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24941 Breitkreuz, C., Heintz-Buschart, A., Buscot, F., Wahdan, S.F.M., Tarkka, M., Reitz, T. (2021):
Can we estimate functionality of soil microbial communities from structure-derived predictions? A reality test in agricultural soils
Microbiol. Spectr. 9 (1), e00278-21
full text (doi)
24762 Bueno de Mesquita, C.P., Nichols, L.M., Gebert, M.J., Vanderburgh, C., Bocksberger, G., Lester, J.D., Kalan, A.K., Dieguez, P., McCarthy, M.S., Agbor, A., Álvarez Varona, P., Ayimisin, A.E., Bessone, M., Chancellor, R., Cohen, H., Coupland, C., Deschner, T., Egbe, V.E., Goedmakers, A., Granjon, A.-C., Grueter, C.C., Head, J., Hernandez-Aguilar, R.A., Jeffery, K.J., Jones, S., Kadam, P., Kaiser, M., Lapuente, J., Larson, B., Marrocoli, S., Morgan, D., Mugerwa, B., Mulindahabi, F., Neil, E., Niyigaba, P., Piel, A.K., Robbins, M.M., Rundus, A., Sanz, C.M., Sciaky, L., Sheil, D., Sommer, V., Stewart, F.A., Ton, E., van Schijndel, J., Vergnes, V., Wessling, E.G., Wittig, R.M., Ginath Yuh, Y., Yurkiw, K., Zuberbühler, K., Gogarten, J.F., Heintz-Buschart, A., Muellner-Riehl, A.N., Boesch, C., Kühl, H.S., Fierer, N., Arandjelovic, M., Dunn, R.R. (2021):
Structure of chimpanzee gut microbiomes across tropical africa
mSystems 6 (3), e01269-20
full text (doi)
24451 Busi, S.B., de Nies, L., Habier, J., Wampach, L., Fritz, J.V., Heintz-Buschart, A., May, P., Halder, R., de Beaufort, C., Wilmes, P. (2021):
Persistence of birth mode-dependent effects on gut microbiome composition, immune system stimulation and antimicrobial resistance during the first year of life
ISME Commun. 1 , art. 8
full text (doi)
24761 Chakaroun, R.M., Massier, L., Heintz-Buschart, A., Said, N., Fallmann, J., Crane, A., Schütz, T., Dietrich, A., Blüher, M., Stumvoll, M., Musat, N., Kovacs, P. (2021):
Circulating bacterial signature is linked to metabolic disease and shifts with metabolic alleviation after bariatric surgery
Genome Med. 13 , art. 105
full text (doi)
23469 Cui, S., Li, M., Hassan, R.Y.A., Heintz-Buschart, A., Wang, J., Bilitewski, U. (2020):
Inhibition of respiration of Candida albicans by small molecules increases phagocytosis efficacy by macrophages
mSphere 5 , e00016-20
full text (doi)
24268 de Nies, L., Lopes, S., Busi, S.B., Galata, V., Heintz-Buschart, A., Laczny, C.C., May, P., Wilmes, P. (2021):
PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data
Microbiome 9 , art. 49
full text (doi)
22267 Eisenhauer, N., Bonkowski, M., Brose, U., Buscot, F., Durka, W., Ebeling, A., Fischer, M., Gleixner, G., Heintz-Buschart, A., Hines, J., Jesch, A., Lange, M., Meyer, S., Roscher, C., Scheu, S., Schielzeth, H., Schloter, M., Schulz, S., Unsicker, S., van Dam, N.M., Weigelt, A., Weisser, W.W., Wirth, C., Wolf, J., Schmid, B. (2019):
Biotic interactions, community assembly, and ecoevolutionary dynamics as drivers of long-term biodiversity–ecosystem functioning relationships
Research Ideas and Outcomes 5 , e47042
full text (doi)
23879 Eisenhauer, N., Buscot, F., Heintz-Buschart, A., Jurburg, S.D., Küsel, K., Sikorski, J., Vogel, H.-J., Guerra, C.A. (2021):
The multidimensionality of soil macroecology
Glob. Ecol. Biogeogr. 30 (1), 4 - 10
full text (doi)
25040 Ferlian, O., Goldmann, K., Eisenhauer, N., Tarkka, M.T., Buscot, F., Heintz-Buschart, A. (2021):
Distinct effects of host and neighbour tree identity on arbuscular and ectomycorrhizal fungi along a tree diversity gradient
ISME Commun. 1 , art. 40
full text (doi)
23880 Fischer, F., Romero, R., Hellhund, A., Linne, U., Bertrams, W., Pinkenburg, O., Eldin, H.S., Binder, K., Jacob, R., Walker, A., Stecher, B., Basic, M., Luu, M., Mahdavi, R., Heintz-Buschart, A., Visekruna, A., Steinhoff, U. (2020):
Dietary cellulose induces anti-inflammatory immunity and transcriptional programs via maturation of the intestinal microbiota
Gut Microbes 12 (1), e1829962
full text (doi)
23238 Ganther, M., Bouffaud, M.-L., Gebauer, L., Buscot, F., Vetterlein, D., Heintz-Buschart, A., Tarkka, M. (2020):
Spatial sampling approach to unravel the impact of soil texture and root genotype on maize root gene expression profiles
EGU General Assembly, EGU2020, Vienna, Austria, 4-8 May 2020
Copernicus Publications, p. EGU2020-9707
full text (url)
24425 Ganther, M., Vetterlein, D., Heintz-Buschart, A., Tarkka, M.T. (2021):
Transcriptome sequencing analysis of maize roots reveals the effects of substrate and root hair formation in a spatial context
Plant Soil
full text (doi)
23237 Ganther, M., Yim, B., Ibrahim, Z., Bienert, M.D., Lippold, E., Maccario, L., Sørensen, S.J., Bienert, G.P., Vetterlein, D., Heintz-Buschart, A., Blagodatskaya, E., Smalla, K., Tarkka, M.T. (2020):
Compatibility of X-ray computed tomography with plant gene expression profiling, rhizosphere bacterial community composition and enzyme activity analyses
J. Exp. Bot. 71 (18), 5603 - 5614
full text (doi)
23752 Gebauer, L., Bouffaud, M.-L., Ganther, M., Yim, B., Vetterlein, D., Smalla, K., Buscot, F., Heintz-Buschart, A., Tarkka, M. (2021):
Soil texture, sampling depth and root hairs shape the structure of ACC deaminase bacterial community composition in maize rhizosphere
Front. Microbiol. 12 , art. 616828
full text (doi)
21976 Goldmann, K., Boeddinghaus, R.S., Klemmer, S., Regan, K.M., Heintz-Buschart, A., Fischer, M., Prati, D., Piepho, H.-P., Berner, D., Marhan, S., Kandeler, E., Buscot, F., Wubet, T. (2020):
Unraveling spatiotemporal variability of arbuscular mycorrhizal fungi in a temperate grassland plot
Environ. Microbiol. 22 (3), 873 - 888
full text (doi)
23479 Guerra, C.A., Heintz-Buschart, A., Sikorski, J., Chatzinotas, A., Guerrero-Ramírez, N., Cesarz, S., Beaumelle, L., Rillig, M.C., Maestre, F.T., Delgado-Baquerizo, M., Buscot, F., Overmann, J., Patoine, G., Phillips, H.R.P., Winter, M., Wubet, T., Küsel, K., Bardgett, R.D., Cameron, E.K., Cowan, D., Grebenc, T., Marín, C., Orgiazzi, A., Singh, B.K., Wall, D.H., Eisenhauer, N. (2020):
Blind spots in global soil biodiversity and ecosystem function research
Nat. Commun. 11 (1), art. 3870
full text (doi)
21384 Habier, J., May, P., Heintz-Buschart, A., Ghosal, A., Wienecke-Baldacchino, A.K., Nolte-‘t Hoen, E.N.M., Wilmes, P., Fritz, J.V. (2018):
Extraction and analysis of RNA isolated from pure bacteria-derived outer membrane vesicle
In: Arluison, V., Valverde, C. (eds.)
Bacterial regulatory RNA : methods and protocols
Methods in Molecular Biology 1737
Humana Press, p. 213 - 230
full text (doi)
23001 Heintz-Buschart, A., Guerra, C., Djukic, I., Cesarz, S., Chatzinotas, A., Patoine, G., Sikorski, J., Buscot, F., Küsel, K., Wegner, C.-E., Eisenhauer, N. (2020):
Microbial diversity-ecosystem function relationships across environmental gradients
Research Ideas and Outcomes 6 , e52217
full text (doi)
19664 Heintz-Buschart, A., Wilmes, P. (2018):
Human gut microbiome: function matters
Trends Microbiol. 26 (7), 563 - 574
full text (doi)
20286 Heintz-Buschart, A., Yusuf, D., Kaysen, A., Etheridge, A., Fritz, J.V., May, P., de Beaufort, C., Upadhyaya, B.B., Ghosal, A., Galas, D.J., Wilmes, P. (2018):
Small RNA profiling of low biomass samples: identification and removal of contaminants
BMC Biol. 16 , art. 52
full text (doi)
23733 Herold, M., Martínez Arbas, S., Narayanasamy, S., Sheik, A.R., Kleine-Borgmann, L.A.K., Lebrun, L.A., Kunath, B.J., Roume, H., Bessarab, I., Williams, R.B.H., Gillece, J.D., Schupp, J.M., Keim, P.S., Jäger, C., Hoopmann, M.R., Moritz, R.L., Ye, Y., Li, S., Tang, H., Heintz-Buschart, A., May, P., Muller, E.E.L., Laczny, C.C., Wilmes, P. (2020):
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
Nat. Commun. 11 , art. 5281
full text (doi)
22237 Hickl, O., Heintz-Buschart, A., Trautwein-Schult, A., Hercog, R., Bork, P., Wilmes, P., Becher, D. (2019):
Sample preservation and storage significantly impact taxonomic and functional profiles in metaproteomics studies of the human gut microbiome
Microorganisms 7 (9), art. 367
full text (doi)
23578 Jurburg, S.D., Konzack, M., Eisenhauer, N., Heintz-Buschart, A. (2020):
The archives are half-empty: an assessment of the availability of microbial community sequencing data
Commun. Biol. 3 , art. 474
full text (doi)
20331 Laloo, A.E., Wei, J., Wang, D., Narayanasamy, S., Vanwonterghem, I., Waite, D., Steen, J., Kaysen, A., Heintz-Buschart, A., Wang, Q., Schulz, B., Nouwens, A., Wilmes, P., Hugenholtz, P., Yuan, Z., Bond, P.L. (2018):
Mechanisms of persistence of the ammonia-oxidizing bacteria Nitrosomonas to the biocide free nitrous acid
Environ. Sci. Technol. 52 (9), 5386 - 5397
full text (doi)
20840 Malabirade, A., Habier, J., Heintz-Buschart, A., May, P., Godet, J., Halder, R., Etheridge, A., Galas, D., Wilmes, P., Fritz, J.V. (2018):
The RNA complement of outer membrane vesicles from Salmonella enterica serovar Typhimurium under distinct culture conditions
Front. Microbiol. 9 , art. 2015
full text (doi)
24220 Marselle, M.R., Hartig, T., Cox, D.T.C., de Bell, S., Knapp, S., Lindley, S., Triguero-Mas, M., Böhning-Gaese, K., Braubach, M., Cook, P.A., de Vries, S., Heintz-Buschart, A., Hofmann, M., Irvine, K.N., Kabisch, N., Kolek, F., Kraemer, R., Markevych, I., Martens, D., Müller, R., Nieuwenhuijsen, M., Potts, J.M., Stadler, J., Walton, S., Warber, S.L., Bonn, A. (2021):
Pathways linking biodiversity to human health: A conceptual framework
Environ. Int. 150 , art. 106420
full text (doi)
24124 Moll, J., Heintz-Buschart, A., Bässler, C., Hofrichter, M., Kellner, H., Buscot, F., Hoppe, B. (2021):
Amplicon sequencing-based bipartite network analysis confirms a high degree of specialization and modularity for fungi and prokaryotes in deadwood
mSphere 6 (1), e00856-20
full text (doi)
22641 Peters, A., Krumbholz, P., Jäger, E., Heintz-Buschart, A., Çakir, M.V., Rothemund, S., Gaudl, A., Ceglarek, U., Schöneberg, T., Stäubert, C. (2019):
Correction: Metabolites of lactic acid bacteria present in fermented foods are highly potent agonists of human hydroxycarboxylic acid receptor 3
PLoS Genet. 15 (7), e1008283
full text (doi)
21882 Peters, A., Krumbholz, P., Jäger, E., Heintz-Buschart, A., Çakir, M.V., Rothemund, S., Gaudl, A., Ceglarek, U., Schöneberg, T., Stäubert, C. (2019):
Metabolites of lactic acid bacteria present in fermented foods are highly potent agonists of human hydroxycarboxylic acid receptor 3
PLoS Genet. 15 (5), e1008145
full text (doi)
22751 Phillips, H.R.P., Heintz-Buschart, A., Eisenhauer, N. (2020):
Putting soil invertebrate diversity on the map
Mol. Ecol. 29 (4), 655 - 657
full text (doi)
23937 Prada-Salcedo, L.D., Goldmann, K., Heintz-Buschart, A., Reitz, T., Wambsganss, J., Bauhus, J., Buscot, F. (2021):
Fungal guilds and soil functionality respond to tree community traits rather than to tree diversity in European forests
Mol. Ecol. 30 (2), 572 - 591
full text (doi)
25097 Purahong, W., Wahdan, S.F.M., Heinz, D., Jariyavidyanont, K., Sungkapreecha, C., Tanunchai, B., Sansupa, C., Sadubsarn, D., Alaneed, R., Heintz-Buschart, A., Schädler, M., Geissler, A., Kressler, J., Buscot, F. (2021):
Back to the future: Decomposability of a biobased and biodegradable plastic in field soil environments and its microbiome under ambient and future climates
Environ. Sci. Technol.
full text (doi)
22111 Schleuss, P.-M., Widdig, M., Heintz-Buschart, A., Guhr, A., Martin, S., Kirkman, K., Spohn, M. (2019):
Stoichiometric controls of soil carbon and nitrogen cycling after long-term nitrogen and phosphorus addition in a mesic grassland in South Africa
Soil Biol. Biochem. 135 , 294 - 303
full text (doi)
22810 Schleuss, P.-M., Widdig, M., Heintz-Buschart, A., Kirkman, K., Spohn, M. (2020):
Interactions of nitrogen and phosphorus cycling promote P acquisition and explain synergistic plant growth responses
Ecology 101 (5), e03003
full text (doi)
21709 Schmidt, T.S.B., Hayward, M.R., Coelho, L.P., Li, S.S., Costea, P.I., Voigt, A.Y., Wirbel, J., Maistrenko, O.M., Alves, R.J.C., Bergsten, E., de Beaufort, C., Sobhani, I., Heintz-Buschart, A., Sunagawa, S., Zeller, G., Wilmes, P., Bork, P. (2019):
Extensive transmission of microbes along the gastrointestinal tract
eLife 8 , e42693
full text (doi)
25053 Smith, L.C., Orgiazzi, A., Eisenhauer, N., Cesarz, S., Lochner, A., Jones, A., Bastida, F., Patoine, G., Reitz, T., Buscot, F., Rillig, M.C., Heintz-Buschart, A., Lehmann, A., Guerra, C.A. (2021):
Large-scale drivers of relationships between soil microbial properties and organic carbon across Europe
Glob. Ecol. Biogeogr.
full text (doi)
23378 Wahdan, S.F.M., Heintz-Buschart, A., Sansupa, C., Tanunchai, B., Wu, Y.-T., Schädler, M., Noll, M., Purahong, W., Buscot, F. (2021):
Targeting the active rhizosphere microbiome of Trifolium pratense in grassland evidences a stronger-than-expected belowground biodiversity-ecosystem functioning link
Front. Microbiol. 12 , art. 629169
full text (doi)
24444 Wahdan, S.F.M., Reitz, T., Heintz-Buschart, A., Schädler, M., Roscher, C., Breitkreuz, C., Schnabel, B., Purahong, W., Buscot, F. (2021):
Organic agricultural practice enhances arbuscular mycorrhizal symbiosis in correspondence to soil warming and altered precipitation patterns
Environ. Microbiol.
full text (doi)
21174 Wampach, L., Heintz-Buschart, A., Fritz, J.V., Ramiro-Garcia, J., Habier, J., Herold, M., Narayanasamy, S., Kaysen, A., Hogan, A.H., Bindl, L., Bottu, J., Halder, S., Sjöqvist, C., May, P., Andersson, A.F., de Beaufort, C., Wilmes, P. (2018):
Birth mode is associated with earliest strain-conferred gut microbiome functions and immunostimulatory potential
Nat. Commun. 9 , art. 5091
full text (doi)
22410 Weißbecker, C., Heintz-Buschart, A., Bruelheide, H., Buscot, F., Wubet, T. (2019):
Linking soil fungal generality to tree richness in young subtropical Chinese forests
Microorganisms 7 (11), art. 547
full text (doi)
23965 Weißbecker, C., Schnabel, B., Heintz-Buschart, A. (2020):
Dadasnake, a Snakemake implementation of DADA2 to process amplicon sequencing data for microbial ecology
GigaScience 9 (12), giaa135
full text (doi)
23732 Widdig, M., Heintz-Buschart, A., Schleuss, P.-M., Guhr, A., Borer, E.T., Seabloom, E.W., Spohn, M. (2020):
Effects of nitrogen and phosphorus addition on microbial community composition and element cycling in a grassland soil
Soil Biol. Biochem. 151 , art. 108041
full text (doi)
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