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ID Publikation
21944 Bacht, M., Tarkka, M.T., Fernández López, I., Bönn, M., Brandl, R., Buscot, F., Feldhahn, L., Grams, T.E.E., Herrmann, S., Schädler, M. (2019):
Tree response to herbivory is affected by endogenous rhythmic growth and attenuated by cotreatment with a mycorrhizal fungus
Mol. Plant-Microbe Interact. 32 (6), 770 - 781
Volltext (DOI)
23236 Bouffaud, M.-L., Herrmann, S., Tarkka, M.T., Bönn, M., Feldhahn, L., Buscot, F. (2020):
Oak displays common local but specific distant gene regulation responses to different mycorrhizal fungi
BMC Genomics 21 , art. 399
Volltext (DOI)
22693 Breitkreuz, C., Buscot, F., Tarkka, M., Reitz, T. (2020):
Shifts between and among populations of wheat rhizosphere Pseudomonas, Streptomyces and Phyllobacterium suggest consistent phosphate mobilization at different wheat growth stages under abiotic stress
Front. Microbiol. 10 , art. 3109
Volltext (DOI)
15703 Caravaca, F., Maboreke, H., Kurth, F., Herrmann, S., Tarkka, M.T., Ruess, L. (2015):
Synergists and antagonists in the rhizosphere modulate microbial communities and growth of Quercus robur L.
Soil Biol. Biochem. 82 , 65 - 73
Volltext (DOI)
20909 Ferlian, O., Biere, A., Bonfante, P., Buscot, F., Eisenhauer, N., Fernandez, I., Hause, B., Herrmann, S., Krajinski-Barth, F., Meier, I.C., Pozo, M.J., Rasmann, S., Rillig, M.C., Tarkka, M.T., van Dam, N.M., Wagg, C., Martinez-Medina, A. (2018):
Growing research networks on mycorrhizae for mutual benefits
Trends Plant Sci. 23 (11), 975 - 984
Volltext (DOI)
11863 Frey-Klett, P., Burlinson, P., Deveau, A., Barret, M., Tarkka, M., Sarniguet, A. (2011):
Bacterial-fungal interactions: hyphens between agricultural, clinical, environmental, and food microbiologists
Microbiol. Mol. Biol. Rev. 75 (4), 583 - 609
Volltext (DOI)
1768 Frey-Klett, P., Garbaye, J., Tarkka, M. (2007):
The mycorrhiza helper bacteria revisited
New Phytol. 176 (1), 22 - 36
Volltext (DOI)
23238 Ganther, M., Bouffaud, M.-L., Gebauer, L., Buscot, F., Vetterlein, D., Heintz-Buschart, A., Tarkka, M. (2020):
Spatial sampling approach to unravel the impact of soil texture and root genotype on maize root gene expression profiles
22nd EGU General Assembly, EGU2020, Vienna, Austria, 4-8 May 2020
p. EGU2020-9707
Volltext (URL)
23237 Ganther, M., Yim, B., Ibrahim, Z., Bienert, M.D., Lippold, E., Maccario, L., Sørensen, S.J., Bienert, G.P., Vetterlein, D., Heintz-Buschart, A., Blagodatskaya, E., Smalla, K., Tarkka, M.T. (2020):
Compatibility of X-ray computed tomography with plant gene expression profiling, rhizosphere bacterial community composition and enzyme activity analyses
J. Exp. Bot. 71 (18), 5603 - 5614
Volltext (DOI)
15251 Goris, T., Schubert, T., Gadkari, J., Wubet, T., Tarkka, M., Buscot, F., Adrian, L., Diekert, G. (2014):
Insights into organohalide respiration and the versatile catabolism of Sulfurospirillum multivorans gained from comparative genomics and physiological studies
Environ. Microbiol. 16 (11), 3562 - 3580
Volltext (DOI)
21824 Graf, M., Bönn, M., Feldhahn, L., Kurth, F., Grams, T.E.E., Herrmann, S., Tarkka, M., Buscot, F., Scheu, S. (2019):
Collembola interact with mycorrhizal fungi in modifying oak morphology, C and N incorporation and transcriptomics
R. Soc. Open Sci. 6 (3), art. 181869
Volltext (DOI)
22812 Hamid, M., Reitz, T., Joseph, M.R.P., Hommel, K., Mahgoub, A., Elhassan, M.M., Buscot, F., Tarkka, M. (2020):
Diversity and geographic distribution of soil streptomycetes with antagonistic potential against actinomycetoma-causing Streptomyces sudanensis in Sudan and South Sudan
BMC Microbiol. 20 , art. 33
Volltext (DOI)
10037 Hampp, R., Tarkka, M.T. (2009):
Interaction with soil microorganisms
In: Varma, A., Kharkwal, A.C. (eds.)
Symbiotic fungi. Principles and practice
Soil Biology 18
Springer, Berlin, Heidelberg, p. 197 - 210
Volltext (DOI)
17152 Herrmann, S., Grams, T.E.E., Tarkka, M.T., Angay, O., Bacht, M., Bönn, M., Feldhahn, L., Graf, M., Kurth, F., Maboreke, H., Mailander, S., Recht, S., Fleischmann, F., Ruess, L., Schädler, M., Scheu, S., Schrey, S., Buscot, F. (2016):
Endogenous rhythmic growth, a trait suitable for the study of interplays between multitrophic interactions and tree development
Perspect. Plant Ecol. Evol. Syst. 19 , 40 - 48
Volltext (DOI)
16470 Herrmann, S., Recht, S., Boenn, M., Feldhahn, L., Angay, O., Fleischmann, F., Tarkka, M.T., Grams, T.E.E., Buscot, F. (2015):
Endogenous rhythmic growth in oak trees is regulated by internal clocks rather than resource availability
J. Exp. Bot. 66 (22), 7113 - 7127
Volltext (DOI)
3481 Juuti, J.T., Jokela, S., Tarkka, M.T., Paulin, L., Lahdensalo, J. (2005):
Two phylogenetically highly distinct β-tubulin genes of the basidiomycete Suillus bovinus
Curr. Genet. 47 (4), 253 - 263
Volltext (DOI)
15871 Kohler, A., Kuo, A., Nagy, L.G., Morin, E., Barry, K.W., Buscot, F., Canbäck, B., Choi, C., Cichocki, N., Clum, A., Colpaert, J., Copeland, A., Costa, M.D., Doré, J., Floudas, D., Gay, D., Girlanda, M., Henrissat, B., Herrmann, S., Hess, J., Högberg, N., Johansson, T., Khouja, H.-R., La Butti, K., Lahrmann, U., Levasseur, A., Lindquist, E.A., Lipzen, A., Marmeisse, R., Martino, E., Murat, C., Chew, Y., Ngan, C.Y., Nehls, U., Plett, J.M., Pringle, A., Ohm, R.A., Perotto, S.P., Riley, R., Rineau, F., Ruytinx, J., Salamov, A., Shah, F., Sun, H., Tarkka, M., Tritt, A., Veneault-Fourrey, C., Zuccaro, A., Tunlid, A., Grigoriev, I.V., Hibbett, D.S., Martin, F. (2015):
Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists
Nature Genet. 47 , 410 - 415
Volltext (DOI)
16477 Kurth, F., Feldhahn, L., Bönn, M., Herrmann, S., Buscot, F., Tarkka, M.T. (2015):
Large scale transcriptome analysis reveals interplay between development of forest trees and a beneficial mycorrhiza helper bacterium
BMC Genomics 16 , art. 658
Volltext (DOI)
15305 Kurth, F., Mailänder, S., Bönn, M., Feldhahn, L., Herrmann, S., Große, I., Buscot, F., Schrey, S.D., Tarkka, M.T. (2014):
Streptomyces-induced resistance against oak powdery mildew involves host plant responses in defense, photosynthesis, and secondary metabolism pathways
Mol. Plant-Microbe Interact. 27 (9), 891 - 900
Volltext (DOI)
14013 Kurth, F., Zeitler, K., Feldhahn, L., Neu, T.R., Weber, T., Krištůfek, V., Wubet, T., Herrmann, S., Buscot, F., Tarkka, M.T. (2013):
Detection and quantification of a mycorrhization helper bacterium and a mycorrhizal fungus in plant-soil microcosms at different levels of complexity
BMC Microbiol. 13 , art. 205
Volltext (DOI)
21308 Larras, F., Billoir, E., Baillard, V., Siberchicot, A., Scholz, S., Wubet, T., Tarkka, M., Schmitt-Jansen, M., Delignette-Muller, M.-L. (2018):
DRomics: A turnkey tool to support the use of the dose–response framework for omics data in ecological risk assessment
Environ. Sci. Technol. 52 (24), 14461 - 14468
Volltext (DOI)
23048 Larras, F., Billoir, E., Scholz, S., Tarkka, M., Wubet, T., Delignette-Muller, M.-L., Schmitt-Jansen, M. (2020):
A multi-omics concentration-response framework uncovers novel understanding of triclosan effects in the chlorophyte Scenedesmus vacuolatus
J. Hazard. Mater. 397 , art. 122727
Volltext (DOI)
365 Lehr, N.A., Adomas, A., Asiegbu, F.O., Hamp, R., Tarkka, M.T. (2009):
WS-5995 B, an antifungal agent inducing differential gene expression in the conifer pathogen Heterobasidion annosum but not in Heterobasidion abietinum
Appl. Microbiol. Biotechnol. 85 (2), 347 - 358
Volltext (DOI)
2006 Lehr, N.A., Schrey, S.D., Bauer, R., Hampp, R., Tarkka, M.T. (2007):
Suppression of plant defence response by a mycorrhiza helper bacterium
New Phytol. 174 (4), 892 - 903
Volltext (DOI)
1180 Lehr, N.A., Schrey, S.D., Hampp, R., Tarkka, M.T. (2008):
Root inoculation with a forest soil streptomycete leads to locally and systemically increased resistance against phytopathogens in Norway spruce
New Phytol. 177 (4), 965 - 976
Volltext (DOI)
15872 Lesur, I., Le Provost, G., Bento, P., Da Silva, C., Leplé, J.-C., Murat, F., Ueno, S., Bartholomé, J., Lalanne, C., Ehrenmann, F., Noirot, C., Burban, C., Léger, V., Amselem, J., Belser, C., Quesneville, H., Stierschneider, M., Fluch, S., Feldhahn, L., Tarkka, M., Herrmann, S., Buscot, F., Klopp, C., Kremer, A., Salse, J., Aury, J.-M., Plomion, C. (2015):
The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release
BMC Genomics 16 , art. 112
Volltext (DOI)
17767 Maboreke, H.R., Feldhahn, L., Bönn, M., Tarkka, M.T., Buscot, F., Herrmann, S., Menzel, R., Ruess, L. (2016):
Transcriptome analysis in oak uncovers a strong impact of endogenous rhythmic growth on the interaction with plant-parasitic nematodes
BMC Genomics 17 , art. 627
Volltext (DOI)
14018 Pavic, A., Stanković, S., Saljnikov, E., Krüger, D., Buscot, F., Tarkka, M., Marjanović, Z. (2013):
Actinobacteria may influence white truffle (Tuber magnatum Pico) nutrition, ascocarp degradation and interactions with other soil fungi
Fungal Ecol. 6 (6), 527 - 538
Volltext (DOI)
20830 Plomion, C., Aury, J.-M., Amselem, J., Leroy, T., Murat, F., Duplessis, S., Faye, S., Francillonne, N., Labadie, K., Le Provost, G., Lesur, I., Bartholomé, J., Faivre-Rampant, P., Kohler, A., Leplé, J.-C., Chantret, N., Chen, J., Diévart, A., Alaeitabar, T., Barbe, V., Belser, C., Bergès, H., Bodénès, C., Bogeat-Triboulot, M.-B., Bouffaud, M.-L., Brachi, B., Chancerel, E., Cohen, D., Couloux, A., Da Silva, C., Dossat, C., Ehrenmann, F., Gaspin, C., Grima-Pettenati, J., Guichoux, E., Hecker, A., Herrmann, S., Hugueney, P., Hummel, I., Klopp, C., Lalanne, C., Lascoux, M., Lasserre, E., Lemainque, A., Desprez-Loustau, M.-L., Luyten, I., Madoui, M.-A., Mangenot, S., Marchal, C., Maumus, F., Mercier, J., Michotey, C., Panaud, O., Picault, N., Rouhier, N., Rué, O., Rustenholz, C., Salin, F., Soler, M., Tarkka, M., Velt, A., Zanne, A.E., Martin, F., Wincker, P., Quesneville, H., Kremer, A., Salse, J. (2018):
Oak genome reveals facets of long lifespan
Nat. Plants 4 , 440 - 452
Volltext (DOI)
13650 Pöritz, M., Goris, T., Wubet, T., Tarkka, M.T., Buscot, F., Nijenhuis, I., Lechner, U., Adrian, L. (2013):
Genome sequences of two dehalogenation specialists - Dehalococcoides mccartyi strains BTF08 and DCMB5 enriched from the highly polluted Bitterfeld region
FEMS Microbiol. Lett. 343 (2), 101 - 104
Volltext (DOI)
21731 Rasul, M., Yasmin, S., Suleman, M., Zaheer, A., Reitz, T., Tarkka, M.T., Islam, E., Mirza, M.S. (2019):
Glucose dehydrogenase gene containing phosphobacteria for biofortification of Phosphorus with growth promotion of rice
Microbiol. Res. 223–225 , 1 - 12
Volltext (DOI)
2946 Riedlinger, J., Schrey, S.D., Tarkka, M.T., Hampp, R., Kapur, M., Fiedler, H.P. (2006):
Auxofuran, a novel metabolite that stimulates the growth of fly agaric, is produced by the mycorrhiza helper bacterium Streptomyces strain AcH 505
Appl. Environ. Microb. 72 (5), 3550 - 3557
Volltext (DOI)
5173 Saarma, K., Tarkka, M.T., Itavaara, M., Fagerstedt, K.V. (2003):
Heat shock protein synthesis is induced by diethyl phthalate but not by di(2-ethylhexyl) phthalate in radish (Raphanus sativus)
J. Plant Physiol. 160 (9), 1001 - 1010
Volltext (DOI)
12859 Schrey, S.D., Erkenbrack, E., Früh, E., Fengler, S., Hommel, K., Horlacher, N., Schulz, D., Ecke, M., Kulik, A., Fiedler, H.P., Hampp, R., Tarkka, M.T. (2012):
Production of fungal and bacterial growth modulating secondary metabolites is widespread among mycorrhiza-associated streptomycetes
BMC Microbiol. 12 , art. 164
Volltext (DOI)
2274 Schrey, S.D., Salo, V., Raudaskoski, M., Hampp, R., Nehls, U., Tarkka, M.T. (2007):
Interaction with mycorrhiza helper bacterium Streptomyces sp. AcH 505 modifies organisation of actin cytoskeleton in the ectomycorrhizal fungus Amanita muscaria (fly agaric)
Curr. Genet. 52 (2), 77 - 85
Volltext (DOI)
3784 Schrey, S.D., Schellhammer, M., Ecke, M., Hampp, R., Tarkka, M.T. (2005):
Mycorrhiza helper bacterium Streptomyces AcH 505 induces differential gene expression in the ectomycorrhizal fungus Amanita muscaria
New Phytol. 168 (1), 205 - 216
Volltext (DOI)
1428 Schrey, S.D., Tarkka, M.T. (2008):
Friends and foes: streptomycetes as modulators of plant disease and symbiosis
Antonie Van Leeuwenhoek 94 (1), 11 - 19
Volltext (DOI)
1511 Tarkka, M., Hampp, R. (2008):
Secondary metabolites of soil streptomycetes in biotic interactions
In: Karlovsky, P. (ed.)
Secondary metabolites in soil ecology
Soil Biology 14
Springer, Berlin, Heidelberg, p. 107 - 126
Volltext (DOI)
22697 Tarkka, M., Hildebrandt, J. (2020):
Pilzarten und ihre pflanzlichen Wirte im Klimawandel
Volltext (URL)
1509 Tarkka, M., Schrey, S.D., Hampp, R. (2008):
Plant associated soil micro-organisms
In: Nautiyal, C.S., Dion, P. (eds.)
Molecular mechanisms of plant and microbe coexistence
Soil Biology 15
Springer, Berlin, Heidelberg, p. 3 - 51
Volltext (DOI)
20888 Tarkka, M.T., Drigo, B., Deveau, A. (2018):
Mycorrhizal microbiomes
Mycorrhiza 28 (5-6), 403 - 409
Volltext (DOI)
16124 Tarkka, M.T., Feldhahn, L., Buscot, F., Wubet, T. (2015):
Genome sequence of the mycorrhiza helper bacterium Streptomyces sp. strain AcH 505
Genome Announc. 3 (2), e01386-14
Volltext (DOI)
16123 Tarkka, M.T., Feldhahn, L., Krüger, D., Arnold, N., Buscot, F., Wubet, T. (2015):
Draft genome sequence of Streptomyces sp. Strain 150FB, a mushroom mycoparasite antagonist
Genome Announc. 3 (2), e01441-14
Volltext (DOI)
1508 Tarkka, M.T., Frey-Klett, P. (2008):
Mycorrhiza helper bacteria
In: Varma, A. (ed.)
Mycorrhiza. State of the art, genetics and molecular biology, eco-function, biotechnology, eco-physiology, structure and systematics
Springer, Berlin, Heidelberg, p. 113 - 132
Volltext (DOI)
13681 Tarkka, M.T., Herrmann, S., Wubet, T., Feldhahn, L., Recht, S., Kurth, F., Mailänder, S., Bönn, M., Neef, M., Angay, O., Bacht, M., Graf, M., Maboreke, H., Fleischmann, F., Grams, T.E.E., Ruess, L., Schädler, M., Brandl, R., Scheu, S., Schrey, S.D., Grosse, I., Buscot, F. (2013):
OakContigDF159.1, a reference library for studying differential gene expression in Quercus robur during controlled biotic interactions: use for quantitative transcriptomic profiling of oak roots in ectomycorrhizal symbiosis
New Phytol. 199 (2), 529 - 540
Volltext (DOI)
1510 Tarkka, M.T., Lehr, N.A., Hampp, R., Schrey, S.D. (2008):
Plant behavior upon contact with streptomycetes
Plant Signaling & Behavior 3 (11), 1 - 3
Volltext (URL)
2362 Tarkka, M.T., Piechulla, B. (2007):
Aromatic weapons: truffles attack plants by the production of volatiles
New Phytol. 175 (3), 381 - 383
Volltext (DOI)
654 Tarkka, M.T., Sarniguet, A., Frey-Klett, P. (2009):
Inter-kingdom encounters: recent advances in molecular bacterium-fungus interactions
Curr. Genet. 55 (3), 233 - 243
Volltext (DOI)
3067 Tarkka, M.T., Schrey, S., Nehls, U. (2006):
The α-tubulin gene AmTuba1: a marker for rapid mycelial growth in the ectomycorrhizal basidiomycete Amanita muscaria
Curr. Genet. 49 (5), 294 - 301
Volltext (DOI)
12578 Taubert, M., Vogt, C., Wubet, T., Kleinsteuber, S., Tarkka, M.T., Harms, H., Buscot, F., Richnow, H.-H., von Bergen, M., Seifert, J. (2012):
Protein-SIP enables time-resolved analysis of the carbon flux in a sulfate-reducing, benzene-degrading microbial consortium
ISME J. 6 (12), 2291 - 2301
Volltext (DOI)
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