Deborah Weise
Contact
Deborah Weise
PhD Student
Working Group Microbial Data Science
Department of Computational Biology and Chemistry
Helmholtz Centre for Environmental Research - UFZ
Permoserstr. 15, 04318 Leipzig, Germany
deborah.weise@ufz.de
Scientific Career
- 06/2026 - present: PhD student - Microbial Data Science Group, Department Computational Biology and Chemnistry, Helmholtz - Centre for environmental Research - UFZ Leipzig
- 10/2023 - 05/2026: Master of Science in Bioinformatics - Martin Luther University Halle-Wittenberg
- 10/2020 - 11/2026: Bachelor of Science in Bioinformatics - Martin Luther University Halle-Wittenberg
Research Interests
Ever since high school, I have been very interested in the natural sciences. Studying bioinformatics has allowed me to combine two very different fields of study: biology and computer science. My studies have sparked a particular interest in biological sequences, though I am also interested in algorithms, data science, and machine learning.
I am currently pursuing my PhD as part of the IDEAS project, where domain science meets data science. For my doctoral thesis, I am working with protein language models, which aim to understand the language of proteins. They are intended to help researchers gain insight into new sequences when homology-based approaches reach their limits.
Publications
- Grau, J., Weise, D., Panster, M., Schattat, M. H., & Keilwagen, J. (2026). Improved reconstruction of transcripts and coding sequences from RNA-seq data. Nucleic Acids Research, 54(4), gkag091.