Publication Details

Category Text Publication
Reference Category Journals
DOI 10.1093/nar/gkac247
Licence creative commons licence
Title (Primary) The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
Author Ostrovsky, A.E.; Mahmoud, A.; Lonie, A.; Syme, A.; Fouilloux, A.; Bretaudeau, A.; Nekrutenko, A.; Kumar, A.; Eschenlauer, A.C.; DeSanto, A.D.; Guerler, A.; Serrano-Solano, B.; Batut, B.; GrĂ¼ning, B.A.; Langhorst, B.W.; Carr, B.; Blankenberg, D.; Goecks, J.; Bernt, M. ORCID logo ; Schatz, M.C., The Galaxy Community
Journal Nucleic Acids Research
Year 2022
Department BIOINF
Volume 50
Issue W1
Page From W345
Page To W351
Language englisch
Topic T9 Healthy Planet
Abstract Galaxy is a mature, browser accessible workbench for scientific computing. It enables scientists to share, analyze and visualize their own data, with minimal technical impediments. A thriving global community continues to use, maintain and contribute to the project, with support from multiple national infrastructure providers that enable freely accessible analysis and training services. The Galaxy Training Network supports free, self-directed, virtual training with >230 integrated tutorials. Project engagement metrics have continued to grow over the last 2 years, including source code contributions, publications, software packages wrapped as tools, registered users and their daily analysis jobs, and new independent specialized servers. Key Galaxy technical developments include an improved user interface for launching large-scale analyses with many files, interactive tools for exploratory data analysis, and a complete suite of machine learning tools. Important scientific developments enabled by Galaxy include Vertebrate Genome Project (VGP) assembly workflows and global SARS-CoV-2 collaborations.
Persistent UFZ Identifier
Ostrovsky, A.E., Mahmoud, A., Lonie, A., Syme, A., Fouilloux, A., Bretaudeau, A., Nekrutenko, A., Kumar, A., Eschenlauer, A.C., DeSanto, A.D., Guerler, A., Serrano-Solano, B., Batut, B., GrĂ¼ning, B.A., Langhorst, B.W., Carr, B., Blankenberg, D., Goecks, J., Bernt, M., Schatz, M.C., The Galaxy Community (2022):
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update
Nucleic Acids Res. 50 (W1), W345 - W351