2023 (3)

• Gerhards, M., Böhme, A., Schubert, K., Kodritsch, B., Ulrich, N. (2023):
  DNA adducts as link between in vitro and in vivo carcinogenicity – A case study with benzo[a]pyrene
  Curr. Res. Toxicol. 4 , art. 100097
  full text (doi)
• Gurbuz, B., Guldiken, N., Reuken, P., Fu, L., Remih, K., Preisinger, C., Brůha, R., Leníček, M., Petrtýl, J., Reissing, J., Aly, M., Fromme, M., Zhou, B., Karkossa, I., Schubert, K., von Bergen, M., Stallmach, A., Bruns, T., Strnad, P. (2023):
  Biomarkers of hepatocellular synthesis in patients with decompensated cirrhosis
  Hepatol. Int.
  full text (doi)
• Lipaeva, P., Karkossa, I., Bedulina, D., Schubert, K., Luckenbach, T. (2023):
  Cold-adapted amphipod species upon heat stress: Proteomic responses and their correlation with transcriptomic responses
  Comp. Biochem. Physiol. D-Genomics Proteomics 45 , art. 101048
  full text (doi)

2022 (5)

• Kage, P., Schubert, K., Treudler, R., Simon, J.-C., von Bergen, M., Tomm, J. (2022):
  Identification of new potential allergens from green-lipped mussel (Perna canaliculus)
  Iran. J. Allergy Asthma Immunol. 21 (6), 711 - 715
  full text (doi)
• Krieg, L., Didt, K., Karkossa, I., Bernhart, S.H., Kehr, S., Subramanian, N., Lindhorst, A., Schaudinn, A., Tabei, S., Keller, M., Stumvoll, M., Dietrich, A., von Bergen, M., Stadler, P.F., Laurencikiene, J., Krüger, M., Blüher, M., Gericke, M., Schubert, K., Kovacs, P., Chakaroun, R., Massier, L. (2022):
  Multiomics reveal unique signatures of human epiploic adipose tissue related to systemic insulin resistance
  Gut 71 (11), 2179 - 2193
  full text (doi)
• Lentz, L.S., Stutz, A.J., Meyer, N., Schubert, K., Karkossa, I., von Bergen, M., Zenclussen, A.C., Schumacher, A. (2022):
  Human chorionic gonadotropin promotes murine Treg cells and restricts pregnancy-harmful proinflammatory Th17 responses
  Front. Immunol. 13 , art. 989247
  full text (doi)
• Murthy, S., Karkossa, I., Schmidt, C., Hoffmann, A., Hagemann, T., Rothe, K., Seifert, O., Anderegg, U., von Bergen, M., Schubert, K., Rossol, M. (2022):
  Danger signal extracellular calcium initiates differentiation of monocytes into SPP1/osteopontin-producing macrophages
  Cell Death Dis. 13 , art. 53
  full text (doi)
• Schaffert, A., Karkossa, I., Ueberham, E., Schlichting, R., Walter, K., Arnold, J., Blüher, M., Heiker, J.T., Lehmann, J., Wabitsch, M., Escher, B.I., von Bergen, M., Schubert, K. (2022):
  Di-(2-ethylhexyl) phthalate substitutes accelerate human adipogenesis through PPARγ activation and cause oxidative stress and impaired metabolic homeostasis in mature adipocytes
  Environ. Int. 164 , art. 107279
  full text (doi)

2021 (14)

• Großkopf, H., Vogel, S., Müller, C.D., Köhling, S., Dürig, J.-N., Möller, S., Schnabelrauch, M., Rademann, J., Hempel, U., von Bergen, M., Schubert, K. (2021):
  Identification of intracellular glycosaminoglycan-interacting proteins by affinity purification mass spectrometry
  Biol. Chem. 402 (11), 1427 - 1440
  full text (doi)
• Großkopf, H., Walter, K., Karkossa, I., von Bergen, M., Schubert, K. (2021):
  Non-genomic AhR-signaling modulates the immune response in endotoxin-activated macrophages after activation by the environmental stressor BaP
  Front. Immunol. 12 , art. 620270
  full text (doi)
• Höper, T., Siewert, K., Dumit, V.I., von Bergen, M., Schubert, K., Haase, A. (2021):
  The contact allergen NiSO₄ triggers a distinct molecular response in primary human dendritic cells compared to bacterial LPS
  Front. Immunol. 12 , art. 644700
  full text (doi)
• Karkossa, I., Bannuscher, A., Hellack, B., Wohlleben, W., Laloy, J., Stan, M.S., Dinischiotu, A., Wiemann, M., Luch, A., Haase, A., von Bergen, M., Schubert, K. (2021):
  Nanomaterials induce different levels of oxidative stress, depending on the used model system: Comparison of in vitro and in vivo effects
  Sci. Total Environ. 801 , art. 149538
  full text (doi)
• Karkossa, I., Bannuscher, A., Hellack, B., Wohlleben, W., Laloy, J., Stan, M.S., Dinischiotu, A., Wiemann, M., Luch, A., Haase, A., von Bergen, M., Schubert, K. (2021):
  Omics reveal different oxidative stress levels induced by nanomaterials in vitro and in vivo
  Toxicol. Lett. 350 (Suppl.), S125
  full text (doi)
• Monikh, F.A., Chupani, L., Karkossa, I., Gardian, Z., Arenas-Logo, D., von Bergen, M., Schubert, K., Piackova, V., Zuskova, E., Jiskoot, W., Vijver, M.G., Peijnenburg, W.J.G.M. (2021):
  An environmental ecocorona influences the formation and evolution of the biological corona on the surface of single-walled carbon nanotubes
  NanoImpact 22 , art. 100315
  full text (doi)
• Nickel, S., Vlaic, S., Christ, M., Schubert, K., Henschler, R., Tautenhahn, F., Burger, C., Kühne, H., Erler, S., Roth, A., Wild, C., Brach, J., Hammad, S., Gittel, C., Baunack, M., Lange, U., Broschewitz, J., Stock, P., Metelmann, I., Bartels, M., Pietsch, U.-C., Krämer, S., Eichfeld, U., von Bergen, M., Dooley, S., Tautenhahn, H.-M., Christ, B. (2021):
  Mesenchymal stromal cells mitigate liver damage after extended resection in the pig by modulating thrombospondin-1/TGF-β
  npj Regen. Med. 6 , art. 84
  full text (doi)
• Schaffert, A., Arnold, J., Karkossa, I., Blüher, M., von Bergen, M., Schubert, K. (2021):
  The emerging plasticizer alternative DINCH and its metabolite MINCH induce oxidative stress and enhance inflammatory responses in human THP-1 macrophages
  Cells 10 (9), art. 2367
  full text (doi)
• Schaffert, A., Krieg, L., Weiner, J., Schlichting, R., Ueberham, E., Karkossa, I., Bauer, M., Landgraf, K., Junge, K.M., Wabitsch, M., Lehmann, J., Escher, B.I., Zenclussen, A.C., Körner, A., Blüher, M., Heiker, J.T., von Bergen, M., Schubert, K. (2021):
  Alternatives for the worse: Molecular insights into adverse effects of bisphenol a and substitutes during human adipocyte differentiation
  Environ. Int. 156 , art. 106730
  full text (doi)
• Schaffert, A., Krieg, L., Weinert, J., Schlichting, R., Ueberham, E., Karkossa, I., Bauer, M., Junge, K., Wabitsch, M., Lehmann, J., Escher, B.I., Zenclussen, A.C., Körner, A., Blüher, M., Heiker, J.T., von Bergen, M., Schubert, K. (2021):
  Emerging substitutes of BPA cause inflammation-like state and impaired insulin sensitivity in differentiating human adipocytes
  Toxicol. Lett. 350 (Suppl.), S130
  full text (doi)
• Schubert, K., Karkossa, I., Schor, J., Engelmann, B., Steinheuer, L.M., Bruns, T., Rolle-Kampczyk, U., Hackermüller, J., von Bergen, M. (2021):
  A multi-omics analysis of mucosal-associated-invariant T cells reveals key drivers of distinct modes of activation
  Front. Immunol. 12 , art. 616967
  full text (doi)
• Streidl, T., Karkossa, I., Segura Muñoz, R.R., Eberl, C., Zaufel, A., Plagge, J., Schmaltz, R., Schubert, K., Basic, M., Schneider, K.M., Afify, M., Trautwein, C., Tolba, R., Stecher, B., Doden, H.L., Ridlon, J.M., Ecker, J., Moustafa, T., von Bergen, M., Ramer-Tait, A.E., Clavel, T. (2021):
  The gut bacterium Extibacter muris produces secondary bile acids and influences liver physiology in gnotobiotic mice
  Gut Microbes 13 (1), 1 - 21
  full text (doi)
• Walter, K., Grosskopf, H., Karkossa, I., von Bergen, M., Schubert, K. (2021):
  Proteomic characterization of the cellular effects of AhR activation by microbial tryptophan catabolites in endotoxin-activated human macrophages
  Int. J. Environ. Res. Public Health 18 (19), 10336
  full text (doi)
• Wang, Z., Karkossa, I., Großkopf, H., Canzler, S., Rolle-Kampczyk, U., Hackermüller, J., von Bergen, M., Schubert, K. (2021):
  Quantitative proteomics reveal mechanistic insights into direct and indirect drug-induced thyroid toxicity in rats
  Toxicol. Lett. 350 (Suppl.), S129
  full text (doi)

2020 (9)

• Bannuscher, A., Karkossa, I., Buhs, S., Nollau, P., Kettler, K., Balas, M., Dinischiotu, A., Hellack, B., Wiemann, M., Luch, A., von Bergen, M., Haase, A., Schubert, K. (2020):
  A multi-omics approach reveals mechanisms of nanomaterial toxicity and structure–activity relationships in alveolar macrophages
  Nanotoxicology 14 (2), 181 - 195
  full text (doi)
• Canzler, S., Schor, J., Busch, W., Schubert, K., Rolle-Kampczyk, U.E., Seitz, H., Kamp, H., von Bergen, M., Buesen, R., Hackermüller, J. (2020):
  Prospects and challenges of multi‑omics data integration in toxicology
  Arch. Toxicol. 94 (2), 371 - 388
  full text (doi)
• Hsu, M.-J., Karkossa, I., Schäfer, I., Christ, M., Kühne, H., Schubert, K., Rolle-Kampczyk, U.E., Kalkhof, S., Nickel, S., Seibel, P., von Bergen, M., Christ, B. (2020):
  Mitochondrial transfer by human mesenchymal stromal cells ameliorates hepatocyte lipid load in a mouse model of NASH
  Biomedicines 8 (9), art. 350
  full text (doi)
• Kalkhof, S., Krieg, L., Büttner, P., Wabitsch, M., Küntzel, C., Friebe, D., Landgraf, K., Hanschkow, M., Schubert, K., Kiess, W., Krohn, K., Blüher, M., von Bergen, M., Körner, A. (2020):
  In depth quantitative proteomic and transcriptomic characterization of human adipocyte differentiation using the SGBS cell line
  Proteomics 20 (15-16), art. 1900405
  full text (doi)
• Karkossa, I., Raps, S., von Bergen, M., Schubert, K. (2020):
  Systematic review of multi-omics approaches to investigate toxicological effects in macrophages
  Int. J. Mol. Sci. 21 (24), art. 9371
  full text (doi)
• Krause, J.L., Haange, S.-B., Schäpe, S.S., Engelmann, B., Rolle-Kampczyk, U., Fritz-Wallace, K., Wang, Z., Jehmlich, N., Türkowsky, D., Schubert, K., Pöppe, J., Bote, K., Rösler, U., Herberth, G., von Bergen, M. (2020):
  The glyphosate formulation Roundup^® LB plus influences the global metabolome of pig gut microbiota in vitro
  Sci. Total Environ. 745 , art. 140932
  full text (doi)
• Krieg, L., Schaffert, A., Kern, M., Landgraf, K., Wabitsch, M., Beck-Sickinger, A.G., Koerner, A., Blüher, M., von Bergen, M., Schubert, K. (2020):
  An MRM-based multiplexed quantification assay for human adipokines and apolipoproteins
  Molecules 25 (4), art. 775
  full text (doi)
• Rolle-Kampczyk, U., Gebauer, S., Haange, S.-B., Schubert, K., Kern, M., Moulla, Y., Dietrich, A., Schön, M.R., Klöting, N., von Bergen, M., Blüher, M. (2020):
  Accumulation of distinct persistent organic pollutants is associated with adipose tissue inflammation
  Sci. Total Environ. 748 , art. 142458
  full text (doi)
• Wang, Z., Karkossa, I., Großkopf, H., Rolle-Kampczyk, U., Hackermüller, J., von Bergen, M., Schubert, K. (2020):
  Comparison of quantitation methods in proteomics to define relevant toxicological information on AhR activation of HepG2 cells by BaP
  Toxicology 448 , art. 152652
  full text (doi)

2019 (7)

• Großkopf, H., Schubert, K., von Bergen, M. (2019):
  AhR-dependent non-genomic signaling in macrophages - A multi-PTM-omics and proteomics study
  Eur. J. Immunol. 49 (Suppl. 1), 137
  full text (doi)
• Karkossa, I., Bannuscher, A., Hellack, B., Bahl, A., Buhs, S., Nollau, P., Luch, A., Schubert, K., von Bergen, M., Haase, A. (2019):
  An in-depth multi-omics analysis in RLE-6TN rat alveolar epithelial cells allows for nanomaterial categorization
  Part. Fibre Toxicol. 16 (1), art. 38
  full text (doi)
• Kratochvil, I., Bannuscher, A., Hellack, B., von Bergen, M., Haase, A., Schubert, K. (2019):
  Nanomaterials affect oxidative phosphorylation and phagocytosis in alveolar macrophages
  Eur. J. Immunol. 49 (Suppl. 1), 232
  full text (doi)
• Schmidt, J.R., Geurtzen, K., von Bergen, M., Schubert, K., Knopf, F. (2019):
  Glucocorticoid treatment leads to aberrant ion and macromolecular transport in regenerating zebrafish fins
  Front. Endocrinol. 10 , art. 674
  full text (doi)
• Schmidt, J.R., Vogel, S., Moeller, S., Kalkhof, S., Schubert, K., von Bergen, M., Hempel, U. (2019):
  Sulfated hyaluronic acid and dexamethasone possess a synergistic potential in the differentiation of osteoblasts from human bone marrow stromal cells
  J. Cell. Biochem. 120 (5), 8706 - 8722
  full text (doi)
• Schubert, K., Collins, L.E., Green, P., Nagase, H., Troeberg, L. (2019):
  LRP1 controls TNF release via the TIMP-3/ADAM17 axis in endotoxin-activated macrophages
  J. Immunol. 202 (4), 1501 - 1509
  full text (doi)
• Schubert, K., Schor, J., Kratochvil, I., Hackermüller, J., von Bergen, M. (2019):
  Multi-omics profiling of MAIT cells reveals specific patterns of antigen-dependent and -independent activation
  Eur. J. Immunol. 49 (Suppl. 1), 141
  full text (doi)

2018 (2)

• Firacative, C., Gressler, A.E., Schubert, K., Schulze, B., Müller, U., Brombacher, F., von Bergen, M., Alber, G. (2018):
  Identification of T helper (Th)1- and Th2-associated antigens of Cryptococcus neoformans in a murine model of pulmonary infection
  Sci. Rep. 8 , art. 2681
  full text (doi)
• Schmidt, J.R., Rücker-Braun, E., Heidrich, K., von Bonin, M., Stölzel, F., Thiede, C., Middeke, J.M., Ehninger, G., Bornhäuser, M., Schetelig, J., Schubert, K., von Bergen, M., Heidenreich, F. (2018):
  Pilot study on mass spectrometry–based analysis of the proteome of CD34⁺CD123⁺ progenitor cells for the identification of potential targets for immunotherapy in acute myeloid leukemia
  Proteomes 6 (1), art. 11
  full text (doi)

2017 (1)

• Schubert, K., Olde Damink, S.W.M., von Bergen, M., Schaap, F.G. (2017):
  Interactions between bile salts, gut microbiota, and hepatic innate immunity
  Immunol. Rev. 279 (1), 23 - 35
  full text (doi)