Details zur Publikation
Kategorie Textpublikation
Referenztyp Zeitschriften
DOI 10.1111/2041-210X.13629
Lizenz creative commons licence
Titel (primär) bRacatus: A method to estimate the accuracy and biogeographical status of georeferenced biological data
Autor Arlé, E.; Zizka, A.; Keil, P.; Winter, M.; Essl, F.; Knight, T.; Weigelt, P.; Jiménez-Muñoz, M.; Meyer, C.
Quelle Methods in Ecology and Evolution
Erscheinungsjahr 2021
Department BZF
Band/Volume 12
Heft 9
Seite von 1609
Seite bis 1619
Sprache englisch
Topic T5 Future Landscapes
Daten-/Softwarelinks https://doi.org/10.5281/zenodo.4698910
Supplements https://besjournals.onlinelibrary.wiley.com/action/downloadSupplement?doi=10.1111%2F2041-210X.13629&file=mee313629-sup-0001-Supinfo.docx
Keywords checklists; data quality; data uncertainty; GBIF; invasion biology; range maps; vegetation plot data
Abstract
  1. Georeferenced biological data of species distributions, abundances or traits are critical for ecological and evolutionary research. However, the accuracy (true vs. false records) and biogeographical status (native vs. alien) of individual georeferenced records are often unclear, which limits their use in species distribution modelling, analyses of biodiversity change and other applications.
  2. Here, we introduced bRacatus, a new method and R package to estimate a given georeferenced record's probability of being true or false and of corresponding to a native or an alien occurrence. Our framework avoided artificial thresholds of data filtering and instead implemented a probabilistic framework which allowed propagating uncertainties in subsequent analyses. We trained and tested our method on 400 terrestrial species of amphibians, birds, terrestrial mammals and vascular plants from four continents.
  3. bRacatus showed good predictive power (mean AUC higher than 0.9; mean RMSE lower than 0.3) for both the accuracy and biogeographical status. Model performance was similar among continents, range sizes and taxa not used in the training. Tests were robust using either range maps or regional checklists of differing levels of data completeness as reference regions.
  4. bRacatus was implemented as a user-friendly R package that enabled researchers to assess the accuracy and biogeographical status of species occurrences, population abundances, community composition or any other type of georeferenced biodiversity records. We proposed this method as a routine step in addressing the inherent uncertainty of point observations to promote more accurate ecological inference and predictions.
dauerhafte UFZ-Verlinkung https://www.ufz.de/index.php?en=20939&ufzPublicationIdentifier=24726
Arlé, E., Zizka, A., Keil, P., Winter, M., Essl, F., Knight, T., Weigelt, P., Jiménez-Muñoz, M., Meyer, C. (2021):
bRacatus: A method to estimate the accuracy and biogeographical status of georeferenced biological data
Methods Ecol. Evol. 12 (9), 1609 - 1619 10.1111/2041-210X.13629