Software

INDICATE

Indicate Logo

Indicate is a web application for assessing the effects of stress on ecosystems. It includes tools such as bioindicators and models for analysing environmental data.

tfp-browser

ftb browser

The toxicogenomic fingerprint browser (tfp-browser) in an R Shiny based tool for the exploration and visualization of whole transcriptome toxicogenomic data obtained with the zebrafish embryo model for more than 70 chemicals.

INTOB

Integrated Effect Database for Toxicological Observations

INTOB is a software for the data collection of toxicological observations and metadata according to the FAIR principles ("findable, accessible, interoperable, and reusable"). The web-based INTOB software solution enables the management of observation-based toxicity data, common metadata collection standards and data protection guidelines via a dedicated user management domain.

FishInspector

FishInspector
The FishInspector software allows the user-friendly and easy annotation of features in zebrafish embryo 2-dimensional images. Features are detected automatically using deep learning models but may require correction by the user.