Dr. Nico Jehmlich
Arbeitsgruppenleiter Mikrobiombiologie
Kontakt
Helmholtz-Zentrum
für Umweltforschung - UFZ
Department Molekulare Systembiologie
Permoserstr. 15, 04318 Leipzig
Telefon: +49 341 235 4767
Fax: +49 314 235 450823
Wissenschaftsnetzwerke
Forschungsschwerpunkte
- Qualitative und quantitative mikrobielle Proteomik
- Metaproteomische Analysen
- Mikrobiombiologie von terrestrischen mikrobiellen Gemeinschaften
- Identifikation von mikrobiellen Schlüsselorganismen mit Protein-SIP
Lebenslauf
| seit 2013 |
Leiter Mikrobiom Biologie Gruppe Helmholtz-Zentrum für Umweltforschung, Leipzig |
| 2009 - 2013 |
PostDoc, Funktionelle Genomforschung Universität Greifswald |
| 2010 - 2011 |
PostDoc Fellow, Department für Biochemie Vanderbilt Universität, Nashville, USA |
| 2006 - 2009 |
PhD Student, Department für Proteomik Helmholtz-Zentrum für Umweltforschung, Leipzig |
| 2001 - 2006 |
Dipl. Biologie Universität Leipzig |
Publikationen
2022 (12)
- Brede, M., Haange, S.-B., Riede, S., Engelmann, B., Jehmlich, N., Rolle-Kampczyk, U.E., Rohn, K., Von Soosten, D., von Bergen, M., Breves, G., (2022):
Effects of different formulations of glyphosate on rumen microbial metabolism and microbial community composition in the Rumen Simulation Technique system
Front. Microbiol. 13 , art. 873101
Volltext (DOI) - Dey, P., Malik, A., Singh, D.K., Haange, S.-B., von Bergen, M., Jehmlich, N., (2022):
Insight to the molecular mechanisms underpinning the mycoremediation of multiple metals by proteomic technique
Front. Microbiol. 13 , art. 872576
Volltext (DOI) - Fernandes, M.L.P., Bastida, F., Jehmlich, N., Martinović, T., Větrovský, T., Baldrian, P., Delgado-Baquerizo, M., Starke, R., (2022):
Functional soil mycobiome across ecosystems
J. Proteomics 252 , art. 104428
Volltext (DOI) - Jacoby, C., Ebenau-Jehle, C., Saum, K., Jehmlich, N., von Bergen, M., Brüls, T., Boll, M., (2022):
Genes and enzymes involved in the biodegradation of the quaternary carbon compound pivalate in the denitrifying Thauera humireducens strain PIV-1
Environ. Microbiol. 24 (7), 3181 - 3194
Volltext (DOI) - Kipping, L., Gossner, M.M., Koschorreck, M., Muszynski, S., Maurer, F., Weiser, W., Jehmlich, N., Noll, M., (2022):
Emission of CO2 and CH4 from 13 deadwood tree species is linked to tree species identity and management intensity in forest and grassland habitats
Glob. Biogeochem. Cycles 36 (5), e2021GB007143
Volltext (DOI) - König, R., Kiebist, J., Kalmbach, J., Herzog, R., Schmidtke, K.-U., Kellner, H., Ullrich, R., Jehmlich, N., Hofrichter, M., Scheibner, K., (2022):
Novel unspecific peroxygenase from Truncatella angustata catalyzes the synthesis of bioactive lipid mediators
Microorganisms 10 (7), art. 1267
Volltext (DOI) - Kraft, B., Jehmlich, N., Larsen, M., Bristow, L.A., Könneke, M., Thamdrup, B., Canfield, D.E., (2022):
Oxygen and nitrogen production by an ammonia-oxidizing archaeon
Science 375 (6576), 97 - 100
Volltext (DOI) - Münzker, J., Haase, N., Till, A., Sucher, R., Haange, S.-B., Nemetschke, L., Gnad, T., Jäger, E., Chen, J., Riede, S.J., Chakaroun, R., Massier, L., Kovacs, P., Ost, M., Rolle-Kampczyk, U., Jehmlich, N., Weinert, J., Heiker, J.T., Klöting, N., Seeger, G., Morawski, M., Keitel, V., Pfeifer, A., von Bergen, M., Heeren, J., Krügel, U., Fenske, W.K., (2022):
Functional changes of the gastric bypass microbiota reactivate thermogenic adipose tissue and systemic glucose control via intestinal FXR-TGR5 crosstalk in diet-induced obesity
Microbiome 10 , art. 96
Volltext (DOI) - Puiggené, Ò., Cárdenas Espinosa, M.J., Schlosser, D., Thies, S., Jehmlich, N., Kappelmeyer, U., Schreiber, S., Wibberg, D., Kalinowski, J., Harms, H., Heipieper, H.J., Eberlein, C., (2022):
Extracellular degradation of a polyurethane oligomer involving outer membrane vesicles and further insights on the degradation of 2,4-diaminotoluene in Pseudomonas capeferrum TDA1
Sci. Rep. 12 , art. 2666
Volltext (DOI) - Schöne, C., Poehlein, A., Jehmlich, N., Adlung, N., Daniel, R., von Bergen, M., Scheller, S., Rother, M., (2022):
Deconstructing Methanosarcina acetivorans into an acetogenic archaeon
Proc. Natl. Acad. Sci. U.S.A. 119 (2), e2113853119
Volltext (DOI) - Schroeter, S.A., Eveillard, D., Chaffron, S., Zoppi, J., Kampe, B., Lohmann, P., Jehmlich, N., von Bergen, M., Sanchez-Arcos, C., Pohnert, G., Taubert, M., Küsel, K., Gleixner, G., (2022):
Microbial community functioning during plant litter decomposition
Sci. Rep. 12 , art. 7451
Volltext (DOI) - Taubert, M., Overholt, W.A., Heinze, B.M., Matanfack, G.A., Houhou, R., Jehmlich, N., von Bergen, M., Rösch, P., Popp, J., Küsel, K., (2022):
Bolstering fitness via CO2 fixation and organic carbon uptake: mixotrophs in modern groundwater
ISME J. 16 (4), 1153 - 1162
Volltext (DOI)
2021 (13)
- Anders, J., Petruschke, H., Jehmlich, N., Haange, S.-B., von Bergen, M., Stadler, P.F., (2021):
A workflow to identify novel proteins based on the direct mapping of peptide-spectrum-matches to genomic locations
BMC Bioinformatics 22 , art. 277
Volltext (DOI) - Bastida, F., Jehmlich, N., Starke, R., Benndorf, D., López-Mondéjar, R., Plaza, C., Freixino, Z., Ramírez-Ortuño, C., Ruiz-Navarro, A., Díaz-López, M., Vera, A., Moreno, J.L., Eldridge, D.J., García, C., Delgado-Baquerizo, M., (2021):
Structure and function of bacterial metaproteomes across biomes
Soil Biol. Biochem. 160 , art. 108331
Volltext (DOI) - Kasmanas, J.C., Bartholomäus, A., Borim Corrêa, F., Tal, T., Jehmlich, N., Herberth, G., von Bergen, M., Stadler, P.F., de Carvalho, A.C.P.L.F., Nunes da Rocha, U., (2021):
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
Nucleic Acids Res. 49 (D1), D743 - D750
Volltext (DOI) - Kimani, V., Ullrich, R., Büttner, E., Herzog, R., Kellner, H., Jehmlich, N., Hofrichter, M., Liers, C., (2021):
First dye-decolorizing peroxidase from an ascomycetous fungus secreted by Xylaria grammica
Biomolecules 11 (9), art. 1391
Volltext (DOI) - Kruse, S., Türkowsky, D., Birkigt, J., Matturro, B., Franke, S., Jehmlich, N., von Bergen, M., Westermann, M., Rossetti, S., Nijenhuis, I., Adrian, L., Diekert, G., Goris, T., (2021):
Interspecies metabolite transfer and aggregate formation in a co-culture of Dehalococcoides and Sulfurospirillum dehalogenating tetrachloroethene to ethene
ISME J. 15 (6), 1794 - 1809
Volltext (DOI) - Li, Q., Cooper, R.E., Wegner, C.-E., Taubert, M., Jehmlich, N., von Bergen, M., Küsel, K., (2021):
Insights into autotrophic activities and carbon flow in iron-rRich pelagic aggregates (iron snow)
Microorganisms 9 (7), art. 1368
Volltext (DOI) - Petruschke, H., Schori, C., Canzler, S., Riesbeck, S., Poehlein, A., Daniel, R., Frei, D., Segessemann, T., Zimmerman, J., Marinos, G., Kaleta, C., Jehmlich, N., Ahrens, C.H., von Bergen, M., (2021):
Discovery of novel community-relevant small proteins in a simplified human intestinal microbiome
Microbiome 9 , art. 55
Volltext (DOI) - Rughöft, S., Jehmlich, N., Gutierrez, T., Kleindienst, S., (2021):
Comparative proteomics of Marinobacter sp. TT1 reveals corexit impacts on hydrocarbon metabolism, chemotactic motility, and biofilm formation
Microorganisms 9 (1), art. 3
Volltext (DOI) - Starke, R., Fernandes, M.L.P., Morais, D.K., Odriozola, I., Baldrian, P., Jehmlich, N., (2021):
Explorative meta-analysis of 417 extant archaeal genomes to predict their contribution to the total microbiome functionality
Microorganisms 9 (2), art. 381
Volltext (DOI) - Starke, R., Schäpe, S.S., Jehmlich, N., von Bergen, M., (2021):
Protein stable isotope probing with H218O differentiated cold stress response at permissive temperatures from general growth at optimal conditions in Escherichia coli K12
Rapid Commun. Mass Spectrom. 35 (1), e8941
Volltext (DOI) - Starke, R., Siles, J.A., Fernandes, M.L.P., Schallert, K., Benndorf, D., Plaza, C., Jehmlich, N., Delgado-Baquerizo, M., Bastida, F., (2021):
The structure and function of soil archaea across biomes
J. Proteomics 237 , art. 104147
Volltext (DOI) - Van Den Bossche, T., Arntzen, M.Ø., Becher, D., Benndorf, D., Eijsink, V.G.H., Henry, C., Jagtap, P.D., Jehmlich, N., Juste, C., Kunath, B.J., Mesuere, B., Muth, T., Pope, P.B., Seifert, J., Tanca, A., Uzzau, S., Wilmes, P., Hettich, R.L., Armengaud, J., (2021):
The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes
Microbiome 9 , art. 243
Volltext (DOI) - Van Den Bossche, T., Kunath, B.J., Schallert, K., Schäpe, S.S., Abraham, P.E., Armengaud, J., Arntzen, M.Ø., Bassignani, A., Benndorf, D., Fuchs, S., Giannone, R.J., Griffin, T.J., Hagen, L.H., Halder, R., Henry, C., Hettich, R.L., Heyer, R., Jagtap, P., Jehmlich, N., Jensen, M., Juste, C., Kleiner, M., Langella, O., Lehmann, T., Leith, E., May, P., Mesuere, B., Miotello, G., Peters, S.L., Pible, O., Queiros, P.T., Reichl, U., Renard, B.Y., Schiebenhoefer, H., Sczyrba, A., Tanca, A., Trappe, K., Trezzi, J.-P., Uzzau, S., Verschaffelt, P., von Bergen, M., Wilmes, P., Wolf, M., Martens, L., Muth, T., (2021):
Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows
Nat. Commun. 12 , art. 7305
Volltext (DOI)
2020 (23)
- Ananbeh, H., Merlos Rodrigo, M.A., Jelinkova, P., Strmiska, V., Splichal, Z., Jehmlich, N., Michalkova, H., Stojanović, M., Voberkova, S., Adam, V., Moulick, A., (2020):
Soil protein as a potential antimicrobial agent against methicillin-resistant Staphylococcus aureus
Environ. Res. 188 , art. 109320
Volltext (DOI) - Dey, P., Malik, A., Mishra, A., Singh, D.K., von Bergen, M., Jehmlich, N., (2020):
Mechanistic insight to mycoremediation potential of a metal resistant fungal strain for removal of hazardous metals from multimetal pesticide matrix
Environ. Pollut. 262 , art. 114255
Volltext (DOI) - Farag, M.A., Abdelwareth, A., Sallam, I.E., el Shorbagi, M., Jehmlich, N., Fritz, K., Schaepe, S., Rolle-Kampczyk, U., Ehrlich, A., Wessjohann, L.A., von Bergen, M., (2020):
Metabolomics reveals impact of seven functional foods on metabolic pathways in a gut microbiota model
J. Adv. Res. 23 , 47 - 59
Volltext (DOI) - Fritz-Wallace, K., Engelmann, B., Krause, J.L., Schäpe, S.S., Pöppe, J., Herberth, G., Rösler, U., Jehmlich, N., von Bergen, M., Rolle-Kampczyk, U., (2020):
Quantification of glyphosate and AMPA from microbiome reactor fluids
Rapid Commun. Mass Spectrom. 34 (7), e8668
Volltext (DOI) - Haange, S.-B., Jehmlich, N., Krügel, U., Hintschich, C., Wehrmann, D., Hankir, M., Seyfried, F., Froment, J., Hübschmann, T., Müller, S., Wissenbach, D.K., Kang, K.H., Buettner, C., Panagiotou, G., Noll, M., Rolle-Kampczyk, U., Fenske, W., von Bergen, M., (2020):
Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss
Microbiome 8 , art. 13
Volltext (DOI) - Jacoby, C., Krull, J., Andexer, J., Jehmlich, N., von Bergen, M., Brüls, T., Boll, M., (2020):
Channeling C1 metabolism toward S-adenosylmethionine-dependent conversion of estrogens to androgens in estrogen-degrading bacteria
mBio 11 (4), e01259-20
Volltext (DOI) - Kipping, L., Holzscheck, N., Maurer, F., Muszynski, S., Noll, M., Jehmlich, N., (2020):
Microbial metaproteome data from decayed beech dead wood
Data Brief 29 , art. 105285
Volltext (DOI) - Krause, J.L., Haange, S.-B., Schäpe, S.S., Engelmann, B., Rolle-Kampczyk, U., Fritz-Wallace, K., Wang, Z., Jehmlich, N., Türkowsky, D., Schubert, K., Pöppe, J., Bote, K., Rösler, U., Herberth, G., von Bergen, M., (2020):
The glyphosate formulation Roundup® LB plus influences the global metabolome of pig gut microbiota in vitro
Sci. Total Environ. 745 , art. 140932
Volltext (DOI) - Krause, J.L., Schaepe, S.S., Fritz-Wallace, K., Engelmann, B., Rolle-Kampczyk, U., Kleinsteuber, S., Schattenberg, F., Liu, Z., Müller, S., Jehmlich, N., von Bergen, M., Herberth, G., (2020):
Following the community development of SIHUMIx – a new intestinal in vitro model for bioreactor use
Gut Microbes 11 (4), 1116 - 1129
Volltext (DOI) - Krause, J.L., Schäpe, S.S., Schattenberg, F., Müller, S., Ackermann, G., Rolle-Kampczyk, U.E., Jehmlich, N., Pierzchalski, A., von Bergen, M., Herberth, G., (2020):
The activation of mucosal-associated invariant T (MAIT) cells is affected by microbial diversity and riboflavin utilization in vitro
Front. Microbiol. 11 , art. 755
Volltext (DOI) - Lohmann, P., Benk, S., Gleixner, G., Potthast, K., Michalzik, B., Jehmlich, N., von Bergen, M., (2020):
Seasonal patterns of dominant microbes involved in central nutrient cycles in the subsurface
Microorganisms 8 (11), art. 1694
Volltext (DOI) - Lohmann, P., Schäpe, S.S., Haange, S.-B., Oliphant, K., Allen-Vercoe, E., Jehmlich, N., von Bergen, M., (2020):
Function is what counts: how microbial community complexity affects species, proteome and pathway coverage in metaproteomics
Expert Rev. Proteomics 17 (2), 163 - 173
Volltext (DOI) - Mendler, A., Geier, F., Haange, S.-B., Pierzchalski, A., Krause, J.L., Nijenhuis, I., Froment, J., Jehmlich, N., Berger, U., Ackermann, G., Rolle-Kampczyk, U., von Bergen, M., Herberth, G., (2020):
Mucosal-associated invariant T-Cell (MAIT) activation is altered by chlorpyrifos- and glyphosate-treated commensal gut bacteria
J. Immunotoxicol. 17 (1), 10 - 20
Volltext (DOI) - Meyer-Cifuentes, I.E., Werner, J., Jehmlich, N., Will, S.E., Neumann-Schaal, M., Öztürk, B., (2020):
Synergistic biodegradation of aromatic-aliphatic copolyester plastic by a marine microbial consortium
Nat. Commun. 11 , art. 5790
Volltext (DOI) - Meyer-Cifuentes, I., Gruhl, S., Haange, S.-B., Lünsmann, V., Jehmlich, N., von Bergen, M., Heipieper, H.J., Müller, J.A., (2020):
Benzylsuccinate synthase is post-transcriptionally regulated in the toluene-degrading denitrifier Magnetospirillum sp. strain 15-1
Microorganisms 8 (5), art. 681
Volltext (DOI) - Pereira, F.C., Wasmund, K., Cobankovic, I., Jehmlich, N., Herbold, C.W., Lee, K.S., Sziranyi, B., Vesely, C., Decker, T., Stocker, R., Warth, B., von Bergen, M., Wagner, M., Berry, D., (2020):
Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization
Nat. Commun. 11 , art. 5104
Volltext (DOI) - Petruschke, H., Anders, J., Stadler, P.F., Jehmlich, N., von Bergen, M., (2020):
Enrichment and identification of small proteins in a simplified human gut microbiome
J. Proteomics 213 , art. 103604
Volltext (DOI) - Rohwerder, T., Rohde, M.-T., Jehmlich, N., Purswani, J., (2020):
Actinobacterial degradation of 2-hydroxyisobutyric acid proceeds via acetone and formyl-CoA by employing a thiamine-dependent lyase reaction
Front. Microbiol. 11 , art. 691
Volltext (DOI) - Ros, M., Blaya, J., Baldrian, P., Bastida, F., Richnow, H.H., Jehmlich, N., Pascual, J.A., (2020):
In vitro elucidation of suppression effects of composts to soil-borne pathogen Phytophthora nicotianae on pepper plants using 16S amplicon sequencing and metaproteomics
Renew. Agr. Food Syst. 35 (2), 206 - 214
Volltext (DOI) - Schäpe, S.S., Krause, J.L., Masanetz, R.K., Riesbeck, S., Starke, R., Rolle-Kampczyk, U., Eberlein, C., Heipieper, H.J., Herberth, G., von Bergen, M., Jehmlich, N., (2020):
Environmentally relevant concentration of bisphenol S shows slight effects on SIHUMIx
Microorganisms 8 (9), art. 1436
Volltext (DOI) - Starke, R., Capek, P., Morais, D., Callister, S.J., Jehmlich, N., (2020):
The total microbiome functions in bacteria and fungi
J. Proteomics 213 , art. 103623
Volltext (DOI) - Starke, R., Capek, P., Morais, D., Jehmlich, N., Baldrian, P., (2020):
Explorative meta-analysis of 377 extant fungal genomes predicted a total mycobiome functionality of 42.4 million KEGG functions
Front. Microbiol. 11 , art. 143
Volltext (DOI) - Starke, R., Oliphant, K., Jehmlich, N., Schäpe, S.S., Sachsenberg, T., Kohlbacher, O., Allen-Vercoe, E., von Bergen, M., (2020):
Tracing incorporation of heavy water into proteins for species-specific metabolic activity in complex communities
J. Proteomics 222 , art. 103791
Volltext (DOI)
2019 (16)
- Anselmann, S.E.L., Löffler, C., Stärk, H.-J., Jehmlich, N., von Bergen, M., Brüls, T., Boll, M., (2019):
The class II benzoyl‐coenzyme A reductase complex from the sulfate‐reducing Desulfosarcina cetonica
Environ. Microbiol. 21 (11), 4241 - 4252
Volltext (DOI) - Bastida, F., García, C., Fierer, N., Eldridge, D.J., Bowker, M.A., Abades, S., Alfaro, F.D., Berhe, A.A., Cutler, N.A., Gallardo, A., García-Velázquez, L., Hart, S.C., Hayes, P.E., Hernández, T., Hseu, Z.-Y., Jehmlich, N., Kirchmair, M., Lambers, H., Neuhauser, S., Peña-Ramírez, V.M., Pérez, C.A., Reed, S.C., Santos, F.A.M., Siebe, C., Sullivan, B.W., Trivedi, P., Vera, A., Williams, M.A., Moreno, J.L., Delgado-Baquerizo, M., (2019):
Global ecological predictors of the soil priming effect
Nat. Commun. 10 , art. 3481
Volltext (DOI) - Bastida, F., Jehmlich, N., Martínez-Navarro, J., Bayona, V., García, C., Moreno, J.L., (2019):
The effects of struvite and sewage sludge on plant yield and the microbial community of a semiarid Mediterranean soil
Geoderma 337 , 1051 - 1057
Volltext (DOI) - Bastida, F., López-Mondéjar, R., Baldrian, P., Andrés-Abellán, M., Jehmlich, N., Torres, I.F., García, C., López-Serrano, F.R., (2019):
When drought meets forest management: Effects on the soil microbial community of a Holm oak forest ecosystem
Sci. Total Environ. 662 , 276 - 286
Volltext (DOI) - Buettner, C., von Bergen, M., Jehmlich, N., Noll, M., (2019):
Pseudomonas spp. are key players in agricultural biogas substrate degradation
Sci. Rep. 9 , 12871
Volltext (DOI) - Geiger, R.A., Junghare, M., Mergelsberg, M., Ebenau‐Jehle, C., Jesenofsky, V.J., Jehmlich, N., von Bergen, M., Schink, B., Boll, M., (2019):
Enzymes involved in phthalate degradation in sulphate‐reducing bacteria
Environ. Microbiol. 21 (10), 3601 - 3612
Volltext (DOI) - Haange, S.-B., Jehmlich, N., Hoffmann, M., Weber, K., Lehmann, J., von Bergen, M., Slanina, J., (2019):
Disease development is accompanied by changes in bacterial protein abundance and functions in a refined model of dextran sulfate sodium (DSS)-induced colitis
J. Proteome Res. 18 (4), 1774 - 1786
Volltext (DOI) - Haange, S.-B., Jehmlich, N., Jacobi, T., von Bergen, M., (2019):
Chancen und Risiken von Metaproteomik in der Mikrobiomforschung. Opportunities and pitfalls of metaproteomics in microbiome research
Adipositas - Ursachen, Folgeerkrankungen, Therapie 13 (4), 205 - 213
Volltext (DOI) - Ke, X., Walker, A., Haange, S.-B., Lagkouvardos, I., Liu, Y., Schmitt-Kopplin, P., von Bergen, M., Jehmlich, N., He, X., Clavel, T., Cheung, P.C.K., (2019):
Synbiotic-driven improvement of metabolic disturbances is associated with changes in the gut microbiome in diet-induced obese mice
Mol. Metab. 22 , 96 - 109
Volltext (DOI) - Reina, R., Kellner, H., Hess, J., Jehmlich, N., García-Romera, I., Aranda, E., Hofrichter, M., Liers, C., (2019):
Genome and secretome of Chondrostereum purpureum correspond to saprotrophic and phytopathogenic life styles
PLOS One 14 (3), e0212769
Volltext (DOI) - Schäpe, S.S., Krause, J.L., Engelmann, B., Fritz-Wallace, K., Schattenberg, F., Liu, Z., Müller, S., Jehmlich, N., Rolle-Kampczyk, U., Herberth, G., von Bergen, M., (2019):
The simplified human intestinal microbiota (SIHUMIx) shows high structural and functional resistance against changing transit times in in vitro bioreactors
Microorganisms 7 (12), art. 641
Volltext (DOI) - Starke, R., Jehmlich, N., Alfaro, T., Dohnalkova, A., Capek, P., Bell, S.L., Hofmockel, K.S., (2019):
Incomplete cell disruption of resistant microbes
Sci. Rep. 9 , art. 5618
Volltext (DOI) - Starke, R., Jehmlich, N., Bastida, F., (2019):
Using proteins to study how microbes contribute to soil ecosystem services: The current state and future perspectives of soil metaproteomics
J. Proteomics 198 , 50 - 58
Volltext (DOI) - Taubert, M., Grob, C., Crombie, A., Howat, A.M., Burns, O.J., Weber, M., Lott, C., Kaster, A.-K., Vollmers, J., Jehmlich, N., von Bergen, M., Chen, Y., Murrell, J.C., (2019):
Communal metabolism by Methylococcaceae and Methylophilaceae is driving rapid aerobic methane oxidation in sediments of a shallow seep near Elba, Italy
Environ. Microbiol. 21 (10), 3780 - 3795
Volltext (DOI) - Türkowsky, D., Lohmann, P., Mühlenbrink, M., Schubert, T., Adrian, L., Goris, T., Jehmlich, N., von Bergen, M., (2019):
Thermal proteome profiling allows quantitative assessment of interactions between tetrachloroethene reductive dehalogenase and trichloroethene
J. Proteomics 192 , 10 - 17
Volltext (DOI) - Tveit, A.T., Hestnes, A.G., Robinson, S.L., Schintlmeister, A., Dedysh, S.N., Jehmlich, N., von Bergen, M., Herbold, C., Wagner, M., Richter, A., Svenning, M.M., (2019):
Widespread soil bacterium that oxidizes atmospheric methane
Proc. Natl. Acad. Sci. U.S.A. 116 (17), 8515 - 8524
Volltext (DOI)
2018 (14)
- Bastida, F., Crowther, T.W., Prieto, I., Routh, D., García, C., Jehmlich, N., (2018):
Climate shapes the protein abundance of dominant soil bacteria
Sci. Total Environ. 640–641 , 18 - 21
Volltext (DOI) - Bastida, F., Jehmlich, N., Torres, I.F., García, C., (2018):
The extracellular metaproteome of soils under semiarid climate: A methodological comparison of extraction buffers
Sci. Total Environ. 619–620 , 707 - 711
Volltext (DOI) - Becher, E., Heese, A., Claußen, L., Eisen, S., Jehmlich, N., Rohwerder, T., Purswani, J., (2018):
Active site alanine preceding catalytic cysteine determines unique substrate specificity in bacterial CoA‐acylating prenal dehydrogenase
FEBS Lett. 592 (7), 1150 - 1160
Volltext (DOI) - Cerdó, T., Ruiz, A., Acuña, I., Jáuregui, R., Jehmlich, N., Haange, S.-B., von Bergen, M., Suárez, A., Campoy, C., (2018):
Gut microbial functional maturation and succession during human early life
Environ. Microbiol. 20 (6), 2160 - 2177
Volltext (DOI) - Chupani, L., Niksirat, H., Lünsmann, V., Haange, S.-B., von Bergen, M., Jehmlich, N., Zuskova, E., (2018):
Insight into the modulation of intestinal proteome of juvenile common carp (Cyprinus carpio L.) after dietary exposure to ZnO nanoparticles
Sci. Total Environ. 613-614 , 62 - 71
Volltext (DOI) - Deutsch, E.W., Perez-Riverol, Y., Chalkley, R.J., Wilhelm, M., Tate, S., Sachsenberg, T., Walzer, M., Käll, L., Delanghe, B., Böcker, S., Schymanski, E.L., Wilmes, P., Dorfer, V., Kuster, B., Volders, P.-J., Jehmlich, N., Vissers, J.P.C., Wolan, D.W., Wang, A.Y., Mendoza, L., Shofstahl, J., Dowsey, A.W., Griss, J., Salek, R.M., Neumann, S., Binz, P.-A., Lam, H., Vizcaíno, J.A., Bandeira, N., Röst, H., (2018):
Expanding the use of spectral libraries in proteomics
J. Proteome Res. 17 (12), 4051 - 4060
Volltext (DOI) - Herbst, F.-A., Jehmlich, N., von Bergen, M., Schmidt, F., (2018):
Sulfur-34S and 36S stable isotope labeling of amino acids for quantification (SULAQ34/36) of proteome analyses
In: Becher, D., (ed.)
Microbial proteomics : methods and protocols
Methods in Molecular Biology 1841
Springer Nature, p. 163 - 174
Volltext (DOI) - Lechner, U., Türkowsky, D., Dinh, T.T.H., Al-Fathi, H., Schwoch, S., Franke, S., Gerlach, M.-S., Koch, M., von Bergen, M., Jehmlich, N., Dang, T.C.H., (2018):
Desulfitobacterium contributes to the microbial transformation of 2,4,5‐T by methanogenic enrichment cultures from a Vietnamese active landfill
Microb. Biotechnol. 11 (6), 1137 - 1156
Volltext (DOI) - Malik, A.A., Puissant, J., Buckeridge, K.M., Goodall, T., Jehmlich, N., Chowdhury, S., Gweon, H.S., Peyton, J.M., Mason, K.E., van Agtmaal, M., Blaud, A., Clark, I.A., Whitaker, J., Pywell, R.F., Ostle, N., Gleixner, G., Griffiths, R.I., (2018):
Land use driven change in soil pH affects microbial carbon cycling processes
Nat. Commun. 9 , art. 3591
Volltext (DOI) - Taubert, M., Stöckel, S., Geesink, P., Girnus, S., Jehmlich, N., von Bergen, M., Rösch, P., Popp, J., Küsel, K., (2018):
Tracking active groundwater microbes with D2O labelling to understand their ecosystem function
Environ. Microbiol. 20 (1), 369 - 384
Volltext (DOI) - Türkowsky, D., Esken, J., Goris, T., Schubert, T., Diekert, G., Jehmlich, N., von Bergen, M., (2018):
A retentive memory of tetrachloroethene respiration in Sulfurospirillum halorespirans - involved proteins and a possible link to acetylation of a two-component regulatory system
J. Proteomics 181 , 36 - 46
Volltext (DOI) - Türkowsky, D., Jehmlich, N., Diekert, G., Adrian, L., von Bergen, M., Goris, T., (2018):
An integrative overview of genomic, transcriptomic and proteomic analyses in organohalide respiration research
FEMS Microbiol. Ecol. 94 (3), fiy013
Volltext (DOI) - Vásquez-Piñeros, M.A., Martínez-Lavanchy, P.M., Jehmlich, N., Pieper, D.H., Rincón, C.A., Harms, H., Junca, H., Heipieper, H.J., (2018):
Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation
BMC Microbiol. 18 , art. 108
Volltext (DOI) - Wintsche, B., Jehmlich, N., Popp, D., Harms, H., Kleinsteuber, S., (2018):
Metabolic adaptation of methanogens in anaerobic digesters upon trace element limitation
Front. Microbiol. 9 , art. 405
Volltext (DOI)
2017 (13)
- Bastida, F., Torres, I.F., Andrés-Abellán, M., Baldrian, P., López-Mondéjar, R., Větrovský, T., Richnow, H.H., Starke, R., Ondoño, S., García, C., López-Serrano, F., Jehmlich, N., (2017):
Differential sensitivity of total and active soil microbial communities to drought and forest management
Glob. Change Biol. 23 (10), 4185 - 4203
Volltext (DOI) - Chupani, L., Zusková, É., Niksirat, H., Panáček, A., Lünsmann, V., Haange, S.-B., von Bergen, M., Jehmlich, N., (2017):
Effects of chronic dietary exposure of zinc oxide nanoparticles on the serum protein profile of juvenile common carp (Cyprinus carpio L.)
Sci. Total Environ. 579 , 1504 - 1511
Volltext (DOI) - Ebenau-Jehle, C., Mergelsberg, M., Fischer, S., Brüls, T., Jehmlich, N., von Bergen, M., Boll, M., (2017):
An unusual strategy for the anoxic biodegradation of phthalate
ISME J. 11 (1), 224 - 236
Volltext (DOI) - Herbold, C.W., Lehtovirta-Morley, L.E., Jung, M.-Y., Jehmlich, N., Hausmann, B., Han, P., Loy, A., Pester, M., Sayavedra-Soto, L.A., Rhee, S.-K., Prosser, J.I., Nicol, G.W., Wagner, M., Gubry-Rangin, C., (2017):
Ammonia-oxidising archaea living at low pH: Insights from comparative genomics
Environ. Microbiol. 19 , 4939 - 4952
Volltext (DOI) - Kadisch, M., Julsing, M.K., Schrewe, M., Jehmlich, N., Scheer, B., von Bergen, M., Schmid, A., Bühler, B., (2017):
Maximization of cell viability rather than biocatalyst activity improves whole-cell ω-oxyfunctionalization performance
Biotechnol. Bioeng. 114 (4), 874 - 884
Volltext (DOI) - Kiebist, J., Schmidtke, K.-U., Zimmermann, J., Kellner, H., Jehmlich, N., Ullrich, R., Zänder, D., Hofrichter, M., Scheibner, K., (2017):
A peroxygenase from Chaetomium globosum catalyzes the selective oxygenation of testosterone
ChemBioChem 18 (6), 563 - 569
Volltext (DOI) - Oberbach, A., Haange, S.-B., Schlichting, N., Heinrich, M., Lehmann, S., Till, H., Hugenholtz, F., Kullnick, Y., Smidt, H., Frank, K., Seifert, J., Jehmlich, N., von Bergen, M., (2017):
Metabolic in vivo labeling highlights differences of metabolically active microbes from the mucosal gastrointestinal microbiome between high-fat and normal chow diet
J. Proteome Res. 16 (4), 1593 - 1604
Volltext (DOI) - Pinaud, L., Ferrari, M.L., Friedman, R., Jehmlich, N., von Bergen, M., Phalipon, A., Sansonetti, P.J., Campbell-Valois, F.-X., (2017):
Identification of novel substrates of Shigella T3SA through analysis of its virulence plasmid-encoded secretome
PLOS One 12 (10), e0186920
Volltext (DOI) - Starke, R., Bastida, F., Abadía, J., García, C., Nicolás, E., Jehmlich, N., (2017):
Ecological and functional adaptations to water management in a semiarid agroecosystem: a soil metaproteomics approach
Sci. Rep. 7 , art. 10221
Volltext (DOI) - Starke, R., Müller, M., Gaspar, M., Marz, M., Küsel, K., Totsche, K.U., von Bergen, M., Jehmlich, N., (2017):
Candidate Brocadiales dominates C, N and S cycling in anoxic groundwater of a pristine limestone-fracture aquifer
J. Proteomics 152 , 153 - 160
Volltext (DOI) - Taubert, M., Grob, C., Howar, A.M., Burns, O.J., Pratscher, J., Jehmlich, N., von Bergen, M., Richnow, H.H., Chen, Y., Murrell, J.C., (2017):
Methylamine as a nitrogen source for microorganisms from a coastal marine environment
Environ. Microbiol. 19 (6), 2246 - 2257
Volltext (DOI) - Teumer, A., Qi, Q., Nethander, M., Aschard, H., Bandinelli, S., Beekman, M., Berndt, S.I., Bidlingmaier, M., Broer, L., Cappola, A., Ceda, G.P., Chanock, S., Chen, M.-H., Chen, T.C., Chen, Y.-D.I., Chung, J., Del Greco Miglianico, F., Eriksson, J., Ferrucci, L., Friedrich, N., Gnewuch, C., Goodarzi, M.O., Grarup, N., Guo, T., Hammer, E., Hayes, R.B., Hicks, A.A., Hofman, A., Houwing-Duistermaat, J.J., Hu, F., Hunter, D.J., Husemoen, L.L., Isaacs, A., Jacobs, K.B., Janssen, J.A.M.J.L., Jansson, J.-O., Jehmlich, N., Johnson, S., Juul, A., Karlsson, M., Kilpelainen, T.O., Kovacs, P., Kraft, P., Li, C., Linneberg, A., Liu, Y., Loos, R.J.F., Lorentzon, M., Lu, Y., Maggio, M., Magi, R., Meigs, J., Mellström, D., Nauck, M., Newman, A.B., Pollak, M.N., Pramstaller, P.P., Prokopenko, I., Psaty, B.M., Reincke, M., Rimm, R.B., Rotter, J.I., Saint Pierre, A., Schurmann, C., Seshadri, S., Sjögren, K., Slagboom, P.E., Strickler, H.D., Stumvoll, M., Suh, Y., Sun, Q., Zhang, C., Svensson, J., Tanaka, T., Tare, A., Tönjes, A., Uh, H.-W., van Duijn, C., van Heemst, D., Vandenput, L., Vasan, R.S., Völker, U., Willems, S.M., Ohlsson, C., Wallaschofski, H., Kaplan, R.C., (2017):
Erratum: Genomewide meta-analysis identifies loci associated with IGF-I and IGFBP-3 levels with impact on age-related traits (vol 15, pg 811, 2016)
Aging Cell 16 (4), 898
Volltext (DOI) - Warnke, M., Jacoby, C., Jung, T., Agne, M., Mergelsberg, M., Starke, R., Jehmlich, N., von Bergen, M., Richnow, H.-H., Brüls, T., Boll, M., (2017):
A patchwork pathway for oxygenase-independent degradation of side chain containing steroids
Environ. Microbiol. 19 (11), 4684 - 4699
Volltext (DOI)
2016 (20)
- Bastida, F., Jehmlich, N., (2016):
It's all about functionality: How can metaproteomics help us to discuss the attributes of ecological relevance in soil?
J. Proteomics 144 , 159 - 161
Volltext (DOI) - Bastida, F., Jehmlich, N., Lima, K., Morris, B.E.L., Richnow, H.H., Hernández, T., von Bergen, M., García, C., (2016):
The ecological and physiological responses of the microbial community from a semiarid soil to hydrocarbon contamination and its bioremediation using compost amendment
J. Proteomics 135 , 162 - 169
Volltext (DOI) - Bastida, F., Torres, I.F., Moreno, J.L., Baldrian, P., Ondoño, S., Ruiz-Navarro, A., Hernández, T., Richnow, H.H., Starke, R., García, C., Jehmlich, N., (2016):
The active microbial diversity drives ecosystem multifunctionality and is physiologically related to carbon availability in Mediterranean semi-arid soils
Mol. Ecol. 25 (18), 4660 - 4673
Volltext (DOI) - Dey, P., Gola, D., Mishra, A., Malik, A., Kumar, P., Singh, D.K., Patel, N., von Bergen, M., Jehmlich, N., (2016):
Comparative performance evaluation of multi-metal resistant fungal strains for simultaneous removal of multiple hazardous metals
J. Hazard. Mater. 318 , 679 - 685
Volltext (DOI) - Goris, T., Schiffmann, C.L., Gadkari, J., Adrian, L., von Bergen, M., Diekert, G., Jehmlich, N., (2016):
Proteomic data set of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates
Data Brief 8 , 637 - 642
Volltext (DOI) - Haange, S.-B., Jehmlich, N., (2016):
Proteomic interrogation of the gut microbiota: potential clinical impact
Expert Rev. Proteomics 13 (6), 535 - 537
Volltext (DOI) - Herbst, F.-A., Lünsmann, V., Kjeldal, H., Jehmlich, N., Tholey, A., von Bergen, M., Nielsen, J.L., Hettich, R.L., Seifert, J., Nielsen, P.H., (2016):
Enhancing metaproteomics—The value of models and defined environmental microbial systems
Proteomics 16 (5), 783 - 798
Volltext (DOI) - Jehmlich, N., Vogt, C., Lünsmann, V., Richnow, H.H., von Bergen, M., (2016):
Protein-SIP in environmental studies
Curr. Opin. Biotechnol. 41 , 26 - 33
Volltext (DOI) - Lünsmann, V., Kappelmeyer, U., Benndorf, R., Martínez-Lavanchy, P.M., Taubert, A., Adrian, L., Duarte, M., Pieper, D.H., von Bergen, M., Müller, J.A., Heipieper, H.J., Jehmlich, N., (2016):
In situ protein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model
Environ. Microbiol. 18 (4), 1176 - 1186
Volltext (DOI) - Lünsmann, V., Kappelmeyer, U., Taubert, A., Nijenhuis, I., von Bergen, M., Heipieper, H.J., Müller, J.A., Jehmlich, N., (2016):
Aerobic toluene degraders in the rhizosphere of a constructed wetland model show diurnal polyhydroxyalkanoate metabolism
Appl. Environ. Microb. 82 (14), 4126 - 4132
Volltext (DOI) - Malik, A.A., Chowdhury, S., Schlager, V., Oliver, A., Puissant, J., Vazquez, P.G.M., Jehmlich, N., von Bergen, M., Griffiths, R.I., Gleixner, G., (2016):
Soil fungal:bacterial ratios are linked to altered carbon cycling
Front. Microbiol. 7 , art. 1247
Volltext (DOI) - Men, Y., Han, P., Helbling, D.E., Jehmlich, N., Herbold, C., Gulde, R., Onnis-Hayden, A., Gu, A.Z., Johnson, D.R., Wagner, M., Fenner, K., (2016):
Biotransformation of two pharmaceuticals by the ammonia-oxidizing archaeon Nitrososphaera gargensis
Environ. Sci. Technol. 50 (9), 4682 - 4692
Volltext (DOI) - Oberbach, A., Adams, V., Schlichting, N., Heinrich, M., Kullnick, Y., Lehmann, S., Feder, S., Correia, J.C., Mohr, F.-W., Völker, U., Jehmlich, N., (2016):
Proteome profiles of HDL particles of patients with chronic heart failure are associated with immune response and also include bacteria proteins
Clin. Chim. Acta 453 , 114 - 122
Volltext (DOI) - Schaubeck, M., Clavel, T., Calasan, J., Lagkouvardos, I., Haange, S.B., Jehmlich, N., Basic, M., Dupont, A., Hornef, M., von Bergen, M., Bleich, A., Haller, D., (2016):
Dysbiotic gut microbiota causes transmissible Crohn's disease-like ileitis independent of failure in antimicrobial defence
Gut 65 , 225 - 237
Volltext (DOI) - Schiffmann, C.L., Otto, W., Hansen, R., Nielsen, P.H., Adrian, L., Seifert, J., von Bergen, M., Jehmlich, N., (2016):
Proteomic dataset of the organohalide-respiring bacterium Dehalococcoides mccartyi strain CBDB1 grown on hexachlorobenzene as electron acceptor
Data Brief 7 , 253 - 256
Volltext (DOI) - Starke, R., Keller, A., Jehmlich, N., Vogt, C., Richnow, H.H., Kleinsteuber, S., von Bergen, M., Seifert, J., (2016):
Pulsed 13C2-acetate protein-SIP unveils Epsilonproteobacteria as dominant acetate utilizers in a sulfate-reducing microbial community mineralizing benzene
Microb. Ecol. 71 (4), 901 - 911
Volltext (DOI) - Starke, R., Kermer, R., Ullmann-Zeunert, L., Baldwin, I.T., Seifert, J., Bastida, F., von Bergen, M., Jehmlich, N., (2016):
Bacteria dominate the short-term assimilation of plant-derived N in soil
Soil Biol. Biochem. 96 , 30 - 38
Volltext (DOI) - Teumer, A., Qi, Q., Nethander, M., Aschard, H., Bandinelli, S., Beekman, M., Berndt, S.I., Bidlingmaier, M., Broer, L., Cappola, A., Ceda, G.P., Chanock, S., Chen, M.-H., Chen, T.C., Chen, Y.-D.I., Chung, J., Del Greco Miglianico, F., Eriksson, J., Ferrucci, L., Friedrich, N., Gnewuch, C., Goodarzi, M.O., Grarup, N., Guo, T., Hammer, E., Hayes, R.B., Hicks, A.A., Hofman, A., Houwing-Duistermaat, J.J., Hu, F., Hunter, D.J., Husemoen, L.L., Isaacs, A., Jacobs, K.B., Janssen, J.A.M.J.L., Jansson, J.-O., Jehmlich, N., Johnson, S., Juul, A., Karlsson, M., Kilpelainen, T.O., Kovacs, P., Kraft, P., Li, C., Linneberg, A., Liu, Y., Loos, R.J.F., Lorentzon, M., Lu, Y., Maggio, M., Magi, R., Meigs, J., Mellström, D., Nauck, M., Newman, A.B., Pollak, M.N., Pramstaller, P.P., Prokopenko, I., Psaty, B.M., Reincke, M., Rimm, R.B., Rotter, J.I., Saint Pierre, A., Schurmann, C., Seshadri, S., Sjögren, K., Slagboom, P.E., Strickler, H.D., Stumvoll, M., Suh, Y., Sun, Q., Zhang, C., Svensson, J., Tanaka, T., Tare, A., Tönjes, A., Uh, H.-W., van Duijn, C., van Heemst, D., Vandenput, L., Vasan, R.S., Völker, U., Willems, S.M., Ohlsson, C., Wallaschofski, H., Kaplan, R.C., (2016):
Genomewide meta‐analysis identifies loci associated with IGF‐I and IGFBP‐3 levels with impact on age‐related traits
Aging Cell 15 (5), 811 - 824
Volltext (DOI) - Tiedt, O., Mergelsberg, M., Boll, K., Müller, M., Adrian, L., Jehmlich, N., von Bergen, M., Boll, M., (2016):
ATP-dependent C–F bond cleavage allows the complete degradation of 4-fluoroaromatics without oxygen
mBio 7 (4), e00990-16
Volltext (DOI) - Warnke, M., Jung, T., Dermer, J., Hipp, K., Jehmlich, N., von Bergen, M., Ferlaino, S., Fries, A., Müller, M., Boll, M., (2016):
25-hydroxyvitamin D3 synthesis by enzymatic steroid side-chain hydroxylation with water
Angew. Chem.-Int. Edit. 55 (5), 1881 - 1884
Volltext (DOI)
2015 (11)
- Bastida, F., García, C., von Bergen, M., Moreno, J.L., Richnow, H.H., Jehmlich, N., (2015):
Deforestation fosters bacterial diversity and the cyanobacterial community responsible for carbon fixation processes under semiarid climate: a metaproteomics study
Appl. Soil Ecol. 93 , 65 - 67
Volltext (DOI) - Daims, H., Lebedeva, E.V., Pjevac, P., Han, P., Herbold, C., Albertsen, M., Jehmlich, N., Palatinszky, M., Vierheilig, J., Bulaev, A., Kirkegaard, R.H., von Bergen, M., Rattei, T., Bendinger, B., Nielsen, P.H., Wagner, M., (2015):
Complete nitrification by Nitrospira bacteria
Nature 528 (7583), 504 - 509
Volltext (DOI) - Goris, T., Schiffmann, C.L., Gadkari, J., Schubert, T., Seifert, J., Jehmlich, N., von Bergen, M., Diekert, G., (2015):
Proteomics of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates
Sci. Rep. 5 , art. 13794
Volltext (DOI) - Grob, C., Taubert, M., Howat, A.M., Burns, O.J., Dixon, J.L., Richnow, H.H., Jehmlich, N., von Bergen, M., Chen, Y., Murrell, J.C., (2015):
Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph
Environ. Microbiol. 17 (10), 4007 - 4018
Volltext (DOI) - Hartwig, S., Thomas, C., Krumova, N., Quitzke, V., Türkowsky, D., Jehmlich, N., Adrian, L., Sawers, R.G., (2015):
Heterologous complementation studies in Escherichia coli with the Hyp accessory protein machinery from Chloroflexi provide insight into [NiFe]-hydrogenase large subunit recognition by the HypC protein family
Microbiology-(UK) 161 (11), 2204 - 2219
Volltext (DOI) - Kümmel, S., Herbst, F.-A., Bahr, A., Duarte, M., Pieper, D.H., Jehmlich, N., Seifert, J., von Bergen, M., Bombach, P., Richnow, H.H., Vogt, C., (2015):
Anaerobic naphthalene degradation by sulfate-reducing Desulfobacteraceae from various anoxic aquifers
FEMS Microbiol. Ecol. 91 (3), fiv006
Volltext (DOI) - Palatinszky, M., Herbold, C., Jehmlich, N., Pogoda, M., Han, P., von Bergen, M., Lagkouvardos, I., Karst, S.M., Galushko, A., Koch, H., Berry, D., Daims, H., Wagner, M., (2015):
Cyanate as an energy source for nitrifiers
Nature 524 (7563), 105 - 108
Volltext (DOI) - Pöritz, M., Schiffmann, C.L., Hause, G., Heinemann, U., Seifert, J., Jehmlich, N., von Bergen, M., Nijenhuis, I., Lechner, U., (2015):
Dehalococcoides mccartyi strain DCMB5 respires a broad spectrum of chlorinated aromatic compounds
Appl. Environ. Microb. 81 (2), 587 - 596
Volltext (DOI) - Sachsenberg, T., Herbst, F.-A., Taubert, M., Kermer, R., Jehmlich, N., von Bergen, M., Seifert, J., Kohlbacher, O., (2015):
MetaProSIP: Automated inference of stable isotope incorporation rates in proteins for functional metaproteomics
J. Proteome Res. 14 (2), 619 - 627
Volltext (DOI) - Schaubeck, M., Clavel, T., Lagkouvardos, M., Calasan, J., Haange, S.B., Jehmlich, N., von Bergen, M., Basic, M., Bleich, A., Haller, D., (2015):
Transmissive Crohn's disease-like ileitis is caused by functional dysbiosis in the intestinal microbiota independent of inflammation-driven Paneth cell failure
J. Crohns Colitis 9 (Suppl. 1), S1 - S1
Volltext (DOI) - Seyhan, D., Jehmlich, N., von Bergen, M., Fersch, J., Rother, M., (2015):
Selenocysteine-independent suppression of UGA codons in the archaeon Methanococcus maripaludis
Biochim. Biophys. Acta-Gen. Subj. 1850 , 2385 - 2392
Volltext (DOI)