Publication Data for Bandara et al 2021 - Front.Plant.Sci LRWhite Embedding Method 0 11158

Projekt
POF3 - T123D631 - Rhizosphere
Beschreibung
Data acquired in the framework of the SPP 2089, funded by the DFG.

This data folder associated with the publication "Microbial Identification, High-Resolution Microscopy and Spectrometry of the Rhizosphere in its Native Spatial Context" by Bandara et al. (2021), Frontiers in Plant Science Journal. DOI: 10.3389/fpls.2021.668929

The compressed folder contains ten subfolders corresponding to each technique as described below. Each folder named as Origin contains the original data, while processed data is included in the folder named as Export. In total there are 251 files.

1. CARD-FISH:
This folder contains Epifluorescence micrographs presented in Figure 8d and 10a. Original data format is .czi from Carl Zeiss imaging. Exported images format is .tif. Folder contains two folders for individual samples.

2. Correlia_Registered_Datasets
This folder contains two Correlia (https://www.ufz.de/correlia) projects used to register different microscopy images presented in Figure 8d and Figure9.

3. DarkField_Figure3_Map
This folder contains stitched darkfield micrographs of CY0211 sample (Figure3). Text file contains the imaging information.

4. Epifluorescence
This folder contains Epifluorescence images presented in Figure3, Figure 10

5. HIM
This folder contains Helium ion micrographs presented in Figure 2 and Figure 6d

6. nanoSIMS
This folder contains nanoSIMS data presented in Figure 6 and Figure 10

7. Raman
This folder contains confocal Raman Microscopy data presented in Figure 7

8. Roughness Measurements
This folder contains surface profile data presented in Figure 2b

9. SEM-EDX
This folder contains SEM and EDX data presented in Figure 5 and Figure 8d

10.ToFSIMS
This folder contains ToFSIMS data presented in Figure 4

Funding:
This data was produced within the framework of the priority program SPP 2089, “Rhizosphere spatiotemporal organization-a key to rhizosphere functions” funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Projektnummer 403641683 (RI-903/7-1). Research work of Yalda Devoudpour was supported by Deutsche Forschungsgemeinschaft Integration of Refugee Scientists and Academics.
DOI
https://doi.org/10.48758/ufz.11158
Zitiervorschlag (APA)
Imihami Mudiyanselage, C. C. D. B., Schmidt, M., Stryhanyuk, H., Musat, N., Richnow, H. H., & Davoudpour, Y. (2021). Publication Data for Bandara et al 2021 - Front.Plant.Sci LRWhite Embedding Method. Helmholtz-Zentrum für Umweltforschung. https://doi.org/10.48758/UFZ.11158
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Metadaten Kataloge
Dublin Core
URI
https://www.ufz.de/record/dmp/archive/11158
DOI
10.48758/ufz.11158
Thema
Original Data in a Publication
ToF-SIMS
nanoSIMS
CARD-FISH
Correlative Microscopy
Veröffenlichungsdatum
07.07.2021
Geltungsbereich
Plants were grown in climate chamber UFZ Halle. Resin embedding done at ProVIS lab, UFZ, Leipzig.
Datenart
Sammlung verschiedener Daten
Datenqualität
qualitätsgesicherte Daten
Datenstatus
Rohdaten
bearbeitete Daten
Datenformat
czi
correlia
jpg
tif
im
check.im
trace
wip
plux
cal
ita
itm
itax
txt
Urheber
Imihami Mudiyanselage, Chiththaka Chaturanga Devapriya Bandara
Schmidt, Matthias
Stryhanyuk, Hryhoriy
Musat, Niculina
Richnow, Hans Hermann
Davoudpour, Yalda
Herausgeber
Helmholtz-Zentrum für Umweltforschung
Rechteinhaber
Helmholtz Centre for Environmental Research
Quelle/Ursprung
Not Applicable
Beziehungen zu verwandten Daten
Not Applicable
Kontakt
Content-related contact: Chaturanga D. Bandara (chatu.im@ufz.de)
Content-related contact: Hryhoriy Stryhanyuk (gregory.stryhanyuk@ufz.de)
Content-related contact: Niculina Musat (niculina.musat@ufz.de)
Zeitpunkt oder -bereich der Erzeugung der Daten
10.06.2020 - 30.03.2021
Sprache des Inhalts
Englisch
Zielgruppe
Participants of SPP2089
Besitzänderung
None
Lehrmethode
-
Aktualisierungsmethode
-
Aktualisierungshäufigkeit
-
Aktualisierungspolitik
Der Datenbestand wird nicht erweitert
Zugriffsrechte
freier Zugriff