Publication Details

Category Text Publication
Reference Category Journals
DOI 10.1002/jemt.70064
Licence creative commons licence
Title (Primary) Biofilm analysis by confocal microscopy – basics and practical aspects
Author Neu, T.R.; Kuhlicke, U.
Source Titel Microscopy Research and Technique
Year 2025
Department FLOEK
Language englisch
Topic T5 Future Landscapes
Supplements https://analyticalsciencejournals.onlinelibrary.wiley.com/action/downloadSupplement?doi=10.1002%2Fjemt.70064&file=jemt70064-sup-0001-TableS1-S10.xlsx
Keywords applied aspects; bio-aggregate; biofilm; CLSM; confocal; fluorescence staining; sample mounting
Abstract This review is intended as a guideline for beginners in confocal laser scanning microscopy. It combines basic theoretical concepts, such as fluorescence principles, resolution limits, and imaging parameters with practical guidance on sample preparation, staining strategies, and data acquisition using confocal microscopy. The aim is to combine technical and methodological aspects in order to provide a comprehensive and accessible introduction. The main application is in microbiology, with a focus on biofilms and bio-aggregates; although other researchers in biology may benefit from this survey. In this primer, we compiled 25 years of experience with confocal microscopy, four generations of instruments, diverse national and international projects, and many different samples of PhD students, PostDocs, and senior scientists from various countries.
Persistent UFZ Identifier https://www.ufz.de/index.php?en=20939&ufzPublicationIdentifier=31208
Neu, T.R., Kuhlicke, U. (2025):
Biofilm analysis by confocal microscopy – basics and practical aspects
Microsc. Res. Tech. 10.1002/jemt.70064