Publications
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Occupancy models reveal potential of conservation prioritization for Central American jaguars
Anim. Conserv.
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Chronic and acute effects of imidacloprid on a simulated BEEHAVE honeybee colony
Environ. Toxicol. Chem.
Volltext (DOI)Artikel in ISI-gelisteten Zeitschriften (207)
Visualization of causation in social-ecological systems
Ecol. Soc. 27 (1), art. 31
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Forecasting effects of transport infrastructure on endangered tigers: a tool for conservation planning
PeerJ 10 , e13472
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The hitchhiker's guide to generic ecological-economic modelling of land-use-based biodiversity conservation policies
Ecol. Model. 465 , art. 109861
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Energy-mediated responses to changing prey size and distribution in marine top predator movements and population dynamics
J. Anim. Ecol. 91 (1), 241 - 254
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Large-scale PVA modelling of insects in cultivated grasslands: The role of dispersal in mitigating the effects of management schedules under climate change
Ecol. Evol. 12 (7), e9063
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Stabilizing microbial communities by looped mass transfer
Proc. Natl. Acad. Sci. U.S.A. 119 (17), e2117814119
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MASTIFF: A mechanistic model for cross-scale analyses of the functioning of multiple stressed riverine ecosystems
Ecol. Model. 470 , art. 110007
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Fluctuations in density-dependent selection drive the evolution of a pace-of-life-syndrome within and between populations
Am. Nat. 199 (4), E124 - E139
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A review of key features and their implementation in unstructured, structured, and agent‐based population models for ecological risk assessment
Integr. Environ. Assess. Manag. 17 (3), 521 - 540
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Challenges, tasks, and opportunities in modeling agent-based complex systems
Ecol. Model. 457 , art. 109685
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Keeping modelling notebooks with TRACE: Good for you and good for environmental research and management support
Environ. Modell. Softw. 136 , art. 104932
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While shoot herbivores reduce, root herbivores increase nutrient enrichment’s impact on diversity in a grassland model
Ecology 102 (5), e03333
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Movement and seasonal energetics mediate vulnerability to disturbance in marine mammal populations
Am. Nat. 197 (3), 296 - 311
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Honey bee colony performance affected by crop diversity and farmland structure: a modeling framework
Ecol. Appl. 31 (1), e02216
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Socio-technical scales in socio-environmental modeling: managing a system-of-systems modeling approach
Environ. Modell. Softw. 135 , art. 104885
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High-resolution PVA along large environmental gradients to model the combined effects of climate change and land use timing: lessons from the large marsh grasshopper
Ecol. Model. 440 , art. 109355
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Collecting eco-evolutionary data in the dark: Impediments to subterranean research and how to overcome them
Ecol. Evol. 11 (11), 5911 - 5926
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Editorial: Meeting grand challenges in agent-based models
JASSS 23 (1), art. 13
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Intertwined effects of defaunation, increased tree mortality, and density compensation on seed dispersal
Ecography 43 (9), 1352 - 1363
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The ODD protocol: An update with guidance to support wider and more consistent use
Ecol. Model. 428 , art. 109105
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Three questions to ask before using model outputs for decision support
Nat. Commun. 11 , art. 4959
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The ODD protocol for describing agent-based and other simulation models: A second update to improve clarity, replication, and structural realism
JASSS 23 (2), art. 7
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Editorial: thematic series “Integrating movement ecology with biodiversity research”
Mov. Ecol. 8 , art. 19
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Mitigating bioenergy-driven biodiversity decline: A modelling approach with the European brown hare
Ecol. Model. 416 , art. 108914
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'One size does not fit all': A roadmap of purpose-driven mixed-method pathways for sensitivity analysis of agent-based models
JASSS 23 (1), art. 6
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Intraspecific trait variation in personality‐related movement behavior promotes coexistence
Oikos 129 (10), 1441 - 1454
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Moving infections: individual movement decisions drive disease persistence in spatially structured landscapes
Oikos 129 (5), 651 - 667
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Movement‐mediated community assembly and coexistence
Biol. Rev. 95 (4), 1073 - 1096
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Parameter estimation for functional-structural plant models when data are scarce: using multiple patterns for rejecting unsuitable parameter sets
Ann. Bot. 126 (4), 559 - 570
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Resilience trinity: safeguarding ecosystem functioning and services across three different time horizons and decision contexts
Oikos 129 (4), 445 - 456
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Delayed chemical defense: timely expulsion of herbivores can reduce competition with neighboring plants
Am. Nat. 193 (1), 125 - 139
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Effects of human‐induced prey depletion on large carnivores in protected areas: Lessons from modeling tiger populations in stylized spatial scenarios
Ecol. Evol. 9 (19), 11298 - 11313
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Intraspecific trait variation increases species diversity in a trait‐based grassland model
Oikos 128 (3), 441 - 455
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Modeling the emergence of migratory corridors and foraging hot spots of the green sea turtle
Ecol. Evol. 9 (18), 10317 - 10342
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Different modelling purposes
JASSS 22 (3), art. 6
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Exploring resilience with agent-based models: State of the art, knowledge gaps and recommendations for coping with multidimensionality
Ecol. Complex. 40, Part B , art. 100718
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A plea for consistency, transparency and reproducibility in risk assessment effect models
Environ. Toxicol. Chem. 38 (1), 9 - 11
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Give chance a chance: from coexistence to coviability in biodiversity theory
Ecosphere 10 (5), e02700
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Does animal personality affect movement in habitat corridors? Experiments with common voles (Microtus arvalis) using different corridor widths
Animals 9 (6), art. 291
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Agricultural landscape generators for simulation models: A review of existing solutions and an outline of future directions
Ecol. Model. 393 , 135 - 151
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Neutral mechanisms and niche differentiation in steady-state insular microbial communities revealed by single cell analysis
Environ. Microbiol. 21 (1), 164 - 181
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From cases to general principles: A call for theory development through agent-based modeling
Ecol. Model. 393 , 153 - 156
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The dimensionality of stability depends on disturbance type
Ecol. Lett. 22 (4), 674 - 684
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Transferability of mechanistic ecological models is about emergence
Trends Ecol. Evol. 34 (6), 487 - 488
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The distribution of mycotoxins in a heterogeneous wheat field in relation to microclimate, fungal and bacterial abundance
J. Appl. Microbiol. 126 (1), 177 - 190
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Cross-disciplinary links in environmental systems science: Current state and claimed needs identified in a meta-review of process models
Sci. Total Environ. 622-623 , 945 - 973
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Eco-evolutionary responses to recreational fishing under different harvest regulations
Ecol. Evol. 8 (19), 9600 - 9613
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Assisting seed dispersers to restore oldfields: An individual-based model of the interactions among badgers, foxes and Iberian pear trees
J. Appl. Ecol. 55 (2), 600 - 611
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When things don’t add up: quantifying impacts of multiple stressors from individual metabolism to ecosystem processing
Ecol. Lett. 21 (4), 568 - 577
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Bridging scales: allometric random walks link movement and biodiversity research
Trends Ecol. Evol. 33 (9), 701 - 712
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Modelling movements of Saimaa ringed seals using an individual-based approach
Ecol. Model. 368 , 321 - 335
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Predicting the impacts of anthropogenic disturbances on marine populations
Conserv. Lett. 11 (5), e12563
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Response to Kabisch and colleagues
Bioscience 68 (3), 167 - 168
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Alternaria and Fusarium fungi: differences in distribution and spore deposition in a topographically heterogeneous wheat field
J. Fungi 4 (2), art. 63
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Community consequences of foraging under fear
Ecol. Model. 383 , 80 - 90
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Pattern-oriented modelling as a novel way to verify and validate functional–structural plant models: a demonstration with the annual growth module of avocado
Ann. Bot. 121 (5), 941 - 959
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Impaired ecosystem process despite little effects on populations: modeling combined effects of warming and toxicants
Glob. Change Biol. 23 (8), 2973 - 2989
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Next-generation individual-based models integrate biodiversity and ecosystems: yes we can, and yes we must
Ecosystems 20 (2), 229 - 236
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Predictive systems models can help elucidate bee declines driven by multiple combined stressors
Apidologie 48 (3), 328 - 339
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A modelling approach to evaluating the effectiveness of Ecological Focus Areas: The case of the European brown hare
Land Use Pol. 61 , 63 - 79
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The winter pack-ice zone provides a sheltered but food-poor habitat for larval Antarctic krill
Nat. Ecol. Evol. 1 (12), 1853 - 1861
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Improving execution speed of models implemented in NetLogo
JASSS 20 (1), art. 3
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When, where, and how nature matters for ecosystem services: challenges for the next generation of ecosystem service models
Bioscience 67 (9), 820 - 833
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Agent-based modelling of social-ecological systems: achievements, challenges, and a way forward
JASSS 20 (2), art. 8
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InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change
Ecol. Model. 326 , 36 - 53
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BEESCOUT: A model of bee scouting behaviour and a software tool for characterizing nectar/pollen landscapes for BEEHAVE
Ecol. Model. 340 , 126 - 133
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Reintroducing environmental change drivers in biodiversity–ecosystem functioning research
Trends Ecol. Evol. 31 (12), 905 - 915
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Robustness analysis: Deconstructing computational models for ecological theory and applications
Ecol. Model. 326 , 162 - 167
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Next-generation ecological modelling: A special issue dedicated to Donald DeAngelis on the occasion of his 70th birthday. Editorial
Ecol. Model. 326 , 1 - 3
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Structural realism, emergence, and predictions in next-generation ecological modelling: Synthesis from a special issue
Ecol. Model. 326 , 177 - 187
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How to use mechanistic effect models in environmental risk assessment of pesticides: Case studies and recommendations from the SETAC workshop MODELINK
Integr. Environ. Assess. Manag. 12 (1), 21 - 31
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Multiple stressors: using the honeybee model BEEHAVE to explore how spatial and temporal forage stress affects colony resilience
Oikos 125 (7), 1001 - 1016
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Monodominance in tropical forests: modelling reveals emerging clusters and phase transitions
J. R. Soc. Interface 13 (117), art. 0123
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Asymmetric facilitation can reduce size inequality in plant populations resulting in delayed density-dependent mortality
Oikos 125 (8), 1153 - 1161
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Scale-dependent role of demography and dispersal on the distribution of populations in heterogeneous landscapes
Oikos 125 (5), 667 - 673
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Modeling population-level consequences of polychlorinated biphenyl exposure in East Greenland polar bears
Arch. Environ. Contam. Toxicol 70 (1), 143 - 154
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Allee effect in polar bears: a potential consequence of polychlorinated biphenyl contamination
Proc. R. Soc. B-Biol. Sci. 283 (1843), art. 20161883
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Biodiversity and ecosystem functioning decoupled: invariant ecosystem functioning despite non-random reductions in consumer diversity
Oikos 125 (3), 424 - 433
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Simple or complex: Relative impact of data availability and model purpose on the choice of model types for population viability analyses
Ecol. Model. 323 , 87 - 95
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Merging trait-based and individual-based modelling: An animal functional type approach to explore the responses of birds to climatic and land use changes in semi-arid African savannas
Ecol. Model. 326 , 75 - 89
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Modeling tiger population and territory dynamics using an agent-based approach
Ecol. Model. 312 , 347 - 362
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How biological clocks and changing environmental conditions determine local population growth and species distribution in Antarctic krill (Euphausia superba): a conceptual model
Ecol. Model. 303 , 78 - 86
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Making predictions in a changing world: the benefits of individual-based ecology
Bioscience 65 (2), 140 - 150
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Modelling harvesting strategies for the lobster fishery in northern Europe: the importance of protecting egg-bearing females
Popul. Ecol. 57 (1), 237 - 251
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Replicating and breaking models: good for you and good for ecology
Oikos 124 (6), 691 - 696
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Per aspera ad astra: through complex population modeling to predictive theory
Am. Nat. 186 (5), 669 - 674
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Local density effects on individual production are dynamic: insights from natural stands of a perennial savanna grass
Oecologia 178 (4), 1125 - 1135
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Merging validation and evaluation of ecological models to 'evaludation': a review of terminology and a practical approach
Ecol. Model. 280 , 117 - 128
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BEEHAVE: a systems model of honeybee colony dynamics and foraging to explore multifactorial causes of colony failure
J. Appl. Ecol. 51 (2), 470 - 482
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Bird sky networks: How do avian scavengers use social information to find carrion?
Ecology 95 (7), 1799 - 1808
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Data availability and model complexity, generality, and utility: a reply to Lonergan
Trends Ecol. Evol. 29 (6), 302 - 303
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Coupling different mechanistic effect models for capturing individual- and population-level effects of chemicals: Lessons from a case where standard risk assessment failed
Ecol. Model. 280 , 18 - 29
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Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE
Ecol. Model. 280 , 129 - 139
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Population models for ecological risk assessment of chemicals: Short introduction and summary of a special issue. Editorial
Ecol. Model. 280 , 1 - 4
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Pattern-oriented parameterization of general models for ecological application: towards realistic evaluations of management approaches
Ecol. Model. 275 , 78 - 88
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The role of belowground competition and plastic biomass allocation in altering plant mass–density relationships
Oikos 123 (2), 248 - 256
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Limitations of extrapolating toxic effects on reproduction to the population level
Ecol. Appl. 24 (8), 1972 - 1983
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The evolutionary consequences of disrupted male mating signals: an agent-based modelling exploration of endocrine disrupting chemicals in the guppy
PLOS One 9 (7), e103100
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Two pairs of eyes are better than one: Combining individual-based and matrix models for ecological risk assessment of chemicals
Ecol. Model. 280 , 40 - 52
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Field metabolic rate and PCB adipose tissue deposition efficiency in East Greenland polar bears derived from contaminant monitoring data
PLOS One 9 (8), e104037
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Appropriate resolution in time and model structure for population viability analysis: insights from a butterfly metapopulation
Biol. Conserv. 169 , 345 - 354
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Facilitating parameter estimation and sensitivity analysis of agent-based models: a cookbook using NetLogo and R
JASSS 17 (3), art. 11
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Modeling implications of food resource aggregation on animal migration phenology
Ecol. Evol. 3 (8), 2535 - 2546
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Towards a systems approach for understanding honeybee decline: a stocktaking and synthesis of existing models
J. Appl. Ecol. 50 (4), 868 - 880
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Predictive systems ecology
Proc. R. Soc. B-Biol. Sci. 280 (1771), art. 20131452
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Do simple models lead to generality in ecology?
Trends Ecol. Evol. 28 (10), 578 - 583
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Ranking landscape development scenarios affecting natterjack toad (Bufo calamita) population dynamics in central Poland
PLOS One 8 (5), e64852
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Chemical and natural stressors combined: from cryptic effects to population extinction
Sci. Rep. 3 , art. 2036
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Mechanistic effect modeling for ecological risk assessment: Where to go from here?
Integr. Environ. Assess. Manag. 9 (3), e58 - e63
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How can we bring together empiricists and modellers in functional biodiversity research?
Basic Appl. Ecol. 14 (2), 93 - 101
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Mighty small: observing and modeling individual microbes becomes big science
Proc. Natl. Acad. Sci. U.S.A. 110 (45), 18027 - 18028
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Plant interactions alter the predictions of metabolic scaling theory
PLOS One 8 (2), e57612
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Linking pesticide exposure and spatial dynamics: an individual-based model of wood mouse (Apodemus sylvaticus) populations in agricultural landscapes
Ecol. Model. 248 , 92 - 102
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Predicting population dynamics from the properties of individuals: a cross-level test of dynamic energy budget theory
Am. Nat. 181 (4), 506 - 519
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Extrapolating ecotoxicological effects from individuals to populations: a generic approach based on Dynamic Energy Budget theory and individual-based modeling
Ecotoxicology 22 (3), 574 - 583
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Population-level consequences of spatially heterogeneous exposure to heavy metals in soil: an individual-based model of springtails
Ecol. Model. 250 , 338 - 351
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Behind the scenes of population viability modeling: predicting butterfly metapopulation dynamics under climate change
Ecol. Model. 259 , 62 - 73
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Representing the acquisition and use of energy by individuals in agent-based models of animal populations
Methods Ecol. Evol. 4 (2), 151 - 161
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Pattern-oriented modelling: a ‘multi-scope’ for predictive systems ecology
Philos. Trans. R. Soc. B-Biol. Sci. 367 (1586), 298 - 310
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Correlative and dynamic species distribution modelling for ecological predictions in the Antarctic: a cross-disciplinary concept
Polar Res. 31 , 11091
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Differences between symmetric and asymmetric facilitation matter: exploring the interplay between modes of positive and negative plant interactions
J. Ecol. 100 (6), 1482 - 1491
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Dynamic Energy Budget theory meets individual-based modelling: a generic and accessible implementation
Methods Ecol. Evol. 3 (2), 445 - 449
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Agent-based modelling: tools for linking NetLogo and R
JASSS 15 (3), art. 8
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RNetLogo: an R package for running and exploring individual-based models implemented in NetLogo
Methods Ecol. Evol. 3 (3), 480 - 483
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Post-hoc pattern-oriented testing and tuning of an existing large model: lessons from the field vole
PLoS One 7 (9), e45872
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Uncertainty in predictions of range dynamics: black grouse climbing the Swiss Alps
Ecography 35 (7), 590 - 603
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Neutral communities may lead to decreasing diversity-disturbance relationships: insights from a generic simulation model
Ecol. Lett. 14 (7), 653 - 660
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Adding value to ecological risk assessment with population modeling
Hum. Ecol. Risk Assess. 17 (2), 287 - 299
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Predicting the threats of chemicals to wildlife: what are the challenges?
Integr. Environ. Assess. Manag. 7 (3), 499 - 501
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Integrating individual search and navigation behaviors in mechanistic movement models
Theor. Ecol. 4 (3), 341 - 355
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Understanding shifts in wildfire regimes as emergent threshold phenomena
Am. Nat. 178 (6), E149 - E161
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The independent and interactive effects of tree-tree establishment competition and fire on savanna structure and dynamics
Am. Nat. 175 (3), E44 - E65
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Interacting effects of habitat destruction and changing disturbance rates on biodiversity: Who is going to survive?
Ecol. Model. 221 (23), 2776 - 2783
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Integrating population modeling into ecological risk assessment
Integr. Environ. Assess. Manag. 6 (1), 191 - 193
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The ODD protocol: A review and first update
Ecol. Model. 221 (23), 2760 - 2768
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Modelling dead wood islands in European beech forests: how much and how reliably would they provide dead wood?
Eur. J. For. Res. 129 (4), 659 - 668
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The one-sidedness and cultural bias of the resilience approach
GAIA 19 (1), 25 - 32
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Ecological models and pesticide risk assessment: current modeling practice
Environ. Toxicol. Chem. 29 (4), 1006 - 1012
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Ecological models supporting environmental decision making: a strategy for the future
Trends Ecol. Evol. 25 (8), 479 - 486
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NetLogo meets R: linking agent-based models with a toolbox for their analysis
Environ. Modell. Softw. 25 (8), 972 - 974
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Population models in pesticide risk assessment: lessons for assessing population-level effects, recovery, and alternative exposure scenarios from modeling a small mammal
Environ. Toxicol. Chem. 29 (6), 1292 - 1300
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Grass mortality in semi-arid savanna: the role of fire, competition and self-shading
Perspect. Plant Ecol. Evol. Syst. 12 (1), 1 - 8
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Wildfire, landscape diversity and the Drossel-Schwabl model
Ecol. Model. 221 (1), 98 - 105
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The virtual ecologist approach: simulating data and observers
Oikos 119 (4), 622 - 635
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Ecological models in support of regulatory risk assessment of pesticides: developing a strategy for the future
Integr. Environ. Assess. Manag. 5 (1), 167 - 172
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Book review: "S.P. Otto and T. Day, A Biologist's Guide to Mathematical Modeling in Ecology and Evolution , Princeton University Press, Princeton (2007) 732pp., Price: £39.95, ISBN: 978-0-691-12344-8"
Basic Appl. Ecol. 10 (3), 289 - 289
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CREAM: a European project on mechanistic effect models for ecological risk assessment of chemicals
Environ. Sci. Pollut. Res. 16 (6), 614 - 617
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Model the real, artificial, or stylized Iguana? Artificial life and adaptive behavior can be linked through pattern-oriented modeling
Adapt. Behav. 17 (4), 309 - 312
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Dogs on the catwalk: modelling re-introduction and translocation of endangered wild dogs in South Africa
Biol. Conserv. 142 (11), 2774 - 2781
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Individual variations in infectiousness explain long-term disease persistence in wildlife populations
Oikos 118 (2), 199 - 208
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Reversed effects of grazing on plant diversity: the role of below-ground competition and size symmetry
Oikos 118 (12), 1830 - 1843
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Proposing an information criterion for individual-based models developed in a pattern-oriented modelling framework
Ecol. Model. 220 (17), 1957 - 1967
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Mechanistic effect models for ecological risk assessment of chemicals (MEMoRisk)-a new SETAC-Europe Advisory Group
Environ. Sci. Pollut. Res. 16 (3), 250 - 252
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Situation-based surveillance: adapting investigations to actual epidemic situations
J. Wildl. Dis. 45 (4), 1089 - 1103
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Unifying wildfire models from ecology and statistical physics
Am. Nat. 174 (5), E170 - E185
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Clumped versus scattered: how does the spatial correlation of disturbance events affect biodiversity?
Theor. Ecol. 1 (4), 231 - 240
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Competition among plants: concepts, individual-based modelling approaches, and a proposal for a future research strategy
Perspect. Plant Ecol. Evol. Syst. 9 (3-4), 121 - 135
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Ecosystem oceanography for global change in fisheries
Trends Ecol. Evol. 23 (6), 338 - 346
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Breeding synchrony in colonial birds: from local stress to global harmony
Proc. R. Soc. B-Biol. Sci. 275 (1642), 1557 - 1563
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Using the ODD protocol for describing three agent-based social simulation models of land-use change
JASSS 11 (2), art. 3
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Recruitment filters in a perennial grassland: the interactive roles of fire, competitors, moisture and seed availability
J. Ecol. 96 (5), 1033 - 1044
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Differences and similarities between ecological and economic models for biodiversity conservation
Ecol. Econ. 62 (2), 232 - 241
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What you see is where you go? Modeling dispersal in mountainous landscapes
Landsc. Ecol. 22 (6), 853 - 866
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Patterns for parameters in simulation models
Ecol. Model. 204 (3-4), 553 - 556
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Simulating cryptic movements of a mangrove crab: recovery phenomena after small scale fishery
Ecol. Model. 205 (1-2), 110 - 122
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Pattern-oriented modelling for estimating unknown pre-breeding survival rates: the case of the Lesser Spotted Woodpecker (Picoides minor)
Biol. Conserv. 135 (4), 555 - 564
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Home range dynamics and population regulation: an individual-based model of the common shrew Sorex araneus
Ecol. Model. 205 (3-4), 397 - 409
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Modelling secondary succession of neotropical mangroves: causes and consequences of growth reduction in pioneer species
Perspect. Plant Ecol. Evol. Syst. 7 (4), 243 - 252
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A standard protocol for describing individual-based and agent-based models
Ecol. Model. 198 (1-2), 115 - 126
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How to detect and visualize extinction thresholds for structured PVA models
Ecol. Model. 191 (3-4), 545 - 550
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Diversity and disturbances in the Antarctic megabenthos: feasible versus theoretical disturbance ranges
Ecosystems 9 (7), 1145 - 1155
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Behavioural flexibility in the mating system buffers population extinction: lessons from the lesser spotted woodpecker Picoides minor
J. Anim. Ecol. 75 (2), 540 - 548
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Ecological-economic modeling for biodiversity management: potential, pitfalls, and prospects
Conserv. Biol. 20 (4), 1034 - 1041
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Pattern-oriented modeling of agent-based complex systems: lessons from ecology
Science 310 (5750), 987 - 991
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Importance of buffer mechanisms for population viability analysis
Conserv. Biol. 19 (2), 578 - 580
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Predation effects on the evolution of life-history traits in a clonal oligochaete
Am. Nat. 166 (3), 409 - 417
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Population dynamics of a polychaete during three El Niño events: disentangling biotic and abiotic factors
Oikos 111 (2), 253 - 258
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Mitigation of climate change impacts on raptors by behavioural adaptation: ecological buffering mechanisms
Glob. Planet. Change 47 (2-4), 273 - 281
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Asymmetric competition as a natural outcome of neighbour interactions among plants: results from the field-of-neighbourhood modelling approach
Plant Ecol. 170 (1), 135 - 145
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Age-related decline in forest production: modelling the effects of growth limitation, neighbourhood competition and self-thinning
J. Ecol. 92 (5), 846 - 853
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META-X : generic software for metapopulation viability analysis
Biodivers. Conserv. 13 (1), 165 - 188
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The intrinsic mean time to extinction: a unifying approach to analysing persistence and viability of populations
Oikos 105 (3), 501 - 511
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Ten years of individual-based modelling in ecology: what have we learned and what could we learn in the future?
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Individual-based modelling and ecological theory: synthesis of a workshop
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