Deborah Weise

Contact

Deborah Weise

PhD Student

Working Group Microbial Data Science

Department of Computational Biology and Chemistry
Helmholtz Centre for Environmental Research - UFZ
Permoserstr. 15, 04318 Leipzig, Germany

deborah.weise@ufz.de

Deborah Weise

Scientific Career 

  • 06/2026 - present: PhD student - Microbial Data Science Group, Department Computational Biology and Chemnistry, Helmholtz - Centre for environmental Research - UFZ Leipzig
  • 10/2023 - 05/2026: Master of Science in Bioinformatics - Martin Luther University Halle-Wittenberg
  • 10/2020 - 11/2026: Bachelor of Science in Bioinformatics - Martin Luther University Halle-Wittenberg

Research Interests

Ever since high school, I have been very interested in the natural sciences. Studying bioinformatics has allowed me to combine two very different fields of study: biology and computer science. My studies have sparked a particular interest in biological sequences, though I am also interested in algorithms, data science, and machine learning.

I am currently pursuing my PhD as part of the IDEAS project, where domain science meets data science. For my doctoral thesis, I am working with protein language models, which aim to understand the language of proteins. They are intended to help researchers gain insight into new sequences when homology-based approaches reach their limits.

Publications

  • Grau, J., Weise, D., Panster, M., Schattat, M. H., & Keilwagen, J. (2026). Improved reconstruction of transcripts and coding sequences from RNA-seq data. Nucleic Acids Research, 54(4), gkag091.