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Title (Primary) Using proteins to study how microbes contribute to soil ecosystem services: The current state and future perspectives of soil metaproteomics
Author Starke, R.; Jehmlich, N.; Bastida, F.;
Journal Journal of Proteomics
Year 2019
Department MOLSYB;
Volume 198
Language englisch;
POF III (all) T41;
Keywords Soil; Metaproteomics; Ecosystem services; Microbial; Communities; Structure; Function
Abstract Metaproteomics was established to analyse both the structure and the function of microbial communities and, particularly in soils, their contribution to ecosystem services. In this review, we provide an overview on how the study of the soil metaproteome can provide fundamental information on the role of microbial communities in soil ecosystem services. We further discuss the strengths and weaknesses of soil metaproteomics in comparison to other culture-independent OMIC techniques. We critically review its bottlenecks but also provide strategies to mitigate and possible directions for future research as the direct link of structure and function is advantageous and complementary to metagenomics, metatranscriptomics and metametabolomics.
ID 21121
Persistent UFZ Identifier http://www.ufz.de/index.php?en=20939&ufzPublicationIdentifier=21121
Starke, R., Jehmlich, N., Bastida, F. (2019):
Using proteins to study how microbes contribute to soil ecosystem services: The current state and future perspectives of soil metaproteomics
J. Proteomics 198 , 50 - 58