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ID Publikation
9745 Altenburger, R., Berns, A.E., Bittens, M., Brack, W., Burauel, P., Centler, F., Daus, B., Goss, K.-U., Harms, H., Kopinke, F.-D., Kühnel, D., Liess, M., Mackenzie, K., Miltner, A., Thullner, M., Wennrich, R., Wick, L.Y. (2010):
Chemicals in the environment (CITE). Report of the First Annual Conference of the Helmholtz research topic CITE
UWSF 22 (4), 502 - 506
Volltext (DOI)
17188 Alvarez-Zaldívar, P., Centler, F., Maier, U., Thullner, M., Imfeld, G. (2016):
Biogeochemical modelling of in situ biodegradation and stable isotope fractionation of intermediate chloroethenes in a horizontal subsurface flow wetland
Ecol. Eng. 90 , 170 - 179
Volltext (DOI)
23062 Becker, D., Popp, D., Harms, H., Centler, F. (2020):
A modular metagenomics pipeline allowing for the inclusion of prior knowledge using the example of anaerobic digestion
Microorganisms 8 (5), art. 669
Volltext (DOI)
54 Benkö, G., Centler, F., Dittrich, P., Flamm, C., Stadler, B.M.R., Stadler, P.F. (2009):
A topological approach to chemical organizations
Artif. Life 15 (1), 71 - 88
Volltext (DOI)
18095 Berthold, T., Centler, F., Hübschmann, T., Remer, R., Thullner, M., Harms, H., Wick, L.Y. (2016):
Mycelia as a focal point for horizontal gene transfer among soil bacteria
Sci. Rep. 6 , art. 36390
Volltext (DOI)
20987 Bonk, F., Popp, D., Harms, H., Centler, F. (2018):
PCR-based quantification of taxa-specific abundances in microbial communities: Quantifying and avoiding common pitfalls
J. Microbiol. Methods 153 , 139 - 147
Volltext (DOI)
21502 Bonk, F., Popp, D., Weinrich, S., Sträuber, H., Becker, D., Kleinsteuber, S., Harms, H., Centler, F. (2019):
Determination of microbial maintenance in acetogenesis and methanogenesis by experimental and modeling techniques
Front. Microbiol. 10 , art. 166
Volltext (DOI)
21221 Bonk, F., Popp, D., Weinrich, S., Sträuber, H., Kleinsteuber, S., Harms, H., Centler, F. (2018):
Ammonia inhibition of anaerobic volatile fatty acid degrading microbial communities
Front. Microbiol. 9 , art. 2921
Volltext (DOI)
20988 Bonk, F., Popp, D., Weinrich, S., Sträuber, H., Kleinsteuber, S., Harms, H., Centler, F. (2018):
Intermittent fasting for microbes: how discontinuous feeding increases functional stability in anaerobic digestion
Biotechnol. Biofuels 11 , art. 274
Volltext (DOI)
1700 Centler, F., Dittrich, P. (2007):
Chemical organizations in atmospheric photochemistries - A new method to analyze chemical reaction networks
Planet Space Sci. 55 (4), 413 - 428
Volltext (DOI)
112 Centler, F., Fetzer, I., Thullner, M. (2009):
Modelling bacterial metapopulations
8th German Workshop on Artifical Life - GWAL-8, Leipzig, 3.7.-1.8.2008
p. 73 - 77
11419 Centler, F., Fetzer, I., Thullner, M. (2011):
Modeling population patterns of chemotactic bacteria in homogenous porous media
J. Theor. Biol. 287 , 82 - 91
Volltext (DOI)
22745 Centler, F., Günnigmann, S., Fetzer, I., Wendeberg, A. (2020):
Keystone species and modularity in microbial hydrocarbon degradation uncovered by network analysis and association rule mining
Microorganisms 8 (2), art. 190
Volltext (DOI)
13896 Centler, F., Heße, F., Thullner, M. (2013):
Estimating pathway-specific contributions to biodegradation in aquifers based on dual isotope analysis: theoretical analysis and reactive transport simulations
J. Contam. Hydrol. 152 , 97 - 116
Volltext (DOI)
9859 Centler, F., Kaleta, C., Speroni di Fenizio, P., Dittrich, P. (2010):
A parallel algorithm to compute chemical organizations in biological networks
Bioinformatics 26 (14), 1788 - 1789
Volltext (DOI)
851 Centler, F., Kaleta, C., Speroni di Fenizio, P., Dittrich, P. (2008):
Computing chemical organizations in biological networks
Bioinformatics 24 (14), 1611 - 1618
Volltext (DOI)
9858 Centler, F., Shao, H., De Biase, C., Park, C.-H., Regnier, P., Kolditz, O., Thullner, M. (2010):
GeoSysBRNS-A flexible multidimensional reactive transport model for simulating biogeochemical subsurface processes
Comput. Geosci. 36 (3), 397 - 405
Volltext (DOI)
15774 Centler, F., Thullner, M. (2015):
Chemotactic preferences govern competition and pattern formation in simulated two-strain microbial communities
Front. Microbiol. 6 , art. 40
Volltext (DOI)
17141 Coban, H., Miltner, A., Centler, F., Kästner, M. (2016):
Effects of compost, biochar and manure on carbon mineralization of biogas residues applied to soil
Eur. J. Soil Sci. 67 (2), 217 - 225
Volltext (DOI)
14303 Gharasoo, M., Centler, F., Fetzer, I., Thullner, M. (2014):
How the chemotactic characteristics of bacteria can determine their population patterns
Soil Biol. Biochem. 69 , 346 - 358
Volltext (DOI)
11954 Gharasoo, M., Centler, F., Regnier, P., Harms, H., Thullner, M. (2012):
A reactive transport modeling approach to simulate biogeochemical processes in pore structures with pore-scale heterogeneities
Environ. Modell. Softw. 30 (1), 102 - 114
Volltext (DOI)
16019 Gharasoo, M., Centler, F., van Cappellen, P., Wick, L.Y., Thullner, M. (2015):
Kinetics of substrate biodegradation under the cumulative effects of bioavailability and self-inhibition
Environ. Sci. Technol. 49 (9), 5529 - 5537
Volltext (DOI)
22269 Harnisch, F., Bahnemann, J., Buyel, J., Centler, F., Classen, T., Dohnt, K., Ebert, B.E., Eyer, K., Grünberger, A., Jandt, U., Jung, S., Kara, S., Krujatz, F., Link, H., Regestein, L., Schmid, J., Tischler, D. (2019):
Rechte und Pflichten von akademischen Nachwuchsführungskräften. Stellungnahme des Zukunftsforums Biotechnologie der DECHEMA e.V.
DECHEMA, Frankfurt/Main, 15 S.
Volltext (URL)
20850 Harnisch, F., Blombach, B., Buyel, J., Centler, F., Classen, T., Ebert, B.E., Eyer, C., Dohnt, K., Grünberger, A., Jandt, U., Jung, S., Kara, S., Regestein, L., Schmid, J., Tischler, D., Wierckx, N. (2018):
Revisionsbedürftig? Rechte und Pflichten akademischer Nachwuchsführungskräfte
Forschung & Lehre 25 (9), 788 - 789
11433 Kalbacher, T., Delfs, J.-O., Shao, H., Wang, W., Walther, M., Samaniego, L., Schneider, C., Kumar, R., Musolff, A., Centler, F., Sun, F., Hildebrandt, A., Liedl, R., Borchardt, D., Krebs, P., Kolditz, O. (2012):
The IWAS-ToolBox: software coupling for an integrated water resources management
Environ. Earth Sci. 65 (5), 1367 - 1380
Volltext (DOI)
2755 Kaleta, C., Centler, F., Dittrich, P. (2006):
Analyzing molecular reaction networks. From pathways to chemical organizations
Mol. Biotechnol. 34 (2), 117 - 123
Volltext (DOI)
1082 Kaleta, C., Centler, F., Speroni di Fenizio, P., Dittrich, P. (2008):
Phenotype prediction in regulated metabolic networks
BMC Syst. Biol. 2 , art. 37
Volltext (DOI)
22078 König, S., Köhnke, M.C., Firle, A.-L., Banitz, T., Centler, F., Frank, K., Thullner, M. (2019):
Disturbance size can be compensated for by spatial fragmentation in soil microbial ecosystems
Front. Ecol. Evol. 7 , art. 290
Volltext (DOI)
20490 König, S., Worrich, A., Banitz, T., Centler, F., Harms, H., Kästner, M., Miltner, A., Wick, L.Y., Thullner, M., Frank, K. (2018):
Spatiotemporal disturbance characteristics determine functional stability and collapse risk of simulated microbial ecosystems
Sci. Rep. 8 , art. 9488
Volltext (DOI)
20133 König, S., Worrich, A., Banitz, T., Harms, H., Kästner, M., Miltner, A., Wick, L.Y., Frank, K., Thullner, M., Centler, F. (2018):
Functional resistance to recurrent spatially heterogeneous disturbances is facilitated by increased activity of surviving bacteria in a virtual ecosystem
Front. Microbiol. 9 , art. 734
Volltext (DOI)
18254 König, S., Worrich, A., Centler, F., Wick, L.Y., Miltner, A., Kästner, M., Thullner, M., Frank, K., Banitz, T. (2017):
Modelling functional resilience of microbial ecosystems: Analysis of governing processes
Environ. Modell. Softw. 89 , 31 - 39
Volltext (DOI)
4271 Kremling, A., Heermann, R., Centler, F., Jung, K., Gilles, E.D. (2004):
Analysis of two-component signal transduction by mathematical modeling using the KdpD/KdpE system of Escherichia coli
Biosystems 78 (1-3), 23 - 37
Volltext (DOI)
13521 Leibeling, S., Maeß, M.B., Centler, F., Kleinsteuber, S., von Bergen, M., Thullner, M., Harms, H., Müller, R.H. (2013):
Posttranslational oxidative modification of (R)-2-(2,4-dichlorophenoxy)propionate/α-ketoglutarate-dependent dioxygenases (RdpA) leads to improved degradation of 2,4-dichlorophenoxyacetate (2,4-D)
Eng. Life Sci. 13 (3), 278 - 291
Volltext (DOI)
22892 Liu, B., Kleinsteuber, S., Centler, F., Harms, H., Sträuber, H. (2020):
Competition between butyrate fermenters and chain-elongating bacteria limits the efficiency of medium-chain carboxylate production
Front. Microbiol. 11 , art. 336
Volltext (DOI)
20078 Liu, Z., Cichocki, N., Bonk, F., Günther, S., Schattenberg, F., Harms, H., Centler, F., Müller, S. (2018):
Ecological stability properties of microbial communities assessed by flow cytometry
mSphere 3 (1), e00564-17
Volltext (DOI)
2050 Matsumaru, N., Centler, F., di Fenizio, P.S., Dittrich, P. (2007):
Chemical organization theory as a theoretical base for chemical computing
Int. J. Unconv. Comput. 3 (4), 285 - 309
4334 Matsumaru, N., Centler, F., Zauner, K.P., Dittrich, P. (2004):
Self-adaptive scouting - Autonomous experimentation for systems biology
In: Raidl, G.R., Cagnoni, S., Branke, J., Wolfe Corne, D., Drechsler, R., Jin, Y., Johnson, C.G., Machado, P., Marchiori, E., Rothlauf, F., Smith, G.D., Squillero, G. (eds.)
Applications of evolutionary computing
Lect. Notes Comput. Sci. 3005
Springer, Berlin, Heidelberg, New York, p. 52 - 62
Volltext (DOI)
1215 Matsumaru, N., Lenser, T., Centler, F., di Fenizio, P.S., Hinze, T., Dittrich, P. (2008):
Common organizational structures within two chemical flip-flops
In: Suzuki, Y., Adamazky, A., Hagiya, M., Umeo, H. (eds.)
Natural Computing. Proceedings Third International Workshop on Natural Computing ()
Japan Society for Artificial Intelligence, p. 50 - 59
13301 Nick, H.M., Raoof, A., Centler, F., Thullner, M., Regnier, P. (2013):
Reactive dispersive contaminant transport in coastal aquifers: Numerical simulation of a reactive Henry problem
J. Contam. Hydrol. 145 , 90 - 104
Volltext (DOI)
23222 Popp, D., Centler, F. (2020):
μBialSim: Constraint-based dynamic simulation of complex microbiomes
Front. Bioeng. Biotechnol. 8 , art. 574
Volltext (DOI)
16815 Richter, S., Fetzer, I., Thullner, M., Centler, F., Dittrich, P. (2015):
Towards rule-based metabolic databases: a requirement analysis based on KEGG
Int. J. Data Min. Bioinform. 13 (3), 289 - 319
Volltext (DOI)
620 Shao, H., Centler, F., De Biase, C., Thullner, M., Kolditz, O. (2009):
Comments on "Two-dimensional concentration distribution for mixing-controlled bioreactive transport in steady-state" by O.A. Cirpka and A.J. Valocchi
Adv. Water Resour. 32 (2), 293 - 297
Volltext (DOI)
11940 Thullner, M., Centler, F., Richnow, H.-H., Fischer, A. (2012):
Quantification of organic pollutant degradation in contaminated aquifers using compound specific stable isotope analysis – Review of recent developments
Org. Geochem. 42 (12), 1440 - 1460
Volltext (DOI)
21861 Weinrich, S., Koch, S., Bonk, F., Popp, D., Benndorf, D., Klamt, S., Centler, F. (2019):
Augmenting biogas process modeling by resolving intracellular metabolic activity
Front. Microbiol. 10 , art. 1095
Volltext (DOI)
18173 Wintsche, B., Glaser, K., Sträuber, H., Centler, F., Liebetrau, J., Harms, H., Kleinsteuber, S. (2016):
Trace elements induce predominance among methanogenic activity in anaerobic digestion
Front. Microbiol. 7 , art. 2034
Volltext (DOI)
17690 Worrich, A., König, S., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Miltner, A., Wick, L.Y., Kaestner, M. (2016):
Bacterial dispersal promotes biodegradation in heterogeneous systems exposed to osmotic stress
Front. Microbiol. 7 , art. 1214
Volltext (DOI)
17165 Worrich, A., König, S., Miltner, A., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Kästner, M., Wick, L.Y. (2016):
Mycelium-like networks increase bacterial dispersal, growth, and biodegradation in a model ecosystem at various water potentials
Appl. Environ. Microb. 82 (10), 2902 - 2908
Volltext (DOI)
18876 Worrich, A., Stryhanyuk, H., Musat, N., König, S., Banitz, T., Centler, F., Frank, K., Thullner, M., Harms, H., Richnow, H.-H., Miltner, A., Kästner, M., Wick, L.Y. (2017):
Mycelium-mediated transfer of water and nutrients stimulates bacterial activity in dry and oligotrophic environments
Nat. Commun. 8 , art. 15472
Volltext (DOI)
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