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22888 Ananbeh, H., Merlos Rodrigo, M.A., Jelinkova, P., Strmiska, V., Splichal, Z., Jehmlich, N., Michalkova, H., Stojanović, M., Voberkova, S., Adam, V., Moulick, A. (2020):
Soil protein as a potential antimicrobial agent against methicillin-resistant Staphylococcus aureus
Environ. Res. 188 , art. 109320
full text (doi)
22245 Anselmann, S.E.L., Löffler, C., Stärk, H.-J., Jehmlich, N., von Bergen, M., Brüls, T., Boll, M. (2019):
The class II benzoyl‐coenzyme A reductase complex from the sulfate‐reducing Desulfosarcina cetonica
Environ. Microbiol. 21 (11), 4241 - 4252
full text (doi)
21395 Bastida, F., Crowther, T.W., Prieto, I., Routh, D., García, C., Jehmlich, N. (2018):
Climate shapes the protein abundance of dominant soil bacteria
Sci. Total Environ. 640–641 , 18 - 21
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22110 Bastida, F., García, C., Fierer, N., Eldridge, D.J., Bowker, M.A., Abades, S., Alfaro, F.D., Berhe, A.A., Cutler, N.A., Gallardo, A., García-Velázquez, L., Hart, S.C., Hayes, P.E., Hernández, T., Hseu, Z.-Y., Jehmlich, N., Kirchmair, M., Lambers, H., Neuhauser, S., Peña-Ramírez, V.M., Pérez, C.A., Reed, S.C., Santos, F.A.M., Siebe, C., Sullivan, B.W., Trivedi, P., Vera, A., Williams, M.A., Moreno, J.L., Delgado-Baquerizo, M. (2019):
Global ecological predictors of the soil priming effect
Nat. Commun. 10 , art. 3481
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16253 Bastida, F., García, C., von Bergen, M., Moreno, J.L., Richnow, H.H., Jehmlich, N. (2015):
Deforestation fosters bacterial diversity and the cyanobacterial community responsible for carbon fixation processes under semiarid climate: a metaproteomics study
Appl. Soil Ecol. 93 , 65 - 67
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17882 Bastida, F., Jehmlich, N. (2016):
It's all about functionality: How can metaproteomics help us to discuss the attributes of ecological relevance in soil?
J. Proteomics 144 , 159 - 161
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17181 Bastida, F., Jehmlich, N., Lima, K., Morris, B.E.L., Richnow, H.H., Hernández, T., von Bergen, M., García, C. (2016):
The ecological and physiological responses of the microbial community from a semiarid soil to hydrocarbon contamination and its bioremediation using compost amendment
J. Proteomics 135 , 162 - 169
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21543 Bastida, F., Jehmlich, N., Martínez-Navarro, J., Bayona, V., García, C., Moreno, J.L. (2019):
The effects of struvite and sewage sludge on plant yield and the microbial community of a semiarid Mediterranean soil
Geoderma 337 , 1051 - 1057
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15233 Bastida, F., Jehmlich, N., Ondoño, S., von Bergen, M., García, C., Moreno, J.L. (2014):
Characterization of the microbial community in biological soil crusts dominated by Fulgensia desertorum (Tomin) Poelt and Squamarina cartilaginea (With.) P. James and in the underlying soil
Soil Biol. Biochem. 76 , 70 - 79
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19961 Bastida, F., Jehmlich, N., Torres, I.F., García, C. (2018):
The extracellular metaproteome of soils under semiarid climate: A methodological comparison of extraction buffers
Sci. Total Environ. 619–620 , 707 - 711
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21643 Bastida, F., López-Mondéjar, R., Baldrian, P., Andrés-Abellán, M., Jehmlich, N., Torres, I.F., García, C., López-Serrano, F.R. (2019):
When drought meets forest management: Effects on the soil microbial community of a Holm oak forest ecosystem
Sci. Total Environ. 662 , 276 - 286
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9775 Bastida, F., Rosell, M., Franchini, A.G., Seifert, J., Finsterbusch, S., Jehmlich, N., Jechalke, S., von Bergen, M., Richnow, H.H. (2010):
Elucidating MTBE degradation in a mixed consortium using a multidisciplinary approach
FEMS Microbiol. Ecol. 73 (2), 370 - 384
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19284 Bastida, F., Torres, I.F., Andrés-Abellán, M., Baldrian, P., López-Mondéjar, R., Větrovský, T., Richnow, H.H., Starke, R., Ondoño, S., García, C., López-Serrano, F., Jehmlich, N. (2017):
Differential sensitivity of total and active soil microbial communities to drought and forest management
Glob. Change Biol. 23 (10), 4185 - 4203
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17869 Bastida, F., Torres, I.F., Moreno, J.L., Baldrian, P., Ondoño, S., Ruiz-Navarro, A., Hernández, T., Richnow, H.H., Starke, R., García, C., Jehmlich, N. (2016):
The active microbial diversity drives ecosystem multifunctionality and is physiologically related to carbon availability in Mediterranean semi-arid soils
Mol. Ecol. 25 (18), 4660 - 4673
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20250 Becher, E., Heese, A., Claußen, L., Eisen, S., Jehmlich, N., Rohwerder, T., Purswani, J. (2018):
Active site alanine preceding catalytic cysteine determines unique substrate specificity in bacterial CoA‐acylating prenal dehydrogenase
FEBS Lett. 592 (7), 1150 - 1160
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55 Benndorf, D., Vogt, C., Jehmlich, N., Schmidt, Y., Thomas, H., Woffendin, G., Shevchenko, A., Richnow, H.-H., von Bergen, M. (2009):
Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments
Biodegradation 20 (6), 737 - 750
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22243 Buettner, C., von Bergen, M., Jehmlich, N., Noll, M. (2019):
Pseudomonas spp. are key players in agricultural biogas substrate degradation
Sci. Rep. 9 , 12871
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20844 Cerdó, T., Ruiz, A., Acuña, I., Jáuregui, R., Jehmlich, N., Haange, S.-B., von Bergen, M., Suárez, A., Campoy, C. (2018):
Gut microbial functional maturation and succession during human early life
Environ. Microbiol. 20 (6), 2160 - 2177
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19570 Chupani, L., Niksirat, H., Lünsmann, V., Haange, S.-B., von Bergen, M., Jehmlich, N., Zuskova, E. (2018):
Insight into the modulation of intestinal proteome of juvenile common carp (Cyprinus carpio L.) after dietary exposure to ZnO nanoparticles
Sci. Total Environ. 613-614 , 62 - 71
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18492 Chupani, L., Zusková, É., Niksirat, H., Panáček, A., Lünsmann, V., Haange, S.-B., von Bergen, M., Jehmlich, N. (2017):
Effects of chronic dietary exposure of zinc oxide nanoparticles on the serum protein profile of juvenile common carp (Cyprinus carpio L.)
Sci. Total Environ. 579 , 1504 - 1511
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16969 Daims, H., Lebedeva, E.V., Pjevac, P., Han, P., Herbold, C., Albertsen, M., Jehmlich, N., Palatinszky, M., Vierheilig, J., Bulaev, A., Kirkegaard, R.H., von Bergen, M., Rattei, T., Bendinger, B., Nielsen, P.H., Wagner, M. (2015):
Complete nitrification by Nitrospira bacteria
Nature 528 (7583), 504 - 509
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21292 Deutsch, E.W., Perez-Riverol, Y., Chalkley, R.J., Wilhelm, M., Tate, S., Sachsenberg, T., Walzer, M., Käll, L., Delanghe, B., Böcker, S., Schymanski, E.L., Wilmes, P., Dorfer, V., Kuster, B., Volders, P.-J., Jehmlich, N., Vissers, J.P.C., Wolan, D.W., Wang, A.Y., Mendoza, L., Shofstahl, J., Dowsey, A.W., Griss, J., Salek, R.M., Neumann, S., Binz, P.-A., Lam, H., Vizcaíno, J.A., Bandeira, N., Röst, H. (2018):
Expanding the use of spectral libraries in proteomics
J. Proteome Res. 17 (12), 4051 - 4060
full text (doi)
17902 Dey, P., Gola, D., Mishra, A., Malik, A., Kumar, P., Singh, D.K., Patel, N., von Bergen, M., Jehmlich, N. (2016):
Comparative performance evaluation of multi-metal resistant fungal strains for simultaneous removal of multiple hazardous metals
J. Hazard. Mater. 318 , 679 - 685
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22942 Dey, P., Malik, A., Mishra, A., Singh, D.K., von Bergen, M., Jehmlich, N. (2020):
Mechanistic insight to mycoremediation potential of a metal resistant fungal strain for removal of hazardous metals from multimetal pesticide matrix
Environ. Pollut. 262 , art. 114255
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18629 Ebenau-Jehle, C., Mergelsberg, M., Fischer, S., Brüls, T., Jehmlich, N., von Bergen, M., Boll, M. (2017):
An unusual strategy for the anoxic biodegradation of phthalate
ISME J. 11 (1), 224 - 236
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22762 Farag, M.A., Abdelwareth, A., Sallam, I.E., el Shorbagi, M., Jehmlich, N., Fritz, K., Schaepe, S., Rolle-Kampczyk, U., Ehrlich, A., Wessjohann, L.A., von Bergen, M. (2020):
Metabolomics reveals impact of seven functional foods on metabolic pathways in a gut microbiota model
J. Adv. Res. 23 , 47 - 59
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9936 Fetzer, I., Jehmlich, N., Vogt, C., Richnow, H.H., Seifert, J., Harms, H., von Bergen, M., Schmidt, F. (2010):
Calculation of partial isotope incorporation into peptides measured by mass spectrometry
BMC Res. Notes 3 , art. 178
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22700 Fritz-Wallace, K., Engelmann, B., Krause, J.L., Schäpe, S.S., Pöppe, J., Herberth, G., Rösler, U., Jehmlich, N., von Bergen, M., Rolle-Kampczyk, U. (2020):
Quantification of glyphosate and AMPA from microbiome reactor fluids
Rapid Commun. Mass Spectrom. 34 (7), e8668
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22068 Geiger, R.A., Junghare, M., Mergelsberg, M., Ebenau‐Jehle, C., Jesenofsky, V.J., Jehmlich, N., von Bergen, M., Schink, B., Boll, M. (2019):
Enzymes involved in phthalate degradation in sulphate‐reducing bacteria
Environ. Microbiol. 21 (10), 3601 - 3612
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14803 Goodman, V., Müller, A., Gröger-Arndt, H., Schlosser, D., Jehmlich, N., Treudler, R., Lehmann, I., Simon, J.-C., von Bergen, M. (2011):
Identification of spore specific allergen candidates from Penicillium chrysogenum
Journal of Integrated OMICS 1 (2), 272 - 279
full text (doi)
17865 Goris, T., Schiffmann, C.L., Gadkari, J., Adrian, L., von Bergen, M., Diekert, G., Jehmlich, N. (2016):
Proteomic data set of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates
Data in Brief 8 , 637 - 642
full text (doi)
16610 Goris, T., Schiffmann, C.L., Gadkari, J., Schubert, T., Seifert, J., Jehmlich, N., von Bergen, M., Diekert, G. (2015):
Proteomics of the organohalide-respiring Epsilonproteobacterium Sulfurospirillum multivorans adapted to tetrachloroethene and other energy substrates
Sci. Rep. 5 , art. 13794
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16758 Grob, C., Taubert, M., Howat, A.M., Burns, O.J., Dixon, J.L., Richnow, H.H., Jehmlich, N., von Bergen, M., Chen, Y., Murrell, J.C. (2015):
Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph
Environ. Microbiol. 17 (10), 4007 - 4018
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17640 Haange, S.-B., Jehmlich, N. (2016):
Proteomic interrogation of the gut microbiota: potential clinical impact
Expert Rev. Proteomics 13 (6), 535 - 537
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21800 Haange, S.-B., Jehmlich, N., Hoffmann, M., Weber, K., Lehmann, J., von Bergen, M., Slanina, J. (2019):
Disease development is accompanied by changes in bacterial protein abundance and functions in a refined model of dextran sulfate sodium (DSS)-induced colitis
J. Proteome Res. 18 (4), 1774 - 1786
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22657 Haange, S.-B., Jehmlich, N., Jacobi, T., von Bergen, M. (2019):
Chancen und Risiken von Metaproteomik in der Mikrobiomforschung. Opportunities and pitfalls of metaproteomics in microbiome research
Adipositas - Ursachen, Folgeerkrankungen, Therapie 13 (4), 205 - 213
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22813 Haange, S.-B., Jehmlich, N., Krügel, U., Hintschich, C., Wehrmann, D., Hankir, M., Seyfried, F., Froment, J., Hübschmann, T., Müller, S., Wissenbach, D.K., Kang, K.H., Buettner, C., Panagiotou, G., Noll, M., Rolle-Kampczyk, U., Fenske, W., von Bergen, M. (2020):
Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss
Microbiome 8 , art. 13
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16880 Hartwig, S., Thomas, C., Krumova, N., Quitzke, V., Türkowsky, D., Jehmlich, N., Adrian, L., Sawers, R.G. (2015):
Heterologous complementation studies in Escherichia coli with the Hyp accessory protein machinery from Chloroflexi provide insight into [NiFe]-hydrogenase large subunit recognition by the HypC protein family
Microbiology-(UK) 161 (11), 2204 - 2219
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19775 Herbold, C.W., Lehtovirta-Morley, L.E., Jung, M.-Y., Jehmlich, N., Hausmann, B., Han, P., Loy, A., Pester, M., Sayavedra-Soto, L.A., Rhee, S.-K., Prosser, J.I., Nicol, G.W., Wagner, M., Gubry-Rangin, C. (2017):
Ammonia-oxidising archaea living at low pH: Insights from comparative genomics
Environ. Microbiol. 19 , 4939 - 4952
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21394 Herbst, F.-A., Jehmlich, N., von Bergen, M., Schmidt, F. (2018):
Sulfur-34S and 36S stable isotope labeling of amino acids for quantification (SULAQ34/36) of proteome analyses
In: Becher, D. (ed.)
Microbial proteomics : methods and protocols
Methods in Molecular Biology 1841
Humana Press, p. 163 - 174
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17293 Herbst, F.-A., Lünsmann, V., Kjeldal, H., Jehmlich, N., Tholey, A., von Bergen, M., Nielsen, J.L., Hettich, R.L., Seifert, J., Nielsen, P.H. (2016):
Enhancing metaproteomics—The value of models and defined environmental microbial systems
Proteomics 16 (5), 783 - 798
full text (doi)
13673 Herbst, F.-A., Taubert, M., Jehmlich, N., Behr, T., Schmidt, F., von Bergen, M., Seifert, J. (2013):
Sulfur-34S stable isotope labeling of amino acids for quantification (SULAQ34) of proteomic changes in Pseudomonas fluorescens during naphthalene degradation
Mol. Cell. Proteomics 12 (8), 2060 - 2069
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23721 Jacoby, C., Krull, J., Andexer, J., Jehmlich, N., von Bergen, M., Brüls, T., Boll, M. (2020):
Channeling C1 metabolism toward S-adenosylmethionine-dependent conversion of estrogens to androgens in estrogen-degrading bacteria
mBio 11 (4), e01259-20
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10121 Jehmlich, N., Fetzer, I., Seifert, J., Mattow, J., Vogt, C., Harms, H., Thiede, B., Richnow, H.H., von Bergen, M., Schmidt, F. (2010):
Decimal place slope: a fast and precise method for quantifying 13C incorporation levels for detecting the metabolic activity of microbial species
Mol. Cell. Proteomics 9 (6), 1221 - 1227
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10123 Jehmlich, N., Hübschmann, T., Gesell Salazar, M., Völker, U., Benndorf, D., Müller, S., von Bergen, M., Schmidt, F. (2010):
Advanced tool for characterization of microbial cultures by combining cytomics and proteomics
Appl. Microbiol. Biotechnol. 88 (2), 575 - 584
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10122 Jehmlich, N., Kleinsteuber, S., Vogt, C., Benndorf, D., Harms, H., Schmidt, F., von Bergen, M., Seifert, J. (2010):
Phylogenetic and proteomic analysis of an anaerobic toluene-degrading community
J. Appl. Microbiol. 109 (6), 1937 - 1945
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12053 Jehmlich, N., Kopinke, F.-D., Lenhard, S., Vogt, C., Herbst, F.-A., Seifert, J., Lissner, U., Völker, U., Schmidt, F., von Bergen, M. (2012):
Sulfur-36S stable isotope labeling of amino acids for quantification (SULAQ)
Proteomics 12 (1), 37 - 42
full text (doi)
1062 Jehmlich, N., Schmidt, F., Hartwich, M., von Bergen, M., Richnow, H.H., Vogt, C. (2008):
Incorporation of carbon and nitrogen atoms into proteins measured by protein-based stable isotope probing (Protein-SIP)
Rapid Commun. Mass Spectrom. 22 (18), 2889 - 2897
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10124 Jehmlich, N., Schmidt, F., Taubert, M., Seifert, J., Bastida, F., von Bergen, M., Richnow, H.-H., Vogt, C. (2010):
Protein-based stable isotope probing
Nat. Protoc. 5 (12), 1957 - 1966
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294 Jehmlich, N., Schmidt, F., Taubert, M., Seifert, J., von Bergen, M., Richnow, H.-H., Vogt, C. (2009):
Comparison of methods for simultaneous identification of bacterial species and determination of metabolic activity by protein-based stable isotope probing (Protein-SIP) experiments
Rapid Commun. Mass Spectrom. 23 (12), 1871 - 1878
full text (doi)
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