Martin Schmidt

Contact


Martin Schmidt

Scientist and Bioinformatician

Department of Environmental Immunology and Core Facility Studies
Helmholtz Centre for Environmental Research – UFZ
Permoserstr. 15
04318 Leipzig
Germany

Tel.: +49 341 235-1550
Fax: +49 341 235-1787

Martin Schmidt

Research Interests

  • Influence of lifetime exposures / nutritional compounds on genetic and epigenetic perturbations and relation to the development of diseases/ phenotype (Environmental epigenetics)
  • Chromatin mechanisms and connection to the environment (biology)
  • Molecular, especially genetic and epigenetic, and physiological analyses in trans-generational contexts (molecular biology and bioinformatics)
  • Chromatin state/Transcription of genes and repeats (cell and molecular biology)
  • Establishment and removal of cytosine methylation and histone modifications (technology)


Curriculum vitae / Scientific career 

2009

Internship, Fraunhofer Institute for Cell Therapy and Immunology, Leipzig, Germany

2010

B.Sc. Molecular Biotechnology, Dresden University of Technology, Dresden, Germany

2013

M.Sc. Biology, Dresden University of Technology, Dresden, Germany

2013

Course, Epigenetic control of gene expression, University of Melbourne, Melbourne, Australia

2013 - 2016

Scientist, Crop Biotechnology and Bioinformatics, Flanders Interuniversity Institute for Biotechnology (VIB) Department Plant Systems Biology (PSB), Ghent, Belgium

2015

Invited speaker, Gordon Research Seminar; Epigenetics: Mechanisms of Mitotic and Meiotic Epigenetic Inheritance, Waltham / Boston, United States and Gordon Research Conference; Epigenetics, Waltham / Boston, United States

since 01/2017

Scientist, Health Research, Helmholtz Centre for Environmental Research – UFZ, Department of Environmental Immunology and Core Facility Studies (Dr. Irina Lehmann), Leipzig, Germany


Publications

Schmidt, M., Van Bel, M., Woloszynska, M., Slabbinck, B., Martens, C., De Block, M., Coppens, F. and Van Lijsebettens, M. (2017) Plant-RRBS, a bisulfite and next-generation sequencing-based methylome profiling method enriching for coverage of cytosine positions, BMC Plant Biology, Vol. 17, No. 115

Bey, T., Jamge, S., Klemme, S., Komar, D. N., Le Gall, S., Mikulski, P., Schmidt, M. (equal contribution), Zicola, J., Berr, A. (2016): Chromatin and epigenetics in all their states. Epigenetics, Vol. 11, No. 8, Pages 625-634

Schmidt, M., Hense, S., Minoche, A. E., Dohm, J. C., Himmelbauer, H., Schmidt, T. and Zakrzewski, F. (2014): Sytosine methylation of an ancient satellite family in the wild beet Beta procumbens, Cytogenetic and Genome Research, Vol. 143, No. 1-3, Pages 157-167