Dr. Hermann J. Heipieper
Contact/Address
Phone +49 341 6025 1694
Office: Building 1.0, Room 121
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Research areas
- Degradation of xenobiotic compounds such as herbicides in the presence of naturally occuring environmental conditions (see EU-project HERBICBIOREM)
- Adaptation of bacteria to toxic organic solvents to allow the performance of two-liquid-phase biotransformations for the econimically sound production of fine chemicals (see EU-project BARTOLO)
- Development of lipids as biomarkers to monitor and assess bioremediation processes of contaminated soils and waters (see EU-project BIOTOOL BIOTOOL)
- Application of isotope techniques to investigate the interactions of plants with microbes in contaminated soils (see EU-project AXIOM)
- Investigation of bacterial adaptation to cellular stress on the level of membranes, surface properties, and energetics. Bioengineering of contaminated sites to accelerate bioremediation (see EU-project BACSIN)
- Elucidation and application of fundamental mechanisms of bacterial stress tolerance and establishment of novel Pseudomonads as a biocatalytic platform for application in biotechnological processes with high chemical stress (BMBF Project: N NO-STRESS)
- Rhizospheric processes in planted system such as constructed wetlands to foster bioremediation or organic pollutants.
- Member of the consortium of the Centre for Biocatalysis MiKat
Curriculum Vitae
1981-87
Study of Biology/Microbiology at the Institute for Microbiology (Prof. Hans-Jürgen Rehm) of the University of Münster, Germany
1988-91
Ph.D in Microbiology at the Institute for Microbiology (Prof. Hans-Jürgen Rehm) of the University of Münster, Germany
1993-96
PostDoc at the Department of Industrial Microbiology (Prof. Jan de Bont) of the Wageningen Agricultural University, Wageningen, The Netherlands
1996-98
PostDoc at the Department of Microbiology (Prof. Elisabetta Zennaro) of the University of Rome, Italy
1998-99
Invited guest scientist at the Department of Environmental Health of the Consorzio Mario Negri Sud (CMNS), Santa Maria Imbaro, Chieti, Italy
Since 1999
Senior Scientist at the Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.
Projects
2000-02
“Strategies to accelerate the productive biodegradation of several herbicides under environmental stress conditions” (HERBICBIOREM)
2002-04
“Solvent-tolerant bacteria allowing a broader performance of biotransformations of organic compounds in two-phases fermentation systems” (BARTOLO)
2004-07
“Biological procedures for diagnosing the status and predicting evolution of polluted environments” (BIOTOOL)
2005-09
“Assessment of in situ Transformation of Xenobiotic Organic Material” (AXIOM)
2008-2012
“Bacterial abiotic cellular stress and survival improvement” (BACSIN)
2015-2019
"From Plastic waste to Plastic value using Pseudomonas putida Synthetic Biology." P4SB
2020-23
“Elucidation and application of fundamental mechanisms of bacterial stress tolerance and establishment of novel Pseudomonads as a biocatalytic platform for application in biotechnological processes with high chemical stress” (BMBF Project: NO-STRESS)
2022-27
“Use and management of finest particulate anthropogenic material flows in a sustainable circular economy” (Helmholtz Sustainability Challenge Project: FINEST)
Research Networks
Memberships
- Editor of FEMS Microbiology Letters (since 2009)
- Editor of Applied Microbiology and Biotechnology (since 2022)
Member of the Editorial Board of
- Applied and Environmental Microbiology (since 2003)
- Microbial Biotechnology (since 2007)
- Applied Microbiology and Biotechnology (since 2008)
- Microorganisms (since 2020)
Publications: Hermann Heipieper Publications (158.1 KB)
2024 (3)
- Bitzenhofer, N.L., Höfel, C., Thies, S., Weiler, A.J., Eberlein, C., Heipieper, H.J., Batra-Safferling, R., Sundermeyer, P., Heidler, T., Sachse, C., Busche, T., Kalinowski, J., Belthle, T., Drepper, T., Jaeger, K.-E., Loeschcke, A. (2024):
Exploring engineered vesiculation by Pseudomonas putida KT2440 for natural product biosynthesis
Microb. Biotechnol. 17 (1), e14312 10.1111/1751-7915.14312 - Diefenbach, T., Sumetzberger-Hasinger, M., Braunschmid, V., Konegger, H., Heipieper, H.J., Guebitz, G.M., Lackner, M., Ribitsch, D., Loibner, A.P. (2024):
Laccase-mediated degradation of petroleum hydrocarbons in historically contaminated soil
Chemosphere 348 , art. 140733 10.1016/j.chemosphere.2023.140733 - Parus, A., Ciesielski, T., Woźniak-Karczewska, M., Ławniczak, Ł., Janeda, M., Ślachciński, M., Radzikowska-Kujawska, D.l, Owsianiak, M., Marecik, R., Loibner, A.P., Heipieper, H.J., Chrzanowski, Ł. (2024):
Critical evaluation of the performance of rhamnolipids as surfactants for (phyto)extraction of Cd, Cu, Fe, Pb and Zn from copper smelter-affected soil
Sci. Total Environ. 912 , art. 168382 10.1016/j.scitotenv.2023.168382
2023 (10)
- Bernat, P., Jasińska, A., Niedziałkowska, K., Słaba, M., Różalska, S., Paraszkiewicz, K., Sas-Paszt, L., Heipieper, H.J. (2023):
Adaptation of the metolachlor-degrading fungus Trichoderma harzianum to the simultaneous presence of low-density polyethylene (LDPE) microplastics
Ecotox. Environ. Safe. 267 , art. 115656 10.1016/j.ecoenv.2023.115656 - Cárdenas Espinosa, M.J., Schmidgall, T., Pohl, J., Wagner, G., Wynands, B., Wierckx, N., Heipieper, H.J., Eberlein, C. (2023):
Assessment of new and genome-reduced Pseudomonas strains regarding their robustness as chassis in biotechnological applications
Microorganisms 11 (4), art. 837 10.3390/microorganisms11040837 - Lisiecka, N., Ciesielski, T., Sopata, O., Parus, A., Wozniak-Karczewska, M., Simpson, M., Frankowski, R., Zgola-Grzeskowiak, A., Kloziński, A., Siwinska-Ciesielczyk, K., Klapiszewski, Ł., Niemczak, M., Owsianiak, M., Heipieper, H.J., Chrzanowski, Ł. (2023):
Sorption of ionic liquids in soil enriched with polystyrene microplastic reveals independent behavior of cations and anions
Chemosphere 341 , art. 139927 10.1016/j.chemosphere.2023.139927 - Parus, A., Ciesielski, T., Woźniak-Karczewska, M., Ślachciński, M., Owsianiak, M., Ławniczak, Ł., Loibner, A.P., Heipieper, H.J., Chrzanowski, Ł. (2023):
Basic principles for biosurfactant-assisted (bio)remediation of soils contaminated by heavy metals and petroleum hydrocarbons – A critical evaluation of the performance of rhamnolipids
J. Hazard. Mater. 443, Part A , art. 130171 10.1016/j.jhazmat.2022.130171 - Parus, A., Zdebelak, O., Ciesielski, T., Szumski, R., Woźniak-Karczewska, M., Framski, G., Baranowski, D., Niemczak, M., Zembrzuska, J., Cajthaml, T., Heipieper, H.J., Chrzanowski, Ł. (2023):
Can ionic liquids exist in the soil environment? Effect of quaternary ammonium cations on glyphosate sorption, mobility and toxicity in the selected herbicidal ionic liquids
J. Mol. Liq. 370 , art. 120981 10.1016/j.molliq.2022.120981 - Schwanemann, T., Urban, E.A., Eberlein, C., Gätgens, J., Rago, D., Krink, M., Nikel, P.I., Heipieper, H.J., Wynands, B., Wierckx, N. (2023):
Production of (hydroxy)benzoate-derived polyketides by engineered Pseudomonas with in situ extraction
Bioresour. Technol. 388 , art. 129741 10.1016/j.biortech.2023.129741 - Strotmann, U., Thouand, G., Pagga, U., Gartiser, S., Heipieper, H.J. (2023):
Toward the future of OECD/ISO biodegradability testing-new approaches and developments
Appl. Microbiol. Biotechnol. 107 (7-8), 2073 - 2095 10.1007/s00253-023-12406-6 - Wilms, W., Parus, A., Homa, J., Batycka, M., Niemczak, M., Woźniak-Karczewska, M., Trzebny, A., Zembrzuska, J., Dabert, M., Táncsics, A., Cajthaml, T., Heipieper, H.J., Chrzanowski, Ł. (2023):
Glyphosate versus glyphosate based ionic liquids: Effect of cation on glyphosate biodegradation, soxA and phnJ genes abundance and microbial populations changes during soil bioaugmentation
Chemosphere 316 , art. 137717 10.1016/j.chemosphere.2022.137717 - Wilms, W., Woźniak-Karczewska, M., Niemczak, M., Parus, A., Frankowski, R., Wolko, L., Czarny, J., Piotrowska-Cyplik, A., Zgoła-Grześkowiak, A., Heipieper, H.J., Chrzanowski, Ł. (2023):
2,4-D versus 2,4-D based ionic liquids: Effect of cation on herbicide biodegradation, tfdA genes abundance and microbiome changes during soil bioaugmentation
J. Hazard. Mater. 452 , art. 131209 10.1016/j.jhazmat.2023.131209 - Wynands, B., Wierckx, N., Heipieper, H.J., Eberlein, C. (2023):
Pseudomonas taiwanensis VLB120 als Plattform für die Biotechnologie
Biospektrum 29 (6), 686 - 688 10.1007/s12268-023-2015-7
2022 (3)
- Chautrand, T., Depayras, S., Souak, D., Kondakova, T., Barreau, M., Kentache, T., Hardouin, J., Tahrioui, A., Thoumire, O., Konto-Ghiorghi, Y., Barbey, C., Ladam, G., Chevalier, S., Heipieper, H.J., Orange, N., Duclairoir-Poc, C. (2022):
Gaseous NO2 induces various envelope alterations in Pseudomonas fluorescens MFAF76a
Sci. Rep. 12 , art. 8528 10.1038/s41598-022-11606-w - Puiggené, Ò., Cárdenas Espinosa, M.J., Schlosser, D., Thies, S., Jehmlich, N., Kappelmeyer, U., Schreiber, S., Wibberg, D., Kalinowski, J., Harms, H., Heipieper, H.J., Eberlein, C. (2022):
Extracellular degradation of a polyurethane oligomer involving outer membrane vesicles and further insights on the degradation of 2,4-diaminotoluene in Pseudomonas capeferrum TDA1
Sci. Rep. 12 , art. 2666 10.1038/s41598-022-06558-0 - Riesbeck, S., Petruschke, H., Rolle-Kampczyk, U., Schori, C., Ahrens, C.H., Eberlein, C., Heipieper, H.J., von Bergen, M., Jehmlich, N. (2022):
Adaptation and resistance: How Bacteroides thetaiotaomicron copes with the bisphenol A substitute bisphenol F
Microorganisms 10 (8), art. 1610 10.3390/microorganisms10081610
2021 (6)
- Bitzenhofer, N.L., Kruse, L., Thies, S., Wynands, B., Lechtenberg, T., Rönitz, J., Kozaeva, E., Wirth, N.T., Eberlein, C., Jaeger, K.-E., Nikel, P.I., Heipieper, H.J., Wierckx, N., Loeschcke, A. (2021):
Towards robust Pseudomonas cell factories to harbour novel biosynthetic pathways
Essays Biochem. 65 (2), 319 - 336 10.1042/EBC20200173 - Burot, C., Amiraux, R., Bonin, P., Guasco, S., Babin, M., Joux, F., Marie, D., Vilgrain, L., Heipieper, H.J., Rontani, J.-F. (2021):
Viability and stress state of bacteria associated with primary production or zooplankton-derived suspended particulate matter in summer along a transect in Baffin Bay (Arctic Ocean)
Sci. Total Environ. 770 , art. 145252 10.1016/j.scitotenv.2021.145252 - Cárdenas Espinosa, M.J., Colina Blanco, A., Heipieper, H.J., Eberlein, C. (2021):
Screening and cultivating microbial strains able to grow on building blocks of polyurethane
In: Weber, G., Bornscheuer, U.T., Wei, R. (eds.)
Enzymatic plastic degradation
Methods Enzymol. 648
Elsevier, p. 423 - 434 10.1016/bs.mie.2020.12.008 - Cárdenas Espinosa, M.J., Schmidgall, T., Wagner, G., Kappelmeyer, U., Schreiber, S., Heipieper, H.J., Eberlein, C. (2021):
An optimized method for RNA extraction from the polyurethane oligomer degrading strain Pseudomonas capeferrum TDA1 growing on aromatic substrates such as phenol and 2,4-diaminotoluene
PLOS One 16 (11), e0260002 10.1371/journal.pone.0260002 - Massicotte, P., Amon, R.M.W., Antoine, D., Archambault, P., Balzano, S., Bélanger, S., Benner, R., Boeuf, D., Bricaud, A., Bruyant, F., Chaillou, G., Chami, M., Charrière, B., Chen, J., Claustre, H., Coupel, P., Delsaut, N., Doxaran, D., Ehn, J., Fichot, C., Forget, M.-H., Fu, P., Gagnon, J., Garcia, N., Gasser, B., Ghiglione, J.-F., Gorsky, G., Gosselin, M., Gourvil, P., Gratton, Y., Guillot, P., Heipieper, H.J., Heussner, S., Hooker, S.B., Huot, Y., Jeanthon, C., Jeffrey, W., Joux, F., Kawamura, K., Lansard, B., Leymarie, E., Link, H., Lovejoy, C., Marec, C., Marie, D., Martín, J., Massé, G., Matsuoka, A., McKague, V., Mignot, A., Miller, W.L., Miquel, J.-C., Mucci, A., Ono, K., Ortega-Retuerta, E., Panagiotopoulos, C., Papakyriakou, T., Picheral, M., Piepenburg, D., Prieur, L., Raimbault, P., Ras, J., Reynolds, R.A., Rochon, A., Rontani, J.-F., Schmechtig, C., Schmidt, S., Sempéré, R., Shen, Y., Song, G., Stramski, D., Tachibana, E., Thirouard, A., Tolosa, I., Tremblay, J.-E., Vaïtilingom, M., Vaulot, D., Vaultier, F., Volkman, J.K., Xie, H., Zheng, G., Babin, M. (2021):
The MALINA oceanographic expedition: how do changes in ice cover, permafrost and UV radiation impact biodiversity and biogeochemical fluxes in the Arctic Ocean?
Earth Syst. Sci. Data 13 (4), 1561 - 1592 10.5194/essd-13-1561-2021 - Utomo, R.N.C., Heipieper, H.J., Eberlein, C., Blank, L.M. (2021):
New species Pseudomonas capeferrum TDA1 as a plastic monomer utilizer and a PHA native producer
IOP Conf. Ser.: Earth Environ. Sci. 894 (1), art. 012024 10.1088/1755-1315/894/1/012024
2020 (10)
- Ławniczak, Ł., Woźniak‐Karczewska, M., Loibner, A.P., Heipieper, H.J., Chrzanowski, Ł. (2020):
Microbial degradation of hydrocarbons—basic principles for bioremediation: A review
Molecules 25 (4), art. 856 10.3390/molecules25040856 - Balciunas, E.M., Kappelmeyer, U., Harms, H., Heipieper, H.J. (2020):
Increasing ibuprofen degradation in constructed wetlands by bioaugmentation with gravel containing biofilms of an ibuprofen-degrading Sphingobium yanoikuyae
Eng. Life Sci. 20 (5-6), 160 - 167 10.1002/elsc.201900097 - Blesken, C.C., Bator, I., Eberlein, C., Heipieper, H.J., Tiso, T., Blank, L.M. (2020):
Genetic cell-surface modification for optimized foam fractionation
Front. Bioeng. Biotechnol. 8 , art. 572892 10.3389/fbioe.2020.572892 - Cárdenas Espinosa, M.J., Colina Blanco, A., Schmidgall, T., Atanasoff-Kardjalieff, A.K., Kappelmeyer, U., Tischler, D., Pieper, D.H., Heipieper, H.J., Eberlein, C. (2020):
Towards biorecycling: Isolation of a soil bacterium that grows on a polyurethane oligomer and monomer
Front. Microbiol. 11 , art. 404 10.3389/fmicb.2020.00404 - Chautrand, T., Souak, D., Kondakova, T., Depayras, S., Merlet-Machour, N., Heipieper, H.J., Feuilloley, M., Orange, N., Duclairoir-Poc, C. (2020):
Air pollution and other environmental stresses: gaseous NO2 exposure leads to specific alterations of Pseudomonas fluorescens
In: Casares, J., Longhurst, J., Barnes, J. (eds.)
Air pollution XXVIII
WIT Transactions on Ecology and the Environment 244
WIT Press, Southampton, p. 53 - 63 10.2495/AIR200051 - Cierniak, D., Woźniak-Karczewska, M., Parus, A., Wyrwas, B., Loibner, A.P., Heipieper, H.J., Ławniczak, Ł., Chrzanowski, Ł. (2020):
How to accurately assess surfactant biodegradation-impact of sorption on the validity of results
Appl. Microbiol. Biotechnol. 104 (1), 1 - 12 10.1007/s00253-019-10202-9 - Meyer-Cifuentes, I., Gruhl, S., Haange, S.-B., Lünsmann, V., Jehmlich, N., von Bergen, M., Heipieper, H.J., Müller, J.A. (2020):
Benzylsuccinate synthase is post-transcriptionally regulated in the toluene-degrading denitrifier Magnetospirillum sp. strain 15-1
Microorganisms 8 (5), art. 681 10.3390/microorganisms8050681 - Schäpe, S.S., Krause, J.L., Masanetz, R.K., Riesbeck, S., Starke, R., Rolle-Kampczyk, U., Eberlein, C., Heipieper, H.J., Herberth, G., von Bergen, M., Jehmlich, N. (2020):
Environmentally relevant concentration of bisphenol S shows slight effects on SIHUMIx
Microorganisms 8 (9), art. 1436 10.3390/microorganisms8091436 - Schifano, E., Cicalini, I., Pieragostino, D., Heipieper, H.J., Del Boccio, P., Uccelletti, D. (2020):
In vitro and in vivo lipidomics as a tool for probiotics evaluation
Appl. Microbiol. Biotechnol. 104 (20), 8937 - 8948 10.1007/s00253-020-10864-w - Utomo, R.N.C., Li, W.-J., Tiso, T., Eberlein, C., Doeker, M., Heipieper, H.J., Jupke, A., Wierckx, N., Blank, L.M. (2020):
Defined microbial mixed culture for utilization of polyurethane monomers
ACS Sustain. Chem. Eng. 8 (47), 17466 - 17474 10.1021/acssuschemeng.0c06019
2019 (5)
- Eberlein, C., Starke, S., Escobar Doncel, Á., Scarabotti, F., Heipieper, H.J. (2019):
Quantification of outer membrane vesicles: a potential tool to compare response in Pseudomonas putida KT2440 to stress caused by alkanols
Appl. Microbiol. Biotechnol. 103 (10), 4193 - 4201 10.1007/s00253-019-09812-0 - Pęziak-Kowalska, D., Syguda, A., Ławniczak, Ł., Borkowski, A., Fourcade, F., Heipieper, H.J., Lota, G., Chrzanowski, Ł. (2019):
Hybrid electrochemical and biological treatment of herbicidal ionic liquids comprising the MCPA anion
Ecotox. Environ. Safe. 181 , 172 - 179 10.1016/j.ecoenv.2019.05.084 - Vásquez Piñeros, M.A., Martínez-Lavanchy, P.M., Schmidt, K., Mardones, M., Heipieper, H.J. (2019):
Changes in bacterial diversity and catabolic gene abundance during the removal of dimethylphenol isomers in laboratory scale constructed wetlands
Appl. Microbiol. Biotechnol. 103 (1), 505 - 517 10.1007/s00253-018-9479-2 - Wierckx, N., Narancic, T., Eberlein, C., Wei, R., Drzyzga, O., Magnin, A., Ballerstedt, H., Kenny, S., Pollet, E., Avérous, L., O’Connor, K.E., Zimmermann, W., Heipieper, H.J., Prieto, A., Jiménez, J., Blank, L.M. (2019):
Plastic biodegradation: challenges and opportunities
In: Steffan, R. (ed.)
Consequences of microbial interactions with hydrocarbons, oils, and lipids: Biodegradation and bioremediation
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 333 - 361 10.1007/978-3-319-44535-9_23-1 - Woźniak-Karczewska, M., Lisiecki, P., Białas, W., Owsianiak, M., Piotrowska-Cyplik, A., Wolko, L., Ławniczak, Ł., Heipieper, H.J., Gutierrez, T., Chrzanowski, Ł. (2019):
Effect of bioaugmentation on long-term biodegradation of diesel/biodiesel blends in soil microcosms
Sci. Total Environ. 671 , 948 - 958 10.1016/j.scitotenv.2019.03.431
2018 (15)
- Atashgahi, S., Sánchez-Andrea, I., Heipieper, H.J., van der Meer, J.R., Stams, A.J.M., Smidt, H. (2018):
Prospects for harnessing biocide resistance for bioremediation and detoxification
Science 360 (6390), 743 - 746 10.1126/science.aar3778 - Bjerketorp, J., Röling, W.F.M., Feng, X.-M., Hernández Garcia, A., Heipieper, H.J., Håkansson, S. (2018):
Formulation and stabilization of an Arthrobacter strain with good storage stability and 4-chlorophenol-degradation activity for bioremediation
Appl. Microbiol. Biotechnol. 102 (4), 2031 - 2040 10.1007/s00253-017-8706-6 - Concha, E., Heipieper, H.J., Wick, L.Y., Ciudad, G.A., Navia, R. (2018):
Effects of limonene, n-decane and n-decanol on growth and membrane fatty acid composition of the microalga Botryococcus braunii
AMB Express 8 (1), art. 189 10.1186/s13568-018-0718-9 - Depayras, S., Kondakova, T., Heipieper, H.J., Feuilloley, M.G.J., Orange, N., Duclairoir-Poc, C. (2018):
The hidden face of nitrogen oxides species: from toxic effects to potential cure?
In: Soloneski, S., Larramendy, M.L. (eds.)
Emerging pollutants - Some strategies for the quality preservation of our environment
InTechOpen, London, p. 19 - 44 10.5772/intechopen.75822 - Depayras, S., Kondakova, T., Merlet-Machour, N., Heipieper, H.J., Barreau, M., Catovic, C., Feuilloley, M., Orange, N., Duclairoir-Poc, C. (2018):
Impact of gaseous NO2 on P. fluorescens strain in the membrane adaptation and virulence
International Journal of Environmental Impacts 1 (2), 183 - 192 10.2495/EI-V1-N2-183-192 - Eberlein, C., Baumgarten, T., Starke, S., Heipieper, H.J. (2018):
Immediate response mechanisms of Gram-negative solvent-tolerant bacteria to cope with environmental stress: cis-trans isomerization of unsaturated fatty acids and outer membrane vesicle secretion
Appl. Microbiol. Biotechnol. 102 (6), 2583 - 2593 10.1007/s00253-018-8832-9 - Fléchard, M., Duchesne, R., Tahrioui, A., Bouffartigues, E., Depayras, S., Hardouin, J., Lagy, C., Maillot, O., Tortuel, D., Azuama, C.O., Clamens, T., Duclairoir-Poc, C., Catel-Ferreira, M., Gicquel, G., Feuilloley, M.G.J., Lesouhaitier, O., Heipieper, H.J., Groleau, M.-C., Déziel, E., Cornelis, P., Chevalier, S. (2018):
The absence of SigX results in impaired carbon metabolism and membrane fluidity in Pseudomonas aeruginosa
Sci. Rep. 8 , art. 17212 10.1038/s41598-018-35503-3 - Heipieper, H.J., Fischer, J., Meinhardt, F. (2018):
Cis-trans isomerase of unsaturated fatty acids: an immediate bacterial adaptive mechanism to cope with emerging membrane perturbation caused by toxic hydrocarbons
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 385 - 395 10.1007/978-3-319-50542-8_49 - Heipieper, H.J., Martínez, P.M. (2018):
Toxicity of hydrocarbons to microorganisms
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 335 - 344 10.1007/978-3-319-50542-8_45 - Heipieper, H.J., Pepi, M., Baumgarten, T., Eberlein, C. (2018):
Surface properties and cellular energetics of bacteria in response to the presence of hydrocarbons
In: Krell, T. (ed.)
Cellular ecophysiology of microbe: Hydrocarbon and lipid interactions
Handbook of Hydrocarbon and Lipid Microbiology
Springer International Publishing, Cham, p. 397 - 408 10.1007/978-3-319-50542-8_50 - Konieczna, M., Olzog, M., Naether, D.J., Chrzanowski, Ł., Heipieper, H.J. (2018):
Membrane fatty acid composition and cell surface hydrophobicity of marine hydrocarbonoclastic Alcanivorax borkumensis SK2 grown on diesel, biodiesel and rapeseed oil as carbon sources
Molecules 23 (6), art. 1432 10.3390/molecules23061432 - Piotrowska, A., Syguda, A., Wyrwas, B., Chrzanowski, Ł., Luckenbach, T., Heipieper, H.J. (2018):
Effects of ammonium-based ionic liquids and 2,4-dichlorophenol on the phospholipid fatty acid composition of zebrafish embryos
PLOS One 13 (1), e0190779 10.1371/journal.pone.0190779 - Sydow, M., Owsianiak, M., Framski, G., Woźniak-Karczewska, M., Piotrowska-Cyplik, A., Ławniczak, Ł., Szulc, A., Zgoła-Grześkowiak, A., Heipieper, H.J., Chrzanowski, Ł. (2018):
Biodiversity of soil bacteria exposed to sub-lethal concentrations of phosphonium-based ionic liquids: Effects of toxicity and biodegradation
Ecotox. Environ. Safe. 147 , 157 - 164 10.1016/j.ecoenv.2017.08.026 - Vásquez-Piñeros, M.A., Martínez-Lavanchy, P.M., Jehmlich, N., Pieper, D.H., Rincón, C.A., Harms, H., Junca, H., Heipieper, H.J. (2018):
Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradation
BMC Microbiol. 18 , art. 108 10.1186/s12866-018-1255-z - Wunderlich, A., Heipieper, H.J., Elsner, M., Einsiedl, F. (2018):
Solvent stress-induced changes in membrane fatty acid composition of denitrifying bacteria reduce the extent of nitrogen stable isotope fractionation during denitrification
Geochim. Cosmochim. Acta 239 , 275 - 283 10.1016/j.gca.2018.07.037
2017 (12)
- Baumgarten, T., Schlegel, S., Wagner, S., Löw, M., Eriksson, J., Bonde, I., Herrgård, M.J., Heipieper, H.J., Nørholm, M.H.H., Slotboom, D.J., de Gier, J.W. (2017):
Isolation and characterization of the E. coli membrane protein production strain Mutant56(DE3)
Sci. Rep. 7 , art. 45089 10.1038/srep45089 - Chernikova, T.N., Dallimore, J., Lünsdorf, H., Heipieper, H.J., Golyshin, P.N. (2017):
Monaibacterium marinum, gen. nov, sp. nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK
Int. J. Syst. Evol. Microbiol. 67 (9), 3310 - 3317 10.1099/ijsem.0.002111 - Fida, T.T., Moreno-Forero, S.K., Breugelmans, P., Heipieper, H.J., Roling, W.F.M., Springael, D. (2017):
Physiological and transcriptome response of the polycyclic aromatic hydrocarbon degrading Novosphingobium sp. LH128 after inoculation in soil
Environ. Sci. Technol. 51 (3), 1570 - 1579 10.1021/acs.est.6b03822 - Hachicho, N., Birnbaum, A., Heipieper, H.J. (2017):
Osmotic stress in colony and planktonic cells of Pseudomonas putida mt-2 revealed significant differences in adaptive response mechanisms
AMB Express 7 , art. 62 10.1186/s13568-017-0371-8 - Heipieper, H.J. (2017):
Farewell Prof. Hans-Jürgen Rehm
Microb. Biotechnol. 10 (2), 223 10.1111/1751-7915.12703 - Heipieper, H.J., Hachicho, N. (2017):
Bacterial solvent responses and tolerance: cis–trans isomerization
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Activities and phenotypes
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 111 - 118 10.1007/8623_2014_16 - Koelschbach, J.S., Mouttaki, H., Pickl, C., Heipieper, H.J., Rachel, R., Lawson, P.A., Meckenstock, R.U. (2017):
Rectinema cohabitans gen. nov., sp. nov., a rod-shaped spirochaete isolated from an anaerobic naphthalene-degrading enrichment culture
Int. J. Syst. Evol. Microbiol. 67 (5), 1288 - 1295 10.1099/ijsem.0.001799 - Meyer-Cifuentes, I., Fiedler, S., Müller, J.A., Kappelmeyer, U., Mäusezahl, I., Heipieper, H.J. (2017):
Draft genome sequence of Magnetospirillum sp. strain 15-1, a denitrifying toluene degrader isolated from a planted fixed-bed reactor
Genome Announc. 5 (32), e00764-17 10.1128/genomeA.00764-17 - Meyer-Cifuentes, I., Martinez-Lavanchy, P.M., Marin-Cevada, V., Böhnke, S., Harms, H., Müller, J.A., Heipieper, H.J. (2017):
Isolation and characterization of Magnetospirillum sp. strain 15-1 as a representative anaerobic toluene-degrader from a constructed wetland model
PLOS One 12 (4), e0174750 10.1371/journal.pone.0174750 - Pepi, M., Heipieper, H.J., Balestra, C., Borra, M., Biffali, E., Casotti, R. (2017):
Toxicity of diatom polyunsaturated aldehydes to marine bacterial isolates reveals their mode of action
Chemosphere 177 , 258 - 265 10.1016/j.chemosphere.2017.03.031 - Piotrowska, A., Syguda, A., Wyrwas, B., Chrzanowski, Ł., Heipieper, H.J. (2017):
Toxicity evaluation of selected ammonium-based ionic liquid forms with MCPP and dicamba moieties on Pseudomonas putida
Chemosphere 167 , 114 - 119 10.1016/j.chemosphere.2016.09.140 - Soares-Castro, P., Montenegro-Silva, P., Heipieper, H.J., Santos, P.M. (2017):
Functional characterization of a 28-kilobase catabolic island from Pseudomonas sp. M1 involved in biotransformation of β-myrcene and related plant-derived volatiles
Appl. Environ. Microb. 83 (9), e03112-16 10.1128/AEM.03112-16
2016 (9)
- Baumgarten, T., Heipieper, H.J. (2016):
Outer membrane vesicle secretion: from envelope stress to biofilm formation. Chapter 22.9
In: de Bruijn, F.J. (ed.)
Stress and environmental control of gene expression in bacteria
Wiley-Blackwell, p. 1322 - 1327 10.1002/9781119004813.ch129 - de Carvalho, C.C.C.R., Fischer, M.A., Kirsten, S., Würz, B., Wick, L.Y., Heipieper, H.J. (2016):
Adaptive response of Rhodococcus opacus PWD4 to salt and phenolic stress on the level of mycolic acids
AMB Express 6 , art. 66 10.1186/s13568-016-0241-9 - Hachicho, N., Heipieper, H.J. (2016):
Isolation and analysis of membrane phospholipids as biomarkers
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Biochemical methods
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 123 - 132 10.1007/8623_2014_17 - Heipieper, H.J. (2016):
Introduction
In: McGenity, T.J., Timmis, K.N., Nogales, B. (eds.)
Hydrocarbon and lipid microbiology protocols. Biochemical methods
Springer Protocols Handbooks
Springer, Berlin, Heidelberg, p. 1 - 2 10.1007/8623_2015_180 - Koechler, S., Bertin, P.N., Plewniak, F., Baltenweck, R., Casiot, C., Heipieper, H.J., Bouchez, O., Arsène-Ploetze, F., Hugueney, P., Halter, D. (2016):
Arsenite response in Coccomyxa sp. Carn explored by transcriptomic and non-targeted metabolomic approaches
Environ. Microbiol. 18 (4), 1289 - 1300 10.1111/1462-2920.13227 - Lahesaare, A., Ainelo, H., Teppo, A., Kivisaar, M., Heipieper, H.J., Teras, R. (2016):
LapF and its regulation by Fis affect the cell surface hydrophobicity of Pseudomonas putida
PLOS One 11 (11), e0166078 10.1371/journal.pone.0166078 - Lünsmann, V., Kappelmeyer, U., Benndorf, R., Martínez-Lavanchy, P.M., Taubert, A., Adrian, L., Duarte, M., Pieper, D.H., von Bergen, M., Müller, J.A., Heipieper, H.J., Jehmlich, N. (2016):
In situ protein-SIP highlights Burkholderiaceae as key players degrading toluene by para ring hydroxylation in a constructed wetland model
Environ. Microbiol. 18 (4), 1176 - 1186 10.1111/1462-2920.13133 - Lünsmann, V., Kappelmeyer, U., Taubert, A., Nijenhuis, I., von Bergen, M., Heipieper, H.J., Müller, J.A., Jehmlich, N. (2016):
Aerobic toluene degraders in the rhizosphere of a constructed wetland model show diurnal polyhydroxyalkanoate metabolism
Appl. Environ. Microb. 82 (14), 4126 - 4132 10.1128/AEM.00493-16 - Piotrowska, A., Syguda, A., Chrzanowski, Ł., Heipieper, H.J. (2016):
Toxicity of synthetic herbicides containing 2,4-D and MCPA moieties towards Pseudomonas putida mt-2 and its response at the level of membrane fatty acid composition
Chemosphere 144 , 107 - 112 10.1016/j.chemosphere.2015.08.067
2015 (6)
- Freel, K.C., Krueger, M.C., Farasin, J., Brochier-Armanet, C., Barbe, V., Andrès, J., Cholley, P.-E., Dillies, M.-A., Jagla, B., Koechler, S., Leva, Y., Magdelenat, G., Plewniak, F., Proux, C., Coppée, J.-Y., Bertin, P.N., Heipieper, H.J., Arsène-Ploetze, F. (2015):
Adaptation in toxic environments: arsenic genomic islands in the bacterial genus Thiomonas
PLOS One 10 (9), e0139011 10.1371/journal.pone.0139011 - Hachicho, N., Reithel, S., Miltner, A., Heipieper, H.J., Küster, E., Luckenbach, T. (2015):
Body mass parameters, lipid profiles and protein contents of zebrafish embryos and effects of 2,4-dinitrophenol exposure
PLOS One 10 (8), e0134755 10.1371/journal.pone.0134755 - Kondakova, T., D'Heygère, F., Feuilloley, M.J., Orange, N., Heipieper, H.J., Duclairoir Poc, C. (2015):
Glycerophospholipid synthesis and functions in Pseudomonas
Chem. Phys. Lipids 190 , 27 - 42 10.1016/j.chemphyslip.2015.06.006 - Leong, S.L., Lantz, H., Pettersson, O.V., Frisvad, J.C., Thrane, U., Heipieper, H.J., Dijksterhuis, J., Grabherr, M., Pettersson, M., Tellgren-Roth, C., Schnürer, J. (2015):
Genome and physiology of the ascomycete filamentous fungus Xeromyces bisporus, the most xerophilic organism isolated to date
Environ. Microbiol. 17 (2), 496 - 513 10.1111/1462-2920.12596 - Martínez-Lavanchy, P.M., Chen, Z., Lünsmann, V., Marin-Cevada, V., Vilchez-Vargas, R., Pieper, D.H., Reiche, N., Kappelmeyer, U., Imparato, V., Junca, H., Nijenhuis, I., Müller, J.A., Kuschk, P., Heipieper, H.J. (2015):
Microbial toluene removal in hypoxic model constructed wetlands occurs predominantly via the ring monooxygenation pathway
Appl. Environ. Microb. 81 (18), 6241 - 6252 10.1128/AEM.01822-15 - Zanni, E., Maulucci, G., Pomata, D., Buiarelli, F., Krasnowska, E.K., Parasassi, T., De Spirito, M., Heipieper, H.J., Uccelletti, D. (2015):
ER stress induced by the OCH1 mutation triggers changes in lipid homeostasis in Kluyveromyces lactis
Res. Microbiol. 166 (2), 84 - 92 10.1016/j.resmic.2014.12.011
2014 (4)
- de Carvalho, C.C.C.R., Marques, M.P.C., Hachicho, N., Heipieper, H.J. (2014):
Rapid adaptation of Rhodococcus erythropolis cells to salt stress by synthesizing polyunsaturated fatty acids
Appl. Microbiol. Biotechnol. 98 (12), 5599 - 5606 10.1007/s00253-014-5549-2 - Hachicho, N., Hoffmann, P., Ahlert, K., Heipieper, H.J. (2014):
Effect of silver nanoparticles and silver ions on growth and adaptive response mechanisms of Pseudomonas putida mt-2
FEMS Microbiol. Lett. 355 (1), 71 - 77 10.1111/1574-6968.12460 - Lisiecki, P., Chrzanowski, Ł., Szulc, A., Ławniczak, Ł., Białas, W., Dziadas, M., Owsianiak, M., Staniewski, J., Cyplik, P., Marecik, R., Jeleń, H., Heipieper, H.J. (2014):
Biodegradation of diesel/biodiesel blends in saturated sand microcosms
Fuel 116 , 321 - 327 10.1016/j.fuel.2013.08.009 - Rapoport, A., Heipieper, H.J. (2014):
Biotechnological and environmental microbiological research in the Baltic region
Biotechnol. Appl. Biochem. 61 (1), 1 - 2 10.1002/bab.1210
2013 (7)
- Fida, T.T., Moreno-Forero, S.K., Heipieper, H.J., Springael, D. (2013):
Physiology and transcriptome of the polycyclic aromatic hydrocarbon-degrading Sphingomonas sp. LH128 after long-term starvation
Microbiology-(UK) 159 (9), 1807 - 1817 10.1099/mic.0.065870-0 - Kaszycki, P., Walski, T., Hachicho, N., Heipieper, H.J. (2013):
Biostimulation by methanol enables the methylotrophic yeasts Hansenula polymorpha and Trichosporon sp. to reveal high formaldehyde biodegradation potential as well as to adapt to this toxic pollutant
Appl. Microbiol. Biotechnol. 97 (12), 5555 - 5564 10.1007/s00253-013-4796-y - Kruger, M.C., Bertin, P.N., Heipieper, H.J., Arsène-Ploetze, F. (2013):
Bacterial metabolism of environmental arsenic—mechanisms and biotechnological applications
Appl. Microbiol. Biotechnol. 97 (9), 3827 - 3841 10.1007/s00253-013-4838-5 - Kube, M., Chernikova, T.N., Al-Ramahi, Y., Beloqui, A., Lopez-Cortez, N., Guazzaroni, M.-E., Heipieper, H.J., Klages, S., Kotsyurbenko, O.R., Langer, I., Nechitaylo, T.Y., Lünsdorf, H., Fernández, M., Juárez, S., Ciordia, S., Singer, A., Kagan, O., Egorova, O., Petit, P.A., Stogios, P., Kim, Y., Tchigvintsev, A., Flick, R., Denaro, R., Genovese, M., Albar, J.P., Reva, O.N., Martínez-Gomariz, M., Tran, H., Ferrer, M., Savchenko, A., Yakunin, A.F., Yakimov, M.M., Golyshina, O.V., Reinhardt, R., Golyshin, P.N. (2013):
Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica
Nat. Commun. 4 , art. 2156 10.1038/ncomms3156 - Naether, D., Slawtschew, S., Stasik, S., Engel, M., Olzog, M., Wick, L.Y., Timmis, K.N., Heipieper, H.J. (2013):
Adaptation of hydrocarbonoclastic Alcanivorax borkumensis SK2 to alkanes and toxic organic compounds - a physiological and transcriptomic approach
Appl. Environ. Microb. 79 (14), 4282 - 4293 10.1128/AEM.00694-13 - Pepi, M., Cappelli, S., Hachicho, N., Perra, G., Renzi, M., Tarabelli, A., Altieri, R., Esposito, A., Focardi, S.E., Heipieper, H.J. (2013):
Klebsiella sp. strain C2A isolated from olive oil mill waste is able to tolerate and degrade tannic acid in very high concentrations
FEMS Microbiol. Lett. 343 (2), 105 - 112 10.1111/1574-6968.12136 - Schurig, C., Smittenberg, R., Berger, J., Kraft, F., Woche, S.K., Goebel, M.-O., Heipieper, H.J., Miltner, A., Kästner, M. (2013):
Microbial cell-envelope fragments and the formation of soil organic matter - a case study from a glacier forefield
Biogeochemistry 113 (1-3), 595 - 612 10.1007/s10533-012-9791-3
2012 (6)
- Baumgarten, T., Sperling, S., Seifert, J., von Bergen, M., Steiniger, F., Wick, L.Y., Heipieper, H.J. (2012):
Membrane vesicle formation as a multiple-stress response mechanism enhances Pseudomonas putida DOT-T1E cell surface hydrophobicity and biofilm formation
Appl. Environ. Microb. 78 (17), 6217 - 6224 10.1128/AEM.01525-12 - Baumgarten, T., Vazquez, J.R., Bastisch, C., Veron, W., Feuilloley, M.G.J., Nietzsche, S., Wick, L.Y., Heipieper, H.J. (2012):
Alkanols and chlorophenols cause different physiological adaptive responses on the level of cell surface properties and membrane vesicle formation in Pseudomonas putida DOT-T1E
Appl. Microbiol. Biotechnol. 93 (2), 837 - 845 10.1007/s00253-011-3442-9 - Fida, T.T., Breugelmans, P., Lavigne, R., Coronado, E., Johnson, D.R., van der Meer, J.R., Mayer, A.P., Heipieper, H.J., Hofkens, J., Springael, D. (2012):
Exposure to solute stress affects genome-wide expression but not the PAH-degrading activity of Sphingomonas sp. LH128 in biofilms
Appl. Environ. Microb. 78 (23), 8311 - 8320 10.1128/AEM.02516-12 - Halter, D., Casiot, C., Simon, S., Heipieper, H.J., Arsène-Ploetze, F., Bertin, P.N. (2012):
Surface properties and intracellular speciation revealed an original adaptive mechanism to arsenic in the acid mine drainage bio-indicator Euglena mutabilis
Appl. Microbiol. Biotechnol. 93 (4), 1735 - 1744 10.1007/s00253-011-3493-y - Micolonghi, C., Ottaviano, D., Di Silvio, E., Damato, G., Heipieper, H.J., Bianchi, M.M. (2012):
A dual signalling pathway for the hypoxic expression of lipid genes, dependent on the glucose sensor Rag4, is revealed by the analysis of KlMGA2 gene in Kluyveromyces lactis
Microbiology-(UK) 158 (7), 1734 - 1744 10.1099/mic.0.059402-0 - Rontani, J.-F., Charriere, B., Petit, M., Vaultier, F., Heipieper, H.J., Link, H., Chaillou, G., Sempéré, R. (2012):
Degradation state of organic matter in surface sediments from the Southern Beaufort Sea: a lipid approach
Biogeosciences 9 (9), 3513 - 3530 10.5194/bg-9-3513-2012
2011 (8)
- Azócar, L., Ciudad, G., Heipieper, H.J., Muñoz, R., Navia, R. (2011):
Lipase-catalyzed process in an anhydrous medium with enzyme reutilization to produce biodiesel with low acid value
J. Biosci. Bioeng. 112 (6), 583 - 589 10.1016/j.jbiosc.2011.08.001 - Chrzanowski, Ł., Owsianiak, M., Szulc, A., Marecik, R., Piotrowska-Cyplik, A., Olejnik-Schmidt, A.K., Staniewski, J., Lisiecki, P., Ciesielczyk, F., Jesionowski, T., Heipieper, H.J. (2011):
Interactions between rhamnolipid biosurfactants and toxic chlorinated phenols enhance biodegradation of a model hydrocarbon-rich effluent
Int. Biodeterior. Biodegrad. 65 (4), 605 - 611 10.1016/j.ibiod.2010.10.015 - Cialfi, S., Uccelletti, D., Carducci, A., Wésolowski-Louvel, M., Mancini, P., Heipieper, H.J., Saliola, M. (2011):
KlHsl1 is a component of glycerol response pathways in the milk yeast Kluyveromyces lactis
Microbiology-(UK) 157 (5), 1509 - 1518 10.1099/mic.0.044040-0 - Cyplik, P., Schmidt, M., Szulc, A., Marecik, R., Lisiecki, P., Heipieper, H.J., Owsianiak, M., Vainshtein, M., Chrzanowski, Ł. (2011):
Relative quantitative PCR to assess bacterial community dynamics during degradation of diesel and biodiesel fuels under various aeration conditions
Bioresour. Technol. 102 (6), 4347 - 4352 10.1016/j.biortech.2010.12.068 - Johnson, D.R., Coronado, E., Moreno-Forero, S.K., Heipieper, H.J., van der Meer, J.R. (2011):
Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacterium Sphingomonas wittichii
BMC Microbiol. 11 , art. 250 10.1186/1471-2180-11-250 - Navia, R., Heipieper, H.J. (2011):
The role of energy-efficient biotechnological processes in the waste management industry
Waste Manage. Res. 29 (6), 563 - 564 10.1177/0734242X11409803 - Pandey, J., Heipieper, H.J., Chauhan, A., Arora, P.K., Prakash, D., Takeo, M., Jain, R.K. (2011):
Reductive dehalogenation mediated initiation of aerobic degradation of 2-chloro-4-nitrophenol (2C4NP) by Burkholderia sp. strain SJ98
Appl. Microbiol. Biotechnol. 92 (3), 597 - 606 10.1007/s00253-011-3254-y - Stolpovsky, K., Martínez-Lavanchy, P.M., Heipieper, H.J., van Cappellen, P., Thullner, M. (2011):
Incorporating dormancy in dynamic microbial community models
Ecol. Model. 222 (17), 3092 - 3102 10.1016/j.ecolmodel.2011.07.006
2010 (14)
- Azócar, L., Ciudad, G., Heipieper, H.J., Muñoz, R., Navia, R. (2010):
Improving fatty acid methyl ester production yield in a lipase-catalyzed process using waste frying oils as feedstock
J. Biosci. Bioeng. 109 (6), 609 - 614 10.1016/j.jbiosc.2009.12.001 - Azócar, L., Ciudad, G., Heipieper, H.J., Navia, R. (2010):
Biotechnological processes for biodiesel production using alternative oils
Appl. Microbiol. Biotechnol. 88 (3), 621 - 636 10.1007/s00253-010-2804-z - Duldhardt, I., Gaebel, J., Chrzanowski, Ł., Nijenhuis, I., Schauer, F., Heipieper, H.J. (2010):
Adaptation of anaerobically grown Thauera aromatica, Geobacter sulfurreducens and Desulfococcus multivorans to organic solvents on the level of membrane fatty acid composition
Microb. Biotechnol. 3 (2), 201 - 209 10.1111/j.1751-7915.2009.00124.X - Fischer, J., Kappelmeyer, U., Kästner, M., Schauer, F., Heipieper, H.J. (2010):
The degradation of bisphenol A by the newly isolated bacterium Cupriavidus basilensis JF1 can be enhanced by biostimulation with phenol
Int. Biodeterior. Biodegrad. 64 (4), 324 - 330 10.1016/j.ibiod.2010.03.007 - Fischer, J., Schauer, F., Heipieper, H.J. (2010):
The trans/cis ratio of unsaturated fatty acids is not applicable as biomarker for environmental stress in case of long-term contaminated habitats
Appl. Microbiol. Biotechnol. 87 (1), 365 - 371 10.1007/s00253-010-2544-0 - Heipieper, H.J., Cornelissen, S., Pepi, M. (2010):
Surface properties and cellular energetics of bacteria as response to the presence of hydrocarbons
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 9
Springer International Publishing, Cham, p. 1615 - 1624 10.1007/978-3-540-77587-4_113 - Heipieper, H.J., Fischer, J., Meinhardt, F. (2010):
Cis-trans isomerase of unsaturated fatty acids: an immediate bacterial adaptive mechanism to cope with emerging membrane perturbation caused by toxic hydrocarbons
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 9
Springer International Publishing, Cham, p. 1605 - 1614 10.1007/978-3-540-77587-4_112 - Heipieper, H.J., Fischer, J. (2010):
Bacterial solvent responses and tolerance: cis-trans isomerization
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Experimental protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 4
Springer International Publishing, Cham, p. 4203 - 4211 10.1007/978-3-540-77587-4_328 - Heipieper, H.J., Martínez, P.M. (2010):
Toxicity of hydrocarbons to microorganisms
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Microbial utilization of hydrocarbons, oils and lipids
Handbook of Hydrocarbon and Lipid Microbiology Vol. 2, Part 9
Springer International Publishing, Cham, p. 1565 - 1573 10.1007/978-3-540-77587-4_108 - Heipieper, H.J. (2010):
Isolation and analysis of lipids, biomarkers
In: Timmis, K.N., McGenity, T., van den Meer, J.R., de Lorenzo, V. (eds.)
Experimental protocols and appendices
Handbook of Hydrocarbon and Lipid Microbiology Vol. 5, Part 2
Springer International Publishing, Cham, p. 3743 - 3750 10.1007/978-3-540-77587-4_293 - Kunapuli, U., Jahn, M.K., Lueders, T., Geyer, R., Heipieper, H.J., Meckenstock, R.U. (2010):
Desulfitobacterium aromaticivorans sp. nov. and Geobacter toluenoxydans sp. nov., iron-reducing bacteria capable of anaerobic degradation of monoaromatic hydrocarbons
Int. J. Syst. Evol. Microbiol. 60 (3), 686 - 695 10.1099/ijs.0.003525-0 - Löffler, C., Eberlein, C., Mäusezahl, I., Kappelmeyer, U., Heipieper, H.J. (2010):
Physiological evidence for the presence of a cis-trans isomerase of unsaturated fatty acids in Methylococcus capsulatus Bath to adapt to the presence of toxic organic compounds
FEMS Microbiol. Lett. 308 (1), 68 - 75 10.1111/j.1574-6968.2010.01993.x - Martínez-Lavanchy, P.M., Müller, C., Nijenhuis, I., Kappelmeyer, U., Buffing, M., McPherson, K., Heipieper, H.J. (2010):
High stability and fast recovery of expression of the TOL plasmid-carried toluene catabolism genes of Pseudomonas putida mt-2 under conditions of oxygen limitation and oscillation
Appl. Environ. Microb. 76 (20), 6715 - 6723 10.1128/AEM.01039-10 - van der Meer, J.R., Springael, D., de Lorenzo, V., Ramos, J.L., Smidt, H., Heipieper, H.J. (2010):
BACSIN(s): A European project focused on targeted applications of bacterial strains for pollutant bioremediation
J. Biotechnol. 150 (Suppl. 1), S44 - S45 10.1016/j.jbiotec.2010.08.123
2009 (7)
- Chrzanowski, Ł., Wick, L.Y., Meulenkamp, R., Kästner, M., Heipieper, H.J. (2009):
Rhamnolipid biosurfactants decrease the toxicity of chlorinated phenols to Pseudomonas putida DOT-T1E
Lett. Appl. Microbiol. 48 (6), 756 - 762 10.1111/j.1472-765x.2009.02611.x - de Carvalho, C.C.C.R., Wick, L.Y., Heipieper, H.J. (2009):
Cell wall adaptations of planktonic and biofilm Rhodococcus erythropolis cells to growth on C5 to C16 n -alkane hydrocarbons
Appl. Microbiol. Biotechnol. 82 (2), 311 - 320 10.1007/s00253-008-1809-3 - Kabelitz, N., Machackova, J., Imfeld, G., Brennerova, M., Pieper, D.H., Heipieper, H.J., Junca, H. (2009):
Enhancement of the microbial community biomass and diversity during air sparging bioremediation of a soil highly contaminated with kerosene and BTEX
Appl. Microbiol. Biotechnol. 82 (3), 565 - 577 10.1007/s00253-009-1868-0 - Owsianiak, M., Chrzanowski, Ł., Szulc, A., Staniewski, J., Olszanowski, A., Olejnik-Schmidt, A.K., Heipieper, H.J. (2009):
Biodegradation of diesel/biodiesel blends by a consortium of hydrocarbon degraders: Effect of the type of blend and the addition of biosurfactants
Bioresour. Technol. 100 (3), 1497 - 1500 10.1016/j.biortech.2008.08.028 - Owsianiak, M., Szulc, A., Chrzanowski, Ł., Cyplik, P., Bogacki, M., Olejnik-Schmidt, A.K., Heipieper, H.J. (2009):
Biodegradation and surfactant-mediated biodegradation of diesel fuel by 218 microbial consortia are not correlated to cell surface hydrophobicity
Appl. Microbiol. Biotechnol. 84 (3), 545 - 553 10.1007/s00253-009-2040-6 - Pepi, M., Lobianco, A., Renzi, M., Perra, G., Bernardini, E., Marvasi, M., Gasperini, S., Volterrani, M., Franchi, E., Heipieper, H.J., Focardi, S.E. (2009):
Two naphthalene degrading bacteria belonging to the genera Paenibacillus and Pseudomonas isolated from a highly polluted lagoon perform different sensitivities to the organic and heavy metal contaminants
Extremophiles 13 (5), 839 - 844 10.1007/s00792-009-0271-1 - Veeranagouda, Y., Lim, E.J., Kim, D.W., Kim, J.-K., Cho, K., Heipieper, H.J., Lee, K. (2009):
Formation of specialized aerial architectures by Rhodococcus during utilization of vaporized p-cresol
Microbiology-(UK) 155 (11), 3788 - 3796 10.1099/mic.0.029926-0
2008 (3)
- Pepi, M., Heipieper, H.J., Fischer, J., Ruta, M., Volterrani, M., Focardi, S.E. (2008):
Membrane fatty acids adaptive profile in the simultaneous presence of arsenic and toluene in Bacillus sp. ORAs2 and Pseudomonas sp. ORAs5 strains
Extremophiles 12 (3), 343 - 349 10.1007/s00792-008-0147-9 - Schoug, Å., Fischer, J., Heipieper, H.J., Schnürer, J., Håkansson, S. (2008):
Impact of fermentation pH and temperature on freeze-drying survival and membrane lipid composition of Lactobacillus coryniformis Si3
J. Ind. Microbiol. Biotechnol. 35 (3), 175 - 181 10.1007/s10295-007-0281-x - Veeranagouda, Y., Benndorf, D., Heipieper, H.J., Karegoudar, T.B. (2008):
Purification and characterization of NAD dependent n-butanol dehydrogenase from solvent tolerant n-butanol degrading Enterobacter sp VKGH12
J. Microbiol. Biotechnol. 18 (4), 663 - 669
2007 (5)
- Duldhardt, I., Nijenhuis, I., Schauer, F., Heipieper, H.J. (2007):
Anaerobically grown Thauera aromatica, Desulfococcus multivorans, Geobacter sulfurreducens are more sensitive towards organic solvents than aerobic bacteria
Appl. Microbiol. Biotechnol. 77 (3), 705 - 711 10.1007/s00253-007-1179-2 - Heipieper, H.J. (ed., 2007):
Bioremediation of soils contaminated with aromatic compounds
NATO Science Series IV: Earth and Environmental Sciences 76
Springer, Dordrecht, 130 pp. 10.1007/978-1-4020-5693-2 - Heipieper, H.J. (2007):
Bioremediation of soils contaminated with aromatic compounds. Effects of rhizosphere, bioavailability, gene regulation and stress adaptation
In: Heipieper, H.J. (ed.)
Bioremediation of soils contaminated with aromatic compounds
NATO Science Series IV: Earth and Environmental Sciences 76
Springer, Dordrecht, p. 1 - 4 10.1007/978-1-4020-5693-2_1 - Heipieper, H.J., Neumann, G., Cornelissen, S., Meinhardt, F. (2007):
Solvent-tolerant bacteria for biotransformations in two-phase fermentation systems
Appl. Microbiol. Biotechnol. 74 (5), 961 - 973 10.1007/s00253-006-0833-4 - Unell, M., Kabelitz, N., Jansson, J.K., Heipieper, H.J. (2007):
Adaptation of the psychrotroph Arthrobacter chlorophenolicus A6 to growth temperature and the presence of phenols by changes in the anteiso/iso ratio of branched fatty acids
FEMS Microbiol. Lett. 266 (2), 138 - 143 10.1111/j.1574-6968.2006.00502.x
2006 (3)
- Lange, F., Cornelissen, S., Kubac, D., Sein, M.M., von Sonntag, J., Hannich, C.B., Golloch, A., Heipieper, H.J., Möder, M., von Sonntag, C. (2006):
Degradation of macrolide antibiotics by ozone: a mechanistic case study with clarithromycin
Chemosphere 65 (1), 17 - 23 10.1016/j.chemosphere.2006.03.014 - Neumann, G., Cornelissen, S., van Breukelen, F., Hunger, S., Lippold, H., Loffhagen, N., Wick, L.Y., Heipieper, H.J. (2006):
Energetics and surface properties of Pseudomonas putida DOT-T1E in a two-phase fermentation system with 1-decanol as second phase
Appl. Environ. Microb. 72 (6), 4232 - 4238 10.1128/AEM.02904-05 - Veeranagouda, Y., Karegoudar, T.B., Neumann, G., Heipieper, H.J. (2006):
Enterobacter sp VKGH12 growing with n-butanol as the sole carbon source and cells to which the alcohol is added as pure toxin show considerable differences in their adaptive responses
FEMS Microbiol. Lett. 254 (1), 48 - 54 10.1111/j.1574-6968.2005.00017.x
2005 (6)
- de Carvalho, C.C.C.R., Parreño-Marchante, B., Neumann, G., da Fonseca, M.M.R., Heipieper, H.J. (2005):
Adaptation of Rhodococcus erythropolis DCL14 to growth on n-alkanes, alcohols and terpenes
Appl. Microbiol. Biotechnol. 67 (3), 383 - 388 10.1007/s00253-004-1750-z - Heipieper, H.J. (2005):
Letters to the editor. Adaptation of Escherichia coli to ethanol on the level of membrane fatty acid composition
Appl. Environ. Microb. 71 (6), 3388 10.1128/AEM.71.6.3388.2005 - Mutnuri, S., Vasudevan, N., Kästner, M., Heipieper, H.J. (2005):
Changes in fatty acid composition of Chromohalobacter israelensis with varying salt concentrations
Curr. Microbiol. 50 (3), 151 - 154 10.1007/s00284-004-4396-2 - Neumann, G., Kabelitz, N., Zehnsdorf, A., Miltner, A., Lippold, H., Meyer, D., Schmid, A., Heipieper, H.J. (2005):
Prediction of the adaptability of Pseudomonas putida DOT-T1E to a second phase of a solvent for economically sound two-phase biotransformations
Appl. Environ. Microb. 71 (11), 6606 - 6612 10.1128/AEM.71.11.6606-6612.2005 - Neumann, G., Veeranagouda, Y., Karegoudar, T.B., Sahin, Ö., Mäusezahl, I., Kabelitz, N., Kappelmeyer, U., Heipieper, H.J. (2005):
Cells of Pseudomonas putida and Enterobacter sp. adapt to toxic organic compounds by increasing their size
Extremophiles 9 (2), 163 - 168 10.1007/s00792-005-0431-x - Viegas, C.A., Cabral, M.G., Teixeira, M.C., Neumann, G., Heipieper, H.J., Sá-Correia, I. (2005):
Yeast adaptation to 2,4-dichlorophenoxyacetic acid involves increased membrane fatty acid saturation degree and decreased OLE1 transcription
Biochem. Biophys. Res. Commun. 330 (1), 271 - 278 10.1016/j.bbrc.2005.02.158
2004 (3)
- Heipieper, H.J., Neumann, G., Kabelitz, N., Kästner, M., Richnow, H.H. (2004):
Carbon isotope fractionation during cis-trans isomerization of unsaturated fatty acids in Pseudomonas putida
Appl. Microbiol. Biotechnol. 66 (3), 285 - 290 10.1007/s00253-004-1734-z - Neumann, G., Teras, R., Monson, L., Kivisaar, M., Schauer, F., Heipieper, H.J. (2004):
Simultaneous degradation of atrazine and phenol by Pseudomonas sp. strain ADP: effects of toxicity and adaptation
Appl. Environ. Microb. 70 (4), 1907 - 1912 10.1128/aem.70.4.1907-1912.2004 - Tamburro, A., Robuffo, I., Heipieper, H.J., Allocati, N., Rotilio, D., Di Ilio, C., Favaloro, B. (2004):
Expression of glutathione S-transferase and peptide methionine sulphoxide reductase in Ochrobactrum anthropi is correlated to the production of reactive oxygen species caused by aromatic substrates
FEMS Microbiol. Lett. 241 (2), 151 - 156 10.1016/j.femsle.2004.10.013
2003 (4)
- Heipieper, H.J., Meinhardt, F., Segura, A. (2003):
The cis-trans isomerase of unsaturated fatty acids in Pseudomonas and Vibrio: biochemistry, molecular biology and physiological function of a unique stress adaptive mechanism
FEMS Microbiol. Lett. 229 (1), 1 - 7 10.1016/S0378-1097(03)00792-4 - Kabelitz, N., Santos, P.M., Heipieper, H.J. (2003):
Effect of aliphatic alcohols on growth and degree of saturation of membrane lipids in Acinetobacter calcoceticus
FEMS Microbiol. Lett. 220 (2), 223 - 227 10.1016/S0378-1097(03)00103-4 - Neumann, G., Kabelitz, N., Heipieper, H.J. (2003):
The regulation of the cis-trans isomerase of unsaturated fatty acids in Pseudomonas putida: correlation between cti activity and K+-uptake systems
Eur. J. Lipid Sci. Technol. 105 (10), 585 - 589 10.1002/ejlt.200300803 - von Wallbrunn, A., Richnow, H.H., Neumann, G., Meinhardt, F., Heipieper, H.J. (2003):
Mechanism of cis-trans isomerization of unsaturated fatty acids in Pseudomonas putida
J. Bacteriol. 185 (5), 1730 - 1733 10.1128/JB.185.5.1730-1733.2003
2002 (3)
- Isken, S., Heipieper, H.J. (2002):
Toxicity of organic solvents to microorganisms
In: Bitton, G. (ed.)
Encyclopedia of environmental microbiology. Vol. 6
Wiley, New York, p. 3147 - 3155 - Santos, P.M., Mignogna, G., Heipieper, H.J., Zennaro, E. (2002):
Occurrence and properties of glutathione S-transerases in phenol-degrading Pseudomonas strains
Res. Microbiol. 153 , 89 - 98 10.1016/S0923-2508(01)01293-1 - von Wallbrunn, A., Heipieper, H.J., Meinhardt, F. (2002):
Cis/trans isomerisation of unsaturated fatty acids in a cardiolipin synthese knock-out mutant of Pseudomonas putida P8
Appl. Microbiol. Biotechnol. 60 (1-2), 179 - 185 10.1007/s00253-002-1080-y
2001 (3)
- Hage, A., Wever, R., Schoemaker, H.E., Zennaro, E., Heipieper, H.J. (2001):
Determination of the toxicity of several aromatic carbonylic compounds and their reduced derivatives on Phanerochaete chrysosporium using a Pseudomonas putida test system
Biotechnol. Bioeng. 73 , 69 - 73 10.1002/1097-0290(20010405)73:1<69::AID-BIT1037>3.0.CO;2-W - Heipieper, H.J., de Waard, P., van der Meer, P., Killian, J.A., Isken, S., de Bont, J.A.M., Eggink, G., de Wolf, F.A. (2001):
Regiospecific effect of 1-octanol on cis-trans isomerisation of unsaturated fatty acids in the solvent-tolerant strain Pseudomonas putida S12
Appl. Microbiol. Biotechnol. 57 (4), 541 - 547 10.1007/s002530100808 - Heipieper, H.J., Isken, S., Saliola, M. (2001):
Ethanol tolerance and membrane fatty acid adaptation in adh multiple and null mutants of Kluyveromyces lactis
Res. Microbiol. 151 (9), 777 - 784 10.1016/S0923-2508(00)01143-8
2000 (3)
- Favaloro, B., Tamburro, A., Trofino, M.A., Bologna, L., Rotilio, D., Heipieper, H.J. (2000):
Modulation of the glutathione S-transferase in Ochrobactrum anthropi: function of xenobiotic substrates and other forms of stress
Biochem. J. 346 , 553 - 559 10.1042/bj3460553 - Heipieper, H.J. (2000):
Mechanism of bacterial adaptation to several forms of stress and their possible function in bioremediation. Biotechnology for environmental applications
Sectoral Meeting for EC Project Contractors "Biotechnology for environmental applications", Roskilde, 14-16 June 2000 - Book of Abstracts
T12 - Heipieper, H.J., Stottmeister, U. (2000):
Strategies to accelerate the productive biodegradation of several herbicides under environmental stress conditions (EU-Project: HERBICBIOREM)
World congress "Biotechnology 2000" - 11th International Biotechnology Symposium, Berlin, 3-8 September 2000 - Book of Abstracts
3
467 - 468
1999 (1)
- Favaloro, B., Tamburro, A., Trofino, M.A., Rotilio, D., Heipieper, H.J. (1999):
Modulation of the glutathione S-transferase (GST) in Ochrobactrum anthropi: function of xenobiotic substrates and other forms of stress
Annual Congress of the FISV - Federazione Italiana Scienze della Vita,Riva del Garda, Italy, 2.-6.10.1999
1 - 125