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ID Publikation
9745 Altenburger, R., Berns, A.E., Bittens, M., Brack, W., Burauel, P., Centler, F., Daus, B., Goss, K.-U., Harms, H., Kopinke, F.-D., Kühnel, D., Liess, M., Mackenzie, K., Miltner, A., Thullner, M., Wennrich, R., Wick, L.Y. (2010):
Chemicals in the environment (CITE). Report of the First Annual Conference of the Helmholtz research topic CITE
UWSF 22 (4), 502 - 506
Volltext (DOI)
17188 Alvarez-Zaldívar, P., Centler, F., Maier, U., Thullner, M., Imfeld, G. (2016):
Biogeochemical modelling of in situ biodegradation and stable isotope fractionation of intermediate chloroethenes in a horizontal subsurface flow wetland
Ecol. Eng. 90 , 170 - 179
Volltext (DOI)
18095 Berthold, T., Centler, F., Hübschmann, T., Remer, R., Thullner, M., Harms, H., Wick, L.Y. (2016):
Mycelia as a focal point for horizontal gene transfer among soil bacteria
Sci. Rep. 6 , art. 36390
Volltext (DOI)
22676 Calabrese, F., Voloshynovska, I., Musat, F., Thullner, M., Schlömann, M., Richnow, H.H., Lambrecht, J., Müller, S., Wick, L.Y., Musat, N., Stryhanyuk, H. (2019):
Quantitation and comparison of phenotypic heterogeneity among single cells of monoclonal microbial populations
Front. Microbiol. 10 , art. 2814
Volltext (DOI)
112 Centler, F., Fetzer, I., Thullner, M. (2009):
Modelling bacterial metapopulations
8th German Workshop on Artifical Life - GWAL-8, Leipzig, 3.7.-1.8.2008
p. 73 - 77
11419 Centler, F., Fetzer, I., Thullner, M. (2011):
Modeling population patterns of chemotactic bacteria in homogenous porous media
J. Theor. Biol. 287 , 82 - 91
Volltext (DOI)
13896 Centler, F., Heße, F., Thullner, M. (2013):
Estimating pathway-specific contributions to biodegradation in aquifers based on dual isotope analysis: theoretical analysis and reactive transport simulations
J. Contam. Hydrol. 152 , 97 - 116
Volltext (DOI)
9858 Centler, F., Shao, H., De Biase, C., Park, C.-H., Regnier, P., Kolditz, O., Thullner, M. (2010):
GeoSysBRNS-A flexible multidimensional reactive transport model for simulating biogeochemical subsurface processes
Comput. Geosci. 36 (3), 397 - 405
Volltext (DOI)
15774 Centler, F., Thullner, M. (2015):
Chemotactic preferences govern competition and pattern formation in simulated two-strain microbial communities
Front. Microbiol. 6 , art. 40
Volltext (DOI)
3265 Dathe, A., Thullner, M. (2005):
The relationship between fractal properties of solid matrix and pore space in porous media
Geoderma 129 (3-4), 279 - 290
Volltext (DOI)
14130 De Biase, C., Carminati, A., Oswald, S.E., Thullner, M. (2013):
Numerical modeling analysis of VOC removal processes in different aerobic vertical flow systems for groundwater remediation
J. Contam. Hydrol. 154 , 53 - 69
Volltext (DOI)
11886 De Biase, C., Maier, U., Baeder-Bederski, O., Bayer, P., Oswald, S., Thullner, M. (2012):
Removal of volatile organic compounds in vertical flow filters: predictions from reactive transport modeling
Ground Water Monit. Remediat. 32 (2), 106 - 121
Volltext (DOI)
12934 De Biase, C., Maier, U., Oswald, S., Thullner, M. (2012):
Reactive transport simulation of volatile organic compound removal in vertical flow soil filters
ModelCare 2011: Models – Repositories of Knowledge. 8th International Conference on Calibration and Reliability in Groundwater Modeling, 18-22 September 2011, Helmholtz Centre for Environmental Research – UFZ, Leipzig, Germany - Book of Abstracts
p. 62
11004 De Biase, C., Reger, D., Schmidt, A., Jechalke, S., Reiche, N., Martínez-Lavanchy, P.M., Rosell, M., van Afferden, M., Maier, U., Oswald, S.E., Thullner, M. (2011):
Treatment of volatile organic contaminants in a vertical flow filter: relevance of different removal processes
Ecol. Eng. 37 (9), 1292 - 1303
Volltext (DOI)
22348 Druhan, J.L., Winnick, M.J., Thullner, M. (2019):
Stable isotope fractionation by transport and transformation
In: Druhan, J., Tournassat, C. (eds.)
Reactive transport in natural and engineered systems
Rev. Mineral. Geochem. 85
Mineralogical Society of America (MSA) ; Geochemical Society , Chantilly, VA , p. 239 - 264
Volltext (DOI)
920 Fischer, A., Herklotz, I., Herrmann, S., Thullner, M., Weelink, S.A.B., Stams, A.J.M., Schlömann, M., Richnow, H.H., Vogt, C. (2008):
Combined carbon and hydrogen isotope fractionation investigations for elucidating benzene biodegradation pathways
Environ. Sci. Technol. 42 (12), 4356 - 4363
Volltext (DOI)
1758 Fischer, A., Theuerkorn, K., Stelzer, N., Gehre, M., Thullner, M., Richnow, H.H. (2007):
Applicability of stable isotope fractionation analysis for the characterization of benzene biodegradation in a BTEX-contaminated aquifer
Environ. Sci. Technol. 41 (10), 3689 - 3696
Volltext (DOI)
14303 Gharasoo, M., Centler, F., Fetzer, I., Thullner, M. (2014):
How the chemotactic characteristics of bacteria can determine their population patterns
Soil Biol. Biochem. 69 , 346 - 358
Volltext (DOI)
11954 Gharasoo, M., Centler, F., Regnier, P., Harms, H., Thullner, M. (2012):
A reactive transport modeling approach to simulate biogeochemical processes in pore structures with pore-scale heterogeneities
Environ. Modell. Softw. 30 (1), 102 - 114
Volltext (DOI)
16019 Gharasoo, M., Centler, F., van Cappellen, P., Wick, L.Y., Thullner, M. (2015):
Kinetics of substrate biodegradation under the cumulative effects of bioavailability and self-inhibition
Environ. Sci. Technol. 49 (9), 5529 - 5537
Volltext (DOI)
19263 Gharasoo, M., Thullner, M., Elsner, M. (2017):
Introduction of a new platform for parameter estimation of kinetically complex environmental systems
Environ. Modell. Softw. 98 , 12 - 20
Volltext (DOI)
23403 Golparvar, A., Kästner, M., Thullner, M. (2021):
Pore-scale modeling of microbial activity: What we have and what we need
Vadose Zone J. 20 (1), e20087
Volltext (DOI)
11056 Hanzel, J., Thullner, M., Harms, H., Wick, L.Y. (2011):
Microbial growth with vapor-phase substrate
Environ. Pollut. 159 (4), 858 - 864
Volltext (DOI)
11655 Hanzel, J., Thullner, M., Harms, H., Wick, L.Y. (2012):
Walking the tightrope of bioavailability: growth dynamics of PAH degraders on vapour-phase PAH
Microb. Biotechnol. 5 (1), 79 - 86
Volltext (DOI)
15650 Heße, F., Prykhodko, V., Attinger, S., Thullner, M. (2014):
Corrigendum to “Assessment of the impact of pore-scale mass-transfer restrictions on microbially-induced stable-isotope fractionation” [ADWR 74C (2014) 79–90]
Adv. Water Resour. 74 , 329
Volltext (DOI)
15649 Heße, F., Prykhodko, V., Attinger, S., Thullner, M. (2014):
Assessment of the impact of pore-scale mass-transfer restrictions on microbially-induced stable-isotope fractionation
Adv. Water Resour. 74 , 79 - 90
Volltext (DOI)
263 Heße, F., Radu, F.A., Thullner, M., Attinger, S. (2009):
Upscaling of the advection-diffusion-reaction equation with Monod reaction
Adv. Water Resour. 32 (8), 1336 - 1351
Volltext (DOI)
10091 Hesse, F., Harms, H., Attinger, S., Thullner, M. (2010):
Linear exchange model for the description of mass transfer limited bioavailability at the pore scale
Environ. Sci. Technol. 44 (6), 2064 - 2071
Volltext (DOI)
306 Kampara, M., Thullner, M., Harms, H., Wick, L.Y. (2009):
Impact of cell density on microbially induced stable isotope fractionation
Appl. Microbiol. Biotechnol. 81 (5), 977 - 985
Volltext (DOI)
1087 Kampara, M., Thullner, M., Richnow, H.H., Harms, H., Wick, L.Y. (2008):
Impact of bioavailability restrictions on microbially induced stable isotope fractionation. 2. Experimental evidence
Environ. Sci. Technol. 42 (17), 6552 - 6558
Volltext (DOI)
17011 Khan, A.M., Wick, L.Y., Harms, H., Thullner, M. (2016):
Biodegradation of vapor-phase toluene in unsaturated porous media: Column experiments
Environ. Pollut. 211 , 325 - 331
Volltext (DOI)
20721 Khan, A.M., Wick, L.Y., Thullner, M. (2018):
Applying the Rayleigh approach for stable isotope-based analysis of VOC biodegradation in diffusion-dominated systems
Environ. Sci. Technol. 52 (14), 7785 - 7795
Volltext (DOI)
320 Kindler, R., Miltner, A., Thullner, M., Richnow, H.-H., Kästner, M. (2009):
Fate of bacterial biomass derived fatty acids in soil and their contribution to soil organic matter
Org. Geochem. 40 (1), 29 - 37
Volltext (DOI)
22078 König, S., Köhnke, M.C., Firle, A.-L., Banitz, T., Centler, F., Frank, K., Thullner, M. (2019):
Disturbance size can be compensated for by spatial fragmentation in soil microbial ecosystems
Front. Ecol. Evol. 7 , art. 290
Volltext (DOI)
20490 König, S., Worrich, A., Banitz, T., Centler, F., Harms, H., Kästner, M., Miltner, A., Wick, L.Y., Thullner, M., Frank, K. (2018):
Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems
Sci. Rep. 8 , art. 9488
Volltext (DOI)
20133 König, S., Worrich, A., Banitz, T., Harms, H., Kästner, M., Miltner, A., Wick, L.Y., Frank, K., Thullner, M., Centler, F. (2018):
Functional resistance to recurrent spatially heterogeneous disturbances is facilitated by increased activity of surviving bacteria in a virtual ecosystem
Front. Microbiol. 9 , art. 734
Volltext (DOI)
18254 König, S., Worrich, A., Centler, F., Wick, L.Y., Miltner, A., Kästner, M., Thullner, M., Frank, K., Banitz, T. (2017):
Modelling functional resilience of microbial ecosystems: Analysis of governing processes
Environ. Modell. Softw. 89 , 31 - 39
Volltext (DOI)
13521 Leibeling, S., Maeß, M.B., Centler, F., Kleinsteuber, S., von Bergen, M., Thullner, M., Harms, H., Müller, R.H. (2013):
Posttranslational oxidative modification of (R)-2-(2,4-dichlorophenoxy)propionate/α-ketoglutarate-dependent dioxygenases (RdpA) leads to improved degradation of 2,4-dichlorophenoxyacetate (2,4-D)
Eng. Life Sci. 13 (3), 278 - 291
Volltext (DOI)
4333 Matisoff, G., Aguilera, D.R., Thullner, M. (2004):
Reactive transport modeling of sediment oxygen demand in Lake Erie sediments
Geochim. Cosmochim. Acta 68 (11 Suppl.), A339
Volltext (DOI)
5058 Mauclaire, L., Pelz, O., Thullner, M., Abraham, W.R., Zeyer, J. (2003):
Assimilation of toluene carbon along a bacteria-protist food chain determined by C-13-enrichment of biomarker fatty acids
J. Microbiol. Methods 55 (3), 635 - 649
Volltext (DOI)
4337 Mauclaire, L., Schürmann, A., Thullner, M., Gammeter, S., Zeyer, J. (2004):
Sand filtration in a water treatment plant: biological parameters responsible for clogging
J. Water Supply Res Technol.-Aqua 53 (2), 93 - 108
20092 Newcomer, M.E., Hubbard, S.S., Fleckenstein, J.H., Maier, U., Schmidt, C., Thullner, M., Ulrich, C., Flipo, F., Rubin, Y. (2018):
Influence of hydrological perturbations and riverbed sediment characteristics on hyporheic zone respiration of CO2 and N2
J. Geophys. Res.-Biogeosci. 123 (3), 902 - 922
Volltext (DOI)
17441 Newcomer, M.E., Hubbard, S.S., Fleckenstein, J.H., Maier, U., Schmidt, C., Thullner, M., Ulrich, C., Flipo, N., Rubin, Y. (2016):
Simulating bioclogging effects on dynamic riverbed permeability and infiltration
Water Resour. Res. 52 (4), 2883 - 2900
Volltext (DOI)
13301 Nick, H.M., Raoof, A., Centler, F., Thullner, M., Regnier, P. (2013):
Reactive dispersive contaminant transport in coastal aquifers: Numerical simulation of a reactive Henry problem
J. Contam. Hydrol. 145 , 90 - 104
Volltext (DOI)
17529 Otto, S., Banitz, T., Thullner, M., Harms, H., Wick, L.Y. (2016):
Effects of facilitated bacterial dispersal on the degradation and emission of a desorbing contaminant
Environ. Sci. Technol. 50 (12), 6320 - 6326
Volltext (DOI)
13897 Regnier, P., Friedlingstein, P., Ciais, P., Mackenzie, F.T., Gruber, N., Janssens, I.A., Laruelle, G.G., Lauerwald, R., Luyssaert, S., Andersson, A.J., Arndt, S., Arnosti, C., Borges, A.V., Dale, A.W., Gallego-Sala, A., Goddéris, Y., Goossens, N., Hartmann, J., Heinze, C., Ilyina, T., Joos, F., LaRowe, D.E., Leifeld, J., Meysman, F.J.R., Munhoven, G., Raymond, P.A., Spahni, R., Suntharalingam, P., Thullner, M. (2013):
Anthropogenic perturbation of the carbon fluxes from land to ocean
Nat. Geosci. 6 (8), 597 - 606
Volltext (DOI)
16815 Richter, S., Fetzer, I., Thullner, M., Centler, F., Dittrich, P. (2015):
Towards rule-based metabolic databases: a requirement analysis based on KEGG
Int. J. Data Min. Bioinform. 13 (3), 289 - 319
Volltext (DOI)
20253 Schmidt, S.I., Kreft, J.-U., Mackay, R., Picioreanu, C., Thullner, M. (2018):
Elucidating the impact of micro-scale heterogeneous bacterial distribution on biodegradation
Adv. Water Resour. 116 , 67 - 76
Volltext (DOI)
4547 Seki, K., Thullner, M., Baveye, P. (2004):
Nutrient uptake kinetics of filamentous microorganisms: Comparison of cubic, exponential, and Monod models
Ann. Microbiol. 54 (2), 181 - 188
3031 Seki, K., Thullner, M., Hanada, J., Miyazaki, T. (2006):
Moderate bioclogging leading to preferential flow paths in biobarriers
Ground Water Monit. Remediat. 26 (3), 68 - 76
Volltext (DOI)
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