Tesfaye Wubet, Ph.D.

Contact / Address


Tesfaye Wubet, Ph.D.
Senior Scientist

Department of Soil Ecology
Helmholtz Centre for Environmental Research - UFZ
Theodor-Lieser-Strasse 4 | D-06120 Halle/Saale
Germany

Tel.:
Fax:
Email:

+49 345 558 5204
+49 345 558 5449
tesfaye.wubet@ufz.de

Tesfaye Wubet

Research Interest

My scientific research focused on unravelling the mechanisms of plant-microbe interactions with a particular emphasis on the effect of drivers of global change such as land use intensity, climate change, as well as plant species identity and genetic diversity on the plant associated and rhizosphere soil microbiomes. My group employs multiple meta-barcoding approaches using different next generation sequencing platforms to assess microbial diversity coupled with the use of comparative metagenomics and metatranscriptomics in the frame of interdisciplinary and integrated research projects to link structural and functional diversity, and disentangle below ground inter- and intra-kingdom microbial interaction networks and processes in different soil microbial hotspots.


Current position

since 2010

Senior scientist

Head of Environmental Genomics and Next Generation Sequencing group

Curriculum Vitae

2007-2009

Postdoctoral research associate - Department of Soil Ecology, UFZ, Halle (Saale), Germany. Research topic: Construct soil metagenomic libraries from forest and grassland soils along land use gradients and screen for fungal functional genes. Including supervision of PhD students. Project: Biodiversity Exploratories http://www.biodiversity-exploratories.de

2004-2007

Postdoc - Department of Systematic Botany and Mycology, University of Tuebingen, Germany. Supervisors: Prof. Dr. Franz Oberwinkler and Prof. Dr. Ingrid Kottke. Research Topic: Molecular diversity and community structure of arbuscular mycorrhizal fungi associated with indigenous tree species in a mountain forest in Ethiopia.

2000-2004

Ph.D. in Botany (Mycology, Molecular Biology), Department of Systematic Botany and Mycology, University of Tuebingen, Germany. (Supervisors: Prof. Dr. Ingrid Kottke and Prof. Dr. Franz Oberwinkler).

1994-1997

Master of Science (M.Sc.) in Biology (Microbiology), Addis Ababa University, Addis Ababa, Ethiopia.

1988-1992

Bachelor of Science (B.Sc.) in Biology, Addis Ababa University, Addis Ababa, Ethiopia.


 Current projects and group members:

  • Currently my team is composed of 1 postdoc, 3 PhD students, and three lab technicians
  • The NGS lab is equipped with Illumina MiSeq and associated lab and bioinformatic facilities

Inhalt:

2017 (13)
2016 (14)
2015 (8)
2014 (8)
2013 (11)
2012 (5)

Weiterführende Recherchen können Sie in unserem Publikationsverzeichnis durchführen.

2017 (13)

  • Ammer, C., Schall, P., Goßner, M.M., Heinrichs, S., Boch, S., Prati, D., Jung, K., Baumgartner, V., Blaser, S., Böhm, S., Buscot, F., Daniel, R., Goldmann, K., Kaiser, K., Kahl, T., Lange, M., Müller, J., Overmann, J., Renner, S., Schulze E.-D., , Sikorski, J., Tschapka, M., Türke, M., Weisser, W., Wemheuer, B., Wubet, T., Fischer, M., (2017):
    Waldbewirtschaftung und Biodiversität: Vielfalt ist gefragt
    AFZ - Der Wald 72 (17), 20 - 25
  • Chen, L., Zheng, Y., Gao, C., Mi, X.-C., Ma, K.-P., Wubet, T., Guo, L.-D., (2017):
    Phylogenetic relatedness explains highly interconnected and nested symbiotic networks of woody plants and arbuscular mycorrhizal fungi in a Chinese subtropical forest
    Mol. Ecol. 26 (9), 2563 - 2575
    Volltext (URL)
  • Delelegn, Y.T., Purahong, W., Blazevic, A., Yitaferu, B., Wubet, T., Göransson, H., Godbold, D.L., (2017):
    Changes in land use alter soil quality and aggregate stability in the highlands of northern Ethiopia
    Sci. Rep. 7 , art. 13602
    Volltext (URL)
  • Lazar, C.S., Stoll, W., Lehmann, R., Herrmann, M., Schwab, V.F., Akob, D.M., Nawaz, A., Wubet, T., Buscot, F., Totsche, K.-U., Küsel, K., (2017):
    Archaeal diversity and CO2 fixers in carbonate-/siliciclastic-rock groundwater ecosystems
    Archaea 2017 , art. 2136287
    Volltext (URL)
  • Morawe, M., Hoeke, H., Wissenbach, D.K., Lentendu, G., Wubet, T., Kröber, E., Kolb, S., (2017):
    Acidotolerant Bacteria and fungi as a sink of methanol-derived carbon in a deciduous forest soil
    Front. Microbiol. 8 , 1361
    Volltext (URL)
  • Purahong, W., Pietsch, K.A., Lentendu, G., Schöps, R., Bruelheide, H., Wirth, C., Buscot, F., Wubet, T., (2017):
    Characterization of unexplored deadwood mycobiome in highly diverse subtropical forests using culture-independent molecular technique
    Front. Microbiol. 8 , art. 574
    Volltext (URL)
  • Purahong, W., Wubet, T., Krüger, D., Buscot, F., (2017):
    Molecular evidence strongly supports deadwood-inhabiting fungi exhibiting unexpected tree species preferences in temperate forests
    ISME J.
    Volltext (URL)
  • Scholten, T., Goebes, P., Kühn, P., Seitz, S., Assmann, T., Bauhus, J., Bruelheide, H., Buscot, F., Erfmeier, A., Fischer, M., Härdtle, W., He, J.-S., Ma, K., Niklaus, P.A., Scherer-Lorenzen, M., Schmid, B., Shi, X., Song, Z., von Oheimb, G., Wirth, C., Wubet, T., Schmidt, K., (2017):
    On the combined effect of soil fertility and topography on tree growth in subtropical forest ecosystems—a study from SE China
    J. Plant Ecol. 10 (1), 111 - 127
    Volltext (URL)
  • Schuldt, A., Bruelheide, H., Buscot, F., Assmann, T., Erfmeier, A., Klein, A.-M., Ma, K., Scholten, T., Staab, M., Wirth, C., Zhang, J., Wubet, T., (2017):
    Belowground top-down and aboveground bottom-up effects structure multitrophic community relationships in a biodiverse forest
    Sci. Rep. 7 , art. 4222
    Volltext (URL)
  • Shang, Y., Sikorski, J., Bonkowski, M., Fiore-Donno, A.-M., Kandeler, E., Marhan, S., Boeddinghaus, R.S., Solly, E.F., Schrumpf, M., Schöning, I., Wubet, T., Buscot, F., Overmann, J., (2017):
    Inferring interactions in complex microbial communities from nucleotide sequence data and environmental parameters
    PLOS One 12 (3), e0173765
    Volltext (URL)
  • Simons, N.K., Lewinsohn, T., Blüthgen, N., Buscot, F., Boch, S., Daniel, R., Gossner, M.M., Jung, K., Kaiser, K., Müller, J., Prati, D., Renner, S.C., Socher, S.A., Sonnemann, I., Weiner, C.N., Werner, M., Wubet, T., Wurst, S., Weisser, W.W., (2017):
    Contrasting effects of grassland management modes on species-abundance distributions of multiple groups
    Agric. Ecosyst. Environ. 237 , 143 - 153
    Volltext (URL)
  • Trogisch, S., Schuldt, A., Bauhaus, J., Blum, J.A., Both, S., Buscot, F., Castro-Izaguirre, N., Chesters, D., Durka, W., Eichenberg, D., Erfmeier, A., Fischer, M., Geißler, C., Germany, M.S., Goebes, P., Gutknecht, J., Hahn, C.Z., Haider, S., Haerdtle, W., He, J.-S., Hector, A., Hönig, L., Huang, Y., Klein, A.-M., Kühn, P., Kunz, M., Leppert, K., Li, Y., Liu, X., Niklaus, P.A., Pei, Z., Pietsch, K.A., Prinz, R., Proß, T., Scherer-Lorenzen, M., Schmidt, K., Scholten, T., Seitz, S., Song, Z., Staab, M., von Oheimb, G., Weißbecker, C., Welk, E., Wirth, C., Wubet, T., Yang, B., Yang, X., Zhu, C.-D., Schmid, B., Ma, K., Bruelheide, H., (2017):
    Towards a methodical framework for comprehensively assessing forest multifunctionality
    Ecol. Evol.
    Volltext (URL)
  • Weißbecker, C., Buscot, F., Wubet, T., (2017):
    Preservation of nucleic acids by freeze-drying for next generation sequencing analyses of soil microbial communities
    J. Plant Ecol. 10 (1), 81 - 90
    Volltext (URL)
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2016 (14)

  • Fiore-Donno, A.M., Weinert, J., Wubet, T., Bonkowski, M., (2016):
    Metacommunity analysis of amoeboid protists in grassland soils
    Sci. Rep. 6 , art. 19068
    Volltext (URL)
  • Francioli, D., Schulz, E., Lentendu, G., Wubet, T., Buscot, F., Reitz, T., (2016):
    Mineral vs. organic amendments: microbial community structure, activity and abundance of agriculturally relevant microbes are driven by long-term fertilization strategies
    Front. Microbiol. 7 , art. 1446
    Volltext (URL)
  • Goldmann, K., Schröter, K., Pena, R., Schöning, I., Schrumpf, M., Buscot, F., Polle, A., Wubet, T., (2016):
    Divergent habitat filtering of root and soil fungal communities in temperate beech forests
    Sci. Rep. 6 , art. 31439
    Volltext (URL)
  • Gossner, M.M., Lewinsohn, T.M., Kahl, T., Grassein, F., Boch, S., Prati, D., Birkhofer, K., Renner, S.C., Sikorski, J., Wubet, T., Arndt, H., Baumgartner, V., Blaser, S., Blüthgen, N., Börschig, C., Buscot, F., Diekötter, T., Jorge, L.R., Jung, K., Keyel, A.C., Klein, A.-M., Klemmer, S., Krauss, J., Lange, M., Müller, J., Overmann, J., Pašalić, E., Penone, C., Perović, D.J., Purschke, O., Schall, P., Socher, S.A., Sonnemann, I., Tschapka, M., Tscharntke, T., Türke, M., Venter, P.C., Weiner, C.N., Werner, M., Wolters, V., Wurst, S., Westphal, C., Fischer, M., Weisser, W.W., Allan, E., (2016):
    Land-use intensification causes multitrophic homogenization of grassland communities
    Nature 540 (7632), 266 - 269
    Volltext (URL)
  • Hoppe, B., Purahong, W., Wubet, T., Kahl, T., Bauhus, J., Arnstadt, T., Hofrichter, M., Buscot, F., Krüger, D., (2016):
    Linking molecular deadwood-inhabiting fungal diversity and community dynamics to ecosystem functions and processes in Central European forests
    Fungal Divers. 77 (1), 367 - 379
    Volltext (URL)
  • Kramer, S., Dibbern, D., Moll, J., Huenninghaus, M., Koller, R., Krueger, D., Marhan, S., Urich, T., Wubet, T., Bonkowski, M., Buscot, F., Lueders, T., Kandeler, E., (2016):
    Resource partitioning between bacteria, fungi, and protists in the detritusphere of an agricultural soil
    Front. Microbiol. 7 , art. 1524
    Volltext (URL)
  • Moll, J., Hoppe, B., König, S., Wubet, T., Buscot, F., Krüger, D., (2016):
    Spatial distribution of fungal communities in an arable soil
    PLOS One 11 (2), e0148130
    Volltext (URL)
  • Nacke, H., Goldmann, K., Schöning, I., Pfeiffer, B., Kaiser, K., Castillo-Villamizar, G.A., Schrumpf, M., Buscot, F., Daniel, R., Wubet, T., (2016):
    Fine spatial scale variation of soil microbial communities under European beech and Norway spruce
    Front. Microbiol. 7 , art. 2067
    Volltext (URL)
  • Nawaz, A., Purahong, W., Lehmann, R., Herrmann, M., Küsel, K., Totsche, K.U., Buscot, F., Wubet, T., (2016):
    Superimposed pristine limestone aquifers with marked hydrochemical differences exhibit distinct fungal communities
    Front. Microbiol. 7 , art. 666
    Volltext (URL)
  • Purahong, W., Durka, W., Fischer, M., Dommert, S., Schöps, R., Buscot, F., Wubet, T., (2016):
    Tree species, tree genotypes and tree genotypic diversity levels affect microbe-mediated soil ecosystem functions in a subtropical forest
    Sci. Rep. 6 , art. 36672
    Volltext (URL)
  • Purahong, W., Krüger, D., Buscot, F., Wubet, T., (2016):
    Correlations between the composition of modular fungal communities and litter decomposition-associated ecosystem functions
    Fungal Ecol. 22 , 106 - 114
    Volltext (URL)
  • Purahong, W., Wubet, T., Lentendu, G., Schloter, G., Pecyna, M.J., Kapturska, D., Hofrichter, M., Krüger, D., Buscot, F., (2016):
    Life in leaf litter: novel insights into community dynamics of bacteria and fungi during litter decomposition
    Mol. Ecol. 25 (16), 4059 - 4074
    Volltext (URL)
  • Soliveres, S., Manning, P., Prati, D., Gossner, M.M., Alt, F., Arndt, H., Baumgartner, V., Binkenstein, J., Birkhofer, K., Blaser, S., Blüthgen, N., Boch, S., Böhm, S., Börschig, C., Buscot, F., Diekötter, T., Heinze, J., Hölzel, N., Jung, K., Klaus, V.H., Klein, A.-M., Kleinebecker, T., Klemmer, S., Krauss, J., Lange, M., Morris, E.K., Müller, J., Oelmann, Y., Overmann, J., Pašalić, E., Renner, S.C., Rillig, M.C., Schaefer, H.M., Schloter, M., Schmitt, B., Schöning, I., Schrumpf, M., Sikorski, J., Socher, S.A., Solly, E.F., Sonnemann, I., Sorkau, E., Steckel, J., Steffan-Dewenter, I., Stempfhuber, B., Tschapka, M., Türke, M., Venter, P., Weiner, C.N., Weisser, W.W., Werner, M., Westphal, C., Wilcke, W., Wolters, V., Wubet, T., Wurst, S., Fischer, M., Allan, E., (2016):
    Locally rare species influence grassland ecosystem multifunctionality
    Philos. Trans. R. Soc. B-Biol. Sci. 371 (1694), art. 20150269
    Volltext (URL)
  • Soliveres, S., van der Plas, F., Manning, P., Prati, D., Gossner, M.M., Renner, S.C., Alt, F., Arndt, H., Baumgartner, V., Binkenstein, J., Birkhofer, K., Blaser, S., Blüthgen, N., Boch, S., Böhm, S., Börschig, C., Buscot, F., Diekötter, T., Heinze, J., Hölzel, N., Jung, K., Klaus, V.H., Kleinebecker, T., Klemmer, S., Krauss, J., Lange, M., Morris, E.K., Müller, J., Oelmann, Y., Overmann, J., Pašalić, E., Rillig, M.C., Schaefer, H.M., Schloter, M., Schmitt, B., Schöning, I., Schrumpf, M., Sikorski, J., Socher, S.A., Solly, E.F., Sonnemann, I., Sorkau, E., Steckel, J., Steffan-Dewenter, I., Stempfhuber, B., Tschapka, M., Türke, M., Venter, P.C., Weiner, C.N., Weisser, W.W., Werner, M., Westphal, C., Wilcke, W., Wolters, V., Wubet, T., Wurst, S., Fischer, M., Allan, E., (2016):
    Biodiversity at multiple trophic levels is needed for ecosystem multifunctionality
    Nature 536 (7617), 456 - 459
    Volltext (URL)
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2015 (8)

  • Gao, C., Zhang, Y., Shi, N.-N., Zheng, Y., Chen, L., Wubet, T., Bruelheide, H., Both, S., Buscot, F., Ding, Q., Erfmeier, A., Kühn, P., Nadrowski, K., Scholten, T., Guo, L.-D., (2015):
    Community assembly of ectomycorrhizal fungi along a subtropical secondary forest succession
    New Phytol. 205 (2), 771 - 785
    Volltext (URL)
  • Goldmann, K., Schöning, I., Buscot, F., Wubet, T., (2015):
    Forest management type influences diversity and community composition of soil fungi across temperate forest ecosystems
    Front. Microbiol. 6 , art. 1300
    Volltext (URL)
  • Hoppe, B., Krüger, D., Kahl, T., Arnstadt, T., Buscot, F., Bauhus, J., Wubet, T., (2015):
    A pyrosequencing insight into sprawling bacterial diversity and community dynamics in decaying deadwood logs of Fagus sylvatica and Picea abies
    Sci. Rep. 5 , art. 9456
    Volltext (URL)
  • Ramirez, K.S., Döring, M., Eisenhauer, N., Gardi, C., Ladau, J., Leff, J.W., Lentendu, G., Lindo, Z., Rillig, M.C., Russell, D., Scheu, S., St. John, M.G., de Vries, F., Wubet, T., van der Putten, W.H., Wall, D.H., (2015):
    Toward a global platform for linking soil biodiversity data
    Front. Ecol. Evol. 3 , art. 91
    Volltext (URL)
  • Schuldt, A., Wubet, T., Buscot, F., Staab, M., Assmann, T., Böhnke-Kammerlander, M., Both, S., Erfmeier, A., Klein, A.-M., Ma, K., Pietsch, K., Schultze, S., Wirth, C., Zhang, J., Zumstein, P., Bruelheide, H., (2015):
    Multitrophic diversity in a biodiverse forest is highly nonlinear across spatial scales
    Nat. Commun. 6 , art. 10169
    Volltext (URL)
  • Stempfhuber, B., Engel, M., Fischer, D., Neskovic-Prit, G., Wubet, T., Schöning, I., Gubry-Rangin, C., Kublik, S., Schloter-Hai, B., Rattei, T., Welzl, G., Nicol, G.W., Schrumpf, M., Buscot, F., Prosser, J.I., Schloter, M., (2015):
    pH as a driver for ammonia-oxidizing archaea in forest soils
    Microb. Ecol. 69 (4), 879 - 883
    Volltext (URL)
  • Tarkka, M.T., Feldhahn, L., Buscot, F., Wubet, T., (2015):
    Genome sequence of the mycorrhiza helper bacterium Streptomyces sp. strain AcH 505
    Genome Announc. 3 (2), e01386-14
    Volltext (URL)
  • Tarkka, M.T., Feldhahn, L., Krüger, D., Arnold, N., Buscot, F., Wubet, T., (2015):
    Draft genome sequence of Streptomyces sp. Strain 150FB, a mushroom mycoparasite antagonist
    Genome Announc. 3 (2), e01441-14
    Volltext (URL)
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2014 (8)

  • Bruelheide, H., Nadrowski, K., Assmann, T., Bauhus, J., Both, S., Buscot, F., Chen, X.-Y., Ding, B.Y., Durka, W., Erfmeier, A., Gutknecht, J.L.M., Guo, D.L., Guo, L.-D., Härdtle, W., He, J.-S., Klein, A.-M., Kühn, P., Liang, Y., Liu, X.J., Michalski, S., Niklaus, P.A., Pei, K.Q., Scherer-Lorenzen, M., Scholten, T., Schuldt, A., Seidler, G., Trogisch, S., von Oheimb, G., Welk, E., Wirth, C., Wubet, T., Yang, X.F., Yu, M.J., Zhang, S.R., Zhou, H.Z., Fischer, M., Ma, K.P., Schmid, B., (2014):
    Designing forest biodiversity experiments: general considerations illustrated by a new large experiment in subtropical China
    Methods Ecol. Evol. 5 (1), 74 - 89
    Volltext (URL)
  • Gao, C., Shi, N.-N., Liu, Y.-X., Zheng, Y., Ding, Q., Mi, X.-C., Ma, K.-P., Wubet, T., Buscot, F., Guo, L.-D., (2014):
    Host plant richness explains diversity of ectomycorrhizal fungi: Response to the comment of Tedersoo et al. (2014)
    Mol. Ecol. 23 (5), 996 - 999
    Volltext (URL)
  • Goris, T., Schubert, T., Gadkari, J., Wubet, T., Tarkka, M., Buscot, F., Adrian, L., Diekert, G., (2014):
    Insights into organohalide respiration and the versatile catabolism of Sulfurospirillum multivorans gained from comparative genomics and physiological studies
    Environ. Microbiol. 16 (11), 3562 - 3580
    Volltext (URL)
  • Hoppe, B., Kahl, T., Karasch, P., Wubet, T., Bauhus, J., Buscot, F., Krüger, D., (2014):
    Network analysis reveals ecological links between N-fixing bacteria and wood-decaying fungi
    PLOS One 9 (2), e88141
    Volltext (URL)
  • Jefwa, J.M., Dames, J., Diédhiou, A.G., Qaddoury, A., Wubet, T., Bâ, A.M., (2014):
    International Workshop of the African Network on Mycorrhiza (AFRINOM 1): advancing plant–microbe interactions in crop nutrition, integration of mycorrhiza into agroecosystems
    Mycorrhiza 24 (1), 75 - 76
    Volltext (URL)
  • Lentendu, G., Wubet, T., Chatzinotas, A., Wilhelm, C., Buscot, F., Schlegel, M., (2014):
    Effects of long term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach
    Mol. Ecol. 23 (13), 3341 - 3355
    Volltext (URL)
    Daten DOI
  • Morris, E.K., Caruso, T., Buscot, F., Fischer, M., Hancock, C., Maier, T.S., Meiners, T., Müller, C., Obermaier, E., Prati, D., Socher, S.A., Sonnemann, I., Wäschke, N., Wubet, T., Wurst, S., Rillig, M.C., (2014):
    Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories
    Ecol. Evol. 4 (18), 3514 - 3524
    Volltext (URL)
  • Stempfhuber, B., Welzl, G., Wubet, T., Schöning, I., Marhan, S., Buscot, F., Kandeler, E., Schloter, M., (2014):
    Drivers for ammonia-oxidation along a land-use gradient in grassland soils
    Soil Biol. Biochem. 69 , 176 - 186
    Volltext (URL)
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2013 (11)

  • Allana, E., Bossdorf, O., Dormann, C.F., Prati, D., Gossner, M.M., Tscharntke, T., Blüthgen, N., Bellach, M., Birkhofer, K., Bocha, S., Böhm, S., Börschig, C., Chatzinotas, A., Christ, S., Daniel, R., Diekötter, T., Fischer, C., Friedl, T., Glaser, K., Hallmann, C., Hodac, L., Hölzel, N., Jung, K., Klein, A.M., Klaus, V.H., Kleinebecker, T., Krauss, J., Langed, M., Morris, E.K., Müller, J., Nacken, H., Pašalić, E., Rillig, M.C., Rothenwöhrer, C., Schall, P., Scherber, C., Schulze, W., Socher, S.A., Steckel, J., Steffan-Dewenter, I., Türke, M., Weiner, C.N., Werner, M., Westphal, C., Wolter, C., Wubet, T., Gockel, S., Gorcke, M., Hemp, A., Renner, S.C., Schöning, I., Pfeiffer, S., König-Ries, B., Buscot, F., Linsenmair, K.E., Schulze, E.-D., Weisser, W.W., Fischer, M., (2013):
    Interannual variation in land-use intensity enhances grassland multidiversity
    Proc. Natl. Acad. Sci. U.S.A. 111 (1), 308 - 313
    Volltext (URL)
  • Błaszkowski, J., Chwat, G., Kovács, G.M., Gáspár, B., Ryszka, P., Orlowska, E., Pagano, M.C., Araújo, F., Wubet, T., Buscot, F., (2013):
    Septoglomus fuscum and S. furcatum, two new species of arbuscular mycorrhizal fungi (Glomeromycota)
    Mycologia 105 (3), 670 - 680
    Volltext (URL)
  • Begerow, D., Wubet, T., (2013):
    Host specificity of fungal phyllosphere communities of tropical trees (abstr.)
    Phytopathology 103 (Suppl. 2), S2.13 - S2.14
    Volltext (URL)
  • Gao, C., Shi, N.-N., Liu, Y.-X., Peay, K.G., Zheng, Y., Ding, Q., Mi, X.-C., Ma, K.-P., Wubet, T., Buscot, F., Guo, L.-D., (2013):
    Host plant genus-level diversity is the best predictor of ectomycorrhizal fungal diversity in a Chinese subtropical forest
    Mol. Ecol. 22 (12), 3403 - 3414
    Volltext (URL)
  • Herold, N., Schöning, I., Gutknecht, J., Alt, F., Boch, S., Müller, J., Oelmann, Y., Socher, S.A., Wilcke, W., Wubet, T., Schrumpf, M., (2013):
    Soil property and management effects on grassland microbial communities across a latitudinal gradient in Germany
    Appl. Soil Ecol. 73 , 41 - 50
    Volltext (URL)
  • Kurth, F., Zeitler, K., Feldhahn, L., Neu, T.R., Weber, T., Krištůfek, V., Wubet, T., Herrmann, S., Buscot, F., Tarkka, M.T., (2013):
    Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity
    BMC Microbiol. 13 , art. 205
    Volltext (URL)
  • Milcu, A., Allan, E., Roscher, C., Jenkin, T., Meyer, S.T., Flynn, D.F.B., Bessler, H., Buscot, F., Engels, C., Gubsch, M., König, S., Lipowsky, A., Loranger, J., Renker, C., Scherber, C., Schmid, B., Thébault, E., Wubet, T., Weisser, W.W., Scheu, S., Eisenhauer, N., (2013):
    Functionally and phylogenetically diverse plant communities key to soil biota
    Ecology 94 (8), 1878 - 1885
    Volltext (URL)
  • Morris, E.K., Buscot, F., Herbst, C., Meiners, T., Obermaier, E., Wäschke, N.W., Wubet, T., Rillig, M.C., (2013):
    Land use and host neighbor identity effects on arbuscular mycorrhizal fungal community composition in focal plant rhizosphere
    Biodivers. Conserv. 22 (10), 2193 - 2205
    Volltext (URL)
  • Pöritz, M., Goris, T., Wubet, T., Tarkka, M.T., Buscot, F., Nijenhuis, I., Lechner, U., Adrian, L., (2013):
    Genome sequences of two dehalogenation specialists - Dehalococcoides mccartyi strains BTF08 and DCMB5 enriched from the highly polluted Bitterfeld region
    FEMS Microbiol. Lett. 343 (2), 101 - 104
    Volltext (URL)
  • Tarkka, M.T., Herrmann, S., Wubet, T., Feldhahn, L., Recht, S., Kurth, F., Mailänder, S., Bönn, M., Neef, M., Angay, O., Bacht, M., Graf, M., Maboreke, H., Fleischmann, F., Grams, T.E.E., Ruess, L., Schädler, M., Brandl, R., Scheu, S., Schrey, S.D., Grosse, I., Buscot, F., (2013):
    OakContigDF159.1, a reference library for studying differential gene expression in Quercus robur during controlled biotic interactions: use for quantitative transcriptomic profiling of oak roots in ectomycorrhizal symbiosis
    New Phytol. 199 (2), 529 - 540
    Volltext (URL)
  • Wu, Y.-T., Wubet, T., Trogisch, S., Both, S., Scholten, T., Bruelheide, H., Buscot, F., (2013):
    Forest age and plant species composition determine the soil fungal community composition in a Chinese subtropical forest
    PLOS One 8 (6), e66829
    Volltext (URL)
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2012 (5)

  • Birkhofer, K., Schöning, I., Alt, F., Herold, N., Klarner, B., Maraun, M., Marhan, S., Oelmann, Y., Wubet, T., Yurkov, A., Begerow, D., Berner, D., Buscot, F., Daniel, R., Diekötter, T., Ehnes, R.B., Erdmann, G., Fischer, C., Foesel, B., Groh, J., Gutknecht, J., Kandeler, E., Lang, C., Lohaus, G., Meyer, A., Nacke, H., Näther, A., Overmann, J., Polle, A., Pollierer, M.M., Scheu, S., Schloter, M., Schulze, E.-D., Schulze, W., Weinert, J., Weisser, W.W., Wolters, V., Schrumpf, M., (2012):
    General relationships between abiotic soil properties and soil biota across spatial scales and different land-use types
    PLoS One 7 (8), e43292
    Volltext (URL)
  • Krüger, D., Kapturska, D., Fischer, C., Daniel, R., Wubet, T., (2012):
    Diversity measures in environmental sequences are highly dependent on alignment quality—Data from ITS and new LSU primers targeting basidiomycetes
    PLoS One 7 (2), e32139
    Volltext (URL)
  • Taubert, M., Vogt, C., Wubet, T., Kleinsteuber, S., Tarkka, M.T., Harms, H., Buscot, F., Richnow, H.-H., von Bergen, M., Seifert, J., (2012):
    Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium
    ISME J. 6 (12), 2291 - 2301
    Volltext (URL)
  • Wu, Y.T., Gutknecht, J.L.M., Nadrowski, K., Geißler, C., Kühn, P., Scholten, T., Both, S., Erfmeier, A., Böhnke, M., Bruelheide, H., Wubet, T., Buscot, F., (2012):
    Relationships between soil microorganisms, plant communities, and soil characteristics in Chinese subtropical forests
    Ecosystems 15 (4), 624 - 636
    Volltext (URL)
  • Wubet, T., Christ, S., Schöning, I., Boch, S., Gawlich, M., Schnabel, B., Fischer, M., Buscot, F., (2012):
    Differences in soil fungal communities between European beech (Fagus sylvatica L.) dominated forests are related to soil and understory vegetation
    PLoS One 7 (10), e47500
    Volltext (URL)
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Selected publications

Gossner MM, Lewinsohn T, Kahl T, Grassein F, Boch S, Prati D, Birkhofer K, Renner SC, Sikorski J, Wubet T, Arndt H, Baumgartner V, Blaser S, Blüthgen N, Börschig C, Buscot F, Diekötter T, Ré Jorge L, Jung K, Keyel AC, Klein AM, Klemmer S, Krauss J, Lange M, Müller J, Overmann J, Pašalić E, Penone C, Perović D, Purschke O, Schall P, Socher SA, Sonnemann I, Tschapka M, Tscharntke T, Türke M, Venter PC, Weiner CN, Werner M, Wolters V, Wurst S, Westphal C, Fischer M, Weisser WW, Allan E. 2016.
Land-use intensification causes multitrophic homogenisation of grassland communities.
Nature. doi:10.1038/nature20575


Soliveres S, van der Plas F, Manning P, Prati D, Gossner MM, Renner SC, Alt F, Arndt H, Baumgartner V, Binkenstein J, Birkhofer K, Blaser S, Bluthgen N, Boch S, Bohm S, Borschig C, Buscot F, Diekotter T, Heinze J, Holzel N, Jung K, Klaus VH, Kleinebecker T, Klemmer S, Krauss J, Lange M, Morris EK, Muller J, Oelmann Y, Overmann J, Pasalic E, Rillig MC, Schaefer HM, Schloter M, Schmitt B, Schoning I, Schrumpf M, Sikorski J, Socher SA, Solly EF, Sonnemann I, Sorkau E, Steckel J, Steffan-Dewenter I, Stempfhuber B, Tschapka M, Turke M, Venter PC, Weiner CN, Weisser WW, Werner M, Westphal C, Wilcke W, Wolters V, Wubet T, Wurst S, Fischer M, Allan E. 2016.
Biodiversity at multiple trophic levels is needed for ecosystem multifunctionality.
Nature 536 (7617):456-459. doi:10.1038/nature19092


Hoppe B, Purahong W, Wubet T, Kahl T, Bauhus J, Arnstadt T, Hofrichter M, Buscot F, Krüger D. 2015.
Linking molecular deadwood-inhabiting fungal diversity and community dynamics to ecosystem functions and processes in Central European forests.
Fungal Diversity 77: 367. doi:10.1007/s13225-015-0341-x


Ramirez KS, Döring M, Eisenhauer N, Gardi C, Ladau J, Leff JW, Lentendu G, Lindo Z, Rillig MC, Russell D, Scheu S, St. John MG, de Vries FT, Wubet T, van der Putten WH and Wall DH (2015)
Toward a global platform for linking soil biodiversity data. Front. Ecol. Evol. 3:91. doi: 10.3389/fevo.2015.00091


Hoppe B, Krüger D, Kahl T, Arnstadt T, Buscot F, Bauhus J, Wubet T. 2015.
A pyrosequencing insight into sprawling bacterial diversity and community dynamics in decaying deadwood logs of Fagus sylvatica and Picea abies.
Scientific Reports 04/2015; 5(9456). doi:10.1038/srep09456


Gao C, Zhang Y, Shi NN, Zheng Y, Chen L, Wubet T, Bruelheide H, Both S, Buscot F, Ding Q, Erfmeier A, Kühn P, Nadrowski K, Scholten T, Guo LD. 2015.
Community assembly of ectomycorrhizal fungi along a subtropical secondary forest succession.
New Phytologist 205(2): 771-785.
doi: 10.1111/nph.13068


Stempfhuber B, Engel M, Fischer D, Neskovic-Prit G, Wubet T, Schöning I, Gubry-Rangin Cc, Kublik S, Schloter-Hai B, Rattei T, Welzl G, Nicol GW, Schrumpf M, Buscot F, Prosser JI, Schloter M. 2015.
pH as a driver for ammonia-oxidizing archaea in forest soils.
Microbial Ecology 12/2014; DOI:10.1007/ s00248-014-0548-5.

Tarkka MT, Feldhahn L, Buscot F, Wubet T. 2015.
Genome sequence of the mycorrhiza helper bacterium Streptomyces sp. Strain AcH 505.
Genome Announcements 3(2): e01386-14.

Tarkka MT, Feldhahn L, Krueger D, Arnold N, Buscot F, Wubet T. 2015.
Draft Genome Sequence of Streptomyces sp. strain 150FB, a Mushroom Mycoparasite Antagonist.
Genome Announcements 3(2):.e01441-14.

Allan E, Bossdorf O, Dormann CF, Prati D, Gossner MM, Tscharntke T, Bluethgen N, Bellach M, Birkhofer K, Boch S, Boehm S, Boerschig C, Chatzinotas A, Christ S, Daniel R, Diekoetter T, Fischer C, Friedl T, Glaser K, Hallmann C, Hodac L, Hoelzel N, Jung K, Klein AM, Klaus VH, Kleinebecker T, Krauss J, Lange M, Morris EK, Mueller J, Nacke H, Pasalic E, Rillig MC, Rothenwoehrer C, Schally P, Scherber C, Schulze W, Socher SA, Steckel J, Steffan-Dewenter I, Tuerke M, Weiner CN, Werner M, Westphal C, Wolters V, Wubet T, Gockel S, Gorke M, Hemp A, Renner SC, Schoening I, Pfeiffer S, Koenig-Ries B, Buscot F, Linsenmair KE, Schulze E-D, Weisser WW, Fischer M. 2014.
Interannual variation in land use intensity enhances grassland multidiversity.
Proceedings of the National Academy of Sciences of the United States of America 111(1): 308-313.

Bruelheide H, Nadrowski K, Assmann T, Bauhus J, Both S, Buscot F, Chen X-Y, Ding B, Durka W, Erfmeier A, Gutknecht JLM, Guo D, Guo L-D, Härdtle W, He J-S, Klein A-M, Kühn P, Liang Y, Liu X, Michalski S, Niklaus PA, Pei K, Scherer-Lorenzen M, Scholten T, Schuldt A, Seidler G, Trogisch S, von Oheimb G, Welk E, Wirth C, Wubet T, Yang X, Yu M, Zhang S, Zhou H, Fischer M, Ma K, Schmid B, Muller-Landau H. 2014.
Designing forest biodiversity experiments: general considerations illustrated by a new large experiment in subtropical China.
Methods in Ecology and Evolution 5(1): 74-89.

Goris T, Schubert T, Gadkari J, Wubet T, Tarkka M, Buscot F, Adrian L, Diekert G. 2014.
Insights into organohalide respiration and the versatile catabolism of Sulfurospirillum multivorans gained from comparative genomics and physiological studies.
Environmental microbiology 16(11): 3562-3580.

Herold N, Schöning I, Gutknecht J, Alt F, Boch S, Müller J, Oelmann Y, Socher SA, Wilcke W, Wubet T, Schrumpf M. 2014.
Soil property and management effects on grassland microbial communities across a latitudinal gradient in Germany.
Applied Soil Ecology 73: 41-50.

Hoppe B, Kahl T, Karasch P, Wubet T, Bauhus J, Buscot F, Krueger D. 2014.
Network Analysis Reveals Ecological Links between N-Fixing Bacteria and Wood-Decaying Fungi.
PLoS ONE 9(2): e88141.

Lentendu G, Wubet T, Chatzinotas A, Wilhelm C, Buscot F, Schlegel M. 2014.
Effects of long-term differential fertilization on eukaryotic microbial communities in an arable soil: a multiple barcoding approach.
Molecular Ecology 23(13): 3341-3355.

Morris EK, Caruso T, Buscot F, Fischer M, Hancock C, Maier TS, Meiners T, Müller C, Obermaier E, Prati D, Socher SA, Sonnemann I, Wäschke N, Wubet T, Wurst S, Rillig MC. 2014.
Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories.
Ecology and Evolution 4(18): 3514 - 3524.

Stempfhuber B, Welzl G, Wubet T, Schöning I, Marhan S, Buscot F, Kandeler E, Schloter M. 2014.
Drivers for ammonia-oxidation along a land use gradient in grassland soils.
Soil Biology and Biochemistry 69: 179-186.

Blaszkowski J, Chwat G, Kovacs GM, Gaspar BK, Ryszka P, Orlowska E, Pagano MC, Araujo FS, Buscot F, Wubet T. 2013.
Septoglomus fuscum and S. furcatum, two new species of arbuscular mycorrhizal fungi (Glomeromycota).
Mycologia 105 (3): 670-680.

Gao C, Shi NN, Liu YX, Peay KG, Zheng Y, Ding Q, Mi XC, Ma KP, Wubet T, Buscot F, Guo LD. 2013.
Host plant genus-level diversity is the best predictor of ectomycorrhizal fungal diversity in a Chinese subtropical forest.
Molecular Ecology 22(12): 3403-3414.

Kurth F, Zeitler K, Feldhahn L, Neu TR, Weber T, Kri V, Wubet T, Herrmann S, Buscot F, Tarkka MT. 2013.
Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity.
BMC microbiology 13(1): 205.

Milcu A, Allan E, Roscher C, Jenkins T, Meyer ST, Flynn D, Bessler H, Buscot F, Engels C, Gubsch M, Konig S, Lipowsky A, Loranger J, Renker C, Scherber C, Schmid B, Thebault E, Wubet T, Weisser WW, Scheu S, Eisenhauer N. 2013.
Functionally and phylogenetically diverse plant communities key to soil biota.
Ecology 94(8): 1878-1885.

Morris EK, Buscot F, Herbst C, Meiners T, Obermaier E, Waschke NW, Wubet T, Rillig MC. 2013.
Land use and host neighbor identity effects on arbuscular mycorrhizal fungal community composition in focal plant rhizosphere.
Biodiversity and Conservation 22(10): 2193-2205.

Pöritz M, Goris T, Wubet T, Tarkka MT, Buscot F, Nijenhuis I, Lechner U, Adrian L. 2013.
Genome sequences of two dehalogenation specialists Dehalococcoides mccartyi strains BTF08 and DCMB5 enriched from the highly polluted Bitterfeld region.
FEMS microbiology letters 343(2): 101-104.

Tarkka MT§, Herrmann S§, Wubet T§, Feldhahn L§, Recht S§, Kurth F§, Mailander S, Bonn M, Neef M, Angay O, Bacht M, Graf M, Maboreke H, Fleischmann F, Grams TEE, Ruess L, Schadler M, Brandl R, Scheu S, Schrey SD, Grosse I, Buscot F. 2013.
OakContigDF159.1, a reference library for studying differential gene expression in Quercus robur during controlled biotic interactions: use for quantitative transcriptomic profiling of oak roots in ectomycorrhizal symbiosis.
New Phytologist 199(2): 529-540.

Wu YT§, Wubet T§, Trogisch S, Both S, Scholten T, Bruelheide H, Buscot F. 2013.
Forest age and plant species composition determines the soil fungal community structure in a Chinese subtropical forest.
PLoS ONE 8(6): e66829.