transverse mixing on bacterial growth in porous media
Environ. Sci. Technol. 44 (8), 3085 - 3092
Volltext (DOI) - Zhou, Y., Yao, J., He, M., Choi, M.M.F., Feng, L., Chen, H., Wang, F., Chen, K., Zhuang, R., Maskow, T., Wang, G., Zaray, G. (2010):
Reduction in toxicity of arsenic(III) to Halobacillus sp. Y35 by kaolin and their related adsorption studies
J. Hazard. Mater. 176 (1-3), 487 - 494
Volltext (DOI)
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2010 (6)
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2023 (1)
- Lai, B. (2023):
Biophotovoltaik: mikrobielle Wasserstoffproduktion
Biospektrum 29 (1), 97 - 98
Volltext (DOI)
2022 (4)
- Cárdenas-Rey, I., d. J. Bello Gonzalez, T., van der Goot, J., Ceccarelli, D., Bouwhuis, G., Schillemans, D., Jurburg, S.D., Veldman, K.T., de Visser, J.A.G.M., Brouwer, M.S.M. (2022):
Succession in the caecal microbiota of developing broilers colonised by extended-spectrum β-lactamase-producing Escherichia coli
Animal Microbiome 4 , art. 51
Volltext (DOI) - Izabel-Shen, D., Li, S., Luo, T., Wang, J., Li, Y., Sun, Q., Yu, C.-P., Hu, A. (2022):
ISME Commun. 2 , art. 48
Volltext (DOI) - Khurana, S., Heße, F., Hildebrandt, A., Thullner, M. (2022):
Should we worry about surficial dynamics when assessing nutrient cycling in the groundwater?
Front. Water 4 , art. 780297
Volltext (DOI) - Li, S., Müller, S. (2022):
Stabile Langzeitkultivierung mikrobieller Gemeinschaften im loop-design
Biospektrum 28 (7), 705 - 708
Volltext (DOI)
2021 (4)
- Dai, S., Korth, B., Vogt, C., Harnisch, F. (2021):
Microbial electrochemical oxidation of anaerobic digestion effluent from treating HTC process water
Front. Chem. Eng. 3 , art. 652445
Volltext (DOI) - Schramm, E., Douhaire, C., Hübner, T. (2021):
Komposttoiletten als Ausgangspunkt für sichere Düngeprodukte. Composting toilets as starting point for safe fertilizer products
Wasser und Abfall 23 (10), 52 - 56
Volltext (DOI) - Wick, L.Y. (2021):
Buchrezension zu: Umweltmikrobiologie (Walter Reineke und Michael Schlömann), 647 S., 335 Abb., Springer, 2020, 3. Aufl., SC, 44,99 €, ISBN: 9783662596548
Biospektrum 27 (2), 218
Volltext (DOI) - Xiong, B.-J., Dusny, C., Wang, L., Appel, J., Lindstaedt, K., Schlosser, D., Harms, H., Wick, L. (2021):
Illuminate the hidden: in vivo mapping of microscale pH in the mycosphere using a novel whole-cell biosensor
ISME Commun. 1 , art. 75
Volltext (DOI)
2020 (4)
- Guo, Y., Rosa, L.F.M., Müller, S., Harnisch, F. (2020):
Monitoring stratification of anode biofilms in bioelectrochemical laminar flow reactors using flow cytometry
Environ. Sci. Ecotechnol. 4 , art. 10062
Volltext (DOI) - Heintz-Buschart, A., Guerra, C., Djukic, I., Cesarz, S., Chatzinotas, A., Patoine, G., Sikorski, J., Buscot, F., Küsel, K., Wegner, C.-E., Eisenhauer, N. (2020):
Microbial diversity-ecosystem function relationships across environmental gradients
Research Ideas and Outcomes 6 , e52217
Volltext (DOI) - Joss, H., Muehe, E.M., Kappler, A. (2020):
Arsen in Grundwasser und Reis — Ursachen und Konsequenzen
Biospektrum 26 (6), 676 - 678
Volltext (DOI) - Nikolausz, M., Kretzschmar, J. (2020):
Anaerobic digestion in the 21st century. Editorial
Bioengineering-Basel 7 , art. 157
Volltext (DOI)
2019 (4)
- Harnisch, F. (2019):
Trendbericht Biochemie Teil 5: Biochemie unter Strom
Nachr. Chem. 67 (7-8), 64 - 66
Volltext (DOI) - Harnisch, F., Kuchenbuch, A. (2019):
Mr. Elektron erobert die Biosynthese
Biospektrum 25 (2), 232 - 233
Volltext (DOI) - Rodrigo Quejigo, J., Tejedor‑Sanz, S., Esteve‑Núñez, A., Harnisch, F. (2019):
Bed electrodes in microbial electrochemistry: setup, operation and characterization
ChemTexts 5 (1), art. 4
Volltext (DOI) - Said, N., Chatzinotas, A., Schmidt, M. (2019):
Have an ion on it: the life-cycle of Bdellovibrio bacteriovorus viewed by helium-ion microscopy
Adv. Biosyst. 3 (1), art. 1800250
Volltext (DOI)
2018 (6)
- Harnisch, F., Blombach, B., Buyel, J., Centler, F., Classen, T., Ebert, B.E., Eyer, C., Dohnt, K., Grünberger, A., Jandt, U., Jung, S., Kara, S., Regestein, L., Schmid, J., Tischler, D., Wierckx, N. (2018):
Revisionsbedürftig? Rechte und Pflichten akademischer Nachwuchsführungskräfte
Forschung & Lehre 25 (9), 788 - 789 - Harnisch, F., Urban, C. (2018):
Elektrobioraffinerien: Synergien zwischen elektrochemischen und mikrobiologischen Stoffumwandlungen nutzbar machen
Angew. Chem. 130 (32), 10168 - 10175
Volltext (DOI) - Schlosser, D. (2018):
Sind konventionelle Kunststoffe mikrobiell abbaubar?
Biospektrum 24 (4), 375 - 378
Volltext (DOI) - Strehlitz, B., Hunger, S., Kuchenbuch, A., Rosa, L.F.M., Harnisch, F. (2018):
Bakterien mit Strom füttern - Reaktoren für die Elektrobiotechnologie
ChemieXtra 8 (11), 19 - 21 - Strehlitz, B., Hunger, S., Kuchenbuch, A., Rosa, L.F.M., Harnisch, F. (2018):
Bakterien mit Strom füttern - Reaktoren für die Elektrobiotechnologie fit machen
GIT Labor-Fachzeitschrift 62 (3), 32 - 34
Volltext (URL) - Worrich, A. (2018):
Eine starke Allianz
Umwelt Perspektiven (Dezember 2018), 20 - 21
2017 (3)
- Kallies, R., Kiesel, B., Zopfi, J., Wick, L.Y., Chatzinotas, A. (2017):
Complete genome sequence of Alteromonas virus vB_AspP-H4/4
Genome Announc. 5 (43), e00914-17
Volltext (DOI) - Korth, B., Maskow, T., Harnisch, F. (2017):
Bioelektrokalorimetrie — der mikrobielle elektrochemische Peltier-Effekt
Biospektrum 23 (2), 220 - 222
Volltext (DOI) - Schmid, J., Harnisch, F. (2017):
Das neue Wissenschaftszeitvertragsgesetz: Intention und Status quo!?
Biospektrum 23 (2), 119
Volltext (DOI)
2016 (2)
- Harnisch, F., Rosenbaum, M.A., Greiner, A., Schröder, U. (2016):
Wie Mikroorganismen und Elektroden interagieren
Nachr. Chem. 64 (7-8), 732 - 737
Volltext (DOI) - Kleinert, F., Kallies, R., Zweynert, A., Bierbaum, G. (2016):
Draft genome sequences of three northern German epidemic Staphylococcus aureus (ST247) strains containing multiple copies of IS256
Genome Announc. 4 (5), e00936-16
Volltext (DOI)
2015 (3)
- Gimkiewicz, C., Hunger, S., Stang, C., Rosa, L.F.M., Zehnsdorf, A., Harnisch, F. (2015):
Bioreactors go electro – Bioreaktoren für Bioelektrotechnologie aufrüsten
Biospektrum 21 (4), 453 - 454
Volltext (DOI) - Herke, Z., Maskow, T., Németh, Z.I. (2015):
A new method for detecting cross-inhibition effects in the environmental biocatalytic processes
BioTechnologia 96 (4), 279 - 284
Volltext (DOI) - Sträuber, H., Bühligen, F., Kleinsteuber, S., Nikolausz, M., Porsch, K. (2015):
Improved anaerobic fermentation of wheat straw by alkaline pre-treatment and addition of alkali-tolerant microorganisms
Bioengineering-Basel 2 (2), 66 - 93
Volltext (DOI)
2014 (2)
- Harnisch, F., Holtmann, D., Agler-Rosenbaum, M., Schröder, U. (2014):
Die Elektrobiotechnologie in Deutschland nimmt Fahrt auf
Biospektrum 20 (1), 93 - 94 - Kleinsteuber, S. (2014):
Editorial: Special Issue on "Microbial ecology of anaerobic digestion"
Bioengineering-Basel 1 (2), 111 - 112
Volltext (DOI)
2013 (6)
- Jahn, M., Seifert, J., Hübschmann, T., von Bergen, M., Harms, H., Müller, S. (2013):
Comparison of preservation methods for bacterial cells in cytomics and proteomics
Journal of Integrated OMICS 3 (1), 25 - 33
Volltext (DOI) - Koch, C., Brumme, B., Müller, S. (2013):
Mikrobielle Gemeinschaften im Visier der Durchflusszytometrie : Aktivitätsanalyse per Barcode
Biospektrum 19 (4), 396 - 400
Volltext (DOI) - Narodoslawsky, M., Fiedler, D. (2013):
Energy, Sustainability and Society is celebrating two years of successful open-access publication. Editorial
Energy Sustain. Soc. 3 , art. 21
Volltext (DOI) - Rosenbaum, M.A., Schröder, U., Harnisch, F. (2013):
Von der Abwasserreinigung zur Bioelektrotechnologie: Mikroben unter Strom
Biologie in unserer Zeit 43 (2), 96 - 103
Volltext (DOI) - Ulbrich, K., Kornig, S., Lodemann, T., Eschenhagen, W., Bindel, L., Settele, J. (2013):
Klima und biologische Vielfalt - erforscht mit der Lernsoftware PRONAS
MNU, Math. Naturwiss. Unterr. 66 (3), 165 - 172 - Wick, L.Y., Harms, H. (2013):
Unterirdische Autobahnen: Pilze beim Schadstoffabbau
Biospektrum 19 (7), 720 - 722
Volltext (DOI)
2012 (6)
- Hahn-Tomer, S. (2012):
Trinkwassertest mit Leuchtkraft
Die Welt (22.3.2012, Beil.) - Przybylski, D., Rohwerder, T., Harms, H., Müller, R.H. (2012):
Third-generation feed stocks for the clean and sustainable biotechnological production of bulk chemicals: synthesis of 2-hydroxyisobutyric acid
Energy Sustain. Soc. 2 , art. 11
Volltext (DOI) - Pucci, G.N., Acuña, A.J., Wick, L., Pucci, O.H. (2012):
The use of electrobioremediation in hydrocarbon release and bioremediation
IJCR 4 (12), 451 - 454
Volltext (URL) - Pucci, G.N., Acuña, A.J., Wick, L.Y., Pucci, O.H. (2012):
Electrobioremediation of Patagonian soils contaminated with hydrocarbons
Portugaliae Electrochimica Acta 30 (5), 361 - 370
Volltext (DOI) - Sträuber, H., Schröder, M., Kleinsteuber, S. (2012):
Metabolic and microbial community dynamics during the hydrolytic and acidogenic fermentation in a leach-bed process
Energy Sustain. Soc. 2 , art. 13
Volltext (DOI) - Ziganshin, A.M., Ziganshina, E.E., Kleinsteuber, S., Pröter, J., Ilinskaya, O.N. (2012):
Methanogenic community dynamics during anaerobic utilization of agricultural wastes
Acta Naturae 4 (4), 91 - 97
2011 (4)
- Goodman, V., Müller, A., Gröger-Arndt, H., Schlosser, D., Jehmlich, N., Treudler, R., Lehmann, I., Simon, J.-C., von Bergen, M. (2011):
Identification of spore specific allergen candidates from Penicillium chrysogenum
Journal of Integrated OMICS 1 (2), 272 - 279
Volltext (DOI) - Kuppardt, A., Harms, H. (2011):
Bakterien zum Nachweis von Arsen in Trinkwasser
Biospektrum 17 (3), 284 - 286
Volltext (DOI) - Narodoslawsky, M., Fiedler, D. (2011):
Editorial
Energy Sustain. Soc. 1 , art. 1
Volltext (DOI) - Schlosser, D. (2011):
Pilze im Süßwasser und organische Umweltschadstoffe
Biospektrum 17 (7), 745 - 748
Volltext (DOI)
2010 (6)
- Acuña, A.J., Pucci, G.N., Tonín, N., Wick, L., Pucci, O.H. (2010):
Electrobiorremediación. Una tecnología en dessarrollo para la recuperación de suelos contaminados con hidrocarburos
Ingeniería sanitaria y ambiental (105), 80 - 85 - Acuña, A.J., Tonín, N., Pucci, G.N., Wick, L., Pucci, O.H. (2010):
Electrobioremediation of an unsaturated soil contaminated with hydrocarbon after landfarming treatment
Portugaliae Electrochimica Acta 28 (4), 253 - 263
Volltext (DOI) - Altenburger, R., Berns, A.E., Bittens, M., Brack, W., Burauel, P., Centler, F., Daus, B., Goss, K.-U., Harms, H., Kopinke, F.-D., Kühnel, D., Liess, M., Mackenzie, K., Miltner, A., Thullner, M., Wennrich, R., Wick, L.Y. (2010):
Chemicals in the environment (CITE). Report of the First Annual Conference of the Helmholtz research topic CITE
UWSF - Z. Umweltchem. Ökotox. 22 (4), 502 - 506
Volltext (DOI) - Fetzer, I., Jehmlich, N., Vogt, C., Richnow, H.H., Seifert, J., Harms, H., von Bergen, M., Schmidt, F. (2010):
Calculation of partial isotope incorporation into peptides measured by mass spectrometry
BMC Res. Notes 3 , art. 178
Volltext (DOI) - Wendeberg, A. (2010):
Fluorescence in situ hybridization for the identification of environmental microbes
Cold Spring Harbor Protocols 2010 (1), prot5366
Volltext (DOI) - Zielinski, F.U., Dubilier, N. (2010):
Der Eukaryoten-Zellkern als ökologische Nische für Bakterien
Biospektrum 16 (1), 12 - 15
Inhalt:
2022 (3)2021 (7)
2020 (9)
2019 (12)
2018 (15)
2017 (8)
2016 (9)
2015 (6)
2014 (11)
2013 (4)
2012 (10)
2011 (7)
2010 (13)
Weiterführende Recherchen können Sie in unserem Publikationsverzeichnis durchführen.
2022 (3)
- Tischler, D., Wei, R., Harnisch, F. (2022):
Kapitel 3 Umweltbiotechnologie
Biotechnologie 2040 - Blick in die Zukunft einer Schlüsseltechnologie
DECHEMA, Frankfurt/Main, S. 53 - 65
Volltext (URL) - Harnisch, F., Dohnt, K. (2022):
Kapitel 5 Elektrobiotechnologie
Biotechnologie 2040 - Blick in die Zukunft einer Schlüsseltechnologie
DECHEMA, Frankfurt/Main, S. 75 - 81
Volltext (URL) - Assael, M.J., Maitland, G.C., Maskow, T., von Stockar, U., Wakeham, W.A., Will, S. (2022):
Commonly asked questions in thermodynamics, second edition
CRC Press / Taylor & Francis, Boca Raton, FL, 498 pp.
Volltext (DOI)
2021 (7)
- Schlosser, D. (2021):
Cultivation of filamentous fungi for attack on synthetic polymers via biological Fenton chemistry
In: Weber, G., Bornscheuer, U.T., Wei, R. (eds.)
Enzymatic plastic degradation
Methods Enzymol. 648
Elsevier, p. 71 - 94
Volltext (DOI) - Schlosser, D. (2021):
Past, presence and future of macrofungi applications: old friends, yet unknown strangers
In: Sridhar, K.R., Deshmukh, S.K. (eds.)
Advances in macrofungi: Industrial avenues and prospects
Progress in Mycological Research
CRC Press / Taylor & Francis, Boca Raton, FL, p. 1 - 8 - Sauer, J., Kolb, T., Pfeifer, P., Müller-Langer, F., Klemm, M., Jürgens, S., Peters, R., Hadrich, J., Schaadt, A., Harnisch, F., Zuberbühler, U. (2021):
Synthetische Kraftstoffe – Technologien, Prozessketten, Kohlenstoffquellen und Produkte
In: Szczepanski, P., Wunschick, F. (Hrsg.)
Forschung für den European Green Deal. Beiträge zur FVEE-Jahrestagung 2020 des ForschungsVerbunds Erneuerbare Energien 02. bis 04. November 2020, Online-Veranstaltung
FVEE-Themen 2020
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 43 - 47
Volltext (URL) - Rago, L., Harnisch, F. (2021):
Electroautotrophs: feeding microbes with current for CO2 fixation
In: Kourist, R., Schmidt, S. (eds.)
The autotrophic biorefinery: raw materials from biotechnology
De Gruyter, Berlin ; Boston, p. 277 - 295
Volltext (DOI) - Harnisch, F. (2021):
Chemikalien aus nichts als CO2 und elektrischer Energie? Mit Elektrobiotechnologie!
In: Bach, M., Bronsema, V., Englbrecht, C., Horstmann, C.F., Kahnert, M., Pietzsch, J. (Hrsg.)
BIO Deutschland Jahrbuch 2021/2022
Biotechnologie-Industrie-Organisation Deutschland e. V. (BIO Deutschland), Berlin, S. 54 - 55
Volltext (URL) - Ebert, B., Birzle-Harder, B., Douhaire, C., Hübner, T., Schramm, E., Winker, M. (2021):
Kompostprodukte aus hygienisierten Fäkalien und Pflanzenkohle: Bedürfnisse der Nutzenden, Kooperationsmodelle und rechtliche Rahmenbedingungen
ISOE-Materialien Soziale Ökologie 65
Institut für Sozial-Ökologische Forschung, Frankfurt am Main, 48 S.
Volltext (URL) - de Almeida, B.L.S., Queiroz, A.P., Avila Santos, A.P., Bonidia, R.P., Nunes da Rocha, U., Sipoli Sanches, D., de Carvalho, A.C.P.L.F. (2021):
Feature importance analysis of non-coding DNA/RNA sequences based on machine learning approaches
Advances in bioinformatics and computational biology. 14th Brazilian Symposium on Bioinformatics, BSB 2021, Virtual Event, November 22–26, 2021, Proceedings
Lect. Notes Comput. Sci. 13063
Springer, Berlin, Heidelberg, New York, p. 81 - 92
Volltext (DOI)
2020 (9)
- Wick, L.Y. (2020):
Bioavailability as a microbial system property: lessons learned from biodegradation in the mycosphere
In: Ortega-Calvo, J.-J., Parsons, J.R. (eds.)
Bioavailability of organic chemicals in soil and sediment
Handbook of Environmental Chemistry Series 100
Springer, Berlin, Heidelberg, p. 267 - 289
Volltext (DOI) - Schlosser, D. (2020):
Fungal attack on environmental pollutants representing poor microbial growth substrates
In: Nevalainen, H. (ed.)
Grand challenges in fungal biotechnology
Grand Challenges in Biology and Biotechnology
Springer International Publishing, Cham, p. 33 - 57
Volltext (DOI) - Schlosser, D. (2020):
Biotechnologies for water treatment
In: Filip, J., Cajthaml, T., Najmanová, P., Černík, M., Zbořil, R. (eds.)
Advanced nano-bio technologies for water and soil treatment
Springer, Cham, p. 335 - 343
Volltext (DOI) - Schlosser, D. (ed., 2020):
Laccases in bioremediation and waste valorisation
Microbiology Monographs 33
Springer, Berlin, Heidelberg, New York, 238 pp.
Volltext (DOI) - Popp, D., Bonk, F., Becker, D., Kleinsteuber, S. (2020):
Nucleic acid based molecular biology tests
In: Liebetrau, J., Pfeiffer, D. (eds.)
Collection of methods for biogas. Methods to determine parameters for analysis purposes and parameters that describe processes in the biogas sector
Biomass energy use 7
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 232 - 244
Volltext (URL) - Haghbeen, K., Schlosser, D. (2020):
Laccases in the context of potentially cooperating enzymes
In: Schlosser, D. (ed.)
Laccases in bioremediation and waste valorisation
Microbiology Monographs 33
Springer, Berlin, Heidelberg, New York, p. 79 - 114
Volltext (DOI) - Fischer, A., Kuntze, K., Müller, L., Richnow, H.-H., Nikolausz, M. (2020):
Differentiation of methanogenic pathways in biogas plants using compound-specific stable isotope analysis
In: Liebetrau, J., Pfeiffer, D. (eds.)
Collection of methods for biogas. Methods to determine parameters for analysis purposes and parameters that describe processes in the biogas sector
Biomass energy use 7
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 268 - 278
Volltext (URL) - Dzofou Ngoumelah, D., Harnisch, F., Kretzschmar, J. (2020):
Interaction between electroactive biofilms and anaerobic digestion effluents
3rd Doctoral Colloquium Bioenergy 17/18 September, 2020
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 64 - 65
Volltext (URL) - Borim Corrêa, F., Eziuzor, S., Peng, S., Schultz, J., Saraiva, J.P., Adrian, L., Stadler, P., Kleinsteuber, S., Vogt, C., Nunes da Rocha, U. (2020):
Genome-resolved metagenomics sheds light on the anaerobic conversion of aromatics by complex communities
3rd Doctoral Colloquium Bioenergy 17/18 September, 2020
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, p. 62 - 63
Volltext (URL)
2019 (12)
- Wick, L.Y., Chatzinotas, A. (2019):
Capacity of ecosystems to degrade anthropogenic chemicals
In: Schröter, M., Bonn, A., Klotz, S., Seppelt, R., Baessler, C. (eds.)
Atlas of ecosystem services : drivers, risks, and societal responses
Springer International Publishing, Cham, p. 179 - 182
Volltext (DOI) - Thullner, M., Regnier, P. (2019):
Microbial controls on the biogeochemical dynamics in the subsurface
In: Druhan, J., Tournassat, C. (eds.)
Reactive transport in natural and engineered systems
Rev. Mineral. Geochem. 85
Mineralogical Society of America (MSA) ; Geochemical Society , Chantilly, VA , p. 265 - 302
Volltext (DOI) - Liebetrau, J., Sträuber, H., Kretzschmar, J., Denysenko, V., Nelles, M. (2019):
Anaerobic digestion
In: Wagemann, K., Tippkötter, N. (eds.)
Biorefineries
Adv. Biochem. Eng. Biotechnol. 166
Springer Nature, p. 281 - 299
Volltext (DOI) - Krieg, T., Madjarov, J., Rosa, L.F.M., Enzmann, F., Harnisch, F., Holtmann, D., Rabaey, K. (2019):
Reactors for microbial electrobiotechnology
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 231 - 271
Volltext (DOI) - Korth, B., Harnisch, F. (2019):
Modeling microbial electrosynthesis
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 273 - 325
Volltext (DOI) - Holtmann, D., Harnisch, F. (2019):
Electrification of biotechnology: Quo vadis?
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 395 - 411
Volltext (DOI) - Holtmann, D., Harnisch, F. (2019):
Die Bioelektrosynthese als essentieller Baustein der Bioökonomie. DECHEMA Positionspapier
DECHEMA, Frankfurt/Main, 19 S.
Volltext (URL) - Harnisch, F., Holtmann, D. (2019):
Bioelectrosynthesis: Preface
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. V - VI - Harnisch, F., Holtmann, D. (2019):
Electrification of biotechnology: Status quo
In: Harnisch, F., Holtmann, D. (eds.)
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, p. 1 - 14
Volltext (DOI) - Harnisch, F., Holtmann, D. (eds., 2019):
Bioelectrosynthesis
Adv. Biochem. Eng. Biotechnol. 167
Springer Nature, IX, 420 pp.
Volltext (DOI) - Harnisch, F., Bahnemann, J., Buyel, J., Centler, F., Classen, T., Dohnt, K., Ebert, B.E., Eyer, K., Grünberger, A., Jandt, U., Jung, S., Kara, S., Krujatz, F., Link, H., Regestein, L., Schmid, J., Tischler, D. (2019):
Rechte und Pflichten von akademischen Nachwuchsführungskräften. Stellungnahme des Zukunftsforums Biotechnologie der DECHEMA e.V.
DECHEMA, Frankfurt/Main, 15 S.
Volltext (URL) - Druhan, J.L., Winnick, M.J., Thullner, M. (2019):
Stable isotope fractionation by transport and transformation
In: Druhan, J., Tournassat, C. (eds.)
Reactive transport in natural and engineered systems
Rev. Mineral. Geochem. 85
Mineralogical Society of America (MSA) ; Geochemical Society , Chantilly, VA , p. 239 - 264
Volltext (DOI)
2018 (15)
- Worrich, A., Wick, L.Y., Banitz, T. (2018):
Ecology of contaminant biotransformation in the mycosphere: Role of transport processes
In: Gadd, G.M., Sariaslani, S. (eds.)
Advances in Applied Microbiology 104
Elsevier, Oxford, p. 93 - 133
Volltext (DOI) - Worrich, A. (2018):
Eine starke Allianz
KlarText : Preis für Wissenschaftskommunikation : die Beiträge der Preisträger
Klaus Tschira Stiftung gGmbH, Heidelberg, S. 22 - 25
Volltext (URL) - Wick, L.Y., Harms, H., Smith, K.E.C. (2018):
Microorganism-hydrophobic compound interactions
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 17 - 31
Volltext (DOI) - Wick, L.Y., Harms, H. (2018):
The mycosphere as a hotspot for the biotransformation of contaminants in soil
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 315 - 324
Volltext (DOI) - Thullner, M., Stefanakis, A.I., Dehestani, S. (2018):
Constructed wetlands treating water contaminated with organic hydrocarbons
In: Stefanakis, A.I. (ed.)
Constructed wetlands for industrial wastewater treatment
Wiley, Hoboken, NJ, p. 43 - 63
Volltext (DOI) - Sträuber, H. (2018):
Mittelkettige Fettsäuren als Teilstrom des Biogasprozesses
DBFZ-Jahrestagung 2018: Energie & Stoffe aus Biomasse: Konkurrenten oder Partner? 19./20. September 2018
DBFZ Deutsches Biomasseforschungszentrum gemeinnützige GmbH, Leipzig, S. 156
Volltext (URL) - Stinner, P.W., Deuker, A., Schmalfuß, T., Brock, C., Rensberg, N., Denysenko, V., Trainer, P., Möller, K., Zang, J., Janke, L., Leandro, W.M., Oehmichen, K., Popp, D., Daniel-Gromke, J. (2018):
Perennial and intercrop legumes as energy crops for biogas production
In: Meena, R.S., Das, A., Yadav, G.S., Lal, R. (eds.)
Legumes for soil health and sustainable management
Springer Singapore, Singapore, p. 139 - 171
Volltext (DOI) - Schwarz, S., Zuberbühler, U., Schmidt, M., Kretzschmar, J., Friedrich, A., Schröer, B., Hebling, C., Calnan, S., Peters, R., Dittmeyer, R., Harnisch, F., Nagel, T. (2018):
Power-to-X: Technologien für Übermorgen?!
In: Baur, F., Fischedick, M. (Hrsg.)
Forschung für die Energiewende : die Gestaltung des Energiesystems ; Jahrestagung 2017 des ForschungsVerbunds Erneuerbare Energien, 8. und 9. November 2017, Umweltforum Berlin ; [Innovationen für die Energiewende, Beiträge zur FVEE-Jahrestagung 2017]
FVEE-Themen 2017
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 49 - 52
Volltext (URL) - Robles, C., Nair, R.B., Kleinsteuber, S., Nikolausz, M., Sárvári Horváth, I. (2018):
Biogas production: microbiological aspects
In: Tabatabaei, M., Ghanavati, H. (eds.)
Biogas, biofuel and biorefinery technologies
Biofuel and Biorefinery Technologies Vol. 6
Springer, p. 163 - 198
Volltext (DOI) - Liebetrau, J., Weinrich, S., Sträuber, H., Kretzschmar, J. (2018):
Anaerobic fermentation of organic material: biological processes and their control parameters
In: Meyers, R.A. (ed.)
Encyclopedia of sustainability science and technology
Springer, New York, p. 1 - 30
Volltext (DOI) - Kleinsteuber, S. (2018):
Metagenomics of methanogenic communities in anaerobic digesters
In: Stams, A.J.M., Sousa, D.Z. (eds.)
Biogenesis of hydrocarbons
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham,
Volltext (DOI) - Heipieper, H.J., Martínez, P.M. (2018):
Toxicity of hydrocarbons to microorganisms
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 335 - 344
Volltext (DOI) - Harms, H., Wick, L.Y., Smith, K.E.C. (2018):
Matrix - hydrophobic compound interactions
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 33 - 45
Volltext (DOI) - Harms, H., Smith, K.E.C., Wick, L.Y. (2018):
Problems of hydrophobicity/bioavailability: an introduction
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 3 - 15
Volltext (DOI) - Bonk, F. (2018):
Microbial resources management in anaerobic digestion
Dissertation, Universität Leipzig, Fakultät für Lebenswissenschaften
130 pp.
2017 (8)
- Wick, L.Y., Otto, S., Holliger, C. (2017):
Two-phase cultivation techniques for hydrocarbon-degrading microorganisms
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Isolation and cultivation
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 107 - 117
Volltext (DOI) - Thrän, D., Kleinsteuber, S., Liebetrau, J., Simon, S., Krautkremer, B., Baur, F., Guss, H. (2017):
Smart bioenergy concept - Aufgaben der Bioenergie im Energiesystem der Zukunft
In: Szczepanski, P., Wunschick, F., Martin, N. (Hrsg.)
Forschung für die Energiewende : die Gestaltung des Energiesystems. Beiträge zur Jahrestagung 2016 des ForschungsVerbunds Erneuerbare Energien, 2. und 3. November 2016, Umweltforum Berlin. FVEE-Themen
FVEE-Themen
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 76 - 80
Volltext (URL) - Schlosser, D., Wick, L.Y. (2017):
Cultivation of hydrocarbon-degrading fungi
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Isolation and cultivation
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 269 - 281
Volltext (DOI) - Müller-Langer, F., Dietrich, R.-U., van de Krol, R., Arnold, K., Harnisch, F. (2017):
Erneuerbare Kraftstoffe für Mobilität und Industrie
In: Szczepanski, P., Wunschick, F., Martin, N. (Hrsg.)
Forschung für die Energiewende : die Gestaltung des Energiesystems. Beiträge zur Jahrestagung 2016 des ForschungsVerbunds Erneuerbare Energien, 2. und 3. November 2016, Umweltforum Berlin. FVEE-Themen
FVEE-Themen
ForschungsVerbund Erneuerbare Energien (FVEE), Berlin, S. 110 - 116
Volltext (URL) - Harnisch, F., Koch, C. (2017):
Mit Strom von Zucker zum Abfall und zurück. Biobrennstoffzellen bis Bioelektrosynthese
In: Koesling, V., Spierling, R. (Hrsg.)
Alles Zucker! Nahrung - Werkstoff - Energie
bebra Verlag, Berlin, S. 215 - 225 - Harms, H., Wick, L.Y., Schlosser, D. (2017):
The fungal community in organically polluted systems
In: Dighton, J., White, J.F. (eds.)
The fungal community: Its organization and role in the ecosystem
Mycology Series 32
CRC Press / Taylor & Francis, Boca Raton, FL, p. 459 - 469 - Harms, H., Wick, L.Y. (2017):
Determining the tendency of microorganisms to interact with hydrocarbon phases
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Activities and phenotypes
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 43 - 53
Volltext (DOI) - Braune, M., Daniel-Gromke, J., Sträuber, H. (2017):
Von der Biogasanlage zur modernen Bioraffinerie
11. Rostocker Bioenergieforum "Beitrag der Bioenergie zur Senkung der Treibhausgasemission" am 22. und 23. Juni 2017 an der Universität Rostock : Tagungsband
Schriftenreihe Umweltingenieurwesen 68
Universität Rostock, Agrar- und Umweltwissenschaftliche Fakultät, Rostock, S. 105 - 113
2016 (9)
- Stefanakis, A.I., Thullner, M. (2016):
Fate of phenolic compounds in constructed wetlands treating contaminated water
In: Ansari, A.A., Gill, S.S., Gill, R., Lanza, G.R., Newman, L. (eds.)
Phytoremediation : management of environmental contaminants. Vol. 4
Springer International Publishing, Cham, p. 311 - 325
Volltext (DOI) - Siegfried, K., Hahn-Tomer, S., Heuser, S. (2016):
Waterbox & AQUA-CHECK—a newly developed package for drinking water supply and monitoring
In: Bhattacharya, P., Vahter, M., Jarsjö, J., Kumpiene, J., Ahmad, A., Sparrenbom, C., Jacks, G., Donselaar, M.E., Bundschuh, J., Naidu, R. (eds.)
Arsenic Research and Global Sustainability : Proceedings of the Sixth International Congress on Arsenic in the Environment (As2016), June 19-23, 2016, Stockholm, Sweden
CRC Press / Taylor & Francis, Boca Raton, FL, p. 245 - 246
Volltext (DOI) - Schattenhofer, M., Hubalek, V., Wendeberg, A. (2016):
Identification of microorganisms in hydrocarbon-contaminated aquifer samples by fluorescence in situ hybridization (CARD-FISH)
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Ultrastructure and imaging
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 103 - 113
Volltext (DOI) - Pröter, J., Lorenz, H., Sträuber, H. (2016):
Herausforderungen in der mikrobiellen biochemischen Konversion – welche Innovationen brauchen wir? Challenges for the microbial biochemical conversion – what kind of innovations do we need?
Mikroorganismen und Wirbellose – entscheidende Dienstleister für Landwirtschaft und Ernährung. Tagungsband eines Symposiums am 26./27. November 2015 in Berlin
Agrobiodiversität : Schriftenreihe des Informations- und Koordinationszentrums für Biologische Vielfalt 39
Bundesanstalt für Landwirtschaft und Ernährung , Bonn, S. 104 - 119
Volltext (URL) - Popp, D. (2016):
Alternative substrates for biogas production: impact of plant secondary metabolites on the anaerobic digestion process
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
149 pp. - Otto, B. (2016):
Laccases from green algae: occurrence, characteristics, and possible functions and uses
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
79 pp. - Krueger, M.C. (2016):
Exploring capabilities and constraints of fungi for the oxidative decomposition of polystyrene and selected analogues
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
151 pp. - Koch, C., Aulenta, F., Schröder, U., Harnisch, F. (2016):
Microbial electrochemical technologies: industrial and environmental biotechnologies based on interactions of microorganisms with electrodes
Comprehensive biotechnology
Reference Module in Earth Systems and Environmental Sciences 6
Elsevier, Amsterdam, p. 545 - 563
Volltext (DOI) - Dieckmann, C., Edelmann, W., Kaltschmitt, M., Liebetrau, J., Oldenburg, S., Ritzkowski, M., Scholwin, F., Sträuber, H., Weinrich, S. (2016):
Biogaserzeugung und –nutzung
In: Kaltschmitt, M., Hartmann, H., Hofbauer, H. (Hrsg.)
Energie aus Biomasse : Grundlagen, Techniken und Verfahren. 3., aktualisierte Aufl.
Springer, Berlin, Heidelberg, S. 1609 - 1635
Volltext (DOI)
2015 (6)
- Zanaroli, G., Beck, H., Beimfohr, C., Cichocka, D., Corvini, P., Frascari, D., Hofmann, U., Kästner, M., Macek, T., Müller, J.A., Uhlik, O., Schlosser, D. (2015):
Analytical and monitoring methods
In: Hochstrat, R., Wintgens, T., Corvini, P. (eds.)
Immobilized biocatalysts for bioremediation of groundwater and wastewater
IWA Publishing, London, p. 15 - 48 - Siegfried, K., Koelsch, A., Osterwalder, E., Hahn-Tomer, S. (2015):
Advantages of biosensor water quality monitoring
In: Chalov, S.R., Karthe, D., Kasimov, N.S., Kappas, M. (eds.)
Water and environment in the Selenga-Baikal Basin : international research cooperation for an ecoregion of global relevance
Erdsicht : Einblicke in geographische und geoinformationstechnische Arbeitsweisen 23
Ibidem-Verlag, Stuttgart, p. 335 - 346 - Müller, S., Schleinitz, K. (2015):
Flow cytometry and microbial community fingerprinting
In: Wilkinson, M.G. (ed.)
Flow cytometry in microbiology: Technology and applications
Caister Academic Press, Norfolk, p. 77 - 89 - Jahn, M. (2015):
Characterization of population heterogeneity in a model biotechnological process using Pseudomonas putida
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
115 pp. - Hochstrat, R., Schlosser, D., Corvini, P., Wintgens, T. (2015):
Introduction
In: Hochstrat, R., Wintgens, T., Corvini, P. (eds.)
Immobilised biocatalysts for bioremediation of groundwater and wastewater
IWA Publishing, London, p. 1 - 14 - Ardao, I., Agathos, S.N., Ammann, E., Aluenta, F., Corvini, P., Frascari, D., Majone, M., Hochstrat, R., Hofmann, U., Kolvenbach, B., Schlosser, D., Zanaroli, G. (2015):
Immobilization techniques for biocatalysts
In: Hochstrat, R., Wintgens, T., Corvini, P. (eds.)
Immobilized biocatalysts for bioremediation of groundwater and wastewater
IWA Publishing, London, p. 49 - 69
2014 (11)
- Wick, L.Y., Qin, J. (2014):
Electrobioremediation of organic contaminants
In: Kreysa, G., Ota, K.-I., Savinell, R.F. (eds.)
Encyclopedia of Applied Electrochemistry, Vol. 1: A - E
Springer, New York, p. 392 - 397
Volltext (DOI) - Solé, M., Schlosser, D. (2014):
Xenobiotics form human impacts
In: Krauss, G.-J., Nies, D.H. (eds.)
Ecological biochemistry : environmental and interspecies interactions
Wiley-VCH, Weinheim, p. 259 - 275 - Siegfried, K., Hahn-Tomer, S., Osterwalder, E., Pal, S., Mazumdar, A., Chakrabarti, R. (2014):
Demonstration of the genetically modified ARSOlux biosensor in Jyot Sujan, West Bengal, India
In: Litter, M.I., Nicolli, H.B., Meichtry, M., Quici, N., Bundschuh, J., Bhattacharya, P., Naidu, R. (eds.)
One Century of the Discovery of Arsenicosis in Latin America (1914-2014) As2014. Proceedings of the 5th International Congress on Arsenic in the Environment, May 11-16, 2014, Buenos Aires, Argentina
CRC Press, Boca Raton, FL, p. 867 - 869
Volltext (DOI) - Schumann, J., Koch, C., Günther, S., Fetzer, I., Müller, S. (2014):
flowCHIC: Analyze flow cytometric data using histogram information
R package version 1.0.0
http://www.bioconductor.org/packages/release/bioc/html/flowCHIC.html
October 2014: 5 downloads (distinct IPs: ~500)
Volltext (URL) - Schumann, J., Koch, C., Günther, S., Fetzer, I., Müller, S. (2014):
flowCyBar: Analyze flow cytometric data using gate information
R package version 1.2.0
http://www.bioconductor.org/packages/release/bioc/html/flowCyBar.html
October 2014: 1491 downloads (distinct IPs: December 2014: ~2000)
Volltext (URL) - Schröder, U., dos Santos, T., Nilges, P., Harnisch, F. (2014):
„Electrofuels“ – Elektrochemie als Werkzeug für nachhaltige Kraftstoffsynthesen
In: Krahl, J., Munack, A., Bünger, J., Eilts, P. (Hrsg.)
Kraftstoffe für die Mobilität von morgen : 1. Tagung der Fuels Joint Research Group am 24. und 25. September 2014 in Braunschweig
Fuels Joint Research Group - Interdisziplinäre Kraftstoffforschung für die Mobilität der Zukunft 10
Cuvillier, Göttingen, S. 25 - 26 - Schlosser, D., Krauss, G.-J. (2014):
Sensing of pollutant effects and bioremediation
In: Krauss, G.-J., Nies, D.H. (eds.)
Ecological biochemistry : environmental and interspecies interactions
Wiley-VCH, Weinheim, p. 333 - 340 - Morais, F.M., Buchholz, F., Maskow, T. (2014):
Chip calorimetry for evaluation of biofilm treatment with biocides, antibiotics, and biological agents
In: Donelli, G. (ed.)
Microbial biofilms: methods and protocols
Methods in Molecular Biology 1147
Springer Nature, p. 267 - 275
Volltext (DOI) - Hahn-Tomer, S., Siegfried, K., Chatzinotas, A., Kuppardt, A., Harms, H. (2014):
ARSOlux—arsenic biosensor based on bioreporter bacteria
In: Litter, M.I., Nicolli, H.B., Meichtry, M., Quici, N., Bundschuh, J., Bhattacharya, P., Naidu, R. (eds.)
One Century of the Discovery of Arsenicosis in Latin America (1914-2014) As2014. Proceedings of the 5th International Congress on Arsenic in the Environment, May 11-16, 2014, Buenos Aires, Argentina
CRC Press, Boca Raton, FL, p. 207 - 208
Volltext (DOI) - Gharasoo, M. (2014):
Reactive transport simulations of microbial activity and biogeochemical transformations in porous environments: development and application of a pore-network model = Reactief transport simulaties van microbiele aktiviteit en biogeochemische transformaties in poreuze milieus: een porie-netwerkmodel ontwikkeling en toepassing
Dissertation
Utrecht Studies in Earth Sciences 59
Utrecht University, Utrecht, 103 pp. - Bühligen, F. (2014):
Functional properties of lager brewing yeast cells in industrial repitching processes
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
118 pp.
2013 (4)
- Vogt, J., Stahl, F., Scheper, T., Müller, S. (2013):
Isolation of intact RNA from sorted S. cerevisiae cells for differential gene expression analysis
In: Gupta, V.K., Tuohy, M., Ayyachamy, M., Turner, K.M., O’Donovan, A. (eds.)
Laboratory protocols in fungal biology : current methods in fungal biology
Fungal Biology
Springer, New York, p. 265 - 277
Volltext (DOI) - Schröder, U., Harnisch, F. (2013):
From microbial bioelectrocatalysis to microbial bioelectrochemical systems
In: Alkire, R.C., Kolb, D.M., Lipkowski, J., Kibler, L. (eds.)
Electrocatalysis : Theoretical Foundations and Model Experiments
Advances in Electrochemical Sciences and Engineering 14
Wiley-VCH, p. 137 - 162 - Koch, C. (2013):
Monitoring microbial community dynamics with flow cytometry
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
127 pp. - Giebler, J. (2013):
Processes driving the structure and function of alkane degrading bacterial communities at soil biogeochemical interfaces
Dissertation, Universität Leipzig, Fakultät für Biowissenschaften, Pharmazie und Psychologie
100, IX pp.
2012 (10)
- Zielinski, F.U., Dubilier, N. (2012):
Der Eukaryoten-Zellkern als ökologische Nische für Bakterien
In: Jahn, D. (Hrsg.)
Zellbiologie und Mikrobiologie : das Beste aus BIOspektrum
Springer Spektrum, Berlin, Heidelberg, S. 114 - 116 - Wick, L.Y., Liess, M., Wendt-Potthoff, K., Schattenhofer, M. (2012):
The Helmholtz-Alberta Initiative: UFZ contributions to sustainable oil sands tailings water management
1st UFZ Energy Days 2012: 4-5 April 2012 ; book of abstracts
UFZ-Bericht 6/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, p. 51 - Wells, M. (2012):
Polycyclic aromatic hydrocarbon (PAH) sensitive bacterial biosensors in environmental health
In: Preedy, V.R., Patel, V.B. (eds.)
Biosensors and environmental health
Science Publishers, Boca Raton, FL, p. 170 - 190 - Singh, S., Schlosser, D. (2012):
Fungal pre-treatment of lignocellulosic feedstock to improve biogas production
1st UFZ Energy Days 2012: 4-5 April 2012 ; book of abstracts
UFZ-Bericht 6/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, p. 9 - Maskow, T., Paufler, S., Sträuber, H., Kleinsteuber, S. (2012):
The potential of calorespirometry for control and analysis of biogas processes
1st UFZ Energy Days 2012: 4-5 April 2012 ; book of abstracts
UFZ-Bericht 6/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, p. 8 - Kopinke, F.-D., Harms, H. (2012):
BuildMoNa's fourth year - a principal investigator's view. Different perspectives on the same matter
BuildMoNa : graduate school Building with Molecules and Nano-objects. Annual report 2011
Universität Leipzig, Leipzig, p. 88 - 89 - Hanzel, J. (2012):
Impact of vapor-phase contaminants on microbial growth and chemotaxis
Dissertation, Universität Leipzig
PhD Dissertation 4/2012
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, 102 pp.
Volltext (URL) - De Biase, C., Maier, U., Oswald, S., Thullner, M. (2012):
Reactive transport simulation of volatile organic compound removal in vertical flow soil filters
ModelCare 2011: Models – Repositories of Knowledge. 8th International Conference on Calibration and Reliability in Groundwater Modeling, 18-22 September 2011, Helmholtz Centre for Environmental Research – UFZ, Leipzig, Germany - Book of Abstracts
p. 62 - Baarfuss, R., Blum, N., Conrads, C., Flecker, J., Huber Brösamle, A., Köster, R., Strobel, K., Wick, L.Y. (Hrsg., 2012):
Wirksames Management in der Wissenschaft : die eigene Arbeitsgruppe erfolgreich führen
Campus, Frankfurt/Main, 176 S. - Aurich, A., Specht, R., Müller, R.A., Stottmeister, U., Yovkova, V., Otto, C., Holz, M., Barth, G., Heretsch, P., Thomas, F.A., Sicker, D., Giannis, A. (2012):
Microbiologically produced carboxylic acids used as building blocks in organic synthesis
In: Wang, X., Chen, J., Quinn, P. (eds.)
Subcellular biochemistry, Volume 64; Reprogramming microbial metabolic pathways, Part 2
Springer, Berlin, Heidelberg, New York, p. 391 - 424
Volltext (DOI)
2011 (7)
- Schattenhofer, M., Wendeberg, A. (2011):
Capturing microbial populations for environmental genomics
In: de Bruijn, F.J. (ed.)
Handbook of molecular microbial ecology I : metagenomics and complementary approaches
Wiley-Blackwell, Hoboken, NJ, p. 735 - 740 - Müller, S., Johnson, D.R. (2011):
Application of cytomics to separate natural microbial communities by their physiological properties
In: de Bruijn, F.J. (ed.)
Handbook of molecular microbial ecology I : metagenomics and complementary approaches
Wiley-Blackwell, Hoboken, NJ, p. 727 - 734 - Müller, S., Bley, T. (eds., 2011):
High resolution microbial single cell analytics
Adv. Biochem. Eng. Biotechnol. 124
Springer, Berlin, Heidelberg, 233 pp.
Volltext (DOI) - Jacob, U., Thierry, A., Brose, U., Arntz, W.E., Berg, S., Brey, T., Fetzer, I., Jonsson, T., Mintenbeck, K., Möllmann, C., Petchey, O.L., Riede, J.O., Dunne, J.A. (2011):
The role of body size in complex food webs: a cold case
In: Belgrano, A., Reiss, J. (eds.)
The role of body size in multispecies systems
Advances in Ecological Research 45
Academic Press / Elsevier, London, p. 181 - 223
Volltext (DOI) - Headley, T., Nivala, J., Olsson, L., Weichert, G., Kassa, K., van Afferden, M., Müller, R. (2011):
Removal of E. coli in subsurface flow constructed wetlands - effect of plants and design
Society of Wetland Scientists (SWS) and Wetland Pollutant Dynamics and Control (WETPOL) Conference, 3 - 8 July 2011, Prague (CZ) - Dattagupta, S., Zielinski, F. (2011):
Symbiosis
In: Reitner, J., Thiel, V., Kappler, A., Konhauser, K., Núñez, A.E., Reid, P., Zhang, X. (eds.)
Encyclopedia of geobiology
Encyclopedia of Earth Sciences Series 17
Springer, Dordrecht, p. 866 - 870
Volltext (DOI) - Bombach, P., Hübschmann, T., Fetzer, I., Kleinsteuber, S., Geyer, R., Harms, H., Müller, S. (2011):
Resolution of natural microbial community dynamics by community fingerprinting, flow cytometry, and trend interpretation analysis
In: Müller, S., Bley, T. (eds.)
High resolution microbial single cell analytics
Adv. Biochem. Eng. Biotechnol. 124
Springer, Berlin, Heidelberg, p. 151 - 181
Volltext (DOI)
2010 (13)
- Wick, L.Y., Furuno, S., Harms, H. (2010):
Fungi as transport vectors for contaminants and contaminant-degrading bacteria
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 8
Springer International Publishing, Cham, p. 1555 - 1561
Volltext (DOI) - van Afferden, M., Rahman, K., Mosig, P., De Biase, C., Thullner, M., Oswald, S., Müller, R. (2010):
Development, technical design and cost estimation of a Vertical Flow Soil Filter System for the remediation of groundwater contaminated with MTBE and benzene
ConSoil 2010, 22 - 24 September 2010 Salzburg, Austria ; Proceedings 11th International UFZ-Deltares - TNO Conference on Management of Soil, Groundwater & Sediments. Theme: A: Restoration; ThS_A19: Special subjects
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, - Thullner, M., De Biase, C., Hanzel, J., Reger, D., Wick, L., Oswald, S., van Afferden, M., Schmidt, A., Reiche, N., Jechalke, S. (2010):
Assessing the fate of biodegradable volatile organic contaminants in unsaturated soil filter systems
EGU General Assembly 2010, Vienna, Austria, 02–07 May 2010
Geophysical Research Abstracts 12
European Geosciences Union (EGU), p. EGU2010-13748 - Pernthaler, A. (2010):
Identification of environmental microorganisms by fluorescence in situ hybridization
In: Timmis, K.N., McGenity, T., van der Meer, J.R., de Lorenzo, V. (eds.)
Experimental protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 3
Springer International Publishing, Cham, p. 4127 - 4135
Volltext (DOI) - Müller, S. (2010):
Functional flow cytometry in environmental microbiology
In: Timmis, K.N., McGenity, T., van der Meer, J.R., de Lorenzo, V. (eds.)
Experimental protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 3
Springer International Publishing, Cham, p. 4103 - 4112
Volltext (DOI) - Müller, S., Bley, T. (2010):
Flow cytometry
In: Flickinger, M.C. (ed.)
Encyclopedia of industrial biotechnology: bioprocess, bioseparation, and cell technology, Vol. 4
Wiley, Oxford, p. 2451 - 2467
Volltext (DOI) - Kuppardt, A. (2010):
Improvement of bioreporter bacteria-based test systems for the analysis of arsenic in drinking water and the rhizosphere
Dissertation, Universität Leipzig
PhD Dissertation 2/2010
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, 87 pp.
Volltext (URL) - Herrmann, S. (2010):
Molecular biological, physiological and isotope chemical analyses of BTEX (bio)degradation processes within a contaminated aquifer
Dissertation, TU Bergakademie Freiberg
PhD Dissertation 8/2010
Helmholtz-Zentrum für Umweltforschung - UFZ, Leipzig, 189 pp. - Heipieper, H.J., Martínez, P.M. (2010):
Toxicity of hydrocarbons to microorganisms
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 9
Springer International Publishing, Cham, p. 1565 - 1573
Volltext (DOI) - Harms, H., Wick, L.Y. (2010):
Determining the tendency of microorganisms to interact with hydrocarbon phases
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Experimantal protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 2
Springer International Publishing, Cham, p. 3631 - 3639
Volltext (DOI) - Harms, H., Wick, L.Y., Smith, K.E.C. (2010):
Matrix-hydrophobic compound interactions
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 7
Springer International Publishing, Cham, p. 1467 - 1478
Volltext (DOI) - Harms, H., Smith, K.E.C., Wick, L.Y. (2010):
Microorganism-hydrophobic compound interactions
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 7
Springer International Publishing, Cham, p. 1479 - 1490
Volltext (DOI) - Harms, H., Smith, K.E.C., Wick, L.Y. (2010):
Introduction: problems of hydrophobicity/bioavailability
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 7
Springer International Publishing, Cham, p. 1439 - 1450
Volltext (DOI)