Publication Details

Category Text Publication
Reference Category Journals
DOI 10.1128/aem.01262-24
Licence creative commons licence
Title (Primary) Nitrous oxide is the main product during nitrate reduction by a novel lithoautotrophic iron(II)-oxidizing culture from an organic-rich paddy soil
Author Grimm, H.; Lorenz, J.; Straub, D.; Joshi, P.; Shuster, J.; Zarfl, C.; Muehe, E.M.; Kappler, A.
Source Titel Applied and Environmental Microbiology
Year 2025
Department AME
Volume 91
Issue 1
Page From e01262-24
Language englisch
Topic T7 Bioeconomy
Data and Software links https://doi.org/10.5281/zenodo.13683983
Keywords culture HP; airborne microorganisms; greenhouse gas; arsenic; chemodenitrification; nitrogen, soil
Abstract Microbial nitrate reduction coupled to iron(II) oxidation (NRFeOx) occurs in paddy soils due to high levels of dissolved iron(II) and regular application of nitrogen fertilizer. However, to date, there is no lithoautotrophic NRFeOx isolate or enrichment culture available from this soil environment. Thus, resulting impacts on greenhouse gas emissions during nitrate reduction (i.e., nitrous oxide [N2O]) and on toxic metalloid (i.e., arsenic) mobility can hardly be investigated. We enriched a lithoautotrophic NRFeOx culture, culture HP (Huilongpu paddy, named after its origin), from a paddy soil (Huilongpu Town, China), which was dominated by Gallionella (71%). The culture reduced 0.45 to 0.63 mM nitrate and oxidized 1.76 to 2.31 mM iron(II) within 4 days leading to N2O as the main N-product (62%–88% N2O-N of total reduced NO3-N). Nitrite was present as an intermediate at a maximum of 0.16 ± 0.1 mM. Cells were associated with, but mostly not encrusted by, poorly crystalline iron(III) minerals (ferrihydrite). Culture HP performed best below an iron(II) threshold of 2.5–3.5 mM and in a pH range of 6.50–7.05. In the presence of 100 µM arsenite, only 0%–18% of iron(II) was oxidized. Due to low iron(II) oxidation, arsenite was not immobilized. However, the proportion of N2O-N of total reduced NO3-N decreased from 77% to 30%. Our results indicate that lithoautotrophic NRFeOx occurs even in organic-rich paddy soils, resulting in denitrification and subsequent N2O emissions. The obtained novel enrichment culture allows us to study the impact of lithoautotrophic NRFeOx on arsenic mobility and N2O emissions in paddy soils.
Persistent UFZ Identifier https://www.ufz.de/index.php?en=20939&ufzPublicationIdentifier=31774
Grimm, H., Lorenz, J., Straub, D., Joshi, P., Shuster, J., Zarfl, C., Muehe, E.M., Kappler, A. (2025):
Nitrous oxide is the main product during nitrate reduction by a novel lithoautotrophic iron(II)-oxidizing culture from an organic-rich paddy soil
Appl. Environ. Microb. 91 (1), e01262-24 10.1128/aem.01262-24